Published June 24, 2021 | Version v1
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Chart 1 from: Kavanaugh DH, Maddison DR, Simison WB, Schoville SD, Schmidt J, Faille A, Moore W, Pflug JM, Archambeault SL, Hoang T, Chen J-Y (2021) Phylogeny of the supertribe Nebriitae (Coleoptera, Carabidae) based on analyses of DNA sequence data. In: Spence J, Casale A, Assmann T, Liebherr JК, Penev L (Eds) Systematic Zoology and Biodiversity Science: A tribute to Terry Erwin (1940-2020). ZooKeys 1044: 41-152. https://doi.org/10.3897/zookeys.1044.62245

  • 1. California Academy of Sciences, San Francisco, United States of America
  • 2. Oregon State University, Corvallis, United States of America
  • 3. University of Wisconsin, Madison, United States of America
  • 4. University of Rostock, Rostock, Germany
  • 5. Stuttgart State Museum of Natural History, Stuttgart, Germany
  • 6. University of Arizona, Tucson, United States of America
  • 7. California Academy of Sciences, San Francisco, United States of America|University of California, Berkeley, United States of America
  • 8. California Academy of Sciences, San Francisco, United States of America|University of California, Santa Cruz, United States of America

Description

Chart 1 Support for or against various clades. All columns provide maximum likelihood bootstrap values for or against a particular clade, except for column "8G B," which shows the Bayesian posterior probability estimates for the eight-gene matrix. "8GML" shows the bootstrap values for the eight-gene concatenated matrix, "Nuc G" for the concatenated nuclear genes, "NPC G" for the concatenated nuclear protein-coding genes, and "Mito G" for the concatenated mitochondrial genes. The remaining eight columns provide values for the single gene analyses. All values are expressed as percentages, with positive numbers indicating support for a clade and negative numbers indicating support for a contradictory clade having the highest support. Specific contradictory clades from alternative trees are highlighted in medium grey. Cells with bootstrap values ≥ 90 are shown in black, with values between 75 and 89 in dark grey, and values from 50 to 74 in light grey. Cells in white indicate clades present in the ML tree, but with bootstrap values < 50. Cells in red have bootstrap values for a contradictory clade ≥ 50. Cells in pink have bootstrap values for or against a clade < 50, and the clade is not present in the ML tree. A "-" in a cell indicates that taxon sampling for that gene was not sufficient to assess monophyly of that clade. "#g" shows the number of single-gene analyses (maximum of eight) that support a clade with bootstrap values of 50 or more.

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Journal article: 10.3897/zookeys.1044.62245 (DOI)