Tree window for taxa "Taxa"

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Showing Tree block: Trees from "Botryosphaeriaceae.18species.aln.phy_phyml_tree.rn.nex"
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Original Tree:  tree 1 (id 1, version 193)

Tree Description:  ((((((Diplodia_seriata:0.004707,(Diplodia_sapinea:0.004044,Diplodia_scrobiculata:0.004059):0.001912):0.016008,Diplodia_mutila:0.016738):0.00643,Diplodia_corticola:0.027671):0.024974,((Lasiodiplodia_citricola:0.003481,Lasiodiplodia_theobromae:0.003572):0.010944,Lasiodiplodia_gonubiensis:0.015881):0.021813):0.038242,(Neoscytalidium_dimidiatum:0.041636,(Macrophomina_phaseolina:0.040666,(Botryosphaeria_kuwatsukai:0.003707,Botryosphaeria_dothidea:0.006891):0.02976):0.011398):0.015593):0.008646,((((Neofusicoccum_kwambonambiense:0.002743,Neofusicoccum_cordaticola:0.002993):0.000248,(Neofusicoccum_ribis:0.001736,Neofusicoccum_umdonicola:0.00104):0.001217):0.000521,Neofusicoccum_parvum:0.003771):0.03777,Dothiorella_sarmentorum:0.081189):0.008646);
Tree with node numbers:
                                ,========8 Diplodia seriata
                           ,===7|
                           |    |    ,==10 Diplodia sapinea
                      ,===6|    `===9|
                      |    |         `==11 Diplodia scrobiculata
                 ,===5|    |
                 |    |    `============12 Diplodia mutila
                 |    |
            ,===4|    `=================13 Diplodia corticola
            |    |
            |    |         ,============16 Lasiodiplodia citricola
            |    |    ,==15|
       ,===3|    `==14|    `============17 Lasiodiplodia theobromae
       |    |         |
       |    |         `=================18 Lasiodiplodia gonubiensis
       |    |
       |    |    ,======================20 Neoscytalidium dimidiatum
       |    `==19|
       |         |    ,=================22 Macrophomina phaseolina
       |         `==21|
       |              |    ,============24 Botryosphaeria kuwatsukai
======2|              `==23|
       |                   `============25 Botryosphaeria dothidea
       |
       |                   ,============30 Neofusicoccum kwambonambiense
       |              ,==29|
       |              |    `============31 Neofusicoccum cordaticola
       |         ,==28|
       |         |    |    ,============33 Neofusicoccum ribis
       |    ,==27|    `==32|
       |    |    |         `============34 Neofusicoccum umdonicola
       `==26|    |
            |    `======================35 Neofusicoccum parvum
            |
            `===========================36 Dothiorella sarmentorum
Branch lengths
Node	Term/Int	Length

node 2: 	Internal	1.7975133655488295E308
node 3: 	Internal	0.008646
node 4: 	Internal	0.038242
node 5: 	Internal	0.024974
node 6: 	Internal	0.00643
node 7: 	Internal	0.016008
node 8: 	Terminal	0.004707
node 9: 	Internal	0.001912
node 10: 	Terminal	0.004044
node 11: 	Terminal	0.004059
node 12: 	Terminal	0.016738
node 13: 	Terminal	0.027671
node 14: 	Internal	0.021813
node 15: 	Internal	0.010944
node 16: 	Terminal	0.003481
node 17: 	Terminal	0.003572
node 18: 	Terminal	0.015881
node 19: 	Internal	0.015593
node 20: 	Terminal	0.041636
node 21: 	Internal	0.011398
node 22: 	Terminal	0.040666
node 23: 	Internal	0.02976
node 24: 	Terminal	0.003707
node 25: 	Terminal	0.006891
node 26: 	Internal	0.008646
node 27: 	Internal	0.03777
node 28: 	Internal	5.21E-4
node 29: 	Internal	2.48E-4
node 30: 	Terminal	0.002743
node 31: 	Terminal	0.002993
node 32: 	Internal	0.001217
node 33: 	Terminal	0.001736
node 34: 	Terminal	0.00104
node 35: 	Terminal	0.003771
node 36: 	Terminal	0.081189


--------------- Trace Character History ---------------

Character 1: Character 1
Marginal prob. recon. with model Mk1 (est.) [rate 7.35208959 [est.]]  -log L.:6.9994591 (Opt.:  width 0.0)  Reporting likelihoods as Proportional Likelihoods; Threshold when decisions made: 2 Calc. by Maximum likelihood reconstruct (Generic categorical) (id# 1108)

node 2:  Heterothallic: 0.61982036, Homothallic: 0.38017964
node 3:  Heterothallic: 0.80714302, Homothallic: 0.19285698
node 4:  Heterothallic: 0.90038644*, Homothallic: 0.09961356
node 5:  Heterothallic: 0.99163356*, Homothallic: 0.00836644
node 6:  Heterothallic: 0.99737034*, Homothallic: 0.00262966
node 7:  Heterothallic: 0.99992805*, Homothallic: 0.00007195
node 8:  Heterothallic: 1
node 9:  Heterothallic: 0.99998327*, Homothallic: 0.00001673
node 10:  Heterothallic: 1
node 11:  Heterothallic: 1
node 12:  Heterothallic: 1
node 13:  Heterothallic: 1
node 14:  Heterothallic: 0.82912466, Homothallic: 0.17087534
node 15:  Heterothallic: 0.99853736*, Homothallic: 0.00146264
node 16:  Heterothallic: 1
node 17:  Heterothallic: 1
node 18:  Homothallic: 1
node 19:  Heterothallic: 0.94301493*, Homothallic: 0.05698507
node 20:  Heterothallic: 1
node 21:  Heterothallic: 0.97059449*, Homothallic: 0.02940551
node 22:  Heterothallic: 1
node 23:  Heterothallic: 0.99952465*, Homothallic: 0.00047535
node 24:  Heterothallic: 1
node 25:  Heterothallic: 1
node 26:  Heterothallic: 0.43443692, Homothallic: 0.56556308
node 27:  Heterothallic: 0.00018754, Homothallic: 0.99981246*
node 28:  Heterothallic: 0.00000108, Homothallic: 0.99999892*
node 29:  Heterothallic: 0.00000102, Homothallic: 0.99999898*
node 30:  Homothallic: 1
node 31:  Homothallic: 1
node 32:  Heterothallic: 0.00000088, Homothallic: 0.99999912*
node 33:  Homothallic: 1
node 34:  Homothallic: 1
node 35:  Homothallic: 1
node 36:  Homothallic: 1