(TS=(Mass Cytometry  OR  Cytometry  by  Time  of  Flight  OR  CyTOF))  AND DOCUMENT TYPES: (Article OR  Review);;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
Timespan=2010-2019. Indexes=SCI-EXPANDED, SSCI, A&HCI, CPCI-S, CPCI-SSH, BKCI-S, BKCI-SSH, ESCI, CCR-EXPANDED, IC.;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
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;;Total Publications by Year;;;;;;;;;Sum of Times Cited by Year;;;;;;;;;;;;;;;;;;;
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Results found;937;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
Sum of the Times Cited;25801;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
Average Citations per Item;27,54;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
h-index;71;;;;;;;;;;;;;;;;;;;;;;;;;;;;;
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Title;Authors;Corporate Authors;Editors;Book Editors;Source Title;Publication Date;Publication Year;Volume;Issue;Part Number;Supplement;Special Issue;Beginning Page;Ending Page;Article Number;DOI;Conference Title;Conference Date;Total Citations;Average per Year;2010;2011;2012;2013;2014;2015;2016;2017;2018;2019
Single-Cell Mass Cytometry of Differential Immune and Drug Responses Across a Human Hematopoietic Continuum;"Bendall, Sean C.; Simonds, Erin F.; Qiu, Peng; Amir, El-ad D.; Krutzik, Peter O.; Finck, Rachel; Bruggner, Robert V.; Melamed, Rachel; Trejo, Angelica; Ornatsky, Olga I.; Balderas, Robert S.; Plevritis, Sylvia K.; Sachs, Karen; Pe'er, Dana; Tanner, Scott D.; Nolan, Garry P.";;;;SCIENCE;MAY 6 2011;2011;332;6030;;;;687;696;;10.1126/science.1198704;;;1233;123,3;0;17;96;114;140;152;155;183;143;166
viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia;"Amir, El-ad David; Davis, Kara L.; Tadmor, Michelle D.; Simonds, Erin F.; Levine, Jacob H.; Bendall, Sean C.; Shenfeld, Daniel K.; Krishnaswamy, Smita; Nolan, Garry P.; Pe'er, Dana";;;;NATURE BIOTECHNOLOGY;JUN 2013;2013;31;6;;;;545;+;;10.1038/nbt.2594;;;716;89,5;0;0;0;1;32;66;85;132;156;184
Highly multiplexed imaging of tumor tissues with subcellular resolution by mass cytometry;"Giesen, Charlotte; Wang, Hao A. O.; Schapiro, Denis; Zivanovic, Nevena; Jacobs, Andrea; Hattendorf, Bodo; Schueffler, Peter J.; Grolimund, Daniel; Buhmann, Joachim M.; Brandt, Simone; Varga, Zsuzsanna; Wild, Peter J.; Guenther, Detlef; Bodenmiller, Bernd";;;;NATURE METHODS;APR 2014;2014;11;4;;;;417;+;;10.1038/NMETH.2869;;;500;71,43;0;0;0;0;15;60;75;84;100;114
Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE;"Qiu, Peng; Simonds, Erin F.; Bendall, Sean C.; Gibbs, Kenneth D., Jr.; Bruggner, Robert V.; Linderman, Michael D.; Sachs, Karen; Nolan, Garry P.; Plevritis, Sylvia K.";;;;NATURE BIOTECHNOLOGY;OCT 2011;2011;29;10;;;;886;U181;;10.1038/nbt.1991;;;498;49,8;0;0;18;26;40;66;79;85;66;84
Standardizing immunophenotyping for the Human Immunology Project;"Maecker, Holden T.; McCoy, J. Philip; Nussenblatt, Robert";;;;NATURE REVIEWS IMMUNOLOGY;MAR 2012;2012;12;3;;;;191;200;;10.1038/nri3158;;;450;50;0;0;15;28;38;56;57;61;76;86
A polarizing question: do M1 and M2 microglia exist?;Ransohoff, Richard M.;;;;NATURE NEUROSCIENCE;AUG 2016;2016;19;8;;;;987;991;;10.1038/nn.4338;;;435;87;0;0;0;0;0;1;7;83;128;146
Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis;"Levine, Jacob H.; Simonds, Erin F.; Bendall, Sean C.; Davis, Kara L.; Amir, El-ad D.; Tadmor, Michelle D.; Litvin, Oren; Fienberg, Harris G.; Jager, Astraea; Zunder, Eli R.; Finck, Rachel; Gedman, Amanda L.; Radtke, Ina; Downing, James R.; Pe'er, Dana; Nolan, Garry P.";;;;CELL;JUL 2 2015;2015;162;1;;;;184;197;;10.1016/j.cell.2015.05.047;;;413;68,83;0;0;0;0;0;5;44;64;98;145
Single-Cell Trajectory Detection Uncovers Progression and Regulatory Coordination in Human B Cell Development;"Bendall, Sean C.; Davis, Kara L.; Amir, El-ad David; Tadmor, Michelle D.; Simonds, Erin F.; Chen, Tiffany J.; Shenfeld, Daniel K.; Nolan, Garry P.; Pe'er, Dana";;;;CELL;APR 24 2014;2014;157;3;;;;714;725;;10.1016/j.cell.2014.04.005;;;377;53,86;0;0;0;0;7;46;65;68;80;80
Cytometry by Time-of-Flight Shows Combinatorial Cytokine Expression and Virus-Specific Cell Niches within a Continuum of CD8(+) T Cell Phenotypes;"Newell, Evan W.; Sigal, Natalia; Bendall, Sean C.; Nolan, Garry P.; Davis, Mark M.";;;;IMMUNITY;JAN 27 2012;2012;36;1;;;;142;152;;10.1016/j.immuni.2012.01.002;;;360;40;0;0;17;47;56;54;54;44;42;32
A deep profiler's guide to cytometry;"Bendall, Sean C.; Nolan, Garry P.; Roederer, Mario; Chattopadhyay, Pratip K.";;;;TRENDS IN IMMUNOLOGY;JUL 2012;2012;33;7;;;;323;332;;10.1016/j.it.2012.02.010;;;351;39;0;0;9;30;38;43;57;54;49;54
Mass Cytometry: Single Cells, Many Features;"Spitzer, Matthew H.; Nolan, Garry P.";;;;CELL;MAY 5 2016;2016;165;4;;;;780;791;;10.1016/j.cell.2016.04.019;;;341;68,2;0;0;0;0;0;0;4;64;94;131
Multiplexed mass cytometry profiling of cellular states perturbed by small-molecule regulators;"Bodenmiller, Bernd; Zunder, Eli R.; Finck, Rachel; Chen, Tiffany J.; Savig, Erica S.; Bruggner, Robert V.; Simonds, Erin F.; Bendall, Sean C.; Sachs, Karen; Krutzik, Peter O.; Nolan, Garry P.";;;;NATURE BIOTECHNOLOGY;SEP 2012;2012;30;9;;;;858;U89;;10.1038/nbt.2317;;;292;32,44;0;0;1;26;54;41;38;50;29;37
Distinct Cellular Mechanisms Underlie Anti-CTLA-4 and Anti-PD-1 Checkpoint Blockade;"Wei, Spencer C.; Levine, Jacob H.; Cogdill, Alexandria P.; Zhao, Yang; Anang, Nana-Ama A. S.; Andrews, Miles C.; Sharma, Padmanee; Wang, Jing; Wargo, Jennifer A.; Pe'er, Dana; Allison, James P.";;;;CELL;SEP 7 2017;2017;170;6;;;;1120;1133;;10.1016/j.cell.2017.07.024;;;285;71,25;0;0;0;0;0;0;0;7;107;110
Unsupervised High-Dimensional Analysis Aligns Dendritic Cells across Tissues and Species;"Guilliams, Martin; Dutertre, Charles-Antoine; Scott, Charlotte L.; McGovern, Naomi; Sichien, Dorine; Chakarov, Svetoslav; Van Gassen, Sofie; Chen, Jinmiao; Poidinger, Michael; De Prijck, Sofie; Tavernier, Simon J.; Low, Ivy; Irac, Sergio Erdal; Mattar, Citra Nurfarah; Sumatoh, Hermi Rizal; Low, Gillian Hui Ling; Chung, Tam John Kit; Chan, Dedrick Kok Hong; Tan, Ker Kan; Hon, Tony Lim Kiat; Fossum, Even; Bogen, Bjame; Choolani, Mahesh; Chan, Jerry Kok Yen; Larbi, Anis; Luche, Herve; Henri, Sandrine; Saeys, Yvan; Newell, Evan William; Lambrecht, Bart N.; Malissen, Bernard; Ginhoux, Florent";;;;IMMUNITY;SEP 20 2016;2016;45;3;;;;669;684;;10.1016/j.immuni.2016.08.015;;;274;54,8;0;0;0;0;0;0;3;59;72;99
Normalization of mass cytometry data with bead standards;"Finck, Rachel; Simonds, Erin F.; Jager, Astraea; Krishnaswamy, Smita; Sachs, Karen; Fantl, Wendy; Pe'er, Dana; Nolan, Garry P.; Bendall, Sean C.";;;;CYTOMETRY PART A;MAY 2013;2013;83A;5;;;;483;+;;10.1002/cyto.a.22271;;;254;31,75;0;0;0;1;10;27;23;41;44;79
Genetic and Environmental Determinants of Human NK Cell Diversity Revealed by Mass Cytometry;"Horowitz, Amir; Strauss-Albee, Dara M.; Leipold, Michael; Kubo, Jessica; Nemat-Gorgani, Neda; Dogan, Ozge C.; Dekker, Cornelia L.; Mackey, Sally; Maecker, Holden; Swan, Gary E.; Davis, Mark M.; Norman, Paul J.; Guethlein, Lisbeth A.; Desai, Manisha; Parham, Peter; Blish, Catherine A.";;;;SCIENCE TRANSLATIONAL MEDICINE;OCT 23 2013;2013;5;208;;;;;;208ra145;10.1126/scitranslmed.3006702;;;229;28,63;0;0;0;0;14;31;36;52;33;43
An Immune Atlas of Clear Cell Renal Cell Carcinoma;"Chevrier, Stephane; Levine, Jacob Harrison; Zanotelli, Vito Riccardo Tomaso; Silina, Karina; Schulz, Daniel; Bacac, Marina; Ries, Carola Hermine; Ailles, Laurie; Jewett, Michael Alexander Spencer; Moch, Holger; van den Broek, Maries; Beisel, Christian; Stadler, Michael Beda; Gedye, Craig; Reis, Bernhard; Pe'er, Dana; Bodenmiller, Bernd";;;;CELL;MAY 4 2017;2017;169;4;;;;736;749;;10.1016/j.cell.2017.04.016;;;227;56,75;0;0;0;0;0;0;0;12;64;96
Systemic Immunity Is Required for Effective Cancer Immunotherapy;"Spitzer, Matthew H.; Carmi, Yaron; Reticker-Flynn, Nathan E.; Kwek, Serena S.; Madhireddy, Deepthi; Martins, Maria M.; Gherardini, Pier Federico; Prestwood, Tyler R.; Chabon, Jonathan; Bendall, Sean C.; Fong, Lawrence; Nolan, Garry P.; Engleman, Edgar G.";;;;CELL;JAN 26 2017;2017;168;3;;;;487;+;;10.1016/j.cell.2016.12.022;;;224;56;0;0;0;0;0;0;0;24;80;76
Wishbone identifies bifurcating developmental trajectories from single-cell data;"Setty, Manu; Tadmor, Michelle D.; Reich-Zeliger, Shlomit; Ange, Omer; Salame, Tomer Meir; Kathail, Pooja; Choi, Kristy; Bendall, Sean; Friedman, Nir; Pe'er, Dana";;;;NATURE BIOTECHNOLOGY;JUN 2016;2016;34;6;;;;637;645;;10.1038/nbt.3569;;;218;43,6;0;0;0;0;0;0;8;46;72;68
Pathologically expanded peripheral T helper cell subset drives B cells in rheumatoid arthritis;"Rao, Deepak A.; Gurish, Michael F.; Marshall, Jennifer L.; Slowikowski, Kamil; Fonseka, Chamith Y.; Liu, Yanyan; Donlin, Laura T.; Henderson, Lauren A.; Wei, Kevin; Mizoguchi, Fumitaka; Teslovich, Nikola C.; Weinblatt, Michael E.; Massarotti, Elena M.; Coblyn, Jonathan S.; Helfgott, Simon M.; Lee, Yvonne C.; Todd, Derrick J.; Ykerk, Vivian P. B.; Goodman, Susan M.; Pernis, Alessandra B.; Ivashkiv, Lionel B.; Karlson, Elizabeth W.; Nigrovic, Peter A.; Filer, Andrew; Buckley, Christopher D.; Lederer, James A.; Raychaudhuri, Soumya; Renner, Michael B. B.";;;;NATURE;FEB 2 2017;2017;542;7639;;;;110;+;;10.1038/nature20810;;;214;53,5;0;0;0;0;0;0;0;22;68;87
Dimensionality reduction for visualizing single-cell data using UMAP;"Becht, Etienne; McInnes, Leland; Healy, John; Dutertre, Charles-Antoine; Kwok, Immanuel W. H.; Ng, Lai Guan; Ginhoux, Florent; Newell, Evan W.";;;;NATURE BIOTECHNOLOGY;JAN 2019;2019;37;1;;;;38;+;;10.1038/nbt.4314;;;208;104;0;0;0;0;0;0;0;0;0;102
Single-cell technologies for monitoring immune systems;"Chattopadhyay, Pratip K.; Gierahn, Todd M.; Roederer, Mario; Love, J. Christopher";;;;NATURE IMMUNOLOGY;FEB 2014;2014;15;2;;;;128;135;;10.1038/ni.2796;;;206;29,43;0;0;0;0;15;36;41;38;35;27
Cytokine-induced memory-like natural killer cells exhibit enhanced responses against myeloid leukemia;"Romee, Rizwan; Rosario, Maximillian; Berrien-Elliott, Melissa M.; Wagner, Julia A.; Jewell, Brea A.; Schappe, Timothy; Leong, Jeffrey W.; Abdel-Latif, Sara; Schneider, Stephanie E.; Willey, Sarah; Neal, Carly C.; Yu, Liyang; Oh, Stephen T.; Lee, Yi-Shan; Mulder, Arend; Claas, Frans; Cooper, Megan A.; Fehniger, Todd A.";;;;SCIENCE TRANSLATIONAL MEDICINE;SEP 21 2016;2016;8;357;;;;;;357ra123;10.1126/scitranslmed.aaf2341;;;204;40,8;0;0;0;0;0;0;3;36;53;80
Highly multiparametric analysis by mass cytometry;"Ornatsky, Olga; Bandura, Dmitry; Baranov, Vladimir; Nitz, Mark; Winnik, Mitchell A.; Tanner, Scott";;;;JOURNAL OF IMMUNOLOGICAL METHODS;SEP 30 2010;2010;361;1-2;;;;1;20;;10.1016/j.jim.2010.07.002;;;203;18,45;1;9;26;16;21;26;22;21;26;28
High-dimensional analysis of the murine myeloid cell system;"Becher, Burkhard; Schlitzer, Andreas; Chen, Jinmiao; Mair, Florian; Sumatoh, Hermi R.; Teng, Karen Wei Weng; Low, Donovan; Ruedl, Christiane; Riccardi-Castagnoli, Paola; Poidinger, Michael; Greter, Melanie; Ginhoux, Florent; Newell, Evan W.";;;;NATURE IMMUNOLOGY;DEC 2014;2014;15;12;;;;1181;1189;;10.1038/ni.3006;;;198;28,29;0;0;0;0;1;25;48;41;33;36
The Spectrum and Regulatory Landscape of Intestinal Innate Lymphoid Cells Are Shaped by the Microbiome;"Gury-BenAri, Meital; Thaiss, Christoph A.; Serafini, Nicolas; Winter, Deborah R.; Giladi, Amir; Lara-Astiaso, David; Levy, Maayan; Salame, Tomer Meir; Weiner, Assaf; David, Eyal; Shapiro, Hagit; Dori-Bachash, Mally; Pevsner-Fischer, Meirav; Lorenzo-Vivas, Erika; Keren-Shaul, Hadas; Paul, Franziska; Harmelin, Alon; Eberl, Gerard; Itzkovitz, Shalev; Tanay, Amos; Di Santo, James P.; Elinav, Eran; Amit, Ido";;;;CELL;AUG 25 2016;2016;166;5;;;;1231;+;;10.1016/j.cell.2016.07.043;;;194;38,8;0;0;0;0;0;0;4;42;53;64
PARP Inhibitor Upregulates PD-L1 Expression and Enhances Cancer-Associated Immunosuppression;"Jiao, Shiping; Xia, Weiya; Yamaguchi, Hirohito; Wei, Yongkun; Chen, Mei-Kuang; Hsu, Jung-Mao; Hsu, Jennifer L.; Yu, Wen-Hsuan; Du, Yi; Lee, Heng-Huan; Li, Chia-Wei; Chou, Chao-Kai; Lim, Seung-Oe; Chang, Shih-Shin; Litton, Jennifer; Arun, Banu; Hortobagyi, Gabriel N.; Hung, Mien-Chie";;;;CLINICAL CANCER RESEARCH;JUL 15 2017;2017;23;14;;;;3711;3720;;10.1158/1078-0432.CCR-16-3215;;;183;45,75;0;0;0;0;0;0;0;7;43;95
Revealing the vectors of cellular identity with single-cell genomics;"Wagner, Allon; Regev, Aviv; Yosef, Nir";;;;NATURE BIOTECHNOLOGY;NOV 2016;2016;34;11;;;;1145;1160;;10.1038/nbt.3711;;;181;36,2;0;0;0;0;0;0;0;32;63;70
FlowSOM: Using self-organizing maps for visualization and interpretation of cytometry data;"Van Gassen, Sofie; Callebaut, Britt; Van Helden, Mary J.; Lambrecht, Bart N.; Demeester, Piet; Dhaene, Tom; Saeys, Yvan";;;;CYTOMETRY PART A;JUL 2015;2015;87A;7;;;SI;636;645;;10.1002/cyto.a.22625;;;180;30;0;0;0;0;0;1;10;7;40;79
