Add custom metadata item

DEPRECATED: Please use "Global variables" module instead, which allows custom values to be accessed using the V{[NAME]} notation.

Add overlay

DEPRECATED - Please use individual overlay modules (e.

Binary operations (legacy)

DEPRECATED: This Module has been superseeded by separate Modules for 2D and 3D binary operations.

Channel extractor

DEPRECATED: Please use ExtractSubstack module.

Filter objects

DEPRECATED: Please use individual filter modules instead (e.

GUI condition

DEPRECATED: Please use "Global variables" module (in "Choice" mode) in conjunction with "Fixed text condition", which offer equivalent functionality.

Measure spot intensity

DEPRECATED: Please use separate "Get local object region" and "Measure object intensity" modules.

Merge channels

DEPRECATED: This Module has been superseeded by the more generalised "Concatenate stacks" Module.

Register images

DEPRECATED: Please use separate automatic and manual modules instead.

Relate objects

Relate objects of two classes based on a variety of metrics (e.

Resolve co-occurrence

Identifies overlapping objects and moves them to a new object collection Objects are linked on a one-to-one basis.

Threshold image

Binarise an image in the workspace such that the output only has pixel values of 0 and 255.