{
  "access": {
    "embargo": {
      "active": false,
      "reason": null
    },
    "files": "public",
    "record": "public",
    "status": "open"
  },
  "created": "2022-01-12T10:29:27.142868+00:00",
  "custom_fields": {},
  "deletion_status": {
    "is_deleted": false,
    "status": "P"
  },
  "files": {
    "count": 1,
    "enabled": true,
    "entries": {
      "BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf": {
        "access": {
          "hidden": false
        },
        "checksum": "md5:8994dcfad8f2dd9482ebca085ae38ad0",
        "ext": "pdf",
        "id": "a50ddd85-54e2-4dcc-af61-ad53ffa7b7b2",
        "key": "BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf",
        "links": {
          "content": "https://zenodo.org/api/records/5840055/files/BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf/content",
          "iiif_api": "https://zenodo.org/api/iiif/record:5840055:BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf/full/full/0/default.png",
          "iiif_base": "https://zenodo.org/api/iiif/record:5840055:BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf",
          "iiif_canvas": "https://zenodo.org/api/iiif/record:5840055/canvas/BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf",
          "iiif_info": "https://zenodo.org/api/iiif/record:5840055:BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf/info.json",
          "self": "https://zenodo.org/api/records/5840055/files/BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf"
        },
        "metadata": null,
        "mimetype": "application/pdf",
        "size": 1464092,
        "storage_class": "L"
      }
    },
    "order": [],
    "total_bytes": 1464092
  },
  "id": "5840055",
  "is_draft": false,
  "is_published": true,
  "links": {
    "access": "https://zenodo.org/api/records/5840055/access",
    "access_grants": "https://zenodo.org/api/records/5840055/access/grants",
    "access_links": "https://zenodo.org/api/records/5840055/access/links",
    "access_request": "https://zenodo.org/api/records/5840055/access/request",
    "access_users": "https://zenodo.org/api/records/5840055/access/users",
    "archive": "https://zenodo.org/api/records/5840055/files-archive",
    "archive_media": "https://zenodo.org/api/records/5840055/media-files-archive",
    "communities": "https://zenodo.org/api/records/5840055/communities",
    "communities-suggestions": "https://zenodo.org/api/records/5840055/communities-suggestions",
    "doi": "https://doi.org/10.5281/zenodo.5840055",
    "draft": "https://zenodo.org/api/records/5840055/draft",
    "file_modification": "https://zenodo.org/api/records/5840055/file-modification",
    "files": "https://zenodo.org/api/records/5840055/files",
    "latest": "https://zenodo.org/api/records/5840055/versions/latest",
    "latest_html": "https://zenodo.org/records/5840055/latest",
    "media_files": "https://zenodo.org/api/records/5840055/media-files",
    "parent": "https://zenodo.org/api/records/5840054",
    "parent_doi": "https://doi.org/10.5281/zenodo.5840054",
    "parent_doi_html": "https://zenodo.org/doi/10.5281/zenodo.5840054",
    "parent_html": "https://zenodo.org/records/5840054",
    "preview_html": "https://zenodo.org/records/5840055?preview=1",
    "quota_increase": "https://zenodo.org/api/records/5840055/quota-increase",
    "request_deletion": "https://zenodo.org/api/records/5840055/request-deletion",
    "requests": "https://zenodo.org/api/records/5840055/requests",
    "reserve_doi": "https://zenodo.org/api/records/5840055/draft/pids/doi",
    "self": "https://zenodo.org/api/records/5840055",
    "self_doi": "https://doi.org/10.5281/zenodo.5840055",
    "self_doi_html": "https://zenodo.org/doi/10.5281/zenodo.5840055",
    "self_html": "https://zenodo.org/records/5840055",
    "self_iiif_manifest": "https://zenodo.org/api/iiif/record:5840055/manifest",
    "self_iiif_sequence": "https://zenodo.org/api/iiif/record:5840055/sequence/default",
    "thumbnails": {
      "10": "https://zenodo.org/api/iiif/record:5840055:BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf/full/%5E10,/0/default.jpg",
      "100": "https://zenodo.org/api/iiif/record:5840055:BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf/full/%5E100,/0/default.jpg",
      "1200": "https://zenodo.org/api/iiif/record:5840055:BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf/full/%5E1200,/0/default.jpg",
      "250": "https://zenodo.org/api/iiif/record:5840055:BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf/full/%5E250,/0/default.jpg",
      "50": "https://zenodo.org/api/iiif/record:5840055:BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf/full/%5E50,/0/default.jpg",
      "750": "https://zenodo.org/api/iiif/record:5840055:BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf/full/%5E750,/0/default.jpg"
    },
    "versions": "https://zenodo.org/api/records/5840055/versions"
  },
  "media_files": {
    "count": 1,
    "enabled": true,
    "entries": {
      "BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf.ptif": {
        "access": {
          "hidden": true
        },
        "ext": "ptif",
        "id": "2dd84b07-1bd5-4062-9975-8b85b33ef0de",
        "key": "BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf.ptif",
        "links": {
