Steps for running and adding SIPNET forecasts
Files associated with running forecasts:
generate.gefs.xml
: R script for setting start and end date in xml; creates workflow id and associated directory
*sitename*.xml
: site specific xml script
*sitename*.sh
: site specific shell file to run forecasts with cron jobs
Files associated with graphing forecasts:
download_*sitename*.R
: R script for downloading and cleaning Flux data from towers
graph_fluxtowers.R
: script to create RData for shiny app
forecast.graphs.R
: script that is used to get forecasted data for graph_fluxtowers.R
graph_SDA_fluxtowers.R
: script to graph SDA fluxtowers
automatic_graphs.sh
: shell for running email.R
, graph_fluxtowers.R
, graph_SDA_fluxtowers.R
Files for automatic WCr emails:
email_graphs.R
- creates graphs for the email - this is specifically for WCr right now
email.R
- sends the email out with graphs for today’s forecast
To add forecast and add to dashboard:
- create a flux download for site
- create site specific xml
- create site specific shell file to run forecast automatically
- Add site.num, site.abv, outdir, db.num to graph_fluxtowers.R