Published September 23, 2021 | Version v1.0
Software Open

ImperialCollegeLondon/Delta_Variant_Delhi: Genomic characterization and Epidemiology of an emerging SARS- CoV-2 variant in Delhi, India

  • 1. Imperial College London
  • 2. Imperial College London and University of Copenhagen
  • 3. Imperial College London and University of Oxford


This repository provides code for a two-category Bayesian transmission model. The code is used to infer the altered epidemiological characteristics of the Delta variant based on genomic, mortality, and serology data from Delhi. The preprint can be found here:



Files (4.2 MB)

Additional details