ClusteringAnalysis.zip
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ClaudinScreen
.Rhistory
0 Bytes
ClaudinScreen_Description.docx
177.5 kB
MeshClass.csv
304 Bytes
clustering_cleaned.R
2.2 kB
environment.yml
5.5 kB
glcm_crop_new.py
4.1 kB
output
1
200604_Y1_647N.lif - Series001 - C=1glcm.tif
9.7 kB
200604_Y1_647N.lif - Series002 - C=1glcm.tif
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200604_Y1_647N.lif - Series003 - C=1glcm.tif
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200604_Y1_647N.lif - Series004 - C=1glcm.tif
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200604_Y1_647N.lif - Series005 - C=1glcm.tif
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200604_Y1_647N.lif - Series006 - C=1glcm.tif
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200604_Y1_647N.lif - Series007 - C=1glcm.tif
12.9 kB
200604_Y1_647N.lif - Series008 - C=1glcm.tif
10.1 kB
18-2
200604_Y18-2_647N.lif - Series001 - C=1glcm.tif
10.9 kB
200604_Y18-2_647N.lif - Series002 - C=1glcm.tif
9.6 kB
200604_Y18-2_647N.lif - Series003 - C=1glcm.tif
10.0 kB
200604_Y18-2_647N.lif - Series004 - C=1glcm.tif
9.7 kB
200604_Y18-2_647N.lif - Series005 - C=1glcm.tif
8.8 kB
screen
1
200604_Y1_647N.lif - Series001 - C=1.tif
1.8 MB
200604_Y1_647N.lif - Series001 - C=1_crop.tif
763.9 kB
200604_Y1_647N.lif - Series002 - C=1.tif
1.8 MB
200604_Y1_647N.lif - Series002 - C=1_crop.tif
763.9 kB
200604_Y1_647N.lif - Series003 - C=1.tif
1.8 MB
200604_Y1_647N.lif - Series003 - C=1_crop.tif
763.9 kB
200604_Y1_647N.lif - Series004 - C=1.tif
1.8 MB
200604_Y1_647N.lif - Series004 - C=1_crop.tif
763.9 kB
200604_Y1_647N.lif - Series005 - C=1.tif
1.8 MB
200604_Y1_647N.lif - Series005 - C=1_crop.tif
763.9 kB
200604_Y1_647N.lif - Series006 - C=1.tif
1.8 MB
200604_Y1_647N.lif - Series006 - C=1_crop.tif
763.9 kB
200604_Y1_647N.lif - Series007 - C=1.tif
1.8 MB
200604_Y1_647N.lif - Series007 - C=1_crop.tif
763.9 kB
200604_Y1_647N.lif - Series008 - C=1.tif
1.8 MB
200604_Y1_647N.lif - Series008 - C=1_crop.tif
763.9 kB
18.2
200604_Y18-2_647N.lif - Series001 - C=1.tif
1.5 MB
200604_Y18-2_647N.lif - Series001 - C=1_crop.tif
487.1 kB
200604_Y18-2_647N.lif - Series002 - C=1.tif
1.5 MB
200604_Y18-2_647N.lif - Series002 - C=1_crop.tif
487.1 kB
200604_Y18-2_647N.lif - Series003 - C=1.tif
1.5 MB
200604_Y18-2_647N.lif - Series003 - C=1_crop.tif
487.1 kB