          "content": "https://zenodo.org/api/records/5840055/files/BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf.ptif/content",
          "self": "https://zenodo.org/api/records/5840055/files/BioExcel-2_D6.3-High_performance_computing_in_support_of_COVID-19_research.pdf.ptif"
        },
        "metadata": null,
        "mimetype": "application/octet-stream",
        "processor": {
          "source_file_id": "a50ddd85-54e2-4dcc-af61-ad53ffa7b7b2",
          "status": "finished",
          "type": "image-tiles"
        },
        "size": 0,
        "storage_class": "L"
      }
    },
    "order": [],
    "total_bytes": 0
  },
  "metadata": {
    "additional_descriptions": [
      {
        "description": "Deliverable will be published after it is accepted by the funding agency.",
        "type": {
          "id": "notes",
          "title": {
            "de": "Anmerkungen",
            "en": "Notes"
          }
        }
      }
    ],
    "creators": [
      {
        "affiliations": [
          {
            "name": "KTH"
          }
        ],
        "person_or_org": {
          "family_name": "Rossen Apostolov",
          "name": "Rossen Apostolov",
          "type": "personal"
        }
      },
      {
        "affiliations": [
          {
            "name": "UU"
          }
        ],
        "person_or_org": {
          "family_name": "Alexandre Bonvin",
          "name": "Alexandre Bonvin",
          "type": "personal"
        }
      },
      {
        "affiliations": [
          {
            "name": "JYU"
          }
        ],
        "person_or_org": {
          "family_name": "Dmitry Morozov",
          "name": "Dmitry Morozov",
          "type": "personal"
        }
      },
      {
        "affiliations": [
          {
            "name": "UNIMAN"
          }
        ],
        "person_or_org": {
          "family_name": "Stian Soiland-Reyes",
          "name": "Stian Soiland-Reyes",
          "type": "personal"
        }
      },
      {
        "affiliations": [
          {
            "name": "IRB"
          }
        ],
        "person_or_org": {
          "family_name": "Adam Hospital",
          "name": "Adam Hospital",
          "type": "personal"
        }
      },
      {
        "affiliations": [
          {
            "name": "MPG"
          }
        ],
        "person_or_org": {
          "family_name": "Bert de Groot",
          "name": "Bert de Groot",
          "type": "personal"
        }
      }
    ],
    "description": "<p>The unexpected emergence and spread of the SARS-CoV-2 virus and COVID-19 disease had a dramatic impact on societies across the world. Very soon it became clear that concerted efforts are needed in the fight against the pandemic.</p>\n\n<p>As a focal point for the computational biomolecular research communities in Europe, BioExcel restructured its efforts in support of addressing the crisis. We developed and launched a number of portals for COVID-19 related data management and analysis. High-priority access to compute resources was provided by partner HPC centers.</p>\n\n<p>We started numerous collaborative research projects including close partnerships with pharma industry. Community support was extended. We participated in dedicated webinars and presentations to cover methodologies, experience and results from our work.</p>\n\n<p>We added a dedicated section to our website under category Research (<a href=\"https://bioexcel.eu/covid-19-research/\">https://bioexcel.eu/covid-19-research/</a>) to present the various services and activities related to the disease. In this document we summarize the aforementioned activities.</p>",
    "funding": [
      {
        "award": {
          "acronym": "BioExcel-2",
          "id": "00k4n6c32::823830",
          "identifiers": [
            {
              "identifier": "https://cordis.europa.eu/projects/823830",
              "scheme": "url"
            }
          ],
          "number": "823830",
          "program": "H2020-EU.1.4.",
          "title": {
            "en": "BioExcel Centre of Excellence for ComputationalBiomolecular Research"
          }
        },
        "funder": {
          "id": "00k4n6c32",
          "name": "European Commission"
        }
      }
    ],
    "publication_date": "2021-12-31",
    "publisher": "Zenodo",
    "related_identifiers": [
      {
        "identifier": "https://bioexcel.eu/covid-19-research/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://covid.bioexcel.eu/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://covid.molssi.org/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://about.workflowhub.eu/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://covid19.workflowhub.eu/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://elixir-europe.org/news/hacking-pandemic",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://elixir-europe.org/news/hacking-pandemic",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://covid19.galaxyproject.org/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://fairsharing.org/biodbcore-001581/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://www.covid19dataportal.org/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://about.workflowhub.eu/fair-computational-workflows/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://lifemonitor.eu/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://bioschemas.org/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://www.ga4gh.org/work_stream/cloud/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "http://w3id.org/ro/crate/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://www.commonwl.org/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "10.5281/zenodo.5511704",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-deliverable",
