Published July 29, 2021 | Version v1
Dataset Open

Structural heterogeneity of cellular K5/K14 filaments as revealed by cryo-electron microscopy

  • 1. University of Zurich
  • 2. Northwestern University
  • 3. Leipzig University

Description

Keratin intermediate filaments are an essential and major component of the cytoskeleton in epithelial cells. They form a stable yet dynamic filamentous network extending from the nucleus to the cell periphery, which provides resistance to mechanical stresses. Mutations in keratin genes are related to a variety of epithelial tissue diseases. Despite their importance, the molecular structure of keratin filaments remains largely unknown. In this study, we analyzed the structure of keratin 5/keratin 14 filaments within ghost keratinocytes by cryo-electron microscopy and cryo-electron tomography. By averaging a large number of keratin segments, we have gained insights into the helical architecture of the filaments. Two-dimensional classification revealed profound variations in the diameter of keratin filaments and their subunit organization. Reconstitution of filaments of substantial length uncovered a high degree of internal heterogeneity along single filaments, which can contain regions of helical symmetry, regions with less symmetry and regions with significant diameter fluctuations. Cross section views of filaments revealed that keratins form hollow cylinders consisting of multiple protofilaments, with an electron dense core located in the center of the filament. These findings shed light on the complex and remarkable heterogenic architecture of keratin filaments, suggesting that they are highly flexible, dynamic cytoskeletal structures.

Notes

55 nm long keratin segments were finally classified into 50 representative 2D classes containing 305,495 particles. 36 nm long keratin segments were finally classified into 100 representative 2D classes containing 197,541 particles.

Funding provided by: Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100001711
Award Number: 31003A, 179418

Funding provided by: Universität Zürich
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100006447
Award Number: FK-18-041

Files

36nm_Class_1.tif

Files (19.3 MB)