200604_Y18-2_647N.lif - Series004 - C=1.tif
1.5 MB
200604_Y18-2_647N.lif - Series004 - C=1_crop.tif
487.1 kB
200604_Y18-2_647N.lif - Series005 - C=1.tif
1.5 MB
200604_Y18-2_647N.lif - Series005 - C=1_crop.tif
487.1 kB
Fiji.app
Contents
Info.plist
1.5 kB
Resources
Fiji.icns
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ImageJ.icns
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ImageJ-linux64.old
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README.md
5.2 kB
WELCOME.md
5.5 kB
images
about
about1.tif
2.8 MB
about1.tif.txt
118 Bytes
about2.tif
1.3 MB
about2.tif.txt
119 Bytes
about3.tif
2.4 MB
about3.tif.txt
123 Bytes
about4.tif
1.3 MB
about4.tif.txt
113 Bytes
about5.tif
1.3 MB
about5.tif.txt
120 Bytes
icon-flat.png
2.1 kB
icon.png
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scala-compiler-2.12.1.jar
9.8 MB
scala-library-2.12.1.jar
5.3 MB
scala-reflect-2.12.1.jar
3.5 MB
scala-xml_2.12-1.0.6.jar
547.9 kB
scenery-0f1ee797.jar
2.4 MB
scifio-0.37.3.jar
1.0 MB
scifio-bf-compat-3.0.0.jar
22.2 kB
scifio-cli-0.5.0.jar
37.1 kB
scifio-hdf5-0.1.3.jar
30.2 kB
scifio-jai-imageio-1.1.1.jar
1.0 MB
scifio-lifesci-0.8.0.jar
17.9 kB
scifio-ome-xml-0.15.0.jar
114.4 kB
scijava-common-2.80.1.jar
881.2 kB
scijava-config-2.0.2.jar
7.5 kB
scijava-listeners-1.0.0-beta-2.jar
8.9 kB
scijava-plugins-commands-0.2.3.jar
23.5 kB
scijava-plugins-io-table-0.2.0.jar
8.8 kB
scijava-plugins-platforms-0.3.1.jar
9.4 kB
scijava-plugins-text-markdown-0.1.3.jar
4.4 kB
scijava-plugins-text-plain-0.1.3.jar
4.3 kB
scijava-search-0.6.0.jar
79.3 kB
scijava-table-0.4.0.jar
56.5 kB
scijava-ui-awt-0.1.6.jar
48.9 kB
scijava-ui-swing-0.12.0.jar
187.8 kB
sciview-0.2.0-beta-4.jar
729.8 kB
script-editor-0.5.5.jar
205.8 kB
scripting-beanshell-0.3.3.jar
12.1 kB
scripting-clojure-0.1.6.jar
9.3 kB
scripting-groovy-0.2.7.jar
15.9 kB
scripting-java-0.4.1.jar
18.9 kB
scripting-javascript-0.4.4.jar
7.7 kB
scripting-jruby-0.3.0.jar
8.4 kB
scripting-jython-0.4.2.jar
5.8 kB
scripting-renjin-0.2.2.jar
7.2 kB
scripting-scala-0.2.1.jar
7.1 kB
serializer-2.7.2.jar
276.4 kB
slf4j-api-1.7.25.jar
41.2 kB
snakeyaml-1.23.jar
301.3 kB
spim_data-2.2.2.jar
109.8 kB
spirvcrossj-0.6.0-1.1.106.0.jar
262.0 kB
stats-0.8.1906.jar
759.4 kB
swing-checkbox-tree-1.0.2.jar
8.6 kB
swing-worker-1.1.jar
12.6 kB
swingx-1.6.1.jar
1.4 MB
trakem2-transform-1.0.1.jar
60.2 kB
trove4j-3.0.3.jar
2.5 MB
udunits-4.3.18.jar