          "title": {
            "de": "Projektergebnis",
            "en": "Project deliverable"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "10.5281/zenodo.4605654",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-workingpaper",
          "title": {
            "de": "Arbeitspapier",
            "en": "Working paper"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "10.1038/s41431-020-0637-5",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-article",
          "title": {
            "de": "Zeitschriftenartikel",
            "en": "Journal article"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "https://by-covid.org/news-events/by-covid-launch/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://by-covid.org/about#partners",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://sbnb.irbbarcelona.org/covid19/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://bioexcel-cv19.bsc.es/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://bioexcel-cv19.bsc.es/#/browse/MCV1900002/trajectory",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "resource_type": {
          "id": "dataset",
          "title": {
            "de": "Datensatz",
            "en": "Dataset"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://wenmr.science.uu.nl/haddock2.4/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "resource_type": {
          "id": "publication-softwaredocumentation",
          "title": {
            "de": "Softwaredokumentation",
            "en": "Software documentation"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "10.5281/zenodo.5511684",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-deliverable",
          "title": {
            "de": "Projektergebnis",
            "en": "Project deliverable"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "https://www.deshawresearch.com/downloads/download_trajectory_sarscov2.cgi/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "10.1021/jacs.1c05301",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-article",
          "title": {
            "de": "Zeitschriftenartikel",
            "en": "Journal article"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "https://github.com/bioexcel/pmxlaunchCV19",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "10.5281/zenodo.4604924",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-deliverable",
          "title": {
            "de": "Projektergebnis",
            "en": "Project deliverable"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "https://prace-ri.eu/prace-support-to-mitigate-impact-of-covid-19-pandemic/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://github.com/MolSSI/covid",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "resource_type": {
          "id": "software",
          "title": {
            "de": "Software",
            "en": "Software"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://www.bonvinlab.org/covid",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "http://www.bonvinlab.org/software",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "resource_type": {
          "id": "publication-softwaredocumentation",
          "title": {
            "de": "Softwaredokumentation",
            "en": "Software documentation"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "10.1007/s10822-018-0148-4",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-article",
          "title": {
            "de": "Zeitschriftenartikel",
            "en": "Journal article"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "https://www.eyesopen.com/omega",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "resource_type": {
          "id": "publication-softwaredocumentation",
          "title": {
            "de": "Softwaredokumentation",
            "en": "Software documentation"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "10.1021/ci100031x",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-article",
          "title": {
            "de": "Zeitschriftenartikel",
            "en": "Journal article"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "https://www.rcsb.org/structure/6y2f",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "10.1126/science.abb3405",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-article",
          "title": {
            "de": "Zeitschriftenartikel",
            "en": "Journal article"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "https://www.imi-care.eu/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://www.youtube.com/watch?v=8VJorSqIc2Q",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "resource_type": {
          "id": "video",
          "title": {
            "de": "Video/Audio",
            "en": "Video/Audio"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "10.1007/s10822-018-0148-4",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-article",
