epiforecasts/covidregionaldata-0.9.2.zip
epiforecasts-covidregionaldata-1e4ebb5
.Rbuildignore
396 Bytes
.devcontainer
Dockerfile
1.7 kB
devcontainer.json
1.5 kB
library-scripts
common-debian.sh
17.9 kB
.github
.gitignore
7 Bytes
workflows
Belgium.yaml
1.5 kB
Brazil.yaml
1.5 kB
Canada.yaml
1.5 kB
Colombia.yaml
1.5 kB
Covid19DataHub.yaml
1.5 kB
Cuba.yaml
1.4 kB
ECDC.yaml
1.4 kB
France.yaml
1.5 kB
Germany.yaml
1.5 kB
Google.yaml
1.5 kB
India.yaml
1.4 kB
Italy.yaml
1.4 kB
JHU.yaml
1.4 kB
JRC.yaml
1.4 kB
Lithuania.yaml
1.5 kB
Mexico.yaml
1.5 kB
Netherlands.yaml
1.5 kB
SouthAfrica.yaml
1.5 kB
Switzerland.yaml
1.5 kB
UK.yaml
1.4 kB
USA.yaml
1.4 kB
WHO.yaml
1.4 kB
check-full.yaml
9.1 kB
draft-pdf.yml
680 Bytes
greetings.yml
671 Bytes
pr-checklist.yaml
1.5 kB
source_actions_exist.yaml
1.3 kB
stale.yml
493 Bytes
.gitignore
97 Bytes
.lintr
511 Bytes
.pre-commit-config.yaml
1.8 kB
CODE_OF_CONDUCT.md
5.2 kB
DESCRIPTION
4.2 kB
LICENSE
42 Bytes
LICENSE.md
1.1 kB
NAMESPACE
3.4 kB
NEWS.md
12.7 kB
R
Belgium.R
7.5 kB
Brazil.R
4.9 kB
Canada.R
4.0 kB
Colombia.R
3.1 kB
Covid19DataHub.R
5.5 kB
Cuba.R
3.1 kB
ECDC.R
5.8 kB
France.R
4.4 kB
Germany.R
4.4 kB
Google.R
7.6 kB
India.R
4.2 kB
Italy.R
3.8 kB
JHU.R
6.2 kB
JRC.R
5.1 kB
Lithuania.R
17.9 kB
Mexico.R
6.5 kB
Netherlands.R
4.1 kB
SouthAfrica.R
3.4 kB
Switzerland.R
4.8 kB
UK.R
21.6 kB
USA.R
4.9 kB
WHO.R
4.3 kB
datasets.R
1.6 kB
get_available_datasets.R
2.5 kB
get_info_covidregionaldata.R
488 Bytes
get_interventions_data.R
1.9 kB
get_linelist.R
3.9 kB
get_national_data.R
3.0 kB
get_regional_data.R
3.3 kB
processing.R
9.2 kB
shared-methods.R
26.0 kB
test-DataClass.R
7.7 kB
utils.R
9.4 kB
README.Rmd
7.6 kB
README.md
11.8 kB
_pkgdown.yml
2.6 kB
codecov.yml
176 Bytes
covidregionaldata.Rproj
343 Bytes
cran-comments.md
196 Bytes
data
JHU_codes.rda
23.1 kB
all_country_data.rda
2.8 kB
colombia_codes.rda
548 Bytes
france_codes.rda
1.8 kB
lithuania_codes.rda
1.3 kB
mexico_codes.rda
20.1 kB
uk_codes.rda
4.2 kB
data-raw
colombia_codes.R
1.4 kB
france_codes.R
2.2 kB
jhu_codes.R
397 Bytes
lithuania_codes.R
157 Bytes
lithuania_codes.csv
6.0 kB
mexico_codes.R
3.0 kB
mexico_codes.csv
89.1 kB
render_available_datasets.R
147 Bytes
uk_codes.R
2.0 kB
inst
CITATION
893 Bytes
CountryTemplate.R
1.5 kB
WORDLIST
719 Bytes
examples
overview.R
1.0 kB
github_workflow_template.yaml
1.5 kB
make_hexsticker.R
2.6 kB
paper
paper.bib
20.8 kB
paper.md
8.9 kB
test-github_workflow_present.R
480 Bytes
man
Belgium.Rd
6.8 kB
Brazil.Rd
6.5 kB
Canada.Rd
5.7 kB
Colombia.Rd
5.6 kB
CountryDataClass.Rd
5.5 kB
Covid19DataHub.Rd
7.4 kB
Cuba.Rd
5.5 kB
DataClass.Rd
16.3 kB
ECDC.Rd
6.3 kB
France.Rd
6.4 kB
Germany.Rd
6.4 kB
Google.Rd
8.3 kB
India.Rd
6.1 kB
Italy.Rd
5.6 kB
JHU.Rd
7.9 kB
JHU_codes.Rd
522 Bytes
JRC.Rd
7.0 kB
Lithuania.Rd
14.5 kB
Mexico.Rd
6.9 kB
Netherlands.Rd
6.7 kB
SouthAfrica.Rd
5.6 kB
Switzerland.Rd
6.7 kB
UK.Rd
13.0 kB
USA.Rd
6.2 kB
WHO.Rd
6.1 kB
add_extra_na_cols.Rd
745 Bytes
all_country_data.Rd
585 Bytes
calculate_columns_from_existing_data.Rd
800 Bytes
check_level.Rd
424 Bytes
colombia_codes.Rd
418 Bytes
complete_cumulative_columns.Rd
819 Bytes
csv_reader.Rd
661 Bytes
download_excel.Rd
761 Bytes
expect_clean_cols.Rd
795 Bytes
expect_columns_contain_data.Rd
837 Bytes
expect_processed_cols.Rd
928 Bytes
figures
README-g7_plot-1.png
66.5 kB