126.9 kB
ui-behaviour-1.7.4.jar
122.1 kB
unsafe-fences-1.0.jar
3.3 kB
utils-0.8.1906.jar
394.4 kB
vecmath-1.6.0-scijava-2.jar
164.2 kB
weave_jy2java-2.1.1.jar
14.5 kB
weka-dev-3.9.3.jar
9.3 MB
xalan-2.7.2.jar
3.2 MB
xchart-3.5.4.jar
266.7 kB
xerbla-0.8.jar
935 Bytes
xercesImpl-2.8.1.jar
1.2 MB
xml-apis-ext-1.3.04.jar
85.7 kB
xmlgraphics-commons-2.3.jar
671.7 kB
xmpcore-5.1.2.jar
117.3 kB
xz-1.0.jar
94.7 kB
yecht-1.0.jar
192.4 kB
java
linux-amd64
jdk1.8.0_172
jre
Welcome.html
955 Bytes
lib
amd64
jli
libjli.so
103.6 kB
jvm.cfg
627 Bytes
libavplugin-53.so
49.5 kB
libavplugin-54.so
53.1 kB
libavplugin-55.so
53.1 kB
libavplugin-56.so
53.1 kB
libavplugin-57.so
53.1 kB
libavplugin-ffmpeg-56.so
53.3 kB
libavplugin-ffmpeg-57.so
53.1 kB
libawt.so
772.8 kB
libawt_headless.so
38.1 kB
libawt_xawt.so
442.6 kB
libbci.so
9.6 kB
libdcpr.so
207.6 kB
libdecora_sse.so
73.6 kB
libdeploy.so
165.2 kB
libdt_socket.so
22.4 kB
libfontmanager.so
525.4 kB
libfxplugins.so
151.2 kB
libglass.so
226.2 kB
libgstreamer-lite.so
1.8 MB
libhprof.so
177.6 kB
libinstrument.so
49.3 kB
libj2gss.so
48.8 kB
libj2pcsc.so
15.9 kB
libj2pkcs11.so
78.5 kB
libjaas_unix.so
7.7 kB
libjava.so
226.5 kB
libjava_crw_demo.so
25.7 kB
libjavafx_font.so
16.9 kB
libjavafx_font_freetype.so
25.9 kB
libjavafx_font_pango.so
24.5 kB
libjavafx_font_t2k.so
891.7 kB
libjavafx_iio.so
242.1 kB
libjawt.so
7.0 kB
libjdwp.so
271.6 kB
libjfr.so
26.3 kB
libjfxmedia.so
228.4 kB
libjfxwebkit.so
78.8 MB
libjpeg.so
265.4 kB
libjsdt.so
11.7 kB
libjsig.so
11.1 kB
libjsound.so
7.3 kB
libjsoundalsa.so
81.4 kB
libkcms.so
401.5 kB
liblcms.so
428.1 kB
libmanagement.so
50.4 kB
libmlib_image.so
912.8 kB
libnet.so
115.5 kB
libnio.so
93.3 kB
libnpjp2.so
223.1 kB
libnpt.so
14.3 kB
libprism_common.so
57.1 kB
libprism_es2.so
62.5 kB
libprism_sw.so
73.0 kB
libresource.so
10.5 kB
libsctp.so
28.7 kB
libsplashscreen.so
451.2 kB
libsunec.so
258.0 kB
libt2k.so
493.9 kB
libunpack.so
164.7 kB
libverify.so
66.5 kB
libzip.so
128.8 kB
server
Xusage.txt
1.4 kB
libjsig.so
11.1 kB
libjvm.so
17.1 MB
calendars.properties
1.4 kB
charsets.jar
3.1 MB
classlist
84.3 kB
cmm
CIEXYZ.pf
51.2 kB
GRAY.pf
632 Bytes
LINEAR_RGB.pf
1.0 kB
PYCC.pf
274.5 kB
sRGB.pf
3.1 kB
content-types.properties
5.9 kB
currency.data
4.1 kB
deploy
MixedCodeMainDialog.ui
4.5 kB
MixedCodeMainDialogJs.ui
6.1 kB
cautionshield.icns
3.6 kB
ffjcext.zip
13.5 kB
java-icon.ico
