README

This is a raw hologram video sequence recorded on the instrument described in the referencing paper. It is an off-axis system, where the holograms may be reconstructed into intensity and phase images. Several software packages exist for hologram reconstruction. See the following to get started:

http://onlinelibrary.wiley.com/doi/10.1002/9781118562567.app1/pdf

For MATLAB: HoloRec3D (free package)

http://sourceforge.net/directory/os:mac/?q=digital%20hologram%20reconstruction

All of the holograms associated with this publication use the same Fourier mask, which is provided as a tiff file. 

For this specific file, the timestamps for the video are given on the following page. The z-planes used in the still images in the paper are the following: z= Ð23, Ð18, Ð16, Ð12


Reconstructions and more information may be found on our public database, motility.caltech.edu. We encourage you to contact us with any questions you may have about the data, the instrument, or the reconstructions.


Timestamps
00000 06:14:49.245 2015.03.30 0

00001 06:14:49.440 2015.03.30 195.0111

00002 06:14:49.532 2015.03.30 287.0164

00003 06:14:49.627 2015.03.30 382.0218

00004 06:14:49.721 2015.03.30 476.0272

00005 06:14:49.813 2015.03.30 568.0324

00006 06:14:49.907 2015.03.30 662.0378

00007 06:14:50.004 2015.03.30 759.0434

00008 06:14:50.101 2015.03.30 856.0489

00009 06:14:50.189 2015.03.30 944.054

00010 06:14:50.281 2015.03.30 1036.0592

00011 06:14:50.375 2015.03.30 1130.0646

00012 06:14:50.471 2015.03.30 1226.0701

00013 06:14:50.562 2015.03.30 1317.0753

00014 06:14:50.656 2015.03.30 1411.0807

00015 06:14:50.750 2015.03.30 1505.086

00016 06:14:50.843 2015.03.30 1598.0914

00017 06:14:50.938 2015.03.30 1693.0968

00018 06:14:51.038 2015.03.30 1793.1025

00019 06:14:51.145 2015.03.30 1900.1086

00020 06:14:51.257 2015.03.30 2012.115

00021 06:14:51.363 2015.03.30 2118.1211

00022 06:14:51.475 2015.03.30 2230.1275

00023 06:14:51.573 2015.03.30 2328.1331

00024 06:14:51.705 2015.03.30 2460.1407

00025 06:14:51.812 2015.03.30 2567.1468

00026 06:14:51.906 2015.03.30 2661.1522

00027 06:14:51.998 2015.03.30 2753.1574

00028 06:14:52.091 2015.03.30 2846.1627

00029 06:14:52.184 2015.03.30 2939.1681

00030 06:14:52.278 2015.03.30 3033.1734

00031 06:14:52.372 2015.03.30 3127.1788

00032 06:14:52.466 2015.03.30 3221.1842

00033 06:14:52.560 2015.03.30 3315.1896

00034 06:14:52.652 2015.03.30 3407.1948

00035 06:14:52.746 2015.03.30 3501.2002

00036 06:14:52.849 2015.03.30 3604.2061

00037 06:14:52.933 2015.03.30 3688.2109

00038 06:14:53.027 2015.03.30 3782.2163

00039 06:14:53.121 2015.03.30 3876.2217

00040 06:14:53.220 2015.03.30 3975.2273

00041 06:14:53.307 2015.03.30 4062.2323

00042 06:14:53.503 2015.03.30 4258.2435

00043 06:14:53.402 2015.03.30 4157.2377

00044 06:14:53.589 2015.03.30 4344.2484

00045 06:14:53.683 2015.03.30 4438.2538

00046 06:14:53.775 2015.03.30 4530.2591

00047 06:14:53.869 2015.03.30 4624.2644

00048 06:14:53.964 2015.03.30 4719.2699

00049 06:14:54.059 2015.03.30 4814.2753

00050 06:14:54.158 2015.03.30 4913.281

