I_ATAC_Example_Dataset1.zip
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2
.DS_Store
6.1 kB
Example_with_gz_files_Example_with_gz_files.sh
9.0 kB
FastQC
.DS_Store
6.1 kB
Firt_SampleData_R1_fastqc
.DS_Store
6.1 kB
Icons
.DS_Store
6.1 kB
error.png
1.6 kB
fastqc_icon.png
1.2 kB
tick.png
1.7 kB
warning.png
1.4 kB
Images
.DS_Store
6.1 kB
adapter_content.png
9.0 kB
duplication_levels.png
17.5 kB
per_base_n_content.png
8.4 kB
per_base_quality.png
9.0 kB
per_base_sequence_content.png
40.8 kB
per_sequence_gc_content.png
30.0 kB
per_sequence_quality.png
15.4 kB
per_tile_quality.png
4.0 kB
sequence_length_distribution.png
19.3 kB
fastqc.fo
6.0 kB
fastqc_data.txt
8.3 kB
fastqc_report.html
259.6 kB
summary.txt
638 Bytes
Firt_SampleData_R1_fastqc.html
259.6 kB
Firt_SampleData_R1_fastqc.zip
273.6 kB
Firt_SampleData_R2_fastqc.html
256.0 kB
Firt_SampleData_R2_fastqc.zip
267.3 kB
trimmomatic
.DS_Store
8.2 kB
Firt_SampleData_R1.fastq_filtered
694.8 kB
Firt_SampleData_R1.trimU.fastq
15.6 kB
Firt_SampleData_R2.fastq_filtered
694.7 kB
Firt_SampleData_R2.trimU.fastq
3.4 kB
bwa
.DS_Store
10.2 kB
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2.sam
1.1 MB
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_rmdup.sam
1.2 MB
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_rmdup_insertSize.txt
4.4 kB
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_rmdup_metrics.pdf
8.0 kB
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_rmdup_metrics.txt
2.7 kB
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_rmdup_shifted.bam
229.2 kB
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_rmdup_shifted_sorted.bam
229.0 kB
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_rmdup_shifted_sorted.bam.bai
1.5 MB
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_rmdup_shifted_sorted.bam_sorted.bed
281.3 kB
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_sorted.sam
1.1 MB
macs2
.DS_Store
8.2 kB
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_rmdup_shifted_sorted.bam_sorted_control_lambda.bdg
176.9 kB
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_rmdup_shifted_sorted.bam_sorted_peaks.broadPeak
0 Bytes
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_rmdup_shifted_sorted.bam_sorted_peaks.gappedPeak
0 Bytes
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_rmdup_shifted_sorted.bam_sorted_peaks.xls
1.4 kB
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_rmdup_shifted_sorted.bam_sorted_treat_pileup.bdg
200.9 kB
__MACOSX
Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2
._.DS_Store
120 Bytes
FastQC
._.DS_Store
120 Bytes
Firt_SampleData_R1_fastqc
._.DS_Store
120 Bytes
Icons
._.DS_Store
120 Bytes
Images
._.DS_Store
120 Bytes
._per_base_quality.png
177 Bytes
._per_base_sequence_content.png
177 Bytes
._per_sequence_gc_content.png
177 Bytes
._per_sequence_quality.png
177 Bytes
trimmomatic
._.DS_Store
120 Bytes
bwa
._.DS_Store
120 Bytes
._Example_with_gz_files_Firt_SampleData_R1_Firt_SampleData_R2_rmdup_metrics.pdf
177 Bytes
macs2
._.DS_Store
120 Bytes