29.9 kB
messages.properties
2.9 kB
messages_de.properties
3.3 kB
messages_es.properties
3.6 kB
messages_fr.properties
3.4 kB
messages_it.properties
3.2 kB
messages_ja.properties
6.3 kB
messages_ko.properties
5.7 kB
messages_pt_BR.properties
3.3 kB
messages_sv.properties
3.4 kB
messages_zh_CN.properties
4.1 kB
messages_zh_HK.properties
3.8 kB
messages_zh_TW.properties
3.8 kB
mixcode_s.png
3.1 kB
splash.gif
8.6 kB
splash@2x.gif
15.3 kB
splash_11-lic.gif
7.8 kB
splash_11@2x-lic.gif
12.2 kB
deploy.jar
2.3 MB
desktop
applications
sun-java.desktop
777 Bytes
sun-javaws.desktop
619 Bytes
sun_java.desktop
624 Bytes
icons
LowContrast
16x16
apps
sun-java.png
519 Bytes
sun-javaws.png
519 Bytes
sun-jcontrol.png
519 Bytes
mimetypes
gnome-mime-application-x-java-archive.png
525 Bytes
gnome-mime-application-x-java-jnlp-file.png
525 Bytes
gnome-mime-text-x-java.png
525 Bytes
48x48
apps
sun-java.png
1.5 kB
sun-javaws.png
1.5 kB
sun-jcontrol.png
1.5 kB
mimetypes
gnome-mime-application-x-java-archive.png
1.9 kB
gnome-mime-application-x-java-jnlp-file.png
1.9 kB
gnome-mime-text-x-java.png
1.9 kB
hicolor
16x16
apps
sun-java.png
383 Bytes
sun-javaws.png
383 Bytes
sun-jcontrol.png
383 Bytes
mimetypes
gnome-mime-application-x-java-archive.png
783 Bytes
gnome-mime-application-x-java-jnlp-file.png
783 Bytes
gnome-mime-text-x-java.png
783 Bytes
48x48
apps
sun-java.png
1.4 kB
sun-javaws.png
1.4 kB
sun-jcontrol.png
1.4 kB
mimetypes
gnome-mime-application-x-java-archive.png
3.2 kB
gnome-mime-application-x-java-jnlp-file.png
3.2 kB
gnome-mime-text-x-java.png
3.2 kB
mime
packages
x-java-archive.xml
1.8 kB
x-java-jnlp-file.xml
412 Bytes
ext
cldrdata.jar
3.9 MB
dnsns.jar
8.3 kB
jaccess.jar
44.5 kB
jfxrt.jar
18.5 MB
localedata.jar
1.2 MB
meta-index
1.3 kB
nashorn.jar
2.0 MB
sunec.jar
41.7 kB
sunjce_provider.jar
277.8 kB
sunpkcs11.jar
250.1 kB
zipfs.jar
69.0 kB
flavormap.properties
3.9 kB
fontconfig.RedHat.5.bfc
4.5 kB
fontconfig.RedHat.5.properties.src
8.8 kB
fontconfig.RedHat.6.bfc
4.2 kB
fontconfig.RedHat.6.properties.src
8.7 kB
fontconfig.SuSE.10.bfc
6.7 kB
fontconfig.SuSE.10.properties.src
16.8 kB
fontconfig.SuSE.11.bfc
7.0 kB
fontconfig.SuSE.11.properties.src
16.8 kB
fontconfig.Turbo.bfc
4.7 kB
fontconfig.Turbo.properties.src
9.2 kB
fontconfig.bfc
1.7 kB
fontconfig.properties.src
1.9 kB
fonts
LucidaBrightDemiBold.ttf
75.1 kB
LucidaBrightDemiItalic.ttf