Mapping the human DC lineage through the integration of high-dimensional techniques;"See, Peter; Dutertre, Charles-Antoine; Chen, Jinmiao; Gunther, Patrick; McGovern, Naomi; Irac, Sergio Erdal; Gunawan, Merry; Beyer, Marc; Handler, Kristian; Duan, Kaibo; Bin Sumatoh, Hermi Rizal; Ruffin, Nicolas; Jouve, Mabel; Gea-Mallorqui, Ester; Hennekam, Raoul C. M.; Lim, Tony; Yip, Chan Chung; Wen, Ming; Malleret, Benoit; Low, Ivy; Shadan, Nurhidaya Binte; Fen, Charlene Foong Shu; Tay, Alicia; Lum, Josephine; Zolezzi, Francesca; Larbi, Anis; Poidinger, Michael; Chan, Jerry K. Y.; Chen, Qingfeng; Renia, Laurent; Haniffa, Muzlifah; Benaroch, Philippe; Schlitzer, Andreas; Schultze, Joachim L.; Newell, Evan W.; Ginhoux, Florent";;;;SCIENCE;JUN 9 2017;2017;356;6342;;;SI;;;eaag3009;10.1126/science.aag3009;;;179;44,75;0;0;0;0;0;0;0;16;56;82
High-dimensional single-cell analysis predicts response to anti-PD-1 immunotherapy;"Krieg, Carsten; Nowicka, Malgorzata; Guglietta, Silvia; Schindler, Sabrina; Hartmann, Felix J.; Weber, Lukas M.; Dummer, Reinhard; Robinson, Mark D.; Levesque, Mitchell P.; Becher, Burkhard";;;;NATURE MEDICINE;FEB 2018;2018;24;2;;;;144;+;;10.1038/nm.4466;;;178;59,33;0;0;0;0;0;0;0;0;61;83
Automated identification of stratifying signatures in cellular subpopulations;"Bruggner, Robert V.; Bodenmiller, Bernd; Dill, David L.; Tibshirani, Robert J.; Nolan, Garry P.";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;JUL 1 2014;2014;111;26;;;;E2770;E2777;;10.1073/pnas.1408792111;;;176;25,14;0;0;0;0;2;15;26;31;33;54
Human Innate Lymphoid Cell Subsets Possess Tissue-Type Based Heterogeneity in Phenotype and Frequency;"Simoni, Yannick; Fehlings, Michael; Kloverpris, Henrik N.; McGovern, Naomi; Koo, Si-Lin; Loh, Chiew Yee; Lim, Shawn; Kurioka, Ayako; Fergusson, Joannah R.; Tang, Choong-Leong; Kam, Ming Hian; Dennis, Koh; Lim, Tony Kiat Hon; Fui, Alexander Chung Yaw; Hoong, Chan Weng; Chan, Jerry Kok Yen; de Lafaille, Maria Curotto; Narayanan, Sriram; Baig, Sonia; Shabeer, Muhammad; Toh, Sue-Anne Ee Shiow; Tan, Henry Kun Kiaang; Anicete, Rosslyn; Tan, Eng-Huat; Takano, Angela; Klenerman, Paul; Leslie, Alasdair; Tan, Daniel S. W.; Tan, Iain Beehuat; Ginhoux, Florent; Newell, Evan W.";;;;IMMUNITY;JAN 17 2017;2017;46;1;;;;148;161;;10.1016/j.immuni.2016.11.005;;;164;41;0;0;0;0;0;0;0;30;41;65
Palladium-based mass tag cell barcoding with a doublet-filtering scheme and single-cell deconvolution algorithm;"Zunder, Eli R.; Finck, Rachel; Behbehani, Gregory K.; Amir, El-ad D.; Krishnaswamy, Smita; Gonzalez, Veronica D.; Lorang, Cynthia G.; Bjornson, Zach; Spitzer, Matthew H.; Bodenmiller, Bernd; Fantl, Wendy J.; Pe'er, Dana; Nolan, Garry P.";;;;NATURE PROTOCOLS;FEB 2015;2015;10;2;;;;316;333;;10.1038/nprot.2015.020;;;162;27;0;0;0;0;0;10;14;32;33;47
A human vaccine strategy based on chimpanzee adenoviral and MVA vectors that primes, boosts, and sustains functional HCV-specific T cell memory;"Swadling, Leo; Capone, Stefania; Antrobus, Richard D.; Brown, Anthony; Richardson, Rachel; Newell, Evan W.; Halliday, John; Kelly, Christabel; Bowen, Dan; Fergusson, Joannah; Kurioka, Ayako; Ammendola, Virginia; Del Sorbo, Mariarosaria; Grazioli, Fabiana; Esposito, Maria Luisa; Siani, Loredana; Traboni, Cinzia; Hill, Adrian; Colloca, Stefano; Davis, Mark; Nicosia, Alfredo; Cortese, Riccardo; Folgori, Antonella; Klenerman, Paul; Barnes, Eleanor";;;;SCIENCE TRANSLATIONAL MEDICINE;NOV 5 2014;2014;6;261;;;;;;261ra153;10.1126/scitranslmed.3009185;;;158;22,57;0;0;0;0;0;27;41;31;25;23
Clinical recovery from surgery correlates with single-cell immune signatures;"Gaudilliere, Brice; Fragiadakis, Gabriela K.; Bruggner, Robert V.; Nicolau, Monica; Finck, Rachel; Tingle, Martha; Silva, Julian; Ganio, Edward A.; Yeh, Christine G.; Maloney, William J.; Huddleston, James I.; Goodman, Stuart B.; Davis, Mark M.; Bendall, Sean C.; Fantl, Wendy J.; Angst, Martin S.; Nolan, Garry P.";;;;SCIENCE TRANSLATIONAL MEDICINE;SEP 24 2014;2014;6;255;;;;;;255ra131;10.1126/scitranslmed.3009701;;;157;22,43;0;0;0;0;0;25;26;35;34;28
Single-Cell Multiomics: Multiple Measurements from Single Cells;"Macaulay, Iain C.; Ponting, Chris P.; Voet, Thierry";;;;TRENDS IN GENETICS;FEB 2017;2017;33;2;;;;155;168;;10.1016/j.tig.2016.12.003;;;150;37,5;0;0;0;0;0;0;0;16;47;65
Combinatorial tetramer staining and mass cytometry analysis facilitate T-cell epitope mapping and characterization;"Newell, Evan W.; Sigal, Natalia; Nair, Nitya; Kidd, Brian A.; Greenberg, Harry B.; Davis, Mark M.";;;;NATURE BIOTECHNOLOGY;JUL 2013;2013;31;7;;;;623;U81;;10.1038/nbt.2593;;;141;17,63;0;0;0;4;15;26;14;18;23;30
Human immune system variation;"Brodin, Petter; Davis, Mark M.";;;;NATURE REVIEWS IMMUNOLOGY;JAN 2017;2017;17;1;;;;21;29;;10.1038/nri.2016.125;;;139;34,75;0;0;0;0;0;0;0;21;44;47
A gut bacterial pathway metabolizes aromatic amino acids into nine circulating metabolites;"Dodd, Dylan; Spitzer, Matthew H.; Van Treuren, William; Merrill, Bryan D.; Hryckowian, Andrew J.; Higginbottom, Steven K.; Le, Anthony; Cowan, Tina M.; Nolan, Garry P.; Fischbach, Michael A.; Sonnenburg, Justin L.";;;;NATURE;NOV 30 2017;2017;551;7682;;;;648;+;;10.1038/nature24661;;;135;33,75;0;0;0;0;0;0;0;0;31;72
The transcriptional landscape of alpha beta T cell differentiation;"Mingueneau, Michael; Kreslavsky, Taras; Gray, Daniel; Heng, Tracy; Cruse, Richard; Ericson, Jeffrey; Bendall, Sean; Spitzer, Matt; Nolan, Garry; Kobayashi, Koichi; von Boehmer, Harald; Mathis, Diane; Benoist, Christophe; Best, Adam J.; Knell, Jamie; Goldrath, Ananda; Jojic, Vladimir; Koller, Daphne; Shay, Tal; Regev, Aviv; Cohen, Nadia; Brennan, Patrick; Brenner, Michael; Kim, Francis; Rao, Tata Nageswara; Wagers, Amy; Heng, Tracy; Ericson, Jeffrey; Rothamel, Katherine; Ortiz-Lopez, Adriana; Mathis, Diane; Bezman, Natalie A.; Sun, Joseph C.; Min-Oo, Gundula; Kim, Charlie C.; Lanier, Lewis L.; Miller, Jennifer; Brown, Brian; Merad, Miriam; Gautier, Emmanuel L.; Jakubzick, Claudia; Randolph, Gwendalyn J.; Monach, Paul; Blair, David A.; Dustin, Michael L.; Shinton, Susan A.; Hardy, Richard R.; Laidlaw, David; Collins, Jim; Gazit, Roi; Rossi, Derrick J.; Malhotra, Nidhi; Sylvia, Katelyn; Kang, Joonsoo; Kreslavsky, Taras; Fletcher, Anne; Elpek, Kutlu; Bellemare-Pelletier, Angelique; Malhotra, Deepali; Turley, Shannon";Immunological Genome Consortium;;;NATURE IMMUNOLOGY;JUN 2013;2013;14;6;;;;619;+;;10.1038/ni.2590;;;134;16,75;0;0;0;4;20;24;25;16;16;19
Automatic Classification of Cellular Expression by Nonlinear Stochastic Embedding (ACCENSE);"Shekhar, Karthik; Brodin, Petter; Davis, Mark M.; Chakraborty, Arup K.";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;JAN 7 2014;2014;111;1;;;;202;207;;10.1073/pnas.1321405111;;;130;18,57;0;0;0;0;3;15;25;35;18;28
Highly multiplexed simultaneous detection of RNAs and proteins in single cells;"Frei, Andreas P.; Bava, Felice-Alessio; Zunder, Eli R.; Hsieh, Elena W. Y.; Chen, Shih-Yu; Nolan, Garry P.; Gherardini, Pier Federico";;;;NATURE METHODS;MAR 2016;2016;13;3;;;;269;+;;10.1038/NMETH.3742;;;129;25,8;0;0;0;0;0;0;14;30;37;36
High-Dimensional Single-Cell Mapping of Central Nervous System Immune Cells Reveals Distinct Myeloid Subsets in Health, Aging, and Disease;"Mrdjen, Dunja; Pavlovic, Anto; Hartmann, Felix J.; Schreiner, Bettina; Utz, Sebastian G.; Leung, Brian P.; Lelios, Iva; Heppner, Frank L.; Kipnis, Jonathan; Merkler, Doron; Greter, Melanie; Becher, Burkhard";;;;IMMUNITY;FEB 20 2018;2018;48;2;;;;380;+;;10.1016/j.immuni.2018.01.011;;;128;42,67;0;0;0;0;0;0;0;0;27;66
Heterogeneity of Human CD4+T Cells Against Microbes;Sallusto, Federica;;;"Littman, DR; Yokoyama, WM";ANNUAL REVIEW OF IMMUNOLOGY, VOL 34;2016;2016;34;;;;;317;334;;10.1146/annurev-immunol-032414-112056;;;117;23,4;0;0;0;0;0;0;5;28;33;35
Mass spectrometry imaging and profiling of single cells;"Lanni, Eric J.; Rubakhin, Stanislav S.; Sweedler, Jonathan V.";;;;JOURNAL OF PROTEOMICS;AUG 30 2012;2012;75;16;;;SI;5036;5051;;10.1016/j.jprot.2012.03.017;;;117;13;0;0;2;9;22;20;17;19;12;14
An interactive reference framework for modeling a dynamic immune system;"Spitzer, Matthew H.; Gherardini, Pier Federico; Fragiadakis, Gabriela K.; Bhattacharya, Nupur; Yuan, Robert T.; Hotson, Andrew N.; Finck, Rachel; Carmi, Yaron; Zunder, Eli R.; Fantl, Wendy J.; Bendall, Sean C.; Engleman, Edgar G.; Nolan, Garry P.";;;;SCIENCE;JUL 10 2015;2015;349;6244;;;;;;1259425;10.1126/science.1259425;;;115;19,17;0;0;0;0;0;0;21;29;32;21
destiny: diffusion maps for large-scale single cell data in R;"Angerer, Philipp; Haghverdi, Laleh; Buettner, Maren; Theis, Fabian J.; Marr, Carsten; Buettner, Florian";;;;BIOINFORMATICS;APR 15 2016;2016;32;8;;;;1241;1243;;10.1093/bioinformatics/btv715;;;114;22,8;0;0;0;0;0;0;6;18;33;34
Highly multiplexed imaging of single cells using a high-throughput cyclic immunofluorescence method;"Lin, Jia-Ren; Fallahi-Sichani, Mohammad; Sorger, Peter K.";;;;NATURE COMMUNICATIONS;SEP 2015;2015;6;;;;;;;8390;10.1038/ncomms9390;;;114;19;0;0;0;0;0;0;11;21;27;38
Single-cell mass cytometry adapted to measurements of the cell cycle;"Behbehani, Gregory K.; Bendall, Sean C.; Clutter, Matthew R.; Fantl, Wendy J.; Nolan, Garry P.";;;;CYTOMETRY PART A;JUL 2012;2012;81A;7;;;;552;566;;10.1002/cyto.a.22075;;;114;12,67;0;0;3;10;12;14;10;17;17;18
CD161 Defines a Transcriptional and Functional Phenotype across Distinct Human T Cell Lineages;"Fergusson, Joannah R.; Smith, Kira E.; Fleming, Vicki M.; Rajoriya, Neil; Newell, Evan W.; Simmons, Ruth; Marchi, Emanuele; Bjorkander, Sophia; Kang, Yu-Hoi; Swadling, Leo; Kurioka, Ayako; Sahgal, Natasha; Lockstone, Helen; Baban, Dilair; Freeman, Gordon J.; Sverremark-Ekstrom, Eva; Davis, Mark M.; Davenport, Miles P.; Venturi, Vanessa; Ussher, James E.; Willberg, Christian B.; Klenerman, Paul";;;;CELL REPORTS;NOV 6 2014;2014;9;3;;;;1075;1088;;10.1016/j.celrep.2014.09.045;;;113;16,14;0;0;0;0;0;12;23;15;24;27
A platinum-based covalent viability reagent for single-cell mass cytometry;"Fienberg, Harris G.; Simonds, Erin F.; Fantl, Wendy J.; Nolan, Garry P.; Bodenmiller, Bernd";;;;CYTOMETRY PART A;JUN 2012;2012;81A;6;;;;467;475;;10.1002/cyto.a.22067;;;108;12;0;0;3;4;6;16;11;27;17;18
Single-cell mass cytometry for analysis of immune system functional states;"Bjornson, Zach B.; Nolan, Garry P.; Fantl, Wendy J.";;;;CURRENT OPINION IN IMMUNOLOGY;AUG 2013;2013;25;4;;;;484;494;;10.1016/j.coi.2013.07.004;;;103;12,88;0;0;0;0;13;14;19;19;20;16
Single-cell protein analysis;"Wu, Meiye; Singh, Anup K.";;;;CURRENT OPINION IN BIOTECHNOLOGY;FEB 2012;2012;23;1;;;;83;88;;10.1016/j.copbio.2011.11.023;;;102;11,33;0;0;6;13;14;10;11;12;16;13
Comparison of Clustering Methods for High-Dimensional Single-Cell Flow and Mass Cytometry Data;"Weber, Lukas M.; Robinson, Mark D.";;;;CYTOMETRY PART A;DEC 2016;2016;89A;12;;;;1084;1096;;10.1002/cyto.a.23030;;;100;20;0;0;0;0;0;0;0;7;27;52
A Continuous Molecular Roadmap to iPSC Reprogramming through Progression Analysis of Single-Cell Mass Cytometry;"Zunder, Eli R.; Lujan, Ernesto; Goltsev, Yury; Wernig, Marius; Nolan, Garry P.";;;;CELL STEM CELL;MAR 5 2015;2015;16;3;;;;323;337;;10.1016/j.stem.2015.01.015;;;95;15,83;0;0;0;0;0;7;21;18;19;25
Large-scale detection of antigen-specific T cells using peptide-MHC-I multimers labeled with DNA barcodes;"Bentzen, Amalie Kai; Marquard, Andrea Marion; Lyngaa, Rikke; Saini, Sunil Kumar; Ramskov, Sofie; Donia, Marco; Such, Lina; Furness, Andrew J. S.; McGranahan, Nicholas; Rosenthal, Rachel; Straten, Per Thor; Szallasi, Zoltan; Svane, Inge Marie; Swanton, Charles; Quezada, Sergio A.; Jakobsen, Soren Nyboe; Eklund, Aron Charles; Hadrup, Sine Reker";;;;NATURE BIOTECHNOLOGY;OCT 2016;2016;34;10;;;;1037;1045;;10.1038/nbt.3662;;;93;18,6;0;0;0;0;0;0;0;27;18;34
A High-Dimensional Atlas of Human T Cell Diversity Reveals Tissue-Specific Trafficking and Cytokine Signatures;"Wong, Michael Thomas; Ong, David Eng Hui; Lim, Frances Sheau Huei; Teng, Karen Wei Weng; McGovern, Naomi; Narayanan, Sriram; Ho, Wen Qi; Cerny, Daniela; Tan, Henry Kun Kiaang; Anicete, Rosslyn; Tan, Bien Keem; Lim, Tony Kiat Hon; Chan, Chung Yip; Cheow, Peng Chung; Lee, Ser Yee; Takano, Angela; Tan, Eng-Huat; Tam, John Kit Chung; Tan, Ern Yu; Chan, Jerry Kok Yen; Fink, Katja; Bertoletti, Antonio; Ginhoux, Florent; De Lafaille, Maria Alicia Curotto; Newell, Evan William";;;;IMMUNITY;AUG 16 2016;2016;45;2;;;;442;456;;10.1016/j.immuni.2016.07.007;;;93;18,6;0;0;0;0;0;0;2;19;31;28
Conditional density-based analysis of T cell signaling in single-cell data;"Krishnaswamy, Smita; Spitzer, Matthew H.; Mingueneau, Michael; Bendall, Sean C.; Litvin, Oren; Stone, Erica; Pe'er, Dana; Nolan, Garry P.";;;;SCIENCE;NOV 28 2014;2014;346;6213;;;;1079;+;1250689;10.1126/science.1250689;;;93;13,29;0;0;0;0;0;6;21;21;17;17