Name Size Download all
md5:5f15ba07e63c43d60fccbf139c6864aa
117.1 kB Preview Download
md5:4715b431045920b072e85d31d8ff0c90
110.5 kB Preview Download
md5:bbe419c4965a1c3cec8d3c9a1cd0a60c
103.4 kB Preview Download
md5:aa3f6e28ed2e449da26aa999c8c24e2e
113.7 kB Preview Download
md5:cebd45f35e81dac8b026b31248d81719
105.1 kB Preview Download
md5:a5f15353e138d7b995c10a540bd4bf65
104.4 kB Preview Download
md5:5b72a8c91e582f292fec9f495e46dcbf
113.0 kB Preview Download
md5:4db4d4d358c431222b6f25aa8afc047f
121.0 kB Preview Download
md5:af8a67fe7e3dcc5816f40c75060bc4aa
109.2 kB Preview Download
md5:897d288b54cb2b51a1b01b5c54bc47f5
109.0 kB Preview Download
md5:4371b441feb62a1e908c970540b99b76
116.0 kB Preview Download
md5:bc0f43749a4864d108541f2e4842e83e
104.8 kB Preview Download
md5:7e413f035bdda0fca967487d39ba43d5
103.3 kB Preview Download
md5:2b0b7d44b3cefcd188c11c8c6b87856b
103.8 kB Preview Download
md5:d0fec38fa796035c355ade691e527166
120.7 kB Preview Download
md5:771964ef83ba19acaf937fb337170769
116.1 kB Preview Download
md5:19107e733483ae7776e6adfb696e999d
110.8 kB Preview Download
md5:c7a6ad181b88e7ca71f0fb6f550df4e4
117.9 kB Preview Download
md5:2b4036874fc02b4f78ee353d12c12775
114.2 kB Preview Download
md5:3dfe91547ba32d325e0281a11c4b5f63
108.2 kB Preview Download
md5:182b7d43fd13fdf6cb55e584121e7632
111.7 kB Preview Download
md5:1306347ebe61c5a2724d7d717d47f83d
109.2 kB Preview Download
md5:7bc82b11d5d17f43eb9edaa08004d684
100.2 kB Preview Download
md5:d4bab30b76c64ef5ada45d9567339155
107.8 kB Preview Download
md5:8f3ebd3e55408c08961f2e107f91169b
117.7 kB Preview Download
md5:e0a8fab7ade38c3b0e95308b50261c2e
119.0 kB Preview Download
md5:1272e78e873784c3bd2f250f62d7945c
120.0 kB Preview Download
md5:bc95661ba9f20eb6152c096fd10ff4c1
118.9 kB Preview Download
md5:2e21285f6e7006024df3ff0b99da9228
104.9 kB Preview Download
md5:11f73cf9fb5c8dfa8a7d47798db0123f
111.4 kB Preview Download
md5:8ec64d04578ed18a5ed276448d002527
96.4 kB Preview Download
md5:3a2ec8a2930dab6ee6d6ff465c39fb3c
111.8 kB Preview Download
md5:a11c970c4cabc86fbb373137df4340d4
101.9 kB Preview Download
md5:db4925ea7047ab2ae05876b54381069a
102.2 kB Preview Download
md5:1dd94d26bcd690bf4525a5ae1b00adb3
100.1 kB Preview Download
md5:b4e1d62692e9df181d30c6b6f330157d
109.0 kB Preview Download
md5:bc8af9e1fe93386174eb953a4a4db9f0
102.1 kB Preview Download
md5:a547202dc840f26b3f9f618468dfaa32
108.5 kB Preview Download
md5:47c94c7d0afb2662b77564a9321940d0
121.9 kB Preview Download
md5:8a2288a8feb13330c1c40c33c8158d28
105.8 kB Preview Download
md5:694e8bc3974a15f20a30bdf5e2dff7b7
106.8 kB Preview Download
md5:643a6f3e2527011493029764eccb8ec5
111.4 kB Preview Download
md5:04cad7e9a6bf18cff54fd5fff1bff88f
115.2 kB Preview Download
md5:6511bb0dbd895dd984983615bc97aeb8
100.6 kB Preview Download
md5:08b66f4fd2e469c5a80f04a1541c12e3
119.4 kB Preview Download
md5:7c169cd54c46c1871522b21e2c0ef182
101.7 kB Preview Download
md5:cee25b1575b05c60f8a8d72586094938
113.0 kB Preview Download
md5:16df4a38cc7ef91cdb5020604c6633ff
94.1 kB Preview Download
md5:46b033b2fe8c5b7d4f76d0571ca714ea
108.5 kB Preview Download
md5:6d97d9cbbc7d9365d6ad97c76c3db5ae
100.7 kB Preview Download
md5:0c982fd7cc4f6d83e3d8d14d162ff2d0