75.1 kB
LucidaBrightItalic.ttf
80.9 kB
LucidaBrightRegular.ttf
344.9 kB
LucidaSansDemiBold.ttf
317.9 kB
LucidaSansRegular.ttf
698.2 kB
LucidaTypewriterBold.ttf
234.1 kB
LucidaTypewriterRegular.ttf
242.7 kB
fonts.dir
4.0 kB
hijrah-config-umalqura.properties
14.0 kB
images
cursors
cursors.properties
1.3 kB
invalid32x32.gif
153 Bytes
motif_CopyDrop32x32.gif
158 Bytes
motif_CopyNoDrop32x32.gif
153 Bytes
motif_LinkDrop32x32.gif
162 Bytes
motif_LinkNoDrop32x32.gif
153 Bytes
motif_MoveDrop32x32.gif
141 Bytes
motif_MoveNoDrop32x32.gif
153 Bytes
icons
sun-java.png
4.7 kB
sun-java_HighContrast.png
3.7 kB
sun-java_HighContrastInverse.png
3.8 kB
sun-java_LowContrast.png
4.0 kB
javafx.properties
56 Bytes
javaws.jar
483.1 kB
jce.jar
115.7 kB
jexec
10.6 kB
jfr
default.jfc
20.1 kB
profile.jfc
20.1 kB
jfr.jar
560.7 kB
jfxswt.jar
33.9 kB
jsse.jar
660.6 kB
jvm.hprof.txt
4.2 kB
locale
de
LC_MESSAGES
sunw_java_plugin.mo
2.5 kB
es
LC_MESSAGES
sunw_java_plugin.mo
2.5 kB
fr
LC_MESSAGES
sunw_java_plugin.mo
2.7 kB
it
LC_MESSAGES
sunw_java_plugin.mo
2.4 kB
ja
LC_MESSAGES
sunw_java_plugin.mo
2.4 kB
ko
LC_MESSAGES
sunw_java_plugin.mo
2.4 kB
ko.UTF-8
LC_MESSAGES
sunw_java_plugin.mo
2.8 kB
pt_BR
LC_MESSAGES
sunw_java_plugin.mo
2.4 kB
sv
LC_MESSAGES
sunw_java_plugin.mo
2.4 kB
zh
LC_MESSAGES
sunw_java_plugin.mo
2.0 kB
zh.GBK
LC_MESSAGES
sunw_java_plugin.mo
2.0 kB
zh_HK.BIG5HK
LC_MESSAGES
sunw_java_plugin.mo
2.0 kB
zh_TW
LC_MESSAGES
sunw_java_plugin.mo
2.0 kB
zh_TW.BIG5
LC_MESSAGES
sunw_java_plugin.mo
2.0 kB
logging.properties
2.5 kB
management
jmxremote.access
4.0 kB
jmxremote.password.template
2.9 kB
management.properties
14.6 kB
snmp.acl.template
3.4 kB
management-agent.jar
381 Bytes
meta-index
2.0 kB
net.properties
4.5 kB
oblique-fonts
LucidaSansDemiOblique.ttf
91.4 kB
LucidaSansOblique.ttf
253.7 kB
LucidaTypewriterBoldOblique.ttf
63.2 kB
LucidaTypewriterOblique.ttf
137.5 kB
fonts.dir
2.1 kB
plugin.jar
950.6 kB
psfont.properties.ja
2.8 kB
psfontj2d.properties
10.4 kB
resources.jar
3.5 MB
rt.jar
66.3 MB
security
blacklist
4.1 kB
blacklisted.certs
1.3 kB
cacerts
114.8 kB
java.policy
2.5 kB
java.security
41.5 kB
javaws.policy
98 Bytes
policy
limited
US_export_policy.jar
3.0 kB
local_policy.jar
3.5 kB
unlimited
US_export_policy.jar
3.0 kB
local_policy.jar
3.0 kB
trusted.libraries
0 Bytes
sound.properties
1.2 kB
tzdb.dat
105.9 kB
plugin
desktop
sun_java.desktop