          "title": {
            "de": "Zeitschriftenartikel",
            "en": "Journal article"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "10.1021/acs.jcim.1c00796",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-article",
          "title": {
            "de": "Zeitschriftenartikel",
            "en": "Journal article"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "10.1101/2021.04.14.439284",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-workingpaper",
          "title": {
            "de": "Arbeitspapier",
            "en": "Working paper"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "https://www.exscalate4cov.eu/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "10.5281/zenodo.5511717",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-deliverable",
          "title": {
            "de": "Projektergebnis",
            "en": "Project deliverable"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "https://www.cecam.org/webinars-categories/hpc",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://www.cecam.org/webinar-details/prof-erik-lindhal-stockholm-university-prof-francesco-stellacci-epfl",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://fenix-ri.eu/events/9th-fenix-infrastructure-webinar-using-icei-resources-atomistic-molecular-dynamics",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://www.cecam.org/webinars-categories/covid",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://sites.google.com/view/icsp-online/events",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://euraxess.ec.europa.eu/worldwide/asean/eu-asean-hpc-initiative-fighting-covid-19-together",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "10.5281/zenodo.4633655",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "https://www.gla.ac.uk/research/az/scrc/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://scb.iec.cat/covid-19-viii-jornada-de-bioinformatica-i-genomica/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://www.escience2021.org/keynotes",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://sourceryinstitute.github.io/PAW/#Program",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://www.cecam.org/workshop-details/52",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://www.cecam.org/workshop-details/1078",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://bioexcel.eu/events/bioexcel-summer-school-on-biomolecular-simulations-2020/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://www.youtube.com/watch?v=9IYsPH6iaw4&list=PLzLqYW5ci-2fhyTarjhpST9JT6qLTwBfL&index=15",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "resource_type": {
          "id": "video",
          "title": {
            "de": "Video/Audio",
            "en": "Video/Audio"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://elixir-europe.org/news/hacking-pandemic",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://bioexcel.eu/covid-19-research/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://instruct-eric.eu/haddock-screen-of-2000-approved-drugs-for-covid19",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://bioexcel.eu/category/webinar/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://bioexcel.eu/webinar-summerschool-2021/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://bioexcel.eu/webinar-covid-19-molecular-structure-and-therapeutics-hub-2020-06-25/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://bioexcel.eu/webinar-computationally-designing-therapeutic-antibodies-combining-immune-repertoire-data-and-structural-information-2021-11-09/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://bioexcel.eu/bioexcel-center-of-excellence-in-support-of-covid-19-research/",
        "relation_type": {
          "id": "references",
          "title": {
            "de": "Referenziert",
            "en": "References"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "10.1101/2020.06.21.163592",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-workingpaper",
          "title": {
            "de": "Arbeitspapier",
            "en": "Working paper"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "10.1101/2021.12.05.471263",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-workingpaper",
          "title": {
            "de": "Arbeitspapier",
            "en": "Working paper"
          }
        },
        "scheme": "doi"
      },
      {
        "identifier": "10.1021/acs.jcim.0c00319",
        "relation_type": {
          "id": "cites",
          "title": {
            "de": "Zitiert",
            "en": "Cites"
          }
        },
        "resource_type": {
          "id": "publication-article",
          "title": {
            "de": "Zeitschriftenartikel",
            "en": "Journal article"
          }
        },
        "scheme": "doi"
      }
    ],
    "resource_type": {
      "id": "publication-deliverable",
      "title": {
        "de": "Projektergebnis",
        "en": "Project deliverable"
      }
    },
    "rights": [
      {
        "description": {
          "en": "The Creative Commons Attribution license allows re-distribution and re-use of a licensed work on the condition that the creator is appropriately credited."