The end of gating? An introduction to automated analysis of high dimensional cytometry data;"Mair, Florian; Hartmann, Felix J.; Mrdjen, Dunja; Tosevski, Vinko; Krieg, Carsten; Becher, Burkhard";;;;EUROPEAN JOURNAL OF IMMUNOLOGY;JAN 2016;2016;46;1;;;;34;43;;10.1002/eji.201545774;;;91;18,2;0;0;0;0;0;0;16;14;20;33
Unifying immunology with informatics and multiscale biology;"Kidd, Brian A.; Peters, Lauren A.; Schadt, Eric E.; Dudley, Joel T.";;;;NATURE IMMUNOLOGY;FEB 2014;2014;15;2;;;;118;127;;10.1038/ni.2787;;;91;13;0;0;0;0;16;21;18;12;12;10
Cell-of-Origin-Specific 3D Genome Structure Acquired during Somatic Cell Reprogramming;"Krijger, Peter Hugo Lodewijk; Di Stefano, Bruno; de Wit, Elzo; Limone, Francesco; van Oevelen, Chris; de Laat, Wouter; Graf, Thomas";;;;CELL STEM CELL;MAY 5 2016;2016;18;5;;;;597;610;;10.1016/j.stem.2016.01.007;;;87;17,4;0;0;0;0;0;0;9;21;24;26
Automated mapping of phenotype space with single-cell data;"Samusik, Nikolay; Good, Zinaida; Spitzer, Matthew H.; Davis, Kara L.; Nolan, Garry P.";;;;NATURE METHODS;JUN 2016;2016;13;6;;;;493;+;;10.1038/NMETH.3863;;;85;17;0;0;0;0;0;0;0;13;23;39
Crowdsourcing Network Inference: The DREAM Predictive Signaling Network Challenge;"Prill, Robert J.; Saez-Rodriguez, Julio; Alexopoulos, Leonidas G.; Sorger, Peter K.; Stolovitzky, Gustavo";;;;SCIENCE SIGNALING;SEP 6 2011;2011;4;189;;;;;;mr7;10.1126/scisignal.2002212;;;85;8,5;0;0;9;15;9;15;13;10;6;4
Stereotypic Immune System Development in Newborn Children;"Olin, Axel; Henckel, Ewa; Chen, Yang; Lakshmikanth, Tadepally; Pou, Christian; Mikes, Jaromir; Gustafsson, Anna; Bernhardsson, Anna Karin; Zhang, Cheng; Bohlin, Kajsa; Brodin, Petter";;;;CELL;AUG 23 2018;2018;174;5;;;;1277;+;;10.1016/j.cell.2018.06.045;;;84;28;0;0;0;0;0;0;0;0;4;47
Cytofkit: A Bioconductor Package for an Integrated Mass Cytometry Data Analysis Pipeline;"Chen, Hao; Lau, Mai Chan; Wong, Michael Thomas; Newell, Evan W.; Poidinger, Michael; Chen, Jinmiao";;;;PLOS COMPUTATIONAL BIOLOGY;SEP 2016;2016;12;9;;;;;;e1005112;10.1371/journal.pcbi.1005112;;;78;15,6;0;0;0;0;0;0;2;7;23;31
Beyond model antigens: high-dimensional methods for the analysis of antigen-specific T cells;"Newell, Evan W.; Davis, Mark M.";;;;NATURE BIOTECHNOLOGY;FEB 2014;2014;32;2;;;;149;157;;10.1038/nbt.2783;;;78;11,14;0;0;0;0;8;15;20;10;18;6
Human NK cell repertoire diversity reflects immune experience and correlates with viral susceptibility;"Strauss-Albee, Dara M.; Fukuyama, Julia; Liang, Emily C.; Yao, Yi; Jarrell, Justin A.; Drake, Alison L.; Kinuthia, John; Montgomery, Ruth R.; John-Stewart, Grace; Holmes, Susan; Blish, Catherine A.";;;;SCIENCE TRANSLATIONAL MEDICINE;JUL 22 2015;2015;7;297;;;;;;297ra115;10.1126/scitranslmed.aac5722;;;77;12,83;0;0;0;0;0;1;13;23;17;19
Single-Cell Analysis in Cancer Genomics;"Saadatpour, Assieh; Lai, Shujing; Guo, Guoji; Yuan, Guo-Cheng";;;;TRENDS IN GENETICS;OCT 2015;2015;31;10;;;SI;576;586;;10.1016/j.tig.2015.07.003;;;74;12,33;0;0;0;0;0;0;11;19;25;17
Methods for discovery and characterization of cell subsets in high dimensional mass cytometry data;"Diggins, Kirsten E.; Ferrell, P. Brent, Jr.; Irish, Jonathan M.";;;;METHODS;JUL 1 2015;2015;82;;;;;55;63;;10.1016/j.ymeth.2015.05.008;;;72;12;0;0;0;0;0;2;16;22;8;20
Chikungunya Viral Arthritis in the United States A Mimic of Seronegative Rheumatoid Arthritis;"Miner, Jonathan J.; Yeang, Han Xian Aw; Fox, Julie M.; Taffner, Samantha; Malkova, Olga N.; Oh, Stephen T.; Kim, Alfred H. J.; Diamond, Michael S.; Lenschow, Deborah J.; Yokoyama, Wayne M.";;;;ARTHRITIS & RHEUMATOLOGY;MAY 2015;2015;67;5;;;;1214;1220;;10.1002/art.39027;;;72;12;0;0;0;0;0;3;12;16;21;13
High-dimensional, single-cell characterization of the brain's immune compartment;"Korin, Ben; Ben-Shaanan, Tamar L.; Schiller, Maya; Dubovik, Tania; Azulay-Debby, Hilla; Boshnak, Nadia T.; Koren, Tamar; Rolls, Asya";;;;NATURE NEUROSCIENCE;SEP 2017;2017;20;9;;;;1300;+;;10.1038/nn.4610;;;71;17,75;0;0;0;0;0;0;0;0;27;27
An immune clock of human pregnancy;"Aghaeepour, Nima; Ganio, Edward A.; Mcilwain, David; Tsai, Amy S.; Tingle, Martha; Van Gassen, Sofie; Gaudilliere, Dyani K.; Baca, Quentin; McNeil, Leslie; Okada, Robin; Ghaemi, Mohammad S.; Furman, David; Wong, Ronald J.; Winn, Virginia D.; Druzin, Maurice L.; El-Sayed, Yaser Y.; Quaintance, Cecele; Gibbs, Ronald; Darmstadt, Gary L.; Shaw, Gary M.; Stevenson, David K.; Tibshirani, Robert; Nolan, Garry P.; Lewis, David B.; Angst, Martin S.; Gaudilliere, Brice";;;;SCIENCE IMMUNOLOGY;SEP 2017;2017;2;15;;;;;;eaan2946;10.1126/sciimmunol.aan2946;;;70;17,5;0;0;0;0;0;0;0;2;11;39
PD-1 marks dysfunctional regulatory T cells in malignant gliomas;"Lowther, Daniel E.; Goods, Brittany A.; Lucca, Liliana E.; Lerner, Benjamin A.; Raddassi, Khadir; van Dijk, David; Hernandez, Amanda L.; Duan, Xiangguo; Gunel, Murat; Coric, Vlad; Krishnaswamy, Smita; Love, J. Christopher; Hafler, David A.";;;;JCI INSIGHT;APR 21 2016;2016;1;5;;;;;;e85935;10.1172/jci.insight.85935;;;70;14;0;0;0;0;0;0;1;14;27;21
Mapping the Diversity of Follicular Helper T Cells in Human Blood and Tonsils Using High-Dimensional Mass Cytometry Analysis;"Wong, Michael T.; Chen, Jinmiao; Narayanan, Sriram; Lin, Wenyu; Anicete, Rosslyn; Kiaang, Henry Tan Kun; De lafaille, Maria Alicia Curotto; Poidinger, Michael; Newell, Evan W.";;;;CELL REPORTS;JUN 23 2015;2015;11;11;;;;1822;1833;;10.1016/j.celrep.2015.05.022;;;70;11,67;0;0;0;0;0;0;11;13;21;14
Synthesis of a Functional Metal-Chelating Polymer and Steps toward Quantitative Mass Cytometry Bioassays;"Majonis, Daniel; Herrera, Isaac; Ornatsky, Olga; Schulze, Maren; Lou, Xudong; Soleimani, Mohsen; Nitz, Mark; Winnik, Mitchell A.";;;;ANALYTICAL CHEMISTRY;NOV 1 2010;2010;82;21;;;;8961;8969;;10.1021/ac101901x;;;69;6,27;0;1;10;6;8;6;4;11;10;10
Barcoding of Live Human Peripheral Blood Mononuclear Cells for Multiplexed Mass Cytometry;"Mei, Henrik E.; Leipold, Michael D.; Schulz, Axel Ronald; Chester, Cariad; Maecker, Holden T.";;;;JOURNAL OF IMMUNOLOGY;FEB 15 2015;2015;194;4;;;;2022;2031;;10.4049/jimmunol.1402661;;;68;11,33;0;0;0;0;0;4;8;7;13;31
OpenCyto: An Open Source Infrastructure for Scalable, Robust, Reproducible, and Automated, End-to-End Flow Cytometry Data Analysis;"Finak, Greg; Frelinger, Jacob; Jiang, Wenxin; Newell, Evan W.; Ramey, John; Davis, Mark M.; Kalams, Spyros A.; De Rosa, Stephen C.; Gottardo, Raphael";;;;PLOS COMPUTATIONAL BIOLOGY;AUG 2014;2014;10;8;;;;;;e1003806;10.1371/journal.pcbi.1003806;;;68;9,71;0;0;0;0;0;7;14;10;13;19
Abseq: Ultrahigh-throughput single cell protein profiling with droplet microfluidic barcoding;"Shahi, Payam; Kim, Samuel C.; Haliburton, John R.; Gartner, Zev J.; Abate, Adam R.";;;;SCIENTIFIC REPORTS;MAR 14 2017;2017;7;;;;;;;44447;10.1038/srep44447;;;65;16,25;0;0;0;0;0;0;0;5;18;25
Developmental Analysis of Bone Marrow Neutrophils Reveals Populations Specialized in Expansion, Trafficking, and Effector Functions;"Evrard, Maximilien; Kwok, Immanuel W. H.; Chong, Shu Zhen; Teng, Karen W. W.; Becht, Etienne; Chen, Jinmiao; Sieow, Je Lin; Penny, Hweixian Leong; Ching, Goh Chi; Devi, Sapna; Adrover, Jose Maria; Li, Jackson L. Y.; Liong, Ka Hang; Tan, Leonard; Poon, Zhiyong; Foo, Shihui; Chua, Jia Wang; Su, I-Hsin; Balabanian, Karl; Bachelerie, Francois; Biswas, Subhra K.; Larbi, Anis; Hwang, William Y. K.; Madan, Vikas; Koeffler, H. Phillip; Wong, Siew Cheng; Newell, Evan W.; Hidalgo, Andres; Ginhoux, Florent; Ng, Lai Guan";;;;IMMUNITY;FEB 20 2018;2018;48;2;;;;364;+;;10.1016/j.immuni.2018.02.002;;;64;21,33;0;0;0;0;0;0;0;0;7;37
Atlas of the Immune Cell Repertoire in Mouse Atherosclerosis Defined by Single-Cell RNA-Sequencing and Mass Cytometry;"Winkels, Holger; Ehinger, Erik; Vassallo, Melanie; Buscher, Konrad; Dinh, Huy Q.; Kobiyama, Kouji; Hamers, Anouk A. J.; Cochain, Clement; Vafadarnejad, Ehsan; Saliba, Antoine-Emmanuel; Zernecke, Alma; Pramod, Akula Bala; Ghosh, Amlan K.; Michel, Nathaly Anto; Hoppe, Natalie; Hilgendorf, Ingo; Zirlik, Andreas; Hedrick, Catherine C.; Ley, Klaus; Wolf, Dennis";;;;CIRCULATION RESEARCH;JUN 8 2018;2018;122;12;;;;1675;1688;;10.1161/CIRCRESAHA.117.312513;;;63;21;0;0;0;0;0;0;0;0;6;36
Single-cell mass cytometry reveals distinct populations of brain myeloid cells in mouse neuroinflammation and neurodegeneration models;"Ajami, Bahareh; Samusik, Nikolay; Wieghofer, Peter; Ho, Peggy P.; Crotti, Andrea; Bjornson, Zach; Prinz, Marco; Fantl, Wendy J.; Nolan, Garry P.; Steinman, Lawrence";;;;NATURE NEUROSCIENCE;APR 2018;2018;21;4;;;;541;+;;10.1038/s41593-018-0100-x;;;63;21;0;0;0;0;0;0;0;0;14;29
histoCAT: analysis of cell phenotypes and interactions in multiplex image cytometry data;"Schapiro, Denis; Jackson, Hartland W.; Raghuraman, Swetha; Fischer, Jana R.; Zanotelli, Vito R. T.; Schulz, Daniel; Giesen, Charlotte; Catena, Raul; Varga, Zsuzsanna; Bodenmiller, Bernd";;;;NATURE METHODS;SEP 2017;2017;14;9;;;;873;+;;10.1038/NMETH.4391;;;63;15,75;0;0;0;0;0;0;0;1;11;30
Class I HLA haplotypes form two schools that educate NK cells in different ways;"Horowitz, Amir; Djaoud, Zakia; Nemat-Gorgani, Neda; Blokhuis, Jeroen; Hilton, Hugo G.; Beziat, Vivien; Malmberg, Karl-Johan; Norman, Paul J.; Guethlein, Lisbeth A.; Parham, Peter";;;;SCIENCE IMMUNOLOGY;SEP 2016;2016;1;3;;;;;;eaag1672;10.1126/sciimmunol.aag1672;;;63;12,6;0;0;0;0;0;0;0;14;15;27
Molecular Obstacles to Clinical Translation of iPSCs;"Tapia, Natalia; Schoeler, Hans R.";;;;CELL STEM CELL;SEP 1 2016;2016;19;3;;;;298;309;;10.1016/j.stem.2016.06.017;;;62;12,4;0;0;0;0;0;0;3;22;11;21
Inductively coupled plasma mass spectrometry-based immunoassay: A review;"Liu, Rui; Wu, Peng; Yang, Lu; Hou, Xiandeng; Lv, Yi";;;;MASS SPECTROMETRY REVIEWS;SEP-OCT 2014;2014;33;5;;;;373;393;;10.1002/mas.21391;;;62;8,86;0;0;0;0;6;9;13;10;11;9
Single-Cell Mass Cytometry Analysis of the Human Endocrine Pancreas;"Wang, Yue J.; Golson, Maria L.; Schug, Jonathan; Traum, Daniel; Liu, Chengyang; Vivek, Kumar; Dorrell, Craig; Naji, Ali; Powers, Alvin C.; Chang, Kyong-Mi; Grompe, Markus; Kaestner, Klaus H.";;;;CELL METABOLISM;OCT 11 2016;2016;24;4;;;;616;626;;10.1016/j.cmet.2016.09.007;;;61;12,2;0;0;0;0;0;0;0;19;17;23
An introduction to mass cytometry: fundamentals and applications;"Tanner, Scott D.; Baranov, Vladimir I.; Ornatsky, Olga I.; Bandura, Dmitry R.; George, Thaddeus C.";;;;CANCER IMMUNOLOGY IMMUNOTHERAPY;MAY 2013;2013;62;5;;;;955;965;;10.1007/s00262-013-1416-8;;;61;7,63;0;0;0;3;8;9;6;13;9;11
New tools for classification and monitoring of autoimmune diseases;"Maecker, Holden T.; Lindstrom, Tamsin M.; Robinson, William H.; Utz, Paul J.; Hale, Matthew; Boyd, Scott D.; Shen-Orr, Shai S.; Fathman, C. Garrison";;;;NATURE REVIEWS RHEUMATOLOGY;JUN 2012;2012;8;6;;;;317;328;;10.1038/nrrheum.2012.66;;;60;6,67;0;0;2;11;10;7;7;9;11;2
Novel BET protein proteolysis-targeting chimera exerts superior lethal activity than bromodomain inhibitor (BETi) against post-myeloproliferative neoplasm secondary (s) AML cells;"Saenz, D. T.; Fiskus, W.; Qian, Y.; Manshouri, T.; Rajapakshe, K.; Raina, K.; Coleman, K. G.; Crew, A. P.; Shen, A.; Mill, C. P.; Sun, B.; Qiu, P.; Kadia, T. M.; Pemmaraju, N.; DiNardo, C.; Kim, M-S; Nowak, A. J.; Coarfa, C.; Crews, C. M.; Verstovsek, S.; Bhalla, K. N.";;;;LEUKEMIA;SEP 2017;2017;31;9;;;;1951;1961;;10.1038/leu.2016.393;;;59;14,75;0;0;0;0;0;0;0;3;20;29
Early reprogramming regulators identified by prospective isolation and mass cytometry;"Lujan, Ernesto; Zunder, Eli R.; Ng, Yi Han; Goronzy, Isabel N.; Nolan, Garry P.; Wernig, Marius";;;;NATURE;MAY 21 2015;2015;521;7552;;;;352;+;;10.1038/nature14274;;;59;9,83;0;0;0;0;0;2;19;13;12;9
CyTOF supports efficient detection of immune cell subsets from small samples;"Yao, Yi; Liu, Rebecca; Shin, Min Sun; Trentalange, Mark; Allore, Heather; Nassar, Ala; Kang, Insoo; Pober, Jordan S.; Montgomery, Ruth R.";;;;JOURNAL OF IMMUNOLOGICAL METHODS;DEC 15 2014;2014;415;;;;;1;5;;10.1016/j.jim.2014.10.010;;;59;8,43;0;0;0;0;0;7;10;13;12;12
Single-Cell Chromatin Modification Profiling Reveals Increased Epigenetic Variations with Aging;"Cheung, Peggie; Vallania, Francesco; Warsinske, Hayley C.; Donato, Michele; Schaffert, Steven; Chang, Sarah E.; Dvorak, Mai; Dekker, Cornelia L.; Davis, Mark M.; Utz, Paul J.; Khatri, Purvesh; Kuo, Alex J.";;;;CELL;MAY 31 2018;2018;173;6;;;;1385;+;;10.1016/j.cell.2018.03.079;;;58;19,33;0;0;0;0;0;0;0;0;15;29
Combined targeting of BCL-2 and BCR-ABL tyrosine kinase eradicates chronic myeloid leukemia stem cells;"Carter, Bing Z.; Mak, Po Yee; Mu, Hong; Zhou, Hongsheng; Mak, Duncan H.; Schober, Wendy; Leverson, Joel D.; Zhang, Bin; Bhatia, Ravi; Huang, Xuelin; Cortes, Jorge; Kantarjian, Hagop; Konopleva, Marina; Andreeff, Michael";;;;SCIENCE TRANSLATIONAL MEDICINE;SEP 7 2016;2016;8;355;;;;;;355ra117;10.1126/scitranslmed.aag1180;;;57;11,4;0;0;0;0;0;0;1;17;11;16
