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Multilocus SSR genotypes of the lichen symbiotic green alga Sym5
Multilocus genotypes (7 microsatellite markers: LPh1-LPh7) of the photobiont Sym5 in two lichen communities sampled from 10 trees in Madeira (249 thalli) and Taiwan (205 thalli).
DalGrande_et_al_New_Phytol.xlsx
DNA alignment of the 18S gene in Fasta format
DNA alignment of the 18S gene in Fasta format
18S_alignment.fasta
Phylogenetic tree presented in Figure 1
Maximum Likelihood tree of the green algae inferred from 18S rRNA sequences
RAxML_result.18S.reduced_raxout.tre
Fig1: bootstrap values (1000 replicates)
Maximum Likelihood tree of the green algae inferred from 18S rRNA sequences with bootstrap values (1000 replicates)
RAxML_bipartitions.18S.reduced_raxout.tre
DNA alignment of the rbcL gene in Fasta format
DNA alignment of the rbcL gene in Fasta format
rbcL_alignment.fasta
Phylogenetic tree presented in Figure S1
Maximum Likelihood tree of the green algae inferred from rbcL sequences
RAxML_result.rbcL.reduced_raxout.tre
FigS1: bootstrap values (1000 replicates)
Maximum Likelihood tree of the green algae inferred from rbcL sequences with bootstrap values (1000 replicates)
RAxML_bipartitions.rbcL.reduced_raxout.tre
", "type": { "id": "notes", "title": { "de": "Anmerkungen", "en": "Notes" } } } ], "creators": [ { "affiliations": [ { "name": "Swiss Federal Institute for Forest, Snow and Landscape Research" } ], "person_or_org": { "family_name": "Dal Grande", "given_name": "Francesco", "name": "Dal Grande, Francesco", "type": "personal" } }, { "affiliations": [ { "name": "Swiss Federal Institute for Forest, Snow and Landscape Research" } ], "person_or_org": { "family_name": "Beck", "given_name": "Andreas", "name": "Beck, Andreas", "type": "personal" } }, { "affiliations": [ { "name": "Swiss Federal Institute for Forest, Snow and Landscape Research" } ], "person_or_org": { "family_name": "Cornejo", "given_name": "Carolina", "name": "Cornejo, Carolina", "type": "personal" } }, { "affiliations": [ { "name": "Swiss Federal Institute for Forest, Snow and Landscape Research" } ], "person_or_org": { "family_name": "Singh", "given_name": "Garima", "name": "Singh, Garima", "type": "personal" } }, { "affiliations": [ { "name": "Swiss Federal Institute for Forest, Snow and Landscape Research" } ], "person_or_org": { "family_name": "Cheenacharoen", "given_name": "Saran", "name": "Cheenacharoen, Saran", "type": "personal" } }, { "affiliations": [ { "name": "University of Chicago" } ], "person_or_org": { "family_name": "Nelsen", "given_name": "Matthew P.", "name": "Nelsen, Matthew P.", "type": "personal" } }, { "affiliations": [ { "name": "Swiss Federal Institute for Forest, Snow and Landscape Research" } ], "person_or_org": { "family_name": "Scheidegger", "given_name": "Christoph", "name": "Scheidegger, Christoph", "type": "personal" } } ], "description": "Dictyochloropsis s.l. is an ecologically important, common but little-studied genus of green algae. Here, we examined the diversity and host selectivity of algae attributed to this genus at both species-to-species and species-to-community levels. We conducted a molecular investigation of 15 cultured strains and several lichen photobionts, using 18S rRNA, rbcL and ITS sequence data. We further used seven alga-specific microsatellite markers to study algal sharing among fungi of the family Lobariaceae in two populations in Madeira and Taiwan (454 lichens). We found that the genus Dictyochloropsis s.l. is polyphyletic. Dictyochloropsis clade 1 comprises only free-living algae whereas Dictyochloropsis clade 2 includes lichenized algae as well as free-living algae. Fungal selectivity towards algae belonging to Dictyochloropsis clade 2 is high. Selectivity varies geographically, with photobionts being restricted to a single region. Finally, we showed that Dictyochloropsis clade 2 individuals are shared among different fungal hosts in communities of lichens of the Lobariaceae. As for other green algal lineages, there is a high amount of cryptic diversity in Dictyochloropsis. Furthermore, co-evolution between Dictyochloropsis clade 2 algae and representatives of the Lobariaceae is manifested at the community level, with several unrelated fungal species being horizontally connected by shared photobiont clones.", "locations": { "features": [ { "place": "South America" }, { "place": "New Zealand" }, { "place": "Macaronesia" }, { "place": "Central America" }, { "place": "Europe" }, { "place": "East Asia" }, { "place": "North America" } ] }, "publication_date": "2014-04-17", "publisher": "Zenodo", "related_identifiers": [ { "identifier": "10.1111/nph.12678", "relation_type": { "id": "iscitedby", "title": { "de": "Wird zitiert von", "en": "Is cited by" } }, "scheme": "doi" } ], "resource_type": { "id": "dataset", "title": { "de": "Datensatz", "en": "Dataset" } }, "rights": [ { "description": { "en": "CC0 waives copyright interest in a work you've created and dedicates it to the world-wide public domain. Use CC0 to opt out of copyright entirely and ensure your work has the widest reach." }, "icon": "cc-cc0-icon", "id": "cc0-1.0", "props": { "scheme": "spdx", "url": "https://creativecommons.org/publicdomain/zero/1.0/legalcode" }, "title": { "en": "Creative Commons Zero v1.0 Universal" } } ], "subjects": [ { "subject": "Lobariaceae" }, { "subject": "photobiont" }, { "subject": "ITS" }, { "subject": "lichen" }, { "subject": "18S" }, { "subject": "rbcL" }, { "subject": "Dictyochloropsis" } ], "title": "Data from: Molecular phylogeny and symbiotic selectivity of the green algal genus Dictyochloropsis sensu lato (Trebouxiophyceae): a polyphyletic and widespread group forming photobiont-mediated guilds in the lichen family Lobariaceae" }, "parent": { "access": { "owned_by": { "user": "90070" } }, "communities": { "default": "734b6452-1f40-4db0-b218-08ab1d568b7f", "entries": [ { "access": { "member_policy": "open", "members_visibility": "public", "record_submission_policy": "open", "review_policy": "open", "visibility": "public" }, "children": { "allow": false }, "created": "2020-02-04T14:03:17.992421+00:00", "custom_fields": {}, "deletion_status": { "is_deleted": false, "status": "P" }, "id": "734b6452-1f40-4db0-b218-08ab1d568b7f", "links": {}, "metadata": { "curation_policy": "

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", "description": "Dryad is an international open-access repository of research data, especially data underlying scientific and medical publications. Dryad is a curated general-purpose repository that makes data discoverable, freely reusable, and citable.", "organizations": [ { "id": "00x6h5n95" } ], "page": "

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