119.6 kB Preview Download
md5:dcd3c00c0a69cc0ea375d7467f4964d9
118.3 kB Preview Download
md5:832a8c86e820f0387280be41ec60fac5
105.4 kB Preview Download
md5:389bf94c02e8171be31ae063d9462612
109.4 kB Preview Download
md5:d61f739f5e849cd9356f67726bc3941b
100.9 kB Preview Download
md5:7e724a14cb111b9741f5e2de46549368
111.2 kB Preview Download
md5:e742fe2d184119ac0c8910df22ea1771
104.9 kB Preview Download
md5:726b1f4ff821040350f28e6ad9a0d7a5
113.4 kB Preview Download
md5:4c5b8934047523031d57f460a575abcf
118.9 kB Preview Download
md5:e3f7dd14e5465e885d3172e172c37d56
102.2 kB Preview Download
md5:789c26707b599e3ac10468bd1ef9f227
105.9 kB Preview Download
md5:df55338b2ddddd8c147914a36fec1ff8
106.5 kB Preview Download
md5:a7c3d32fddd743e80bfe15d2cdd166fb
114.7 kB Preview Download
md5:22130c55f680b589eebae738c3084782
91.5 kB Preview Download
md5:88e340f8902f4886c4776d25f81db72e
117.4 kB Preview Download
md5:0e6411857be10e7db25e7e20a0e637c2
119.8 kB Preview Download
md5:4658505583ff74c7895405f452a298f6
116.0 kB Preview Download
md5:512051899ba3e4a69c58e1b766f3a338
118.7 kB Preview Download
md5:0b79fdf98d23cf742a95d739c95f8c87
107.3 kB Preview Download
md5:e9e22898942f854f78153a0fd17091c9
116.4 kB Preview Download
md5:325f3a500bddc68808d76feb4908cd48
119.0 kB Preview Download
md5:b36c20a1414378a531c22e5e0ffd22db
111.1 kB Preview Download
md5:7f141cf4ec7c0dbd0086172167c1bc8c
113.7 kB Preview Download
md5:979e63410befcbf888b3f83eb5d166e0
109.9 kB Preview Download
md5:3ed61c32fa17329c577b8758dcf4cb25
114.7 kB Preview Download
md5:36be633b788b06767083a5afb627c470
120.1 kB Preview Download
md5:dda68c8b9acb1d97172d5e8214a78919
119.1 kB Preview Download
md5:af8295032a015aeea3b3d05720bfb20e
102.9 kB Preview Download
md5:bd6f426ec2a72fd0f40540b4fa4a5a5a
95.2 kB Preview Download
md5:7e1fd290c78fbcc9bf5c0a941272dd36
115.3 kB Preview Download
md5:e18675b93708b310535e44174356ab1d
118.5 kB Preview Download
md5:fe5286e84a0b1b88e59da95bdc000af3
100.7 kB Preview Download
md5:0ead55efa4b010bff5acc526746a2c13
93.5 kB Preview Download
md5:8d1441ca29ce1d00e739c470493bd45f
116.5 kB Preview Download
md5:327accc1e4de13e905303fbf7133c8c9
113.8 kB Preview Download
md5:9b7b871b314c0a6f33f84e997226e0d0
118.3 kB Preview Download
md5:fc4f13fd60a4fb18a8cacc0d52f0d00f
109.8 kB Preview Download
md5:0ddeea809fe32b6be0a7f3c3ce2e2248
106.7 kB Preview Download
md5:c582ce16a05324ca846c10e3f666ee45
116.9 kB Preview Download
md5:1bcc7a6f293607f3bb4a9f38df49ea54
101.7 kB Preview Download
md5:68a19c6e6577951c94081e6257f3e99f
116.0 kB Preview Download
md5:43494cea10dd2ba3e18033e0564e4574
117.1 kB Preview Download
md5:8559b68e24490cda221663c8a07f859b
101.2 kB Preview Download
md5:3597d0baffe5bd0fc3e4a167349423a0
110.2 kB Preview Download
md5:7c3fa6ce6fce90472c4a51643a19ec5e
116.2 kB Preview Download
md5:3935b42c0b7000cc23247b544f84df19
118.2 kB Preview Download
md5:da5f372329b72959d6b2e98f22d6a272
100.6 kB Preview Download
md5:9ab3372a383b09220872c43fa680cfcc
120.2 kB Preview Download
md5:62f02d6aa6d740592b4966d8c8aa9bef
111.3 kB Preview Download
md5:866383300dd6dd3cacffc1858e14deca
120.5 kB Preview Download
md5:961bb6cee74fd721962b1b4aed485108
164.3 kB Preview Download
md5:ab1dae71d2287ff2606f49a603c1e8cc