Single cell-resolution western blotting;"Kang, Chi-Chih; Yamauchi, Kevin A.; Vlassakis, Julea; Sinkala, Elly; Duncombe, Todd A.; Herr, Amy E.";;;;NATURE PROTOCOLS;AUG 2016;2016;11;8;;;;1508;1530;;10.1038/nprot.2016.089;;;57;11,4;0;0;0;0;0;0;1;14;18;12
Phenotypic Complexity of the Human Regulatory T Cell Compartment Revealed by Mass Cytometry;"Mason, Gavin M.; Lowe, Katie; Melchiotti, Rossella; Ellis, Richard; de Rinaldis, Emanuele; Peakman, Mark; Heck, Susanne; Lombardi, Giovanna; Tree, Timothy I. M.";;;;JOURNAL OF IMMUNOLOGY;SEP 1 2015;2015;195;5;;;;2030;2037;;10.4049/jimmunol.1500703;;;57;9,5;0;0;0;0;0;0;11;11;14;15
Cytometry by time-of-flight immunophenotyping identifies a blood Sjogren's signature correlating with disease activity and glandular inflammation;"Mingueneau, Michael; Boudaoud, Saida; Haskett, Scott; Reynolds, Taylor L.; Nocturne, Gaetane; Norton, Elizabeth; Zhang, Xueli; Constant, Myrtha; Park, Daniel; Wang, Wenting; Lazure, Thierry; Le Pajolec, Christine; Ergun, Ayla; Mariette, Xavier";;;;JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY;JUN 2016;2016;137;6;;;;1809;+;;10.1016/j.jaci.2016.01.024;;;56;11,2;0;0;0;0;0;0;4;18;10;17
Combination of Mass Cytometry and Imaging Analysis Reveals Origin, Location, and Functional Repopulation of Liver Myeloid Cells in Mice;"David, Bruna Araujo; Rezende, Rafael Machado; Antunes, Maisa Mota; Santos, Monica Morais; Freitas Lopes, Maria Alice; Diniz, Ariane Barros; Sousa Pereira, Rafaela Vaz; Marchesi, Sarah Cozzer; Alvarenga, Debora Moreira; Nakagaki, Brenda Naemi; Araujo, Alan Moreira; dos Reis, Daniela Silva; Rocha, Renata Monti; Marques, Pedro Elias; Lee, Woo-Yong; Deniset, Justin; Liew, Pei Xiong; Rubino, Stephen; Cox, Laura; Pinho, Vanessa; Cunha, Thiago Mattar; Fernandes, Gabriel Rocha; Oliveira, Andre Gustavo; Teixeira, Mauro Martins; Kubes, Paul; Menezes, Gustavo Batista";;;;GASTROENTEROLOGY;DEC 2016;2016;151;6;;;;1176;1191;;10.1053/j.gastro.2016.08.024;;;55;11;0;0;0;0;0;0;2;13;17;17
Defining inflammatory cell states in rheumatoid arthritis joint synovial tissues by integrating single-cell transcriptomics and mass cytometry;"Zhang, Fan; Wei, Kevin; Slowikowski, Kamil; Fonseka, Chamith Y.; Rao, Deepak A.; Kelly, Stephen; Goodman, Susan M.; Tabechian, Darren; Hughes, Laura B.; Salomon-Escoto, Karen; Watts, Gerald F. M.; Jonsson, A. Helena; Rangel-Moreno, Javier; Meednu, Nida; Rozo, Cristina; Apruzzese, William; Eisenhaure, Thomas M.; Lieb, David J.; Boyle, David L.; Mandelin, Arthur M., II; Boyce, Brendan F.; DiCarlo, Edward; Gravallese, Ellen M.; Gregersen, Peter K.; Moreland, Larry; Firestein, Gary S.; Hacohen, Nir; Nusbaum, Chad; Lederer, James A.; Perlman, Harris; Pitzalis, Costantino; Filer, Andrew; Holers, V. Michael; Bykerk, Vivian P.; Donlin, Laura T.; Anolik, Jennifer H.; Brenner, Michael B.; Raychaudhuri, Soumya; Albrecht, Jennifer; Bridges, S. Louis, Jr.; Buckley, Christopher D.; Buckner, Jane H.; Dolan, James; Guthridge, Joel M.; Gutierrez-Arcelus, Maria; Ivashkiv, Lionel B.; James, Eddie A.; James, Judith A.; Keegan, Josh; Lee, Yvonne C.; McGeachy, Mandy J.; McNamara, Michael A.; Mears, Joseph R.; Mizoguchi, Fumitaka; Nguyen, Jennifer P.; Noma, Akiko; Orange, Dana E.; Rohani-Pichavant, Mina; Ritchlin, Christopher; Robinson, William H.; Seshadri, Anupamaa; Sutherby, Danielle; Seifert, Jennifer; Turner, Jason D.; Utz, Paul J.";Accelerating Medicines Partnersh;;;NATURE IMMUNOLOGY;JUL 2019;2019;20;7;;;;928;+;;10.1038/s41590-019-0378-1;;;54;27;0;0;0;0;0;0;0;0;0;23
Mass Cytometry of the Human Mucosal Immune System Identifies Tissue- and Disease-Associated Immune Subsets;"van Unen, Vincent; Li, Na; Molendijk, Ilse; Temurhan, Mine; Hollt, Thomas; van der Meulen-de Jong, Andrea E.; Verspaget, Hein W.; Mearin, M. Luisa; Mulder, Chris J.; van Bergen, Jeroen; Lelieveldt, Boudewijn P. F.; Koning, Frits";;;;IMMUNITY;MAY 17 2016;2016;44;5;;;;1227;1239;;10.1016/j.immuni.2016.04.014;;;54;10,8;0;0;0;0;0;0;3;11;12;23
Transient Partial Permeabilization with Saponin Enables Cellular Barcoding Prior to Surface Marker Staining;"Behbehani, Gregory K.; Thom, Colin; Zunder, Eli R.; Finck, Rachel; Gaudilliere, Brice; Fragiadakis, Gabriela K.; Fantl, Wendy J.; Nolan, Garry P.";;;;CYTOMETRY PART A;DEC 2014;2014;85A;12;;;;1011;1019;;10.1002/cyto.a.22573;;;54;7,71;0;0;0;0;0;7;5;18;9;11
New approaches to understanding the immune response to vaccination and infection;"Furman, David; Davis, Mark M.";;;;VACCINE;SEP 29 2015;2015;33;40;;;SI;5271;5281;;10.1016/j.vaccine.2015.06.117;;;53;8,83;0;0;0;0;0;1;6;5;10;18
Epigenomic-Guided Mass Cytometry Profiling Reveals Disease-Specific Features of Exhausted CD8 T Cells;"Bengsch, Bertram; Ohtani, Takuya; Khan, Omar; Setty, Manu; Manne, Sasikanth; O'Brien, Shaun; Gherardini, Pier Federico; Herati, Ramin Sedaghat; Huang, Alexander C.; Chang, Kyong-Mi; Newell, Evan W.; Bovenschen, Niels; Pe'er, Dana; Albelda, Steven M.; Wherry, E. John";;;;IMMUNITY;MAY 15 2018;2018;48;5;;;;1029;+;;10.1016/j.immuni.2018.04.026;;;52;17,33;0;0;0;0;0;0;0;0;6;31
Hepatitis B virus-specific T cells associate with viral control upon nucleos(t)ide-analogue therapy discontinuation;"Rivino, Laura; Le Bert, Nina; Gill, Upkar S.; Kunasegaran, Kamini; Cheng, Yang; Tan, Damien Z. M.; Becht, Etienne; Hansi, Navjyot K.; Foster, Graham R.; Su, Tung-Hung; Tseng, Tai-Chung; Lim, Seng Gee; Kao, Jia-Horng; Newell, Evan W.; Kennedy, Patrick T. F.; Bertoletti, Antonio";;;;JOURNAL OF CLINICAL INVESTIGATION;FEB 1 2018;2018;128;2;;;;668;681;;10.1172/JCI92812;;;52;17,33;0;0;0;0;0;0;0;0;13;24
Intratumoral heterogeneity: pathways to treatment resistance and relapse in human glioblastoma;"Qazi, M. A.; Vora, P.; Venugopal, C.; Sidhu, S. S.; Moffat, J.; Swanton, C.; Singh, S. K.";;;;ANNALS OF ONCOLOGY;JUL 2017;2017;28;7;;;;1448;1456;;10.1093/annonc/mdx169;;;52;13;0;0;0;0;0;0;0;1;12;30
Advancing biomedical imaging;"Weissleder, Ralph; Nahrendorf, Matthias";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;NOV 24 2015;2015;112;47;;;;14424;14428;;10.1073/pnas.1508524112;;;52;8,67;0;0;0;0;0;0;7;21;14;4
Different subsets of natural killer T cells may vary in their roles in health and disease;"Kumar, Vipin; Delovitch, Terry L.";;;;IMMUNOLOGY;JUL 2014;2014;142;3;;;;321;336;;10.1111/imm.12247;;;52;7,43;0;0;0;0;3;8;11;5;12;11
Tumour heterogeneity and metastasis at single-cell resolution;"Lawson, Devon A.; Kessenbrock, Kai; Davis, Ryan T.; Pervolarakis, Nicholas; Werb, Zena";;;;NATURE CELL BIOLOGY;DEC 2018;2018;20;12;;;;1349;1360;;10.1038/s41556-018-0236-7;;;51;17;0;0;0;0;0;0;0;0;0;26
Delineation of an immunosuppressive gradient in hepatocellular carcinoma using high-dimensional proteomic and transcriptomic analyses;"Chew, Valerie; Lai, Liyun; Pan, Lu; Lim, Chun Jye; Li, Juntao; Ong, Raymond; Chua, Camillus; Leong, Jing Yao; Lim, Kiat Hon; Toh, Han Chong; Lee, Ser Yee; Chan, Chung Yip; Goh, Brian K. P.; Chung, Alexander; Chow, Pierce K. H.; Albani, Salvatore";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;JUL 18 2017;2017;114;29;;;;E5900;E5909;;10.1073/pnas.1706559114;;;51;12,75;0;0;0;0;0;0;0;0;11;28
Systems immunology: just getting started;"Davis, Mark M.; Tato, Cristina M.; Furman, David";;;;NATURE IMMUNOLOGY;JUL 2017;2017;18;7;;;;725;732;;10.1038/ni.3768;;;51;12,75;0;0;0;0;0;0;0;2;14;26
Visualization and cellular hierarchy inference of single-cell data using SPADE;"Anchang, Benedict; Hart, Tom D. P.; Bendall, Sean C.; Qiu, Peng; Bjornson, Zach; Linderman, Michael; Nolan, Garry P.; Plevritis, Sylvia K.";;;;NATURE PROTOCOLS;JUL 2016;2016;11;7;;;;1264;1279;;10.1038/nprot.2016.066;;;51;10,2;0;0;0;0;0;0;1;13;16;14
Algorithmic Tools for Mining High-Dimensional Cytometry Data;"Chester, Cariad; Maecker, Holden T.";;;;JOURNAL OF IMMUNOLOGY;AUG 1 2015;2015;195;3;;;;773;779;;10.4049/jimmunol.1500633;;;51;8,5;0;0;0;0;0;1;6;10;11;17
Single-cell and multivariate approaches in genetic perturbation screens;"Liberali, Prisca; Snijder, Berend; Pelkmans, Lucas";;;;NATURE REVIEWS GENETICS;JAN 2015;2015;16;1;;;;18;32;;10.1038/nrg3768;;;51;8,5;0;0;0;0;0;9;10;13;9;6
Early immunologic correlates of HIV protection can be identified from computational analysis of complex multivariate T-cell flow cytometry assays(*);"Aghaeepour, Nima; Chattopadhyay, Pratip K.; Ganesan, Anuradha; O'Neill, Kieran; Zare, Habil; Jalali, Adrin; Hoos, Holger H.; Roederer, Mario; Brinkman, Ryan R.";;;;BIOINFORMATICS;APR 1 2012;2012;28;7;;;;1009;1016;;10.1093/bioinformatics/bts082;;;51;5,67;0;0;4;7;16;2;7;4;4;5
Human microglia regional heterogeneity and phenotypes determined by multiplexed single-cell mass cytometry;"Boettcher, Chotima; Schlickeiser, Stephan; Sneeboer, Marjolein A. M.; Kunkel, Desiree; Knop, Anniki; Paza, Evdokia; Fidzinski, Pawel; Kraus, Larissa; Snijders, Gijsje J. L.; Kahn, Rene S.; Schulz, Axel R.; Mei, Henrik E.; Hol, Elly M.; Siegmund, Britta; Glauben, Rainer; Spruth, Eike J.; de Witte, Lot D.; Priller, Josef";NBB-Psy;;;NATURE NEUROSCIENCE;JAN 2019;2019;22;1;;;;78;+;;10.1038/s41593-018-0290-2;;;50;25;0;0;0;0;0;0;0;0;0;27
Activation of the reward system boosts innate and adaptive immunity;"Ben-Shaanan, Tamar L.; Azulay-Debby, Hilla; Dubovik, Tania; Starosvetsky, Elina; Korin, Ben; Schiller, Maya; Green, Nathaniel L.; Admon, Yasmin; Hakim, Fahed; Shen-Orr, Shai S.; Rolls, Asya";;;;NATURE MEDICINE;AUG 2016;2016;22;8;;;;940;+;;10.1038/nm.4133;;;50;10;0;0;0;0;0;0;2;17;13;8
Mass cytometry: blessed with the curse of dimensionality;"Newell, Evan W.; Cheng, Yang";;;;NATURE IMMUNOLOGY;AUG 2016;2016;17;8;;;;890;895;;10.1038/ni.3485;;;50;10;0;0;0;0;0;0;2;13;16;17
Mass Cytometric Functional Profiling of Acute Myeloid Leukemia Defines Cell-Cycle and Immunophenotypic Properties That Correlate with Known Responses to Therapy;"Behbehani, Gregory K.; Samusik, Nikolay; Bjornson, Zach B.; Fantl, Wendy J.; Medeiros, Bruno C.; Nolan, Garry P.";;;;CANCER DISCOVERY;SEP 2015;2015;5;9;;;;988;1003;;10.1158/2159-8290.CD-15-0298;;;50;8,33;0;0;0;0;0;1;9;12;12;11
Single-Cell Mass Cytometry Reveals Intracellular Survival/Proliferative Signaling in FLT3-ITD-Mutated AML Stem/Progenitor Cells;"Han, Lina; Qiu, Peng; Zeng, Zhihong; Jorgensen, Jeffrey L.; Mak, Duncan H.; Burks, Jared K.; Schober, Wendy; McQueen, Teresa J.; Cortes, Jorge; Tanner, Scott D.; Roboz, Gail J.; Kantarjian, Hagop M.; Kornblau, Steven M.; Guzman, Monica L.; Andreeff, Michael; Konopleva, Marina";;;;CYTOMETRY PART A;APR 2015;2015;87A;4;;;;346;+;;10.1002/cyto.a.22628;;;50;8,33;0;0;0;0;0;3;8;17;9;9
Single-Cell Mass Cytometry Analysis of Human Tonsil T Cell Remodeling by Varicella Zoster Virus;"Sen, Nandini; Mukherjee, Gourab; Sen, Adrish; Bendall, Sean C.; Sung, Phillip; Nolan, Garry P.; Arvin, Ann M.";;;;CELL REPORTS;JUL 24 2014;2014;8;2;;;;633;645;;10.1016/j.celrep.2014.06.024;;;50;7,14;0;0;0;0;0;9;11;10;13;6
Anti-CTLA-4 Immunotherapy Does Not Deplete FOXP3(+) Regulatory T Cells (Tregs) in Human Cancers;"Sharma, Anu; Subudhi, Sumit K.; Blando, Jorge; Scutti, Jorge; Vence, Luis; Wargo, Jennifer; Allison, James P.; Ribas, Antoni; Sharma, Padmanee";;;;CLINICAL CANCER RESEARCH;FEB 15 2019;2019;25;4;;;;1233;1238;;10.1158/1078-0432.CCR-18-0762;;;49;24,5;0;0;0;0;0;0;0;0;3;26
Paradoxical changes in innate immunity in aging: recent progress and new directions;"Montgomery, Ruth R.; Shaw, Albert C.";;;;JOURNAL OF LEUKOCYTE BIOLOGY;DEC 2015;2015;98;6;;;;937;943;;10.1189/jlb.5MR0315-104R;;;49;8,17;0;0;0;0;0;0;6;11;18;11
Human Blood Monocyte Subsets A New Gating Strategy Defined Using Cell Surface Markers Identified by Mass Cytometry;"Thomas, Graham D.; Hamers, Anouk A. J.; Nakao, Catherine; Marcovecchio, Paola; Taylor, Angela M.; McSkimming, Chantel; Anh Tram Nguyen; McNamara, Coleen A.; Hedrick, Catherine C.";;;;ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY;AUG 2017;2017;37;8;;;;1548;+;;10.1161/ATVBAHA.117.309145;;;47;11,75;0;0;0;0;0;0;0;3;15;21
Unraveling cell populations in tumors by single-cell mass cytometry;"Di Palma, Serena; Bodenmiller, Bernd";;;;CURRENT OPINION IN BIOTECHNOLOGY;FEB 2015;2015;31;;;;;122;129;;10.1016/j.copbio.2014.07.004;;;47;7,83;0;0;0;0;0;1;15;11;11;7
A multi-cohort study of the immune factors associated with M. tuberculosis infection outcomes;"Chowdhury, Roshni Roy; Vallania, Francesco; Yang, Qiantian; Angel, Cesar Joel Lopez; Darboe, Fatoumatta; Penn-Nicholson, Adam; Rozot, Virginie; Nemes, Elisa; Malherbe, Stephanus T.; Ronacher, Katharina; Walzl, Gerhard; Hanekom, Willem; Davis, Mark M.; Winter, Jill; Chen, Xinchun; Scriba, Thomas J.; Khatri, Purvesh; Chien, Yueh-hsiu";;;;NATURE;AUG 30 2018;2018;560;7720;;;;644;+;;10.1038/s41586-018-0439-x;;;46;15,33;0;0;0;0;0;0;0;0;3;29
