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Title: Sequence alignments for ITS, rpl16, and trnL-trnF

Author information
Name: Lars Hedenäs
Institution: Department of Botany, Swedish Museum of Natural History
Address: Box 50007, SE-104 05 Stockholm, Sweden
Email: lars.hedenas@nrm.se

Date of data collection: 2020-2021

Geographic range: Mainly Scandinavia

Funding sources: Internal institutional funds

Journal: Lindbergia, at http://www.lindbergia.org/

Manuscript number: Lindbergia L01144

Title of paper: Incipient speciation in Scandinavian Distichium capillaceum (Distichiaceae, Bryophyta)

Included data files: (1) Distichium_alignment_ITS.txt; (2) Distichium_alignment_3 markers.txt

Abstract: The two data files consist of sequence alignments in FASTA format. File (1) is the alignment used for the analysis resulting in the network in Fig. 1A and file (2) is the alignment used for the analysis resulting in the network in Fig. 1B. The GenBank numbers corresponding with the sequence numbers can be found in Appendix 1 in the paper.

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File: Distichium_alignment_ITS.txt

Usage notes: The positions in the file correspond with ITS and indel codings, as follows:

ITS positions: 1-762
ITS indel coding positions: 764-810

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File: Distichium_alignment_3 markers.txt

Usage notes: The positions in the file correspond with ITS, rpl16, trnL-trnF, and indel codings, as follows:

ITS positions: 1-759
ITS indel coding positions: 761-800

rpl16 positions: 802-1448
rpl16 indel coding positions: 1450-1457

trnL-trnF positions: 1459-2007
trnL-trnF indel coding positions: 2009-2015