This file contains all the analytical code to reproduce all the analyses and figures in Serrato-Capuchina et al.
Analysis appear in the order in which they appear in the manuscript. Code to generate the supplementary figures appears at the end of the file.

FIGURE 1
Requires the following files:
figure1_boxplots.csv
	yak_male_choice_prop.csv
	santomea_male_choice_prop.csv
	simulan_male_choice_prop.csv
	mau_male_choice_prop.csv
Execute Line 6 in hybrid_CHC_code_Dryad_01172021

TABLE 1
Requires the following files:
	yak_male_choice_prop.csv
	santomea_male_choice_prop.csv
	simulan_male_choice_prop.csv
	mau_male_choice_prop.csv
Execute Line 47 in hybrid_CHC_code_Dryad_01172021

FIGURE 2
Requires the following files:
	male_matings_CHC_byfemale.csv
Execute Line 240 in hybrid_CHC_code_Dryad_01172021

FIGURE 3
Requires the following files:
	yak_latency_duration.csv
	santomea_latency_duration.csv
	sim_latency_duration.csv
	mau_latency_duration.csv
Execute Line 264  in hybrid_CHC_code_Dryad_01172021


TABLE 2
Requires the following files:
	yak_latency_duration.csv
	santomea_latency_duration.csv
	sim_latency_duration.csv
	mau_latency_duration.csv
Execute Line 299  in hybrid_CHC_code_Dryad_01172021

FIGURE 4
Requires the following files:
	CHC_san_yak_fulldata.csv
	mau_sim_f1.csv
Execute Line 744 in hybrid_CHC_code_Dryad_01172021

TABLE 3
Requires the following files:
	CHC_san_yak_fulldata.csv
	mau_sim_f1.csv
Execute Line 801 in hybrid_CHC_code_Dryad_01172021

FIGURE 5
Requires the following files:
	simulans_perfumed.csv
Execute Line 903 in hybrid_CHC_code_Dryad_01172021

TABLE 4
	Requires the following files:
	simulans_perfumed.csv
Execute Line 911 in hybrid_CHC_code_Dryad_01172021


FIGURE 6
Requires the following files:
	boxplots_perfuming_hybrids.csv
Execute Line 1089 in hybrid_CHC_code_Dryad_01172021

FIGURE 7
Requires the following files:
	boxplots_perfuming_pure_species.csv
Execute Line 1199 in hybrid_CHC_code_Dryad_01172021

FIGURE S1 
Execute Line 1430 in hybrid_CHC_code_Dryad_01172021


FIGURE S2
Execute Line 1506 in hybrid_CHC_code_Dryad_01172021

FIGURE S3
Requires the following files:
	yakuba_dm.csv 
	simulans_dm.csv
	santomea_dm.csv
	mauritiana_dm.csv
Execute Line 1584 in hybrid_CHC_code_Dryad_01172021

FIGURE S4
Requires the following files:
	calibration_curves.csv
Execute Line 1598 in hybrid_CHC_code_Dryad_01172021

FIGURE S5
Requires the following files:
	double_scoring_lm.csv
Execute Line 1643 in hybrid_CHC_code_Dryad_01172021

FIGURE S6
Requires the following files:
	CHC_san_yak_fulldata.csv
Execute Line 1667 in hybrid_CHC_code_Dryad_01172021

FIGURE S7
Requires the following files:
	mau_sim_f1.csv 
Execute Line 1689 in hybrid_CHC_code_Dryad_01172021

FIGURE S8
Requires the following files:
	mauritiana_perfumed.csv
Execute Line 976 in hybrid_CHC_code_Dryad_01172021

FIGURE S9
Requires the following files:
	F1hybrids_perfumed.csv
Execute Line 1032 in hybrid_CHC_code_Dryad_01172021


FIGURE S10
Requires the following files:
	simulans_perfumed.csv 
Execute Line 1712 in hybrid_CHC_code_Dryad_01172021

FIGURE S11
Requires the following files:
	mauritiana_perfumed.csv 
Execute Line 1733 in hybrid_CHC_code_Dryad_01172021

FIGURE S12
Requires the following files:
	F1hybrids_perfumed.csv 
Execute Line 1756 in hybrid_CHC_code_Dryad_01172021