High-throughput quantitation of inorganic nanoparticle biodistribution at the single-cell level using mass cytometry;"Yang, Yu-Sang Sabrina; Atukorale, Prabhani U.; Moynihan, Kelly D.; Bekdemir, Ahmet; Rakhra, Kavya; Tang, Li; Stellacci, Francesco; Irvine, Darrell J.";;;;NATURE COMMUNICATIONS;JAN 17 2017;2017;8;;;;;;;14069;10.1038/ncomms14069;;;46;11,5;0;0;0;0;0;0;0;9;10;20
Novel Resolvin D2 Receptor Axis in Infectious Inflammation;"Chiang, Nan; de la Rosa, Xavier; Libreros, Stephania; Serhan, Charles N.";;;;JOURNAL OF IMMUNOLOGY;JAN 15 2017;2017;198;2;;;;842;851;;10.4049/jimmunol.1601650;;;46;11,5;0;0;0;0;0;0;0;10;13;17
Low-dose IL-2 selectively activates subsets of CD4(+) Tregs and NK cells;"Hirakawa, Masahiro; Matos, Tiago; Liu, Hongye; Koreth, John; Kim, Haesook T.; Paul, Nicole E.; Murase, Kazuyuki; Whangbo, Jennifer; Alho, Ana C.; Nikiforow, Sarah; Cutler, Corey; Ho, Vincent T.; Armand, Philippe; Alyea, Edwin P.; Antin, Joseph H.; Blazar, Bruce R.; Lacerda, Joao F.; Soiffer, Robert J.; Ritz, Jerome";;;;JCI INSIGHT;NOV 3 2016;2016;1;18;;;;;;e89278;10.1172/jci.insight.89278;;;46;9,2;0;0;0;0;0;0;0;10;13;20
Deep phenotyping of Tregs identifies an immune signature for idiopathic aplastic anemia and predicts response to treatment;"Kordasti, Shahram; Costantini, Benedetta; Seidl, Thomas; Abellan, Pilar Perez; Llordella, Marc Martinez; McLornan, Donal; Diggins, Kirsten E.; Kulasekararaj, Austin; Benfatto, Cinzia; Feng, Xingmin; Smith, Alexander; Mian, Syed A.; Melchiotti, Rossella; de Rinaldis, Emanuele; Ellis, Richard; Petrov, Nedyalko; Povoleri, Giovanni A. M.; Chung, Sun Sook; Thomas, N. Shaun B.; Farzaneh, Farzin; Irish, Jonathan M.; Heck, Susanne; Young, Neal S.; Marsh, Judith C. W.; Mufti, Ghulam J.";;;;BLOOD;SEP 1 2016;2016;128;9;;;;1193;1205;;10.1182/blood-2016-03-703702;;;46;9,2;0;0;0;0;0;0;2;8;16;10
A Single-Cell Atlas of the Tumor and Immune Ecosystem of Human Breast Cancer;"Wagner, Johanna; Rapsomaniki, Maria Anna; Chevrier, Stephane; Anzeneder, Tobias; Langwieder, Claus; Dykgers, August; Rees, Martin; Ramaswamy, Annette; Muenst, Simone; Soysa, Savas Deniz; Jacobs, Andrea; Windhager, Jonas; Silina, Karina; van den Broek, Manes; Dedes, Konstantin Johannes; Martinez, Maria Rodriguez; Weber, Walter Paul; Bodenmiller, Bernd";;;;CELL;MAY 16 2019;2019;177;5;;;;1330;+;;10.1016/j.cell.2019.03.005;;;45;22,5;0;0;0;0;0;0;0;0;0;14
Unifying mechanism for different fibrotic diseases;"Wernig, Gerlinde; Chen, Shih-Yu; Cui, Lu; Van Neste, Camille; Tsai, Jonathan M.; Kambham, Neeraja; Vogel, Hannes; Natkunam, Yaso; Gilliland, D. Gary; Nolan, Garry; Weissman, Irving L.";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;MAY 2 2017;2017;114;18;;;;4757;4762;;10.1073/pnas.1621375114;;;45;11,25;0;0;0;0;0;0;0;4;9;24
Visual analysis of mass cytometry data by hierarchical stochastic neighbour embedding reveals rare cell types;"van Unen, Vincent; Hollt, Thomas; Pezzotti, Nicola; Li, Na; Reinders, Marcel J. T.; Eisemann, Elmar; Koning, Frits; Vilanova, Anna; Lelieveldt, Boudewijn P. F.";;;;NATURE COMMUNICATIONS;NOV 23 2017;2017;8;;;;;;;1740;10.1038/s41467-017-01689-9;;;44;11;0;0;0;0;0;0;0;0;9;26
Flow Cytometry Bioinformatics;"O'Neill, Kieran; Aghaeepour, Nima; Spidlen, Josef; Brinkman, Ryan";;;;PLOS COMPUTATIONAL BIOLOGY;DEC 2013;2013;9;12;;;;;;e1003365;10.1371/journal.pcbi.1003365;;;44;5,5;0;0;0;0;5;9;6;7;6;8
Myeloid cell heterogeneity in cancer: not a single cell alike;"Kiss, Mate; Van Gassen, Sofie; Movahedi, Kiavash; Saeys, Yvan; Laoui, Damya";;;;CELLULAR IMMUNOLOGY;AUG 2018;2018;330;;;;SI;188;201;;10.1016/j.cellimm.2018.02.008;;;43;14,33;0;0;0;0;0;0;0;0;10;26
Distinct predictive biomarker candidates for response to anti-CTLA-4 and anti-PD-1 immunotherapy in melanoma patients;"Subrahmanyam, Priyanka B.; Dong, Zhiwan; Gusenleitner, Daniel; Giobbie-Hurder, Anita; Severgnini, Mariano; Zhou, Jun; Manos, Michael; Eastman, Lauren M.; Maecker, Holden T.; Hodi, F. Stephen";;;;JOURNAL FOR IMMUNOTHERAPY OF CANCER;MAR 6 2018;2018;6;;;;;;;18;10.1186/s40425-018-0328-8;;;43;14,33;0;0;0;0;0;0;0;0;10;22
Simultaneous Multiplexed Imaging of mRNA and Proteins with Subcellular Resolution in Breast Cancer Tissue Samples by Mass Cytometry;"Schulz, Daniel; Zanotelli, Vito Riccardo Tomaso; Fischer, Jana Raja; Schapiro, Denis; Engler, Stefanie; Lun, Xiao-Kang; Jackson, Hartland Warren; Bodenmiller, Bernd";;;;CELL SYSTEMS;JAN 24 2018;2018;6;1;;;;25;+;;10.1016/j.cels.2017.12.001;;;43;14,33;0;0;0;0;0;0;0;0;8;25
Humanized mouse model supports development, function, and tissue residency of human natural killer cells;"Herndler-Brandstetter, Dietmar; Shan, Liang; Yao, Yi; Stecher, Carmen; Plajer, Valerie; Lietzenmayer, Melanie; Strowig, Till; de Zoete, Marcel R.; Palm, Noah W.; Chen, Jie; Blish, Catherine A.; Frleta, Davor; Gurer, Cagan; Macdonald, Lynn E.; Murphy, Andrew J.; Yancopoulos, George D.; Montgomery, Ruth R.; Flavell, Richard A.";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;NOV 7 2017;2017;114;45;;;;E9626;E9634;;10.1073/pnas.1705301114;;;43;10,75;0;0;0;0;0;0;0;1;12;17
Single cell analysis of human tissues and solid tumors with mass cytometry;"Leelatian, Nalin; Doxie, Deon B.; Greenplate, Allison R.; Mobley, Bret C.; Lehman, Jonathan M.; Sinnaeve, Justine; Kauffmann, Rondi M.; Werkhaven, Jay A.; Mistry, Akshitkumar M.; Weaver, Kyle D.; Thompson, Reid C.; Massion, Pierre P.; Hooks, Mary A.; Kelley, Mark C.; Chambless, Lola B.; Ihrie, Rebecca A.; Irish, Jonathan M.";;;;CYTOMETRY PART B-CLINICAL CYTOMETRY;JAN 2017;2017;92;1;;;SI;68;78;;10.1002/cyto.b.21481;;;43;10,75;0;0;0;0;0;0;0;10;12;16
Computational methods for trajectory inference from single-cell transcriptomics;"Cannoodt, Robrecht; Saelens, Wouter; Saeys, Yvan";;;;EUROPEAN JOURNAL OF IMMUNOLOGY;NOV 2016;2016;46;11;;;;2496;2506;;10.1002/eji.201646347;;;43;8,6;0;0;0;0;0;0;0;0;13;15
Detection, phenotyping, and quantification of antigen-specific T cells using a peptide-MHC dodecamer;"Huang, Jun; Zeng, Xun; Sigal, Natalia; Lund, Peder J.; Su, Laura F.; Huang, Huang; Chien, Yueh-hsiu; Davis, Mark M.";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;MAR 29 2016;2016;113;13;;;;E1890;E1897;;10.1073/pnas.1602488113;;;43;8,6;0;0;0;0;0;0;6;9;12;11
A Quantitative Analysis of Complexity of Human Pathogen-Specific CD4 T Cell Responses in Healthy M. tuberculosis Infected South Africans;"Arlehamn, Cecilia S. Lindestam; McKinney, Denise M.; Carpenter, Chelsea; Paul, Sinu; Rozot, Virginie; Makgotlho, Edward; Gregg, Yolande; van Rooyen, Michele; Ernst, Joel D.; Hatherill, Mark; Hanekom, Willem A.; Peters, Bjoern; Scriba, Thomas J.; Sette, Alessandro";;;;PLOS PATHOGENS;JUL 2016;2016;12;7;;;;;;e1005760;10.1371/journal.ppat.1005760;;;42;8,4;0;0;0;0;0;0;0;14;15;9
In Vivo Autofluorescence Imaging of Tumor Heterogeneity in Response to Treatment;"Shah, Amy T.; Diggins, Kirsten E.; Walsh, Alex J.; Irish, Jonathan M.; Skala, Melissa C.";;;;NEOPLASIA;DEC 2015;2015;17;12;;;;862;870;;10.1016/j.neo.2015.11.006;;;42;7;0;0;0;0;0;0;4;12;10;16
Evaluating the Efficiency of Isotope Transmission for Improved Panel Design and a Comparison of the Detection Sensitivities of Mass Cytometer Instruments;"Tricot, Sabine; Meyrand, Mickael; Sammicheli, Chiara; Elhmouzi-Younes, Jamila; Corneau, Aurelien; Bertholet, Sylvie; Malissen, Marie; Le Grand, Roger; Nuti, Sandra; Luche, Herve; Cosma, Antonio";;;;CYTOMETRY PART A;APR 2015;2015;87A;4;;;;357;368;;10.1002/cyto.a.22648;;;42;7;0;0;0;0;0;4;8;7;9;11
Coordinated Regulation of NK Receptor Expression in the Maturing Human Immune System;"Strauss-Albee, Dara M.; Horowitz, Amir; Parham, Peter; Blish, Catherine A.";;;;JOURNAL OF IMMUNOLOGY;NOV 15 2014;2014;193;10;;;;4871;4879;;10.4049/jimmunol.1401821;;;42;6;0;0;0;0;0;5;10;12;7;4
Single-cell systems-level analysis of human Toll-like receptor activation defines a chemokine signature in patients with systemic lupus erythematosus;"O'Gorman, William E.; Hsieh, Elena W. Y.; Savig, Erica S.; Gherardini, Pier Federico; Hernandez, Joseph D.; Hansmann, Leo; Balboni, Imelda M.; Utz, Paul J.; Bendall, Sean C.; Fantl, Wendy J.; Lewis, David B.; Nolan, Garry P.; Davis, Mark M.";;;;JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY;NOV 2015;2015;136;5;;;;1326;1336;;10.1016/j.jaci.2015.04.008;;;41;6,83;0;0;0;0;0;0;8;11;7;13
RchyOptimyx: Cellular hierarchy optimization for flow cytometry;"Aghaeepour, Nima; Jalali, Adrin; O'Neill, Kieran; Chattopadhyay, Pratip K.; Roederer, Mario; Hoos, Holger H.; Brinkman, Ryan R.";;;;CYTOMETRY PART A;DEC 2012;2012;81A;12;;;;1022;1030;;10.1002/cyto.a.22209;;;40;4,44;0;0;0;6;10;4;7;4;3;5
High-Dimensional Analysis Delineates Myeloid and Lymphoid Compartment Remodeling during Successful Immune-Checkpoint Cancer Therapy;"Gubin, Matthew M.; Esaulova, Ekaterina; Ward, Jeffrey P.; Malkova, Olga N.; Runci, Daniele; Wong, Pamela; Noguchi, Takuro; Arthur, Cora D.; Meng, Wei; Alspach, Elise; Medrano, Ruan F. V.; Fronick, Catrina; Fehlings, Michael; Newell, Evan W.; Fulton, Robert S.; Sheehan, Kathleen C. F.; Oh, Stephen T.; Schreiber, Robert D.; Artyomov, Maxim N.";;;;CELL;NOV 1 2018;2018;175;4;;;;1014;+;;10.1016/j.cell.2018.09.030;;;39;13;0;0;0;0;0;0;0;0;1;20
Compensation of Signal Spillover in Suspension and Imaging Mass Cytometry;"Chevrier, Stephane; Crowell, Helena L.; Zanotelli, Vito R. T.; Engler, Stefanie; Robinson, Mark D.; Bodenmiller, Bernd";;;;CELL SYSTEMS;MAY 23 2018;2018;6;5;;;;612;+;;10.1016/j.cels.2018.02.010;;;39;13;0;0;0;0;0;0;0;0;3;27
Intratumoral HPV16-Specific T Cells Constitute a Type I-Oriented Tumor Microenvironment to Improve Survival in HPV16-Driven Oropharyngeal Cancer;"Welters, Marij J. P.; Ma, Wenbo; Santegoets, Saskia J. A. M.; Goedemans, Renske; Ehsan, Ilina; Jordanova, Ekaterina S.; van Ham, Vanessa J.; van Unen, Vincent; Koning, Frits; van Egmond, Sylvia I.; Charoentong, Pornpimol; Trajanoski, Zlatko; van der Velden, Lilly-Ann; van der Burg, Sjoerd H.";;;;CLINICAL CANCER RESEARCH;FEB 1 2018;2018;24;3;;;;634;647;;10.1158/1078-0432.CCR-17-2140;;;38;12,67;0;0;0;0;0;0;0;0;10;22
Cytobank: Providing an Analytics Platform for Community Cytometry Data Analysis and Collaboration;"Chen, Tiffany J.; Kotecha, Nikesh";;;"Fienberg, HG; Nolan, GP";HIGH-DIMENSIONAL SINGLE CELL ANALYSIS: MASS CYTOMETRY, MULTI-PARAMETRIC FLOW CYTOMETRY AND BIOINFORMATIC TECHNIQUES;2014;2014;377;;;;;127;157;;10.1007/82_2014_364;;;38;5,43;0;0;0;0;2;3;3;6;8;13
Immune cell profiling to guide therapeutic decisions in rheumatic diseases;"Ermann, Joerg; Rao, Deepak A.; Teslovich, Nikola C.; Brenner, Michael B.; Raychaudhuri, Soumya";;;;NATURE REVIEWS RHEUMATOLOGY;SEP 2015;2015;11;9;;;;541;551;;10.1038/nrrheum.2015.71;;;37;6,17;0;0;0;0;0;0;7;4;8;16
Unsupervised Trajectory Analysis of Single-Cell RNA-Seq and Imaging Data Reveals Alternative Tuft Cell Origins in the Gut;"Herring, Charles A.; Banerjee, Amrita; McKinley, Eliot T.; Simmons, Alan J.; Ping, Jie; Roland, Joseph T.; Franklin, Jeffrey L.; Liu, Qi; Gerdes, Michael J.; Coffey, Robert J.; Lau, Ken S.";;;;CELL SYSTEMS;JAN 24 2018;2018;6;1;;;;37;+;;10.1016/j.cels.2017.10.012;;;36;12;0;0;0;0;0;0;0;0;11;19
Cutting Edge: Human CD49e(-) NK Cells Are Tissue Resident in the Liver;"Yeang, Han Xian Aw; Piersma, Sytse J.; Lin, Yiing; Yang, Liping; Malkova, Olga N.; Miner, Cathrine; Krupnick, Alexander S.; Chapman, William C.; Yokoyama, Wayne M.";;;;JOURNAL OF IMMUNOLOGY;FEB 15 2017;2017;198;4;;;;1417;1422;;10.4049/jimmunol.1601818;;;36;9;0;0;0;0;0;0;0;8;7;15
Single-cell technologies are revolutionizing the approach to rare cells;"Proserpio, Valentina; Loennberg, Tapio";;;;IMMUNOLOGY AND CELL BIOLOGY;MAR 2016;2016;94;3;;;;225;229;;10.1038/icb.2015.106;;;36;7,2;0;0;0;0;0;0;5;8;10;8
Human CD4(+) lymphocytes for antigen quantification: Characterization using conventional flow cytometry and mass cytometry;"Wang, Lili; Abbasi, Fatima; Ornatsky, Olga; Cole, Kenneth D.; Misakian, Martin; Gaigalas, Adolfas K.; He, Hua-Jun; Marti, Gerald E.; Tanner, Scott; Stebbings, Richard";;;;CYTOMETRY PART A;JUL 2012;2012;81A;7;;;;567;575;;10.1002/cyto.a.22060;;;36;4;0;0;1;3;8;7;5;4;3;3
STING-associated vasculopathy develops independently of IRF3 in mice;"Warner, James D.; Irizarry-Caro, Ricardo A.; Bennion, Brock G.; Ai, Teresa L.; Smith, Amber M.; Miner, Cathrine A.; Sakai, Tomomi; Gonugunta, Vijay K.; Wu, Jianjun; Platt, Derek J.; Yan, Nan; Miner, Jonathan J.";;;;JOURNAL OF EXPERIMENTAL MEDICINE;NOV 2017;2017;214;11;;;;3279;3292;;10.1084/jem.20171351;;;35;8,75;0;0;0;0;0;0;0;0;8;21
Single cell proteomics in biomedicine: High-dimensional data acquisition, visualization, and analysis;"Su, Yapeng; Shi, Qihui; Wei, Wei";;;;PROTEOMICS;FEB 2017;2017;17;3-4;;;SI;;;1600267;10.1002/pmic.201600267;;;35;8,75;0;0;0;0;0;0;0;3;16;13