        },
        "icon": "cc-by-icon",
        "id": "cc-by-4.0",
        "props": {
          "scheme": "spdx",
          "url": "https://creativecommons.org/licenses/by/4.0/legalcode"
        },
        "title": {
          "en": "Creative Commons Attribution 4.0 International"
        }
      }
    ],
    "title": "BioExcel-2 Deliverable 6.3 \u2013 High Performance Computing in support of COVID-19 Research",
    "version": "0.6"
  },
  "parent": {
    "access": {
      "owned_by": {
        "user": "4363"
      }
    },
    "communities": {
      "entries": [
        {
          "access": {
            "member_policy": "open",
            "members_visibility": "public",
            "record_submission_policy": "open",
            "review_policy": "open",
            "visibility": "public"
          },
          "children": {
            "allow": false
          },
          "created": "2020-03-16T11:40:44.487619+00:00",
          "custom_fields": {},
          "deletion_status": {
            "is_deleted": false,
            "status": "P"
          },
          "id": "10f33f78-3f29-41b6-bb10-f757a8f03cb8",
          "links": {},
          "metadata": {
            "curation_policy": "<p>The Coronavirus Disease Research Community - COVID-19 is curated by a selected team of experts nominated by <a href=\"http://www.openaire.eu\"><strong>OpenAIRE</strong></a>* (see list below). Each time a Zenodo user wants to add a record into the community, an email is sent to the curators that will decide whether to include the record or not.</p>\r\n\r\n<p>Only records that may be relevant to the Corona Virus Disease (COVID-19) or the SARS-CoV-2 should be included in this community. The Community curators are not able to edit records, therefore they may ask the corresponding authors to modify the record metadata when necessary, to provide the readers/users with more detailed information according to the FAIR principle of Open Science.</p>\r\n\r\n<p>If after its acceptance, a record is subsequently found not to be compliant, we reserve the right to remove it from the community.</p>\r\n\r\n<p>The curation team is reachable through the following email address for further clarification or information: <a href=\"mailto:covid19@openaire.eu\">covid19@openaire.eu</a>.</p>\r\n\r\n<p><strong>Curator&nbsp;List:</strong></p>\r\n\r\n<ul>\r\n\t<li>Ilaria Fava, UGOE, Germany;</li>\r\n\t<li>Emma Lazzeri, CNR, Italy;</li>\r\n\t<li>Alessia Bardi, CNR, Italy;</li>\r\n\t<li>Iryna Kuchma, EIFL, Ukraine;</li>\r\n\t<li>Paolo Manghi, CNR, Italy;</li>\r\n\t<li>Wolfram Horstmann, UGOE, Germany.</li>\r\n</ul>\r\n\r\n<p>* <a href=\"http://www.openaire.eu\"><strong>OpenAIRE</strong></a>: open access and open science training and support since 2009. OpenAIRE is the largest aggregator of European Commission funded research outputs and beyond, also delivering on-demand services for research communities.</p>\r\n",
            "page": "<p>This community collects research outputs that may be relevant to the Coronavirus Disease (COVID-19) or the SARS-CoV-2. Scientists are encouraged to upload their outcome in this collection to facilitate sharing and discovery of information. Although Open Access articles and datasets are recommended, also closed and restricted access material are accepted. All types of research outputs can be included in this Community (Publication, Poster, Presentation, Dataset, Image, Video/Audio, Software, Lesson, Other).</p>\r\n\r\n<p>The recent Corona Virus Disease (COVID-19) outbreak is requiring unseen efforts of collaboration of the scientific community that need to act fast and to share results in an unpredictable manner. In order to facilitate the Scientist efforts, this community was created to collect all research results that could be relevant for the scientific community working on the Corona Virus Disease (COVID-19) and SARS-CoV-2.</p>\r\n\r\n<p>Although Open Access articles and datasets are recommended, also closed and restricted access material are accepted. All types of research outputs can be included in this Community (Publication, Poster, Presentation, Dataset, Image, Video/Audio, Software, Lesson, Other).</p>\r\n\r\n<p>When depositing a resource that is linked to other resources (not limited to the records deposited in Zenodo but also in other repositories), please make sure that your record is linked to all the other related elements already available, in order to adhere to the FAIR principles of Open Science to maximise the reusability of research results.</p>\r\n\r\n<p>&nbsp;</p>",