00051 06:14:54.244 2015.03.30 4999.2859

00052 06:14:54.338 2015.03.30 5093.2913

00053 06:14:54.436 2015.03.30 5191.2969

00054 06:14:54.524 2015.03.30 5279.3019

00055 06:14:54.618 2015.03.30 5373.3073

00056 06:14:54.712 2015.03.30 5467.3127

00057 06:14:54.806 2015.03.30 5561.318

00058 06:14:54.900 2015.03.30 5655.3234

00059 06:14:54.992 2015.03.30 5747.3287

00060 06:14:55.086 2015.03.30 5841.3341

00061 06:14:55.180 2015.03.30 5935.3394

00062 06:14:55.274 2015.03.30 6029.3448

00063 06:14:55.368 2015.03.30 6123.3502

00064 06:14:55.460 2015.03.30 6215.3555

00065 06:14:55.554 2015.03.30 6309.3608

00066 06:14:55.648 2015.03.30 6403.3662

00067 06:14:55.743 2015.03.30 6498.3716

00068 06:14:55.836 2015.03.30 6591.377

00069 06:14:55.928 2015.03.30 6683.3822

00070 06:14:56.022 2015.03.30 6777.3876

00071 06:14:56.116 2015.03.30 6871.393

00072 06:14:56.210 2015.03.30 6965.3984

00073 06:14:56.302 2015.03.30 7057.4036

00074 06:14:56.408 2015.03.30 7163.4097

00075 06:14:56.490 2015.03.30 7245.4144

00076 06:14:56.584 2015.03.30 7339.4197

00077 06:14:56.678 2015.03.30 7433.4251

00078 06:14:56.779 2015.03.30 7534.4309

00079 06:14:56.864 2015.03.30 7619.4358

00080 06:14:56.958 2015.03.30 7713.4411

00081 06:14:57.052 2015.03.30 7807.4465

00082 06:14:57.146 2015.03.30 7901.4519

00083 06:14:57.238 2015.03.30 7993.4572

00084 06:14:57.332 2015.03.30 8087.4625

00085 06:14:57.426 2015.03.30 8181.4679

00086 06:14:57.520 2015.03.30 8275.4733

00087 06:14:57.613 2015.03.30 8368.4786

00088 06:14:57.707 2015.03.30 8462.484

00089 06:14:57.801 2015.03.30 8556.4894

00090 06:14:57.895 2015.03.30 8650.4947

00091 06:14:57.987 2015.03.30 8742.5

00092 06:14:58.081 2015.03.30 8836.5054

00093 06:14:58.269 2015.03.30 9024.5161

00094 06:14:58.181 2015.03.30 8936.5111

00095 06:14:58.363 2015.03.30 9118.5215

00096 06:14:58.461 2015.03.30 9216.5271

00097 06:14:58.550 2015.03.30 9305.5322

00098 06:14:58.642 2015.03.30 9397.5375

00099 06:14:58.736 2015.03.30 9491.5428

00100 06:14:58.830 2015.03.30 9585.5482

00101 06:14:58.924 2015.03.30 9679.5536

00102 06:14:59.018 2015.03.30 9773.559

00103 06:14:59.110 2015.03.30 9865.5642

00104 06:14:59.204 2015.03.30 9959.5696

00105 06:14:59.301 2015.03.30 10056.5752

00106 06:14:59.394 2015.03.30 10149.5805

00107 06:14:59.486 2015.03.30 10241.5857

00108 06:14:59.580 2015.03.30 10335.5911

00109 06:14:59.672 2015.03.30 10427.5964

00110 06:14:59.769 2015.03.30 10524.6019

00111 06:14:59.859 2015.03.30 10614.6071

00112 06:14:59.953 2015.03.30 10708.6125

00113 06:15:00.047 2015.03.30 10802.6178

00114 06:15:00.141 2015.03.30 10896.6232

00115 06:15:00.233 2015.03.30 10988.6285

00116 06:15:00.327 2015.03.30 11082.6338

00117 06:15:00.515 2015.03.30 11270.6446

00118 06:15:00.421 2015.03.30 11176.6392

00119 06:15:00.609 2015.03.30 11364.65

00120 06:15:00.702 2015.03.30 11457.6553

00121 06:15:00.796 2015.03.30 11551.6607

00122 06:15:00.889 2015.03.30 11644.666

00123 06:15:00.985 2015.03.30 11740.6715

00124 06:15:01.077 2015.03.30 11832.6767

00125 06:15:01.169 2015.03.30 11924.682

00126 06:15:01.263 2015.03.30 12018.6874