High-dimensional single-cell analysis reveals the immune signature of narcolepsy;"Hartmann, Felix J.; Bernard-Valnet, Raphael; Queriault, Clemence; Mrdjen, Dunja; Weber, Lukas M.; Galli, Edoardo; Krieg, Carsten; Robinson, Mark D.; Xuan-Hung Nguyen; Dauvilliers, Yves; Liblau, Roland S.; Becher, Burkhard";;;;JOURNAL OF EXPERIMENTAL MEDICINE;NOV 2016;2016;213;12;;;;2621;2633;;10.1084/jem.20160897;;;35;7;0;0;0;0;0;0;2;2;10;17
Categorical Analysis of Human T Cell Heterogeneity with One-Dimensional Soli-Expression by Nonlinear Stochastic Embedding;"Cheng, Yang; Wong, Michael T.; van der Maaten, Laurens; Newell, Evan W.";;;;JOURNAL OF IMMUNOLOGY;JAN 15 2016;2016;196;2;;;;924;932;;10.4049/jimmunol.1501928;;;35;7;0;0;0;0;0;0;6;11;8;7
A CD45-Based Barcoding Approach to Multiplex Mass-Cytometry (CyTOF);"Lai, Liyun; Ong, Raymond; Li, Juntao; Albani, Salvatore";;;;CYTOMETRY PART A;APR 2015;2015;87A;4;;;;369;374;;10.1002/cyto.a.22640;;;35;5,83;0;0;0;0;0;1;5;9;7;13
Systems biology in drug discovery and development;Berg, Ellen L.;;;;DRUG DISCOVERY TODAY;FEB 2014;2014;19;2;;;;113;125;;10.1016/j.drudis.2013.10.003;;;35;5;0;0;0;0;4;10;6;4;4;4
Global absolute quantification reveals tight regulation of protein expression in single Xenopus eggs;"Smits, Arne H.; Lindeboom, Rik G. H.; Perino, Matteo; van Heeringen, Simon J.; Veenstra, Gert Jan C.; Vermeulen, Michiel";;;;NUCLEIC ACIDS RESEARCH;2014;2014;42;15;;;;9880;9891;;10.1093/nar/gku661;;;35;5;0;0;0;0;0;5;10;9;4;5
Metal-isotope-tagged monoclonal antibodies for high-dimensional mass cytometry;"Han, Guojun; Spitzer, Matthew H.; Bendall, Sean C.; Fantl, Wendy J.; Nolan, Garry P.";;;;NATURE PROTOCOLS;OCT 2018;2018;13;10;;;;2121;2148;;10.1038/s41596-018-0016-7;;;34;11,33;0;0;0;0;0;0;0;0;0;23
Checkpoint blockade immunotherapy reshapes the high-dimensional phenotypic heterogeneity of murine intratumoural neoantigen-specific CD8(+) T cells;"Fehlings, M.; Simoni, Y.; Penny, H. L.; Becht, E.; Loh, C. Y.; Gubin, M. M.; Ward, J. P.; Wong, S. C.; Schreiber, R. D.; Newell, E. W.";;;;NATURE COMMUNICATIONS;SEP 15 2017;2017;8;;;;;;;562;10.1038/s41467-017-00627-z;;;34;8,5;0;0;0;0;0;0;0;0;8;22
Platinum-conjugated Antibodies for Application in Mass Cytometry;"Mei, Henrik E.; Leipold, Michael D.; Maecker, Holden T.";;;;CYTOMETRY PART A;MAR 2016;2016;89A;3;;;;292;300;;10.1002/cyto.a.22778;;;34;6,8;0;0;0;0;0;0;0;11;7;12
Multiparameter Phenotyping of Human PBMCs Using Mass Cytometry;"Leipold, Michael D.; Newell, Evan W.; Maecker, Holden T.";;;Shaw, AC;IMMUNOSENESCENCE: METHODS AND PROTOCOLS;2015;2015;1343;;;;;81;95;;10.1007/978-1-4939-2963-4_7;;;34;5,67;0;0;0;0;0;0;5;8;6;13
Characterizing heterogeneity in leukemic cells using single-cell gene expression analysis;"Saadatpour, Assieh; Guo, Guoji; Orkin, Stuart H.; Yuan, Guo-Cheng";;;;GENOME BIOLOGY;2014;2014;15;12;;;;;;525;10.1186/s13059-014-0525-9;;;34;4,86;0;0;0;0;0;5;8;10;4;4
Distinct Immune Cell Populations Define Response to Anti-PD-1 Monotherapy and Anti-PD-1/Anti-CTLA-4 Combined Therapy;"Gide, Tuba N.; Quek, Camelia; Menzies, Alexander M.; Tasker, Annie T.; Shang, Ping; Holst, Jeff; Madore, Jason; Lim, Su Yin; Velickovic, Rebecca; Wongchenko, Matthew; Yan, Yibing; Lo, Serigne; Carlino, Matteo S.; Guminski, Alexander; Saw, Robyn P. M.; Pang, Angel; McGuire, Helen M.; Palendira, Umaimainthan; Thompson, John F.; Rizos, Helen; da Silva, Ines Pires; Batten, Marcel; Scolyer, Richard A.; Long, Georgina V.; Wilmott, James S.";;;;CANCER CELL;FEB 11 2019;2019;35;2;;;;238;+;;10.1016/j.ccell.2019.01.003;;;33;16,5;0;0;0;0;0;0;0;0;0;13
Mass cytometry of Hodgkin lymphoma reveals a CD4(+) regulatory T-cell-rich and exhausted T-effector microenvironment;"Cader, Fathima Zumla; Schackmann, Ron C. J.; Hu, Xihao; Wienand, Kirsty; Redd, Robert; Chapuy, Bjoern; Ouyang, Jing; Paul, Nicole; Gjini, Evisa; Lipschitz, Mikel; Armand, Philippe; Wu, David; Fromm, Jonathan R.; Neuberg, Donna; Liu, X. Shirley; Rodig, Scott J.; Shipp, Margaret A.";;;;BLOOD;AUG 23 2018;2018;132;8;;;;825;836;;10.1182/blood-2018-04-843714;;;33;11;0;0;0;0;0;0;0;0;3;17
Combined inhibition of beta-catenin and Bcr-Abl synergistically targets tyrosine kinase inhibitor-resistant blast crisis chronic myeloid leukemia blasts and progenitors in vitro and in vivo;"Zhou, H.; Mak, P. Y.; Mu, H.; Mak, D. H.; Zeng, Z.; Cortes, J.; Liu, Q.; Andreeff, M.; Carter, B. Z.";;;;LEUKEMIA;OCT 2017;2017;31;10;;;;2065;2074;;10.1038/leu.2017.87;;;33;8,25;0;0;0;0;0;0;0;3;10;15
High-resolution myogenic lineage mapping by single-cell mass cytometry;"Porpiglia, Ermelinda; Samusik, Nikolay; Van Ho, Andrew Tri; Cosgrove, Benjamin D.; Mai, Thach; Davis, Kara L.; Jager, Astraea; Nolan, Garry P.; Bendall, Sean C.; Fantl, Wendy J.; Blau, Helen M.";;;;NATURE CELL BIOLOGY;MAY 2017;2017;19;5;;;;558;+;;10.1038/ncb3507;;;33;8,25;0;0;0;0;0;0;0;2;11;11
Single-cell profiling approaches to probing tumor heterogeneity;"Khoo, Bee Luan; Chaudhuri, Parthiv Kant; Ramalingam, Naveen; Tan, Daniel Shao Weng; Lim, Chwee Teck; Warkiani, Majid Ebrahimi";;;;INTERNATIONAL JOURNAL OF CANCER;JUL 15 2016;2016;139;2;;;;243;255;;10.1002/ijc.30006;;;33;6,6;0;0;0;0;0;0;2;10;8;10
Expansion of inflammatory innate lymphoid cells in patients with common variable immune deficiency;"Cols, Montserrat; Rahman, Adeeb; Maglione, Paul J.; Garcia-Carmona, Yolanda; Simchoni, Noa; Ko, Huai-Bin M.; Radigan, Lin; Cerutti, Andrea; Blankenship, Derek; Pascual, Virginia; Cunningham-Rundles, Charlotte";;;;JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY;APR 2016;2016;137;4;;;;1206;U836;;10.1016/j.jaci.2015.09.013;;;33;6,6;0;0;0;0;0;0;3;8;7;10
Mass cytometry as a platform for the discovery of cellular biomarkers to guide effective rheumatic disease therapy;"Nair, Nitya; Mei, Henrik E.; Chen, Shih-Yu; Hale, Matthew; Nolan, Garry P.; Maecker, Holden T.; Genovese, Mark; Fathman, C. Garrison; Whiting, Chan C.";;;;ARTHRITIS RESEARCH & THERAPY;MAY 18 2015;2015;17;;;;;;;127;10.1186/s13075-015-0644-z;;;33;5,5;0;0;0;0;0;0;7;6;6;11
Cell Surface Profiling Using High-Throughput Flow Cytometry: A Platform for Biomarker Discovery and Analysis of Cellular Heterogeneity;"Gedye, Craig A.; Hussain, Ali; Paterson, Joshua; Smrke, Alannah; Saini, Harleen; Sirskyj, Danylo; Pereira, Keira; Lobo, Nazleen; Stewart, Jocelyn; Go, Christopher; Ho, Jenny; Medrano, Mauricio; Hyatt, Elzbieta; Yuan, Julie; Lauriault, Stevan; Kondratyev, Maria; van den Beucken, Twan; Jewett, Michael; Dirks, Peter; Guidos, Cynthia J.; Danska, Jayne; Wang, Jean; Wouters, Bradly; Neel, Benjamin; Rottapel, Robert; Ailles, Laurie E.";;;;PLOS ONE;AUG 29 2014;2014;9;8;;;;;;e105602;10.1371/journal.pone.0105602;;;33;4,71;0;0;0;0;1;2;3;5;13;5
Leukemia surfaceome analysis reveals new disease-associated features;"Mirkowska, Paulina; Hofmann, Andreas; Sedek, Lukasz; Slamova, Lucie; Mejstrikova, Ester; Szczepanski, Tomasz; Schmitz, Maike; Cario, Gunnar; Stanulla, Martin; Schrappe, Martin; van der Velden, Vincent H. J.; Bornhauser, Beat C.; Wollscheid, Bernd; Bourquin, Jean-Pierre";;;;BLOOD;JUN 20 2013;2013;121;25;;;;E149;E159;;10.1182/blood-2012-11-468702;;;33;4,13;0;0;0;0;2;6;5;6;2;10
Immunotherapy-induced sarcoidosis in patients with melanoma treated with PD-1 checkpoint inhibitors: Case series and immunophenotypic analysis;"Lomax, Anna J.; McGuire, Helen M.; McNeil, Catriona; Choi, Clara J.; Hersey, Peter; Karikios, Deme; Shannon, Kerwin; van Hal, Sebastian; Carr, Urszula; Crotty, Anne; Gupta, Sandeep K.; Hollingsworth, Jane; Kim, Haewon; Fazekas de St Groth, Barbara; McGill, Neil";;;;INTERNATIONAL JOURNAL OF RHEUMATIC DISEASES;SEP 2017;2017;20;9;;;;1277;1285;;10.1111/1756-185X.13076;;;32;8;0;0;0;0;0;0;0;2;12;15
Sensitive detection of rare disease-associated cell subsets via representation learning;"Arvaniti, Eirini; Claassen, Manfred";;;;NATURE COMMUNICATIONS;APR 6 2017;2017;8;;;;;;;14825;10.1038/ncomms14825;;;32;8;0;0;0;0;0;0;0;0;7;18
BET protein bromodomain inhibitor-based combinations are highly active against post-myeloproliferative neoplasm secondary AML cells;"Saenz, D. T.; Fiskus, W.; Manshouri, T.; Rajapakshe, K.; Krieger, S.; Sun, B.; Mill, C. P.; DiNardo, C.; Pemmaraju, N.; Kadia, T.; Parmar, S.; Sharma, S.; Coarfa, C.; Qiu, P.; Verstovsek, S.; Bhalla, K. N.";;;;LEUKEMIA;MAR 2017;2017;31;3;;;;678;687;;10.1038/leu.2016.260;;;32;8;0;0;0;0;0;0;0;10;8;11
Multiparameter Analysis of Stimulated Human Peripheral Blood Mononuclear Cells: A Comparison of Mass and Fluorescence Cytometry;"Nicholas, Katherine J.; Greenplate, Allison R.; Flaherty, David K.; Matlock, Brittany K.; Juan, Juan San; Smith, Rita M.; Irish, Jonathan M.; Kalams, Spyros A.";;;;CYTOMETRY PART A;MAR 2016;2016;89A;3;;;;271;280;;10.1002/cyto.a.22799;;;32;6,4;0;0;0;0;0;0;2;17;6;5
Multiplex miRNA assay using lanthanide-tagged probes and the duplex-specific nuclease amplification strategy;"Zhang, Shixi; Liu, Rui; Xing, Zhi; Zhang, Sichun; Zhang, Xinrong";;;;CHEMICAL COMMUNICATIONS;2016;2016;52;99;;;;14310;14313;;10.1039/c6cc08334j;;;32;6,4;0;0;0;0;0;0;0;6;9;12
Improving Lanthanide Nanocrystal Colloidal Stability in Competitive Aqueous Buffer Solutions using Multivalent PEG-Phosphonate Ligands;"Cao, Pengpeng; Tong, Lemuel; Hou, Yi; Zhao, Guangyao; Guerin, Gerald; Winnik, Mitchell A.; Nitz, Mark";;;;LANGMUIR;SEP 4 2012;2012;28;35;;;;12861;12870;;10.1021/la302690h;;;32;3,56;0;0;1;3;3;6;5;4;4;5
Curious Results with Palladium- and Platinum-Carrying Polymers in Mass Cytometry Bioassays and an Unexpected Application as a Dead Cell Stain;"Majonis, Daniel; Ornatsky, Olga; Kinach, Robert; Winnik, Mitchell A.";;;;BIOMACROMOLECULES;NOV 2011;2011;12;11;;;;3997;4010;;10.1021/bm201011t;;;32;3,2;0;0;4;3;3;4;5;5;5;2
Resistance to Radiotherapy and PD-L1 Blockade Is Mediated by TIM-3 Upregulation and Regulatory T-Cell Infiltration;"Oweida, Ayman; Hararah, Mohammad K.; Phan, Andy; Binder, David; Bhatia, Shilpa; Lennon, Shelby; Bukkapatnam, Sanjana; Van Court, Benjamin; Uyanga, Nomin; Darragh, Laurel; Kim, Hyun Min; Raben, David; Tan, Aik Choon; Heasley, Lynn; Clambey, Eric; Nemenoff, Raphael; Karam, Sana D.";;;;CLINICAL CANCER RESEARCH;NOV 1 2018;2018;24;21;;;;5368;5380;;10.1158/1078-0432.CCR-18-1038;;;31;10,33;0;0;0;0;0;0;0;0;1;17
Single-cell mass cytometry and transcriptome profiling reveal the impact of graphene on human immune cells;"Orecchioni, Marco; Bedognetti, Davide; Newman, Leon; Fuoco, Claudia; Spada, Filomena; Hendrickx, Wouter; Marincola, Francesco M.; Sgarrella, Francesco; Rodrigues, Artur Filipe; Menard-Moyon, Cecilia; Cesareni, Gianni; Kostarelos, Kostas; Bianco, Alberto; Delogu, Lucia G.";;;;NATURE COMMUNICATIONS;OCT 24 2017;2017;8;;;;;;;1109;10.1038/s41467-017-01015-3;;;31;7,75;0;0;0;0;0;0;0;0;12;10
Clustergrammer, a web-based heatmap visualization and analysis tool for high-dimensional biological data;"Fernandez, Nicolas F.; Gundersen, Gregory W.; Rahman, Adeeb; Grimes, Mark L.; Rikova, Klarisa; Hornbeck, Peter; Ma'ayan, Avi";;;;SCIENTIFIC DATA;OCT 10 2017;2017;4;;;;;;;170151;10.1038/sdata.2017.151;;;31;7,75;0;0;0;0;0;0;0;0;9;17
Flow Cytometry: Impact on Early Drug Discovery;"Edwards, Bruce S.; Sklar, Larry A.";;;;JOURNAL OF BIOMOLECULAR SCREENING;JUL 2015;2015;20;6;;;;689;707;;10.1177/1087057115578273;;;31;5,17;0;0;0;0;0;1;5;7;11;4
Single-cell mass cytometry of TCR signaling: Amplification of small initial differences results in low ERK activation in NOD mice;"Mingueneau, Michael; Krishnaswamy, Smita; Spitzer, Matthew H.; Bendall, Sean C.; Stone, Erica L.; Hedrick, Stephen M.; Pe'er, Dana; Mathis, Diane; Nolan, Garry P.; Benoist, Christophe";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;NOV 18 2014;2014;111;46;;;;16466;16471;;10.1073/pnas.1419337111;;;31;4,43;0;0;0;0;1;2;8;7;7;4
Metal-Chelating Polymers by Anionic Ring-Opening Polymerization and Their Use in Quantitative Mass Cytometry;"Illy, Nicolas; Majonis, Daniel; Herrera, Isaac; Omatsky, Olga; Winnik, Mitchell A.";;;;BIOMACROMOLECULES;AUG 2012;2012;13;8;;;;2359;2369;;10.1021/bm300613x;;;31;3,44;0;0;1;4;6;2;2;5;4;6
Identity and Diversity of Human Peripheral Th and T Regulatory Cells Defined by Single-Cell Mass Cytometry;"Kunicki, Matthew A.; Hernandez, Laura C. Amaya; Davis, Kara L.; Bacchetta, Rosa; Roncarolo, Maria-Grazia";;;;JOURNAL OF IMMUNOLOGY;JAN 1 2018;2018;200;1;;;;336;346;;10.4049/jimmunol.1701025;;;30;10;0;0;0;0;0;0;0;0;8;14
Breast Cancer: Multiple Subtypes within a Tumor?;"Yeo, Syn Kok; Guan, Jun-Lin";;;;TRENDS IN CANCER;NOV 2017;2017;3;11;;;;753;760;;10.1016/j.trecan.2017.09.001;;;30;7,5;0;0;0;0;0;0;0;0;4;13
Mass Cytometry: A Highly Multiplexed Single-Cell Technology for Advancing Drug Development;"Atkuri, Kondala R.; Stevens, Jeffrey C.; Neubert, Hendrik";;;;DRUG METABOLISM AND DISPOSITION;FEB 2015;2015;43;2;;;;227;233;;10.1124/dmd.114.060798;;;30;5;0;0;0;0;0;3;3;9;5;7