624 Bytes
sun_java.png
4.4 kB
lib
Java-8
96 Bytes
luts
16_colors.lut
768 Bytes
5_ramps.lut
2.4 kB
6_shades.lut
768 Bytes
Cyan Hot.lut
768 Bytes
Green Fire Blue.lut
768 Bytes
HiLo.lut
768 Bytes
ICA.lut
768 Bytes
ICA2.lut
768 Bytes
ICA3.lut
768 Bytes
Magenta Hot.lut
768 Bytes
Orange Hot.lut
768 Bytes
Rainbow RGB.lut
768 Bytes
Red Hot.lut
768 Bytes
Thermal.lut
768 Bytes
Yellow Hot.lut
768 Bytes
blue_orange_icb.lut
800 Bytes
brgbcmyw.lut
768 Bytes
cool.lut
800 Bytes
edges.lut
800 Bytes
gem.lut
800 Bytes
glasbey.lut
3.6 kB
glasbey_inverted.lut
768 Bytes
glasbey_on_dark.lut
3.8 kB
glow.lut
3.5 kB
mpl-inferno.lut
768 Bytes
mpl-magma.lut
768 Bytes
mpl-plasma.lut
768 Bytes
mpl-viridis.lut
768 Bytes
phase.lut
3.3 kB
physics.lut
768 Bytes
royal.lut
800 Bytes
sepia.lut
2.9 kB
smart.lut
800 Bytes
thal.lut
800 Bytes
thallium.lut
800 Bytes
unionjack.lut
3.5 kB
macros
AutoRun
AutoRun_Scripts.ijm
395 Bytes
StartupMacros.fiji.ijm
8.8 kB
listManagement.txt
885 Bytes
toolsets
Clear Custom Tools.txt
103 Bytes
Drawing Tools.txt
5.8 kB
Lookup Tables.txt
3.2 kB
plugins
3D_Blob_Segmentation-3.0.1.jar
12.9 kB
3D_Objects_Counter-2.0.1.jar
22.9 kB
3D_Viewer-4.0.2.jar
568.8 kB
Analyze
Dynamic_ROI_Profiler.clj
3.7 kB
Measure_RGB.txt
744 Bytes
AnalyzeSkeleton_-3.3.0.jar
50.1 kB
Anisotropic_Diffusion_2D-2.0.1.jar
11.4 kB
Archipelago_Plugins-0.5.4.jar
28.1 kB
Arrow_-2.0.2.jar
29.1 kB
Auto_Local_Threshold-1.10.0.jar
12.3 kB
Auto_Threshold-1.17.1.jar
17.9 kB
BalloonSegmentation_-3.0.1.jar
69.2 kB
Bug_Submitter-2.1.1.jar
23.8 kB
CPU_Meter-2.0.1.jar
5.9 kB
Calculator_Plus-2.0.1.jar
7.3 kB
Cell_Counter-2.2.2.jar
30.5 kB
Colocalisation_Analysis-3.0.5.jar
153.0 kB
Color_Histogram-2.0.7.jar
21.9 kB
Color_Inspector_3D-2.3.2.jar
407.6 kB
Colour_Deconvolution-3.0.2.jar
15.2 kB
CorrectBleach_-2.0.2.jar
16.9 kB
Correct_3D_Drift-1.0.3.jar
10.7 kB
Descriptor_based_registration-2.1.5.jar
79.4 kB
Dichromacy_-2.1.1.jar
20.6 kB
Directionality_-2.3.0.jar
25.1 kB
Examples
Add_Popup_Split_Channels.bsh
420 Bytes
Anaglyph_for_Red_Cyan_glasses.rb
1.8 kB
Blobs_Demo_in_Ruby.rb
2.0 kB
Command_Launchers
Command_Launcher_BeanShell.bsh
1.2 kB
Command_Launcher_Clojure.clj
1.2 kB
Command_Launcher_Javascript.js
1.0 kB
Command_Launcher_Python.py
1.2 kB
Command_Launcher_Ruby.rb
826 Bytes
CoverMaker
Cover_Maker.py
8.7 kB
Prepare_Cover_Maker_Database.py
7.4 kB
Delayed_Snapshot.py
647 Bytes