            "title": "Coronavirus Disease Research Community - COVID-19"
          },
          "revision_id": 0,
          "slug": "covid-19",
          "updated": "2021-02-23T14:39:53.029415+00:00"
        },
        {
          "access": {
            "member_policy": "open",
            "members_visibility": "restricted",
            "record_submission_policy": "open",
            "review_policy": "closed",
            "visibility": "public"
          },
          "children": {
            "allow": true
          },
          "created": "2022-11-23T15:53:29.436323+00:00",
          "custom_fields": {},
          "deletion_status": {
            "is_deleted": false,
            "status": "P"
          },
          "id": "f0a8b890-f97a-4eb2-9eac-8b8a712d3a6c",
          "links": {},
          "metadata": {
            "curation_policy": "<h2>Curation policy</h2>\n<p>The EU Open Research Repository serves as a repository for research outputs (data, software, posters, presentations, publications, etc) which have been funded under an EU research funding programme such as Horizon Europe, Euratom or earlier Framework Programmes.</p>\n<p>The community is managed by CERN on behalf of the European Commission.&nbsp;</p>\n<p><a href=\"https://about.zenodo.org/policies/\">Zenodo&rsquo;s general policies</a> and <a href=\"https://about.zenodo.org/terms/\">Terms of Use</a> apply to all content.</p>\n<h3>Scope</h3>\n<p>The EU Open Research Repository accepts all digital research objects which is a research output stemming from one of EU&rsquo;s research and innovation funding programmes. The funding programmes currently include:</p>\n<ul>\n<li>\n<p>Horizon Europe (including ERC, MSCA), earlier Framework Programmes (eg Horizon 2020) as well as Euratom.</p>\n</li>\n</ul>\n<p>In line with the principle as open as possible, as closed as necessary both public and restricted content is accepted. See note on how <a href=\"https://about.zenodo.org/infrastructure/\">Zenodo handles restricted content</a>.</p>\n<h3>Content submission</h3>\n<p>EU programme beneficiaries are eligible to submit content to the community. The community supports three types of content submissions:</p>\n<ul>\n<li>\n<p>Submission via an EU Project Community (through user interface or programmatic APIs).</p>\n</li>\n<li>\n<p>Submission directly to the EU Open Research Repository.</p>\n</li>\n<li>\n<p>Automated harvesting from existing Zenodo content.</p>\n</li>\n</ul>\n<h4>Project community (preferred)</h4>\n<p>A representative of an EU project may request an EU Project Community and invite other project participants as members of the community. The project community is linked to one or more European Commission grants. All records in the project community are automatically integrated into the EU Open Research Repository immediately upon acceptance into the project community.&nbsp;</p>\n<h4>Direct submission</h4>\n<p>Any user may submit a record directly to the EU Open Research Repository. The submission will be moderated by Zenodo staff for compliance with the minimal required metadata requirements and its correctness.</p>\n<h4>Automated harvesting</h4>\n<p>Records found among Zenodo&rsquo;s existing content will on a regular basis automatically be integrated if they are found to comply with the requirements. The submissions through this method are integrated into the EU Open Research Repository with delay in a fully automated way.</p>\n<h3>Descriptive information</h3>\n<h4>Minimal metadata requirements</h4>\n<p>Records in the EU Open Research Repository are required to comply with the following minimal metadata requirements:</p>\n<ul>\n<li>\n<p>Visibility: Both public and restricted (with or without embargo and/or access request)</p>\n</li>\n<li>\n<p>Resource types: All resource types.</p>\n</li>\n<li>\n<p>Licenses: Public and embargoed records MUST specify a license. The chosen license SHOULD be compliant with the Horizon Europe open science requirements (see <a href=\"/communities/eu/pages/open-science\">Open Science in Horizon Europe</a>)</p>\n</li>\n<li>\n<p>Funding information: Records MUST specify at least one grant from the European Commission.