G-Protein-Coupled Bile Acid Receptor 1 (GPBAR1, TGR5) Agonists Reduce the Production of Proinflammatory Cytokines and Stabilize the Alternative Macrophage Phenotype;"Hoegenauer, Klemens; Arista, Luca; Schmiedeberg, Niko; Werner, Gudrun; Jaksche, Herbert; Bouhelal, Rochdi; Nguyen, Deborah G.; Bhat, B. Ganesh; Raad, Layla; Rauld, Celine; Carballido, Jose M.";;;;JOURNAL OF MEDICINAL CHEMISTRY;DEC 25 2014;2014;57;24;;;;10343;10354;;10.1021/jm501052c;;;30;4,29;0;0;0;0;0;1;4;8;5;7
Multidimensional analyses reveal distinct immune microenvironment in hepatitis B virus-related hepatocellular carcinoma;"Lim, Chun Jye; Lee, Yun Hua; Pan, Lu; Lai, Liyun; Chua, Camillus; Wasser, Martin; Lim, Tony Kiat Hon; Yeong, Joe; Toh, Han Chong; Lee, Ser Yee; Chan, Chung Yip; Goh, Brian K. P.; Chung, Alexander; Heikenwaelder, Mathias; Ng, Irene O. L.; Chow, Pierce; Albani, Salvatore; Chew, Valerie";;;;GUT;MAY 2019;2019;68;5;;;;916;927;;10.1136/gutjnl-2018-316510;;;29;14,5;0;0;0;0;0;0;0;0;1;17
A Frameshift in CSF2RB Predominant Among Ashkenazi Jews Increases Risk for Crohn's Disease and Reduces Monocyte Signaling via GM-CSF;"Chuang, Ling-Shiang; Villaverde, Nicole; Hui, Ken Y.; Mortha, Arthur; Rahman, Adeeb; Levine, Adam P.; Haritunians, Talin; Ng, Sok Meng Evelyn; Zhang, Wei; Hsu, Nai-Yun; Facey, Jody-Ann; Luong, Tramy; Fernandez-Hernandez, Heriberto; Li, Dalin; Rivas, Manuel; Schiff, Elena R.; Gusev, Alexander; Schumm, L. Phillip; Bowen, Beatrice M.; Sharma, Yashoda; Ning, Kaida; Remark, Romain; Gnjatic, Sacha; Legnani, Peter; George, James; Sands, Bruce E.; Stempak, Joanne M.; Datta, Lisa W.; Lipka, Seth; Katz, Seymour; Cheifetz, Adam S.; Barzilai, Nir; Pontikos, Nikolas; Abraham, Clara; Dubinsky, Marla J.; Targan, Stephan; Taylor, Kent; Rotter, Jerome I.; Scherl, Ellen J.; Desnick, Robert J.; Abreu, Maria T.; Zhao, Hongyu; Atzmon, Gil; Pe'er, Itsik; Kugathasan, Subra; Hakonarson, Hakon; McCauley, Jacob L.; Lencz, Todd; Darvasi, Ariel; Plagnol, Vincent; Silverberg, Mark S.; Muise, Aleixo M.; Brant, Steven R.; Daly, Mark J.; Segal, Anthony W.; Duerr, Richard H.; Merad, Miriam; McGovern, Dermot P. B.; Peter, Inga; Cho, Judy H.";;;;GASTROENTEROLOGY;OCT 2016;2016;151;4;;;;710;+;;10.1053/j.gastro.2016.06.045;;;29;5,8;0;0;0;0;0;0;2;5;10;10
Cytosplore: Interactive Immune Cell Phenotyping for Large Single-Cell Datasets;"Hoellt, T.; Pezzotti, N.; van Unen, V.; Koning, F.; Eisemann, E.; Lelieveldt, B.; Vilanova, A.";;;;COMPUTER GRAPHICS FORUM;JUN 2016;2016;35;3;;;;171;180;;10.1111/cgf.12893;18th Eurographics/IEEE VGTC Conference on Visualization;JUN 06-10, 2016;29;5,8;0;0;0;0;0;0;0;2;6;13
Predictive markers of safety and immunogenicity of adjuvanted vaccines;"Mastelic, Beatris; Garcon, Nathalie; Del Giudice, Giuseppe; Golding, Hana; Gruber, Marion; Neels, Pieter; Fritzell, Bernard";;;;BIOLOGICALS;NOV 2013;2013;41;6;;;;458;468;;10.1016/j.biologicals.2013.08.006;;;29;3,63;0;0;0;0;4;10;5;5;2;2
New assays for monitoring residual HIV burden in effectively treated individuals;"Strain, Matthew C.; Richman, Douglas D.";;;;CURRENT OPINION IN HIV AND AIDS;MAR 2013;2013;8;2;;;;106;110;;10.1097/COH.0b013e32835d811b;;;29;3,63;0;0;0;5;9;4;4;3;3;1
Self-Assembled Nanoparticles from Phenolic Derivatives for Cancer Therapy;"Dai, Yunlu; Guo, Junling; Wang, Ting-Yi; Ju, Yi; Mitchell, Andrew J.; Bonnard, Thomas; Cui, Jiwei; Richardson, Joseph J.; Hagemeyer, Christoph E.; Alt, Karen; Caruso, Frank";;;;ADVANCED HEALTHCARE MATERIALS;AUG 23 2017;2017;6;16;;;;;;1700467;10.1002/adhm.201700467;;;28;7;0;0;0;0;0;0;0;0;6;18
Host sirtuin 1 regulates mycobacterial immunopathogenesis and represents a therapeutic target against tuberculosis;"Cheng, Catherine Y.; Gutierrez, Nuria M.; Marzuki, Mardiana B.; Lu, Xiaohua; Foreman, Taylor W.; Paleja, Bhairav; Lee, Bernett; Balachander, Akhila; Chen, Jinmiao; Tsenova, Liana; Kurepina, Natalia; Teng, Karen W. W.; West, Kim; Mehra, Smriti; Zolezzi, Francesca; Poidinger, Michael; Kreiswirth, Barry; Kaushal, Deepak; Kornfeld, Hardy; Newell, Evan W.; Singhal, Amit";;;;SCIENCE IMMUNOLOGY;MAR 2017;2017;2;9;;;;;;eaaj1789;10.1126/sciimmunol.aaj1789;;;28;7;0;0;0;0;0;0;0;2;9;13
Biodistribution of cisplatin revealed by imaging mass cytometry identifies extensive collagen binding in tumor and normal tissues;"Chang, Qing; Ornatsky, Olga I.; Siddiqui, Iram; Straus, Rita; Baranov, Vladimir I.; Hedley, David W.";;;;SCIENTIFIC REPORTS;NOV 4 2016;2016;6;;;;;;;36641;10.1038/srep36641;;;28;5,6;0;0;0;0;0;0;0;6;9;10
Revealing the diversity of extracellular vesicles using high-dimensional flow cytometry analyses;"Marcoux, Genevieve; Duchez, Anne-Claire; Cloutier, Nathalie; Provost, Patrick; Nigrovic, Peter A.; Boilard, Eric";;;;SCIENTIFIC REPORTS;OCT 27 2016;2016;6;;;;;;;35928;10.1038/srep35928;;;28;5,6;0;0;0;0;0;0;0;4;7;12
Patient-specific Immune States before Surgery Are Strong Correlates of Surgical Recovery;"Fragiadakis, Gabriela K.; Gaudilliere, Brice; Ganio, Edward A.; Aghaeepour, Nima; Tingle, Martha; Nolan, Garry P.; Angst, Martin S.";;;;ANESTHESIOLOGY;DEC 2015;2015;123;6;;;;1241;1255;;10.1097/ALN.0000000000000887;;;28;4,67;0;0;0;0;0;0;4;9;8;4
Bright Fluorescent Nanotags from Bottlebrush Polymers with DNA-Tipped Bristles;"Fouz, Munira F.; Mukumoto, Kosuke; Averick, Saadyah; Molinar, Olivia; McCartney, Brooke M.; Matyjaszewski, Krzysztof; Armitage, Bruce A.; Das, Subha R.";;;;ACS CENTRAL SCIENCE;NOV 25 2015;2015;1;8;;;;431;438;;10.1021/acscentsci.5b00259;;;28;4,67;0;0;0;0;0;0;6;4;9;5
Automatic Single Cell Segmentation on Highly Multiplexed Tissue Images;"Schueffler, Peter J.; Schapiro, Denis; Giesen, Charlotte; Wang, Hao A. O.; Bodenmiller, Bernd; Buhmann, Joachim M.";;;;CYTOMETRY PART A;OCT 2015;2015;87A;10;;;;936;942;;10.1002/cyto.a.22702;;;28;4,67;0;0;0;0;0;1;7;8;3;8
Implementing Mass Cytometry at the Bedside to Study the Immunological Basis of Human Diseases: Distinctive Immune Features in Patients with a History of Term or Preterm Birth;"Gaudilliere, Brice; Ganio, Edward A.; Tingle, Martha; Lancero, Hope L.; Fragiadakis, Gabriela K.; Baca, Quentin J.; Aghaeepour, Nima; Wong, Ronald J.; Quaintance, Cele; El-Sayed, Yasser Y.; Shaw, Gary M.; Lewis, David B.; Stevenson, David K.; Nolan, Garry P.; Angst, Martin S.";;;;CYTOMETRY PART A;SEP 2015;2015;87A;9;;;;817;829;;10.1002/cyto.a.22720;;;28;4,67;0;0;0;0;0;1;9;8;3;5
immunoClust-An automated analysis pipeline for the identification of immunophenotypic signatures in high-dimensional cytometric datasets;"Soerensen, Till; Baumgart, Sabine; Durek, Pawel; Gruetzkau, Andreas; Haeupl, Thomas";;;;CYTOMETRY PART A;JUL 2015;2015;87A;7;;;SI;603;615;;10.1002/cyto.a.22626;;;28;4,67;0;0;0;0;0;0;5;3;12;4
High-Dimensional Single-Cell Cancer Biology;"Irish, Jonathan M.; Doxie, Deon B.";;;"Fienberg, HG; Nolan, GP";HIGH-DIMENSIONAL SINGLE CELL ANALYSIS: MASS CYTOMETRY, MULTI-PARAMETRIC FLOW CYTOMETRY AND BIOINFORMATIC TECHNIQUES;2014;2014;377;;;;;1;21;;10.1007/82_2014_367;;;28;4;0;0;0;0;1;6;6;4;6;4
A Map of Human Type 1 Diabetes Progression by Imaging Mass Cytometry;"Damond, Nicolas; Engler, Stefanie; Zanotelli, Vito R. T.; Schapiro, Denis; Wasserfall, Clive H.; Kusmartseva, Irina; Nick, Harry S.; Thorel, Fabrizio; Herrera, Pedro L.; Atkinson, Mark A.; Bodenmiller, Bernd";;;;CELL METABOLISM;MAR 5 2019;2019;29;3;;;;755;+;;10.1016/j.cmet.2018.11.014;;;27;13,5;0;0;0;0;0;0;0;0;0;15
Methods for high-dimensonal analysis of cells dissociated from cyropreserved synovial tissue;"Donlin, Laura T.; Rao, Deepak A.; Wei, Kevin; Slowikowski, Kamil; McGeachy, Mandy J.; Turner, Jason D.; Meednu, Nida; Mizoguchi, Fumitaka; Gutierrez-Arcelus, Maria; Lieb, David J.; Keegan, Joshua; Muskat, Kaylin; Hillman, Joshua; Rozo, Cristina; Ricker, Edd; Eisenhaure, Thomas M.; Li, Shuqiang; Browne, Edward P.; Chicoine, Adam; Sutherby, Danielle; Noma, Akiko; Nusbaum, Chad; Kelly, Stephen; Pernis, Alessandra B.; Ivashkiv, Lionel B.; Goodman, Susan M.; Robinson, William H.; Utz, Paul J.; Lederer, James A.; Gravallese, Ellen M.; Boyce, Brendan F.; Hacohen, Nir; Pitzalis, Costantino; Gregersen, Peter K.; Firestein, Gary S.; Raychaudhuri, Soumya; Moreland, Larry W.; Holers, V. Michael; Bykerk, Vivian P.; Filer, Andrew; Boyle, David L.; Brenner, Michael B.; Anolik, Jennifer H.";Accelerating Med Partnership RA SL;;;ARTHRITIS RESEARCH & THERAPY;JUL 11 2018;2018;20;;;;;;;139;10.1186/s13075-018-1631-y;;;27;9;0;0;0;0;0;0;0;0;2;15
Single-cell developmental classification of B cell precursor acute lymphoblastic leukemia at diagnosis reveals predictors of relapse;"Good, Zinaida; Sarno, Jolanda; Jager, Astraea; Samusik, Nikolay; Aghaeepour, Nima; Simonds, Erin F.; White, Leah; Lacayo, Norman J.; Fantl, Wendy J.; Fazio, Grazia; Gaipa, Giuseppe; Biondi, Andrea; Tibshirani, Robert; Bendall, Sean C.; Nolan, Garry P.; Davis, Kara L.";;;;NATURE MEDICINE;APR 2018;2018;24;4;;;;474;+;;10.1038/nm.4505;;;27;9;0;0;0;0;0;0;0;0;6;14
Assessing basophil activation by using flow cytometry and mass cytometry in blood stored 24 hours before analysis;"Mukai, Kaori; Gaudenzio, Nicolas; Gupta, Sheena; Vivanco, Nora; Bendall, Sean C.; Maecker, Holden T.; Chinthrajah, Rebecca S.; Tsai, Mindy; Nadeau, Kari C.; Galli, Stephen J.";;;;JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY;MAR 2017;2017;139;3;;;;889;+;;10.1016/j.jaci.2016.04.060;;;27;6,75;0;0;0;0;0;0;0;8;8;6
Mass Cytometry Analysis Shows That a Novel Memory Phenotype B Cell Is Expanded in Multiple Myeloma;"Hansmann, Leo; Blum, Lisa; Ju, Chia-Hsin; Liedtke, Michaela; Robinson, William H.; Davis, Mark M.";;;;CANCER IMMUNOLOGY RESEARCH;JUN 2015;2015;3;6;;;;650;660;;10.1158/2326-6066.CIR-14-0236-T;;;27;4,5;0;0;0;0;0;1;9;10;5;1
Immune cell census in murine atherosclerosis: cytometry by time of flight illuminates vascular myeloid cell diversity;"Cole, Jennifer E.; Park, Inhye; Ahern, David J.; Kassiteridi, Christina; Abeam, Dina Danso; Goddard, Michael E.; Green, Patricia; Maffia, Pasquale; Monaco, Claudia";;;;CARDIOVASCULAR RESEARCH;AUG 1 2018;2018;114;10;;;;1360;1371;;10.1093/cvr/cvy109;;;26;8,67;0;0;0;0;0;0;0;0;5;13
Commonly Occurring Cell Subsets in High-Grade Serous Ovarian Tumors Identified by Single-Cell Mass Cytometry;"Gonzalez, Veronica D.; Samusik, Nikolay; Chen, Tiffany J.; Savig, Erica S.; Aghaeepour, Nima; Quigley, David A.; Huang, Ying-Wen; Giangarra, Valeria; Borowsky, Alexander D.; Hubbard, Neil E.; Chen, Shih-Yu; Han, Guojun; Ashworth, Alan; Kipps, Thomas J.; Berek, Jonathan S.; Nolan, Garry P.; Fantl, Wendy J.";;;;CELL REPORTS;FEB 13 2018;2018;22;7;;;;1875;1888;;10.1016/j.celrep.2018.01.053;;;26;8,67;0;0;0;0;0;0;0;0;4;19
Clinical response to PD-1 blockade correlates with a sub-fraction of peripheral central memory CD4(+) T cells in patients with malignant melanoma;"Takeuchi, Yoshiko; Tanemura, Atsushi; Tada, Yasuko; Katayama, Ichiro; Kumanogoh, Atsushi; Nishikawa, Hiroyoshi";;;;INTERNATIONAL IMMUNOLOGY;JAN 2018;2018;30;1;;;;13;22;;10.1093/intimm/dxx073;;;26;8,67;0;0;0;0;0;0;0;0;4;17
Removal of batch effects using distribution-matching residual networks;"Shaham, Uri; Stanton, Kelly P.; Zhao, Jun; Li, Huamin; Raddassi, Khadir; Montgomery, Ruth; Kluger, Yuval";;;;BIOINFORMATICS;AUG 15 2017;2017;33;16;;;;2539;2546;;10.1093/bioinformatics/btx196;;;26;6,5;0;0;0;0;0;0;0;0;7;12
Cytometry-based single-cell analysis of intact epithelial signaling reveals MAPK activation divergent from TNF-alpha-induced apoptosis in vivo;"Simmons, Alan J.; Banerjee, Amrita; McKinley, Eliot T.; Scurrah, Cherie' R.; Herring, Charles A.; Gewin, Leslie S.; Masuzaki, Ryota; Karp, Seth J.; Franklin, Jeffrey L.; Gerdes, Michael J.; Irish, Jonathan M.; Coffey, Robert J.; Lau, Ken S.";;;;MOLECULAR SYSTEMS BIOLOGY;OCT 2015;2015;11;10;;;;;;835;10.15252/msb.20156282;;;26;4,33;0;0;0;0;0;0;8;6;4;5
Activation of Salmonella Typhi-Specific Regulatory T Cells in Typhoid Disease in a Wild-Type S. Typhi Challenge Model;"McArthur, Monica A.; Fresnay, Stephanie; Magder, Laurence S.; Darton, Thomas C.; Jones, Claire; Waddington, Claire S.; Blohmke, Christoph J.; Dougan, Gordon; Angus, Brian; Levine, Myron M.; Pollard, Andrew J.; Sztein, Marcelo B.";;;;PLOS PATHOGENS;MAY 2015;2015;11;5;;;;;;e1004914;10.1371/journal.ppat.1004914;;;26;4,33;0;0;0;0;0;0;6;10;2;6
High-throughput, multiparameter analysis of single cells;"Haselgruebler, Thomas; Haider, Michaela; Ji, Bozhi; Juhasz, Kata; Sonnleitner, Alois; Balogi, Zsolt; Hesse, Jan";;;;ANALYTICAL AND BIOANALYTICAL CHEMISTRY;MAY 2014;2014;406;14;;;;3279;3296;;10.1007/s00216-013-7485-x;;;26;3,71;0;0;0;0;1;1;8;7;0;9
Deconstructing stem cell population heterogeneity: Single-cell analysis and modeling approaches;"Wu, Jincheng; Tzanakakis, Emmanuel S.";;;;BIOTECHNOLOGY ADVANCES;NOV 15 2013;2013;31;7;;;SI;1047;1062;;10.1016/j.biotechadv.2013.09.001;;;26;3,25;0;0;0;0;1;7;3;5;4;6