Delayed_Snapshot_Window.bsh
3.1 kB
Edit_LUT_As_Text.py
2.2 kB
Extended_Profile_Plot.bsh
580 Bytes
Fiji_Cube.ijm
2.0 kB
Fiji_Logo_3D.js
2.1 kB
Find_Dimension_of_Raw_Image.py
1.4 kB
Image_To_Tool_Icon.bsh
1.7 kB
Multithreaded_Image_Processing.clj
7.0 kB
Multithreaded_Image_Processing_in_Javascript.js
6.0 kB
Plasma_Cloud.rb
6.3 kB
Same_Slice_in_Multiple_Images.rb
1.6 kB
The_Hue_Game.bsh
8.6 kB
TrakEM2_Example_Scripts
Homogenize_Ball_Radius.py
665 Bytes
Measure_AreaLists.py
4.4 kB
T2_Select_All.py
411 Bytes
T2_set_all_transforms_to_identity.py
256 Bytes
extract_stack_under_arealist.py
2.2 kB
blend_two_images.clj
1.5 kB
celsius_to_fahrenheit.clj
2.1 kB
chess_.py
3.8 kB
compose_rgb-stacks.bsh
3.2 kB
downsample_.js
4.3 kB
list_all_threads.py
777 Bytes
random_noise_example.clj
1.6 kB
FS_Align_TrakEM2-2.0.3.jar
22.8 kB
Feature_Detection-2.0.2.jar
19.2 kB
Fiji_Archipelago-2.0.1.jar
185.6 kB
Fiji_Developer-2.0.7.jar
45.3 kB
Fiji_Package_Maker-2.1.1.jar
24.0 kB
Fiji_Plugins-3.1.1.jar
97.4 kB
FlowJ_-1.29.3.jar
310.0 kB
Graph_Cut-1.0.2.jar
40.0 kB
Gray_Morphology-2.3.4.jar
33.2 kB
H5J_Loader_Plugin-1.1.0.jar
43.9 kB
HDF5_Vibez-1.0.2.jar
47.0 kB
Helmholtz_Analysis-2.0.2.jar
8.9 kB
IJ_Robot-2.0.1.jar
6.2 kB
IO_-3.0.4.jar
168.3 kB
Image_5D-2.0.2.jar
130.6 kB
Image_Expression_Parser-3.0.1.jar
83.9 kB
Interactive_3D_Surface_Plot-3.0.0.jar
96.2 kB
IsoData_Classifier-2.0.1.jar
4.6 kB
JRuby
imagej.rb
18.3 kB
Kuwahara_Filter-2.0.1.jar
5.5 kB
KymographBuilder-2.1.1.jar
18.7 kB
LSM_Reader-4.1.2.jar
20.5 kB
LSM_Toolbox-4.1.2.jar
338.6 kB
Lasso_and_Blow_Tool-2.0.2.jar
25.2 kB
Linear_Kuwahara-2.0.1.jar
7.6 kB
LocalThickness_-4.0.2.jar
30.5 kB
MTrack2_-2.0.1.jar
11.6 kB
M_I_P-2.0.1.jar
14.1 kB
Macros
About_Plugin_Macros.txt
178 Bytes
Bulls_Eye.txt
734 Bytes
Polygon_.txt
2.8 kB
RGB_Histogram.txt
961 Bytes
batch_convert_any_to_tif.txt
581 Bytes
Manual_Tracking-2.1.1.jar
25.0 kB
MorphoLibJ_-1.4.2.1.jar
865.0 kB
Multi_Kymograph-3.0.1.jar
15.6 kB
OOFTubularityMeasure_Plugin.jar
4.3 MB
PIV_analyser-1.1.2.jar
22.4 kB
QuickPALM_-1.1.2.jar
59.0 kB
RATS_-2.0.2.jar
13.0 kB
Reconstruct_Reader-2.0.4.jar
68.9 kB
SPIM_Opener-2.0.2.jar
39.9 kB
SPIM_Registration-5.0.20.jar
1.6 MB
Samples_-2.0.2.jar
2.6 kB
Scripts
File
Fix_Funny_Filenames.ijm
2.4 kB
Make_Screencast.bsh
7.1 kB
Open_Samples
Adelsons_Squares.ijm
3.9 kB
Comparing_Lengths.ijm
1.0 kB
Spirals_.ijm
1.3 kB
Straight_Lines.ijm