</p>\n</li>\n<li>Journal articles: Records MUST specify at the publishing venue (e.g. the journal the article was published in).</li>\n<li>\n<p>Creators: Creators SHOULD be identified with a persistent identifier (e.g. ORCID, GND, &hellip;), and affiliations SHOULD be identified with a persistent identifier (e.g. ROR, ISNI, &hellip;)</p>\n</li>\n<li>\n<p>Subjects: Records SHOULD specify one or more fields of science from the <a href=\"https://op.europa.eu/en/web/eu-vocabularies/euroscivoc\">European Science Vocabulary</a>.</p>\n</li>\n</ul>\n<p>These metadata requirements comes from the related open science requirements in Horizon Europe which are detailed in each project's grant agreement.</p>\n<h3>Review &amp; moderation</h3>\n<p>All submissions undergo automated curation checks for compliance with the policy. Submissions through project communities are in addition reviewed by the project community. Submission directly to the EU Open Research Repository is in addiotn reviewed by Zenodo staff.</p>\n<p>Community curators may at any point edit metadata of the records in the community without notice through human or automated processing. The curators may at their sole discretion remove records from the community that are deemed not to comply with the content and curation policy or which are deemed of insufficient quality.</p>\n<h3>Updates</h3>\n<p>The content and curation policy is subject to change by the community owner at any time and without notice, other than through updating this page.</p>",
            "description": "Open repository for EU-funded research outputs from Horizon Europe, Euratom, and earlier Framework Programmes.",
            "funding": [
              {
                "funder": {
                  "id": "00k4n6c32"
                }
              }
            ],
            "organizations": [
              {
                "id": "00k4n6c32"
              }
            ],
            "page": "<h2>About</h2>\n<p>The EU Open Research Repository is a Zenodo-community dedicated to fostering open science and enhancing the visibility and accessibility of research outputs funded by the European Union. The community is managed by CERN on behalf of the European Commission.</p>\n<h3>Mission</h3>\n<p>The mission of the repository is to support the implementation of the EU's open science policy, providing a trusted and comprehensive space for researchers to share their research outputs such as data, software, reports, presentations, posters and more. The EU Open Research Repository simplifies the process of complying with open science requirements, ensuring that research outputs from Horizon Europe, Euratom, and earlier Framework Programmes are freely accessible, thereby accelerating scientific discovery and innovation.</p>\n<h3>EU Open Research Repository vs Open Research Europe (ORE)</h3>\n<p>The EU Open Research Repository serves as a complementary platform to the <a href=\"https://open-research-europe.ec.europa.eu/\">Open Research Europe</a> (ORE) publishing platform. Open Research Europe focuses on providing a publishing venue for peer-reviewed articles, ensuring that research meets rigorous academic standards. The EU Open Research Repository provides a space for all the other research outputs including data sets, software, posters, and presentations that are out of scope for ORE. This holistic approach enables researchers to not only publish their findings but also share the underlying data and materials that support their work, fostering transparency and reproducibility in the scientific process.&nbsp;</p>\n<h3>Funding</h3>\n<p>The EU Open Research Repository is funded by the European Union under grant agreement no. <a href=\"https://cordis.europa.eu/project/id/101256740\">101256740</a>&nbsp; (HORIZON-ZEN Plus). For more information about the project see <a href=\"https://about.zenodo.org/projects/horizon-zen-plus/\">https://about.zenodo.org/projects/horizon-zen/.</a></p>",
            "title": "EU Open Research Repository",
            "type": {
              "id": "organization"
            },
            "website": "https://research-and-innovation.ec.europa.eu"
