PoreMS 0.2
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        • Pore.fill_sites

    Pore.fill_sites¶

    Pore.fill_sites(self, sites, normal, site_type)¶

    Fill list of given sites that are empty with silanol and geminal silanol molecules, respectively.

    Parameters:
    sites : list

    List of silicon ids

    normal : function

    Function that returns the normal vector of the surface for a given position

    site_type : string, optional

    Site type - interior in, exterior ex

    Returns:
    mol_list : list

    List of molecule objects that are attached on the surface

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