00127 06:15:01.357 2015.03.30 12112.6928

00128 06:15:01.451 2015.03.30 12206.6981

00129 06:15:01.545 2015.03.30 12300.7035

00130 06:15:01.637 2015.03.30 12392.7088

00131 06:15:01.732 2015.03.30 12487.7142

00132 06:15:01.829 2015.03.30 12584.7198

00133 06:15:01.919 2015.03.30 12674.7249

00134 06:15:02.013 2015.03.30 12768.7303

00135 06:15:02.105 2015.03.30 12860.7355

00136 06:15:02.199 2015.03.30 12954.7409

00137 06:15:02.293 2015.03.30 13048.7463

00138 06:15:02.393 2015.03.30 13148.752

00139 06:15:02.480 2015.03.30 13235.757

00140 06:15:02.574 2015.03.30 13329.7624

00141 06:15:02.668 2015.03.30 13423.7678

00142 06:15:02.761 2015.03.30 13516.7731

00143 06:15:02.874 2015.03.30 13629.7795

00144 06:15:02.971 2015.03.30 13726.7851

00145 06:15:03.100 2015.03.30 13855.7925

00146 06:15:03.312 2015.03.30 14067.8046

00147 06:15:03.202 2015.03.30 13957.7983

00148 06:15:03.412 2015.03.30 14167.8103

00149 06:15:03.526 2015.03.30 14281.8168

00150 06:15:03.639 2015.03.30 14394.8233

00151 06:15:03.775 2015.03.30 14530.8311

00152 06:15:03.878 2015.03.30 14633.837

00153 06:15:04.113 2015.03.30 14868.8504

00154 06:15:04.008 2015.03.30 14763.8444

00155 06:15:04.222 2015.03.30 14977.8566

00156 06:15:04.325 2015.03.30 15080.8625

00157 06:15:04.458 2015.03.30 15213.8701

00158 06:15:04.559 2015.03.30 15314.8759

00159 06:15:04.701 2015.03.30 15456.884

00160 06:15:04.807 2015.03.30 15562.8901

00161 06:15:04.913 2015.03.30 15668.8962

00162 06:15:05.016 2015.03.30 15771.9021

00163 06:15:05.132 2015.03.30 15887.9087

00164 06:15:05.237 2015.03.30 15992.9147

00165 06:15:05.363 2015.03.30 16118.9219

00166 06:15:05.470 2015.03.30 16225.928

00167 06:15:05.679 2015.03.30 16434.94

00168 06:15:05.583 2015.03.30 16338.9345

00169 06:15:05.790 2015.03.30 16545.9463

00170 06:15:05.920 2015.03.30 16674.9537

00171 06:15:06.026 2015.03.30 16780.9598

00172 06:15:06.132 2015.03.30 16886.9658

00173 06:15:06.243 2015.03.30 16997.9722

00174 06:15:06.359 2015.03.30 17113.9788

00175 06:15:06.491 2015.03.30 17245.9864

00176 06:15:06.593 2015.03.30 17347.9922

00177 06:15:06.724 2015.03.30 17478.9997

00178 06:15:06.826 2015.03.30 17581.0055

00179 06:15:06.961 2015.03.30 17716.0133

00180 06:15:07.063 2015.03.30 17818.0191

00181 06:15:07.176 2015.03.30 17931.0256

00182 06:15:07.272 2015.03.30 18027.031

00183 06:15:07.410 2015.03.30 18165.0389

00184 06:15:07.518 2015.03.30 18273.0451

00185 06:15:07.642 2015.03.30 18397.0522

00186 06:15:07.744 2015.03.30 18499.058

00187 06:15:07.894 2015.03.30 18649.0666

00188 06:15:08.000 2015.03.30 18755.0727

00189 06:15:08.236 2015.03.30 18991.0862

00190 06:15:08.117 2015.03.30 18872.0794

00191 06:15:08.375 2015.03.30 19130.0941

00192 06:15:08.476 2015.03.30 19231.0999

00193 06:15:08.602 2015.03.30 19357.1071

00194 06:15:08.716 2015.03.30 19471.1136

00195 06:15:08.833 2015.03.30 19588.1203

00196 06:15:08.933 2015.03.30 19688.1261

00197 06:15:09.062 2015.03.30 19817.1334

00198 06:15:09.171 2015.03.30 19926.1397

00199 06:15:09.304 2015.03.30 20059.1473

00200 06:15:09.416 2015.03.30 20171.1537