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Published May 9, 2016 | Version v0.7
Software Open

ngl v0.7

  • 1. UCSD, RCSB PDB
  • 2. Charité Berlin

Description

Added

  • Store and Proxy classes for memory efficiency
  • MMTF, DXBIN, DCD files format parsers
  • 'unitcell' representation
  • stage.makeImage (returns Promise)
  • take NCS operations into account when creating unitcell & supercell assemblies
  • added multi sample antialias rendering
  • added support for spinning around an axis
  • use bitsets for storing selections of atoms
  • Assembly and AssemblyPart classes
  • stage.toggleFullscreen method
  • read occupancy data when available (mmCIF, pdb, mmtf)
  • occupancy color scheme
  • alternate location support in selections, e.g. %B
  • read insertion codes when available (mmCIF, pdb, mmtf)
  • insertion code support in selections, e.g. ^A
  • numeric residue name support in selections, e.g. [032]
  • Queue class to handle async tasks
Changed
  • fixed transformation matrix in mrc/ccp4 parser
  • optimized near clipping
  • Fiber class remanamed to Polymer
  • more consistent fog
  • use workers more sparsely due to the large overhead of creating them
  • create font SDF on demand, remove asset dependency
  • integrated three.js lighting into custom shaders
  • MIGRATION: chainname read from auth_asym_id instead of from label_asym_id field
  • DOC: clarified apache configuration for deployment
  • FIX: cif parser, ignore non-displayable bonds between symmetry mates
  • FIX: cif parser, struct_conn bonds not added for multiple altloc atoms
  • LIB: updated signals.js
  • LIB: updated promise.js
  • LIB: updated three.js
  • LIB: updated pako.js to pako_inflate.js (no deflation support needed)
  • CODE: support loading of Blob objects in addition to File objects
  • CODE: tweaked DistanceRepresentation visibility params
Removed
  • zip, lzma, bzip2 decompression
  • removed async.js
  • mdsrv related code and documentation
  • stage.exportImage (makes image and triggers download), use stage.makeImage

Files

ngl-v0.7.zip

Files (262.3 MB)

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md5:ddb9faa04295185d8f23b3775a6fb2b5
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Additional details

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