          },
          "revision_id": 24,
          "slug": "eu",
          "theme": {
            "brand": "horizon",
            "enabled": true,
            "style": {
              "font": {
                "family": "Arial, sans-serif",
                "size": "16px",
                "weight": 600
              },
              "mainHeaderBackgroundColor": "#FFFFFF",
              "primaryColor": "#004494",
              "primaryTextColor": "#FFFFFF",
              "secondaryColor": "#FFD617",
              "secondaryTextColor": "#000000",
              "tertiaryColor": "#e3eefd",
              "tertiaryTextColor": "#1c5694"
            }
          },
          "updated": "2026-03-31T12:29:43.596724+00:00"
        },
        {
          "access": {
            "member_policy": "open",
            "members_visibility": "public",
            "record_submission_policy": "open",
            "review_policy": "open",
            "visibility": "public"
          },
          "children": {
            "allow": false
          },
          "created": "2016-09-16T09:22:02.863128+00:00",
          "custom_fields": {},
          "deletion_status": {
            "is_deleted": false,
            "status": "P"
          },
          "id": "fe037ff6-6dac-4d56-afde-704f1f800893",
          "links": {},
          "metadata": {
            "description": "The leading European Centre of Excellence for Computational Biomolecular Research. Established in 2015, the centre has grown into a major research and innovation hub for scientific computing.",
            "funding": [
              {
                "award": {
                  "id": "00k4n6c32::823830"
                },
                "funder": {
                  "id": "00k4n6c32"
                }
              },
              {
                "award": {
                  "id": "00k4n6c32::675728"
                },
                "funder": {
                  "id": "00k4n6c32"
                }
              },
              {
                "award": {
                  "id": "00k4n6c32::101093290"
                },
                "funder": {
                  "id": "00k4n6c32"
                }
              }
            ],
            "page": "<p>BioExcel (www.bioexcel.eu) is the leading European Centre of Excellence for computational biomolecular research. We develop world-class applications for modelling and simulations; methods for extreme scaling on modern supercomputing architectures; user-friendly automation workflows and extensive program for training and support of academic and industrial researchers in the use of <em>high-performance computing</em> (HPC) and <em>high-throughput computing</em> (HTC) in biomolecular research.</p>\n\n<p>BioExcel is funded by the European Union Horizon 2020 program under grant agreements 823830, 675728.</p>",
            "title": "BioExcel Centre of Excellence for Computational Biomolecular Research",
            "type": {
              "id": "organization"
            },
            "website": "https://bioexcel.eu"
          },
          "revision_id": 1,
          "slug": "bioexcel",
          "updated": "2023-11-03T17:08:06.861102+00:00"
        }
      ],
      "ids": [
        "10f33f78-3f29-41b6-bb10-f757a8f03cb8",
        "f0a8b890-f97a-4eb2-9eac-8b8a712d3a6c",
        "fe037ff6-6dac-4d56-afde-704f1f800893"
      ]
    },
    "id": "5840054",
    "pids": {
      "doi": {
        "client": "datacite",
        "identifier": "10.5281/zenodo.5840054",
        "provider": "datacite"
      }
    }
  },
  "pids": {
    "doi": {
      "client": "datacite",
      "identifier": "10.5281/zenodo.5840055",
      "provider": "datacite"
    },
    "oai": {
      "identifier": "oai:zenodo.org:5840055",
      "provider": "oai"
    }
  },
  "revision_id": 10,
  "stats": {
    "all_versions": {
      "data_volume": 163978304.0,
      "downloads": 112,
      "unique_downloads": 106,
      "unique_views": 377,
      "views": 393
    },
    "this_version": {
      "data_volume": 163978304.0,
      "downloads": 112,
      "unique_downloads": 106,
      "unique_views": 376,
      "views": 392
    }
  },
  "status": "published",
  "swh": {},
  "updated": "2024-07-17T11:35:03.200490+00:00",
  "versions": {
    "index": 1,
    "is_latest": true
  }
}