160.7 kB Preview Download
md5:9f97e2dd6f6e102ea74fc590a824b721
167.3 kB Preview Download
md5:5869b8a8f95d7f9762e7164f304c9ebb
163.4 kB Preview Download
md5:306953dd9606199810f9022b575c7cb2
173.6 kB Preview Download
md5:7fe7c5599cabd5fce6c50dc7059c152c
160.7 kB Preview Download
md5:525703b1e1096c2f3d963addcff230d8
166.3 kB Preview Download
md5:384b233f08e183dfe0bb985403483b45
163.1 kB Preview Download
md5:97133dfed4f29a4e214177155c79d293
164.9 kB Preview Download
md5:9e6e3a7e9c5a67d7e069ac3b9a1dec47
164.5 kB Preview Download
md5:d50166c8f7d2699acd7f1ee257c8ebc1
165.5 kB Preview Download
md5:345b5b38c19b2639093bade02d5bd0a4
165.8 kB Preview Download
md5:58fd14d50494d33d176a6aa166a16460
162.6 kB Preview Download
md5:3178b204933d9612086475511d851744
157.9 kB Preview Download
md5:2d25d82d2a4fc92e79508d497928ffac
159.2 kB Preview Download
md5:66cf11938a14db178aa64066b264f7b8
164.2 kB Preview Download
md5:13a5828c1adc2162d1f8261142d8ad01
162.6 kB Preview Download
md5:49a60c0a2ac784d49abd9d888b2555f3
161.4 kB Preview Download
md5:d3437a9691852125a55bcf40c864e680
159.8 kB Preview Download
md5:a0890ab5f0b76967699420b01bcf1d93
163.6 kB Preview Download
md5:8080cfedf88435503eaf2c89ea7fcb70
163.3 kB Preview Download
md5:6d1a68cbb324f37e315228c08ca953ef
166.1 kB Preview Download
md5:2803e575679edce440086685e39ad47d
164.1 kB Preview Download
md5:0c0c906dc280df2f49e1251d5fa72a81
166.7 kB Preview Download
md5:85480ffd9acb149be7e502e973fe7608
164.1 kB Preview Download
md5:821e8347368b4cf6324ac15a856b160a
167.4 kB Preview Download
md5:a3cefe25abfd58b979479042752f5d06
173.0 kB Preview Download
md5:da30253a1a844eb7e877056a20201a39
169.3 kB Preview Download
md5:e93e92caad804a86fe7fd080ef85d50d
164.2 kB Preview Download
md5:068eaa6e4ac57b3f1151a17a4c20e58d
164.0 kB Preview Download
md5:8659f6e228cec18bf58ea3116c0d3acd
163.4 kB Preview Download
md5:b02dee903782a64f0c3f328a40d5cc34
171.1 kB Preview Download
md5:6f1606f4e502868f08314f3b4ba9a514
166.2 kB Preview Download
md5:c05499978825b9d7e4043c0c6cb79ade
167.6 kB Preview Download
md5:f0ac44664077682c6095bfcc286f0b26
159.8 kB Preview Download
md5:f2344cf28a16cd44cf90786e3f1c6d7c
166.5 kB Preview Download
md5:11b9f96f908031ee38779d72cab36b7b
164.2 kB Preview Download
md5:d798d4f4595def7af603ff11f19f0a53
162.9 kB Preview Download
md5:ba070598e30b4cf4e6dc495d77028457
160.9 kB Preview Download
md5:ce92b7228303807e8f695c0e4cc9e020
163.2 kB Preview Download
md5:09d5ecfb58ada8dd71bca5f70d1edfc8
162.6 kB Preview Download
md5:377537a0ebde169bf4e364c79663cd3b
167.4 kB Preview Download
md5:95910b4c70a99e3ee31cf71ad099079e
158.9 kB Preview Download
md5:6d33e9e70753cae299e77df392d1949f
164.5 kB Preview Download
md5:2b2ac516fc82d370a79cd26178d5b5e5
164.1 kB Preview Download
md5:a9aeaaa4d4190e1ebcf6d79e03f850c0
164.0 kB Preview Download
md5:e53cc85947e81437341adc309aba7b08
164.9 kB Preview Download
md5:dabc5b3740f788347f5ec07a68485ed7
165.2 kB Preview Download
md5:6686c3b83b7af493e7557e576b04e3e6
163.5 kB Preview Download
md5:e94a5c3fa0fc6e11de7ff69490630478
161.4 kB Preview Download
md5:85af326f9c7d00673e008600a925de14
1.4 kB Preview Download

Additional details

Related works

Is source of
10.5281/zenodo.4769677 (DOI)