Particle transport model readme

Summary of files

larval_dispersal_polcoms_multiyear

This is the main script for running the particle tracking model. Uses larva_class, mpa_class, grid_class. Main input file is input.dat. Outputs larval tracks in netCDF format.

larval_dispersal_polcoms_network_multiyear

This script takes the tracks output from larval_dispersal_polcoms_multiyear and computes the connections. Outputs are graphml files

larval_dispersal_polcoms_crossings

Takes the tracks output from larval_dispersal_polcoms_multiyear and calculates numbers of larvae crossing a given set of sections.

graph_*

These are various scripts for calculating correlations and graph theory metrics presented in the paper.