Detect
Modules resulting in creation of new objects to be stored in the workspace.
Circle detection
Detects circles within grayscale images using the Hough transform.
Identify objects
Creates objects from an input binary image.
Manually identify objects
Manually create objects using the ImageJ selection tools.
Rectangle detection
Detects rectangles within grayscale images using the Hough transform.
Ridge detection
Detects ridge objects in an image from the workspace.
Run TrackMate
Uses the TrackMate plugin included with Fiji to detect and track spots in images.
Sphere detection
Detects spheres within grayscale images using the Hough transform.
Spot detection
Detects spot-like features in 2D and 3D using TrackMate's LogDetector.