1.4 kB
Striped_Circles.ijm
1.4 kB
Image
Adjust
Scale_to_DPI.js
3.3 kB
Color
Set_Color_By_Wavelength.ijm
1.3 kB
Hyperstacks
Temporal-Color_Code.ijm
6.2 kB
Plugins
AutoRun
Check_Required_Update_Sites.js
1.3 kB
Utilities
Create_Desktop_Icon.bsh
1.3 kB
Find_Jar_For_Class.bsh
1.5 kB
Record_Desktop.py
1.9 kB
Record_Window.py
6.1 kB
Series_Labeler-2.0.1.jar
34.8 kB
Sholl_Analysis-4.0.0-SNAPSHOT.jar
217.8 kB
Simple_Neurite_Tracer-3.1.6.jar
362.4 kB
Siox_Segmentation-1.0.5.jar
113.6 kB
Skeletonize3D_-2.1.1.jar
10.2 kB
SplineDeformationGenerator_-2.0.2.jar
44.7 kB
Stack_Manipulation-2.1.2.jar
37.2 kB
Statistical_Region_Merging-2.0.1.jar
7.7 kB
Stitching_-3.1.6.jar
367.8 kB
Sync_Win-1.7-fiji4.jar
45.1 kB
Thread_Killer-2.0.1.jar
4.3 kB
Time_Lapse-2.1.0.jar
80.4 kB
Time_Stamper-2.1.0.jar
6.1 kB
ToAST_-25.0.2.jar
25.3 kB
TopoJ_-2.0.1.jar
9.4 kB
TrackMate_-5.2.0.jar
1.4 MB
Trainable_Segmentation-3.2.34.jar
502.1 kB
TrakEM2_-1.3.2.jar
2.4 MB
TrakEM2_Archipelago-2.0.3.jar
23.3 kB
TubularGeodesics_Plugin.jar
2.9 MB
Utilities
Close_All_Without_Saving.txt
404 Bytes
VIB_-3.0.2.jar
450.9 kB
Vaa3d_Reader-2.0.2.jar
20.8 kB
Vaa3d_Writer-1.0.2.jar
6.4 kB
Video_Editing-2.0.1.jar
30.0 kB
View5D_-1.3.2.jar
170.8 kB
Volume_Calculator-2.0.2.jar
31.0 kB
Volume_Viewer-2.01.2.jar
122.7 kB
bUnwarpJ_-2.6.12.jar
194.7 kB
bigdataviewer_fiji-6.0.0.jar
171.5 kB
bigwarp_fiji-5.0.0.jar
318.7 kB
bio-formats_plugins-6.5.0.jar
255.0 kB
blockmatching_-2.1.3.jar
18.1 kB
hIPNAT_-1.0.12-SNAPSHOT.jar
62.8 kB
level_sets-1.0.2.jar
85.2 kB
mpicbg_-1.2.0.jar
139.5 kB
panorama_-3.0.2.jar
31.0 kB
readme.txt
22 Bytes
register_virtual_stack_slices-3.0.7.jar
43.7 kB
registration_3d-2.0.1.jar
32.6 kB
trakem2_tps-1.1.4.jar
10.9 kB
z_spacing-1.1.1.jar
132.8 kB
retro
backport-util-concurrent-3.1.jar
331.7 kB
retrotranslator-runtime-1.2.9.jar
308.5 kB
retrotranslator-transformer-1.2.9.jar
173.9 kB
scripts
ImageJ.m
900 Bytes
InstallJava3D.m
5.0 kB
IsJava3DInstalled.m
569 Bytes
Matlab3DViewerDemo_1.m
4.5 kB
Matlab3DViewerDemo_2.m
4.7 kB
Matlab3DViewerDemo_3.m
2.9 kB
Matlab3DViewerIntroduction.m
6.4 kB
Miji.m
3.3 kB
Miji_Test.m
147 Bytes
bfopen.m
10.0 kB
copytoImg.m
2.8 kB
copytoImgPlus.m
4.4 kB
copytoMatlab.m
2.5 kB
importTrackMateTracks.m
5.6 kB
trackmateEdges.m
7.0 kB
trackmateFeatureDeclarations.m
5.8 kB
trackmateGraph.m
3.5 kB
trackmateImageCalibration.m
2.6 kB
trackmateSpots.m
6.3 kB