Published August 25, 2021
| Version v1.1
Dataset
Open
Bakta Annotation Examples
Creators
- 1. Bioinformatics and Systems Biology, Justus Liebig University Giessen, Giessen, 35392, Germany; Institute of Medical Microbiology, Justus Liebig University Giessen, Giessen, 35392, Germany; German Centre for Infection Research (DZIF), partner site Giessen-Marburg-Langen, Giessen, Germany
Description
This data repository provides exemplary bacterial genome annotations conducted with Bakta v1.1 comprising a broad taxonomical range of many pathogenic (all ESKAPE), commensal and environmental genomes from RefSeq.
Bakta is a tool for the rapid & standardized local annotation of bacterial genomes & plasmids. It provides dbxref-rich and sORF-including annotations in machine-readble JSON & bioinformatics standard file formats for automatic downstream analysis: https://github.com/oschwengers/bakta
Files
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(537.8 MB)
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Additional details
Related works
- Is compiled by
- Software: https://github.com/oschwengers/bakta (URL)
- Is supplement to
- Journal article: 10.1099/mgen.0.000685 (DOI)