README-supported_region_plot-1.png
69.9 kB
README-uk_plot-1.png
58.2 kB
README-utla_plot-1.png
19.2 kB
lifecycle-archived.svg
968 Bytes
lifecycle-defunct.svg
965 Bytes
lifecycle-deprecated.svg
971 Bytes
lifecycle-experimental.svg
975 Bytes
lifecycle-maturing.svg
967 Bytes
lifecycle-questioning.svg
973 Bytes
lifecycle-stable.svg
957 Bytes
lifecycle-superseded.svg
972 Bytes
logo.png
416.8 kB
fill_empty_dates_with_na.Rd
847 Bytes
france_codes.Rd
409 Bytes
get_available_datasets.Rd
1.7 kB
get_info_covidregionaldata.Rd
532 Bytes
get_interventions_data.Rd
968 Bytes
get_linelist.Rd
1.2 kB
get_national_data.Rd
3.6 kB
get_regional_data.Rd
3.8 kB
glue_level.Rd
407 Bytes
initialise_dataclass.Rd
3.5 kB
lithuania_codes.Rd
655 Bytes
make_github_workflow.Rd
847 Bytes
make_new_data_source.Rd
1.2 kB
message_verbose.Rd
508 Bytes
mexico_codes.Rd
508 Bytes
pipe.Rd
427 Bytes
process_internal.Rd
1.4 kB
reexports.Rd
402 Bytes
region_dispatch.Rd
740 Bytes
reset_cache.Rd
282 Bytes
return_data.Rd
524 Bytes
roxygen
meta.R
478 Bytes
run_default_processing_fns.Rd
543 Bytes
run_optional_processing_fns.Rd
644 Bytes
set_negative_values_to_zero.Rd
544 Bytes
start_using_memoise.Rd
545 Bytes
stop_using_memoise.Rd
318 Bytes
test_cleaning.Rd
1.0 kB
test_download.Rd
1.1 kB
test_processing.Rd
1.1 kB
test_return.Rd
959 Bytes
totalise_data.Rd
467 Bytes
uk_codes.Rd
488 Bytes
tests
spelling.R
149 Bytes
testthat
custom_data
Belgium_level_1.rds
5.5 kB
Belgium_level_2.rds
4.9 kB
Brazil_level_1.rds
13.6 kB
Brazil_level_2.rds
13.6 kB
Canada_level_1.rds
16.9 kB
Colombia_level_1.rds
1.8 kB
Covid19DataHub_level_1.rds
5.1 kB
Covid19DataHub_level_2.rds
3.6 kB
Covid19DataHub_level_3.rds
2.7 kB
Cuba_level_1.rds
1.0 kB
ECDC_level_1.rds
3.6 kB
France_level_1.rds
5.0 kB
France_level_2.rds
3.0 kB
Germany_level_1.rds
3.1 kB
Germany_level_2.rds
3.1 kB
Google_level_1.rds
17.4 kB
Google_level_2.rds
17.4 kB
Google_level_3.rds
17.4 kB
India_level_1.rds
18.0 kB
Italy_level_1.rds
17.7 kB
JHU_level_1.rds
89.5 kB
JHU_level_2.rds
89.5 kB
JRC_level_1.rds
6.7 kB
JRC_level_2.rds
10.1 kB
Lithuania_level_1.rds
3.7 kB
Lithuania_level_2.rds
3.7 kB
Mexico_level_1.rds
9.0 kB
Mexico_level_2.rds
14.4 kB
Netherlands_level_1.rds
5.6 kB
Netherlands_level_2.rds
5.6 kB
SouthAfrica_level_1.rds
20.4 kB
Switzerland_level_1.rds
5.5 kB
UK_level_1.rds
11.6 kB
UK_level_1_nhs.rds
5.7 kB
UK_level_2.rds
2.3 kB
USA_level_1.rds
2.8 kB
USA_level_2.rds
4.2 kB
WHO_level_1.rds
3.0 kB
ecdc.csv
11.0 kB
ecdc.rds
64.8 kB
generate_data.R
872 Bytes
mexico_level_1_snap.rds
94.6 kB
mexico_level_2_snap.rds
99.8 kB
mtcars.csv
274 Bytes
who.rds
59.8 kB
custom_tests
expect_colname.R
105 Bytes
mock_data.R
9.4 kB
test-regional-dataset.R
316 Bytes
functions
dummy_class.R
820 Bytes
test_initialise.R
501 Bytes
test-CountryDataClass.R
554 Bytes
test-DataClass.R
3.1 kB
test-check_country_class.R
1.1 kB
test-csv_reader.R
843 Bytes
test-get_available_datasets.R
2.4 kB
test-get_info_covidregionaldata.R
198 Bytes
test-get_national_data.R
1.6 kB
test-get_regional_data.R
1.8 kB
test-initialise_dataclass.R
1.4 kB
test-message_verbose.R
377 Bytes
test-processing.R
4.1 kB
test-region_dispatch.R
1.1 kB
test-regional-datasets.R
1.7 kB
testthat.R
122 Bytes
vignettes
.gitignore
11 Bytes
quickstart.Rmd
6.8 kB
slowstart.Rmd
6.1 kB
supported-countries.Rmd
2.5 kB
testing.Rmd
5.5 kB