A Beginner's Guide to Analyzing and Visualizing Mass Cytometry Data;"Kimball, Abigail K.; Oko, Lauren M.; Bullock, Bonnie L.; Nemenoff, Raphael A.; van Dyk, Linda F.; Clambey, Eric T.";;;;JOURNAL OF IMMUNOLOGY;JAN 1 2018;2018;200;1;;;;3;22;;10.4049/jimmunol.1701494;;;25;8,33;0;0;0;0;0;0;0;0;4;16
Testing for differential abundance in mass cytometry data;"Lun, Aaron T. L.; Richard, Arianne C.; Marioni, John C.";;;;NATURE METHODS;JUL 2017;2017;14;7;;;;707;+;;10.1038/nmeth.4295;;;25;6,25;0;0;0;0;0;0;0;1;6;15
Optimized multiplex immunofluorescence single-cell analysis reveals tuft cell heterogeneity;"McKinley, Eliot T.; Sui, Yunxia; Al-Kofahi, Yousef; Millis, Bryan A.; Tyska, Matthew J.; Roland, Joseph T.; Santamaria-Pang, Alberto; Ohland, Christina L.; Jobin, Christian; Franklin, Jeffrey L.; Lau, Ken S.; Gerdes, Michael J.; Coffey, Robert J.";;;;JCI INSIGHT;JUN 2 2017;2017;2;11;;;;;;e93487;10.1172/jci.insight.93487;;;25;6,25;0;0;0;0;0;0;0;1;11;6
Pregnancy Does Not Attenuate the Antibody or Plasmablast Response to Inactivated Influenza Vaccine;"Kay, Alexander W.; Bayless, Nicholas L.; Fukuyama, Julia; Aziz, Natali; Dekker, Cornelia L.; Mackey, Sally; Swan, Gary E.; Davis, Mark M.; Blish, Catherine A.";;;;JOURNAL OF INFECTIOUS DISEASES;SEP 15 2015;2015;212;6;;;;861;870;;10.1093/infdis/jiv138;;;25;4,17;0;0;0;0;0;1;4;4;5;6
Synthetically Modified Viral Capsids as Versatile Carriers for Use in Antibody-Based Cell Targeting;"ElSohly, Adel M.; Netirojjanakul, Chawita; Aanei, Ioana L.; Jager, Astraea; Bendall, Sean C.; Farkas, Michelle E.; Nolan, Garry P.; Francis, Matthew B.";;;;BIOCONJUGATE CHEMISTRY;AUG 2015;2015;26;8;;;;1590;1596;;10.1021/acs.bioconjchem.5b00226;;;25;4,17;0;0;0;0;0;0;6;4;10;3
Synthesis of Polyglutamide-Based Metal-Chelating Polymers and Their Site-Specific Conjugation to Trastuzumab for Auger Electron Radioimmunotherapy;"Lu, Yijie; Mbong, Ghislaine Ngo Ndjock; Liu, Peng; Chan, Conrad; Cai, Zhongli; Weinrich, Dirk; Boyle, Amanda J.; Reilly, Raymond M.; Winnik, Mitchell A.";;;;BIOMACROMOLECULES;JUN 2014;2014;15;6;;;;2027;2037;;10.1021/bm500174p;;;25;3,57;0;0;0;0;0;4;6;5;5;4
Mass Cytometry: Protocol for Daily Tuning and Running Cell Samples on a CyTOF Mass Cytometer;"Leipold, Michael D.; Maecker, Holden T.";;;;JOVE-JOURNAL OF VISUALIZED EXPERIMENTS;NOV 2012;2012;;69;;;;;;e4398;10.3791/4398;;;25;2,78;0;0;0;1;1;7;2;4;3;7
Systemic innate immune activation in food protein-induced enterocolitis syndrome;"Goswami, Ritobrata; Blazquez, Ana Belen; Kosoy, Roman; Rahman, Adeeb; Nowak-Wegrzyn, Anna; Berin, M. Cecilia";;;;JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY;JUN 2017;2017;139;6;;;;1885;+;;10.1016/j.jaci.2016.12.971;;;24;6;0;0;0;0;0;0;0;3;10;8
Characterizing cell subsets using marker enrichment modeling;"Diggins, Kirsten E.; Greenplate, Allison R.; Leelatian, Nalin; Wogsland, Cara E.; Irish, Jonathan M.";;;;NATURE METHODS;MAR 2017;2017;14;3;;;;275;+;;10.1038/NMETH.4149;;;24;6;0;0;0;0;0;0;0;4;5;12
Standardization and quality control for high-dimensional mass cytometry studies of human samples;"Kleinsteuber, Katja; Corleis, Bjoern; Rashidi, Narges; Nchinda, Nzuekoh; Lisanti, Antonella; Cho, Josalyn L.; Medoff, Benjamin D.; Kwon, Douglas; Walker, Bruce D.";;;;CYTOMETRY PART A;OCT 2016;2016;89A;10;;;;903;913;;10.1002/cyto.a.22935;;;24;4,8;0;0;0;0;0;0;0;6;6;9
Metal-containing polystyrene beads as standards for mass cytometry;"Abdelrahman, Ahmed I.; Ornatsky, Olga; Bandura, Dmitry; Baranov, Vladimir; Kinach, Robert; Dai, Sheng; Thickett, Stuart C.; Tanner, Scott; Winnik, Mitchell A.";;;;JOURNAL OF ANALYTICAL ATOMIC SPECTROMETRY;2010;2010;25;3;;;;260;268;;10.1039/b921770c;;;24;2,18;2;3;4;6;2;2;0;1;0;1
High-Dimensional Single-Cell Cartography Reveals Novel Skeletal Muscle-Resident Cell Populations;"Giordani, Lorenzo; He, Gary J.; Negroni, Elisa; Sakai, Hiroshi; Law, Justin Y. C.; Siu, M. Mona; Wan, Raymond; Corneau, Aurelien; Tajbakhsh, Shahragim; Cheung, Tom H.; Le Grand, Fabien";;;;MOLECULAR CELL;MAY 2 2019;2019;74;3;;;;609;+;;10.1016/j.molcel.2019.02.026;;;23;11,5;0;0;0;0;0;0;0;0;0;10
Multiplexed In Situ Imaging Mass Cytometry Analysis of the Human Endocrine Pancreas and Immune System in Type 1 Diabetes;"Wang, Yue J.; Traum, Daniel; Schug, Jonathan; Gao, Long; Liu, Chengyang; Atkinson, Mark A.; Powers, Alvin C.; Feldman, Michael D.; Naji, Ali; Chang, Kyong-Mi; Kaestner, Klaus H.";HPAP Consortium;;;CELL METABOLISM;MAR 5 2019;2019;29;3;;;;769;+;;10.1016/j.cmet.2019.01.003;;;23;11,5;0;0;0;0;0;0;0;0;0;14
Memory CD4(+) T cells are generated in the human fetal intestine;"Li, Na; van Unen, Vincent; Abdelaal, Tamim; Guo, Nannan; Kasatskaya, Sofya A.; Ladell, Kristin; McLaren, James E.; Egorov, Evgeny S.; Izraelson, Mark; Lopes, Susana M. Chuva de Sousa; Hollt, Thomas; Britanova, Olga V.; Eggermont, Jeroen; de Miranda, Noel F. C. C.; Chudakov, Dmitriy M.; Price, David A.; Lelieveldt, Boudewijn P. F.; Koning, Frits";;;;NATURE IMMUNOLOGY;MAR 2019;2019;20;3;;;;301;+;;10.1038/s41590-018-0294-9;;;23;11,5;0;0;0;0;0;0;0;0;0;10
A cluster of immunoresolvents links coagulation to innate host defense in human blood;"Norris, Paul C.; Libreros, Stephania; Chiang, Nan; Serhan, Charles N.";;;;SCIENCE SIGNALING;AUG 1 2017;2017;10;490;;;;;;eaan1471;10.1126/scisignal.aan1471;;;23;5,75;0;0;0;0;0;0;0;1;9;8
Regulation of Adaptive NK Cells and CD8 T Cells by HLA-C Correlates with Allogeneic Hematopoietic Cell Transplantation and with Cytomegalovirus Reactivation;"Horowitz, Amir; Guethlein, Lisbeth A.; Nemat-Gorgani, Neda; Norman, Paul J.; Cooley, Sarah; Miller, Jeffrey S.; Parham, Peter";;;;JOURNAL OF IMMUNOLOGY;NOV 1 2015;2015;195;9;;;;4524;4536;;10.4049/jimmunol.1401990;;;23;3,83;0;0;0;0;0;0;7;10;1;3
A Mine Is a Terrible Thing to Waste: High Content, Single Cell Technologies for Comprehensive Immune Analysis;"Chattopadhyay, P. K.; Roederer, M.";;;;AMERICAN JOURNAL OF TRANSPLANTATION;MAY 2015;2015;15;5;;;;1155;1161;;10.1111/ajt.13193;;;23;3,83;0;0;0;0;0;2;3;8;8;2
Monitoring the immune competence of cancer patients to predict outcome;"Chang, Serena; Kohrt, Holbrook; Maecker, Holden T.";;;;CANCER IMMUNOLOGY IMMUNOTHERAPY;JUL 2014;2014;63;7;;;;713;719;;10.1007/s00262-014-1521-3;;;23;3,29;0;0;0;0;0;4;5;5;3;3
From Cellular Characteristics to Disease Diagnosis: Uncovering Phenotypes with Supercells;"Candia, Julian; Maunu, Ryan; Driscoll, Meghan; Biancotto, Angelique; Dagur, Pradeep; McCoy, J. Philip, Jr.; Sen, H. Nida; Wei, Lai; Maritan, Amos; Cao, Kan; Nussenblatt, Robert B.; Banavar, Jayanth R.; Losert, Wolfgang";;;;PLOS COMPUTATIONAL BIOLOGY;SEP 2013;2013;9;9;;;;;;e1003215;10.1371/journal.pcbi.1003215;;;23;2,88;0;0;0;0;3;5;5;4;3;1
Surface Functionalization Methods To Enhance Bioconjugation in Metal-Labeled Polystyrene Particles;"Abderahman, Ahmed I.; Thickett, Stuart C.; Liang, Yi; Ornatsky, Olga; Baranov, Vladimir; Winnik, Mitchell A.";;;;MACROMOLECULES;JUN 28 2011;2011;44;12;;;;4801;4813;;10.1021/ma200582q;;;23;2,3;0;0;2;6;3;2;4;2;1;3
Plasmacytoid dendritic cells develop from Ly6D(+) lymphoid progenitors distinct from the myeloid lineage;"Dress, Regine J.; Dutertre, Charles-Antoine; Giladi, Amir; Schlitzer, Andreas; Low, Ivy; Shadan, Nurhidaya Binte; Tay, Alicia; Lum, Josephine; Kairi, Muhammad Faris Bin Mohd; Hwang, You Yi; Becht, Etienne; Cheng, Yang; Chevrier, Marion; Larbi, Anis; Newell, Evan W.; Amit, Ido; Chen, Jinmiao; Ginhoux, Florent";;;;NATURE IMMUNOLOGY;JUL 2019;2019;20;7;;;;852;+;;10.1038/s41590-019-0420-3;;;22;11;0;0;0;0;0;0;0;0;0;9
Defining human cardiac transcription factor hierarchies using integrated single-cell heterogeneity analysis;"Churko, Jared M.; Garg, Priyanka; Treutlein, Barbara; Venkatasubramanian, Meenakshi; Wu, Haodi; Lee, Jaecheol; Wessells, Quinton N.; Chen, Shih-Yu; Chen, Wen-Yi; Chetal, Kashish; Mantalas, Gary; Neff, Norma; Jabart, Eric; Sharma, Arun; Nolan, Garry P.; Salomonis, Nathan; Wu, Joseph C.";;;;NATURE COMMUNICATIONS;NOV 21 2018;2018;9;;;;;;;4906;10.1038/s41467-018-07333-4;;;22;7,33;0;0;0;0;0;0;0;0;0;10
Identification of an Early Unipotent Neutrophil Progenitor with Pro-tumoral Activity in Mouse and Human Bone Marrow;"Zhu, Yanfang Peipei; Padgett, Lindsey; Dinh, Huy Q.; Marcovecchio, Paola; Blatchley, Amy; Wu, Runpei; Ehinger, Erik; Kim, Cheryl; Mikulski, Zbigniew; Seumois, Gregory; Madrigal, Ariel; Vijayanand, Pandurangan; Hedrick, Catherine C.";;;;CELL REPORTS;AUG 28 2018;2018;24;9;;;;2329;+;;10.1016/j.celrep.2018.07.097;;;22;7,33;0;0;0;0;0;0;0;0;1;13
Deep immune profiling by mass cytometry links human T and NK cell differentiation and cytotoxic molecule expression patterns;"Bengsch, Bertram; Ohtani, Takuya; Herati, Ramin Sedaghat; Bovenschen, Niels; Chang, Kyong-Mi; Wherry, E. John";;;;JOURNAL OF IMMUNOLOGICAL METHODS;FEB 2018;2018;453;;;;SI;3;10;;10.1016/j.jim.2017.03.009;;;22;7,33;0;0;0;0;0;0;0;0;6;9
Systematic single-cell analysis provides new insights into heterogeneity and plasticity of the pancreas;"Tritschler, Sophie; Theis, Fabian J.; Licked, Heiko; Boettcher, Anika";;;;MOLECULAR METABOLISM;SEP 2017;2017;6;9;;;SI;974;990;;10.1016/j.molmet.2017.06.021;;;22;5,5;0;0;0;0;0;0;0;0;4;13
Mass cytometry analysis reveals hyperactive NF Kappa B signaling in myelofibrosis and secondary acute myeloid leukemia;"Fisher, D. A. C.; Malkova, O.; Engle, E. K.; Miner, C. A.; Fulbright, M. C.; Behbehani, G. K.; Collins, T. B.; Bandyopadhyay, S.; Zhou, A.; Nolan, G. P.; Oh, S. T.";;;;LEUKEMIA;SEP 2017;2017;31;9;;;;1962;1974;;10.1038/leu.2016.377;;;22;5,5;0;0;0;0;0;0;0;2;8;7
Reconstitution of immune cell populations in multiple sclerosis patients after autologous stem cell transplantation;"Karnell, F. G.; Lin, D.; Motley, S.; Duhen, T.; Lim, N.; Campbell, D. J.; Turka, L. A.; Maecker, H. T.; Harris, K. M.";;;;CLINICAL AND EXPERIMENTAL IMMUNOLOGY;SEP 2017;2017;189;3;;;;268;278;;10.1111/cei.12985;;;22;5,5;0;0;0;0;0;0;0;0;10;8
Comprehensive Mass Cytometry Analysis of Cell Cycle, Activation, and Coinhibitory Receptors Expression in CD4 T Cells from Healthy and HIV-Infected Individuals;"Corneau, Aurelien; Cosma, Antonio; Even, Sophie; Katlama, Christine; Le Grand, Roger; Frachet, Veronique; Blanc, Catherine; Autran, Brigitte";;;;CYTOMETRY PART B-CLINICAL CYTOMETRY;JAN 2017;2017;92;1;;;SI;21;32;;10.1002/cyto.b.21502;;;22;5,5;0;0;0;0;0;0;0;7;8;6
Mass cytometry panel optimization through the designed distribution of signal interference;"Takahashi, Chikara; Au-Yeung, Amelia; Fuh, Franklin; Ramirez-Montagut, Teresa; Bolen, Chris; Mathews, William; O'Gorman, William E.";;;;CYTOMETRY PART A;JAN 2017;2017;91A;1;;;SI;39;47;;10.1002/cyto.a.22977;;;22;5,5;0;0;0;0;0;0;0;2;4;14
Heparin reduces nonspecific eosinophil staining artifacts in mass cytometry experiments;"Rahman, Adeeb H.; Tordesillas, Leticia; Berin, M. Cecilia";;;;CYTOMETRY PART A;JUN 2016;2016;89A;6;;;;601;607;;10.1002/cyto.a.22826;;;22;4,4;0;0;0;0;0;0;1;3;4;9
Next Generation Ligand Binding Assays-Review of Emerging Technologies' Capabilities to Enhance Throughput and Multiplexing;"Mora, Johanna; Chunyk, Allison Given; Dysinger, Mark; Purushothama, Shobha; Ricks, Claude; Otsterlund, Karolina; Theobald, Valerie";;;;AAPS JOURNAL;NOV 2014;2014;16;6;;;;1175;1184;;10.1208/s12248-014-9660-1;;;22;3,14;0;0;0;0;0;1;7;5;4;4
The Split Virus Influenza Vaccine rapidly activates immune cells through Fc gamma receptors;"O'Gorman, William E.; Huang, Huang; Wei, Yu-Ling; Davis, Kara L.; Leipold, Michael D.; Bendall, Sean C.; Kidd, Brian A.; Dekker, Cornelia L.; Maecker, Holden T.; Chien, Yueh-Hsiu; Davis, Mark M.";;;;VACCINE;OCT 14 2014;2014;32;45;;;;5989;5997;;10.1016/j.vaccine.2014.07.115;;;22;3,14;0;0;0;0;0;6;4;4;4;2
MET Inhibitors Promote Liver Tumor Evasion of the Immune Response by Stabilizing PDL1;"Li, Hui; Li, Chia-Wei; Li, Xiaoqiang; Din, Qingqing; Guo, Lei; Liu, Shuang; Liu, Chunxiao; Lai, Chien-Chen; Hsu, Jung-Mao; Dong, Qiongzhu; Xia, Weiya; Hsu, Jennifer L.; Yamaguchi, Hirohito; Du, Yi; Lai, Yun-Ju; Sun, Xian; Koller, Paul B.; Ye, Qinghai; Hung, Mien-Chie";;;;GASTROENTEROLOGY;MAY 2019;2019;156;6;;;;1849;+;;10.1053/j.gastro.2019.01.252;;;21;10,5;0;0;0;0;0;0;0;0;0;7
Macrophage Biology, Classification, and Phenotype in Cardiovascular Disease JACC Macrophage in CVD Series (Part 1);"Williams, Jesse W.; Giannarelli, Chiara; Rahman, Adeeb; Randolph, Gwendalyn J.; Kovacic, Jason C.";;;;JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY;OCT 30 2018;2018;72;18;;;;2166;2180;;10.1016/j.jacc.2018.08.2148;;;21;7;0;0;0;0;0;0;0;0;0;10
Mass cytometry: a powerful tool for dissecting the immune landscape;"Simoni, Yannick; Chng, Melissa Hui Yen; Li, Shamin; Fehlings, Michael; Newell, Evan W.";;;;CURRENT OPINION IN IMMUNOLOGY;APR 2018;2018;51;;;;;187;196;;10.1016/j.coi.2018.03.023;;;21;7;0;0;0;0;0;0;0;0;2;13
Mass cytometry deep phenotyping of human mononuclear phagocytes and myeloid-derived suppressor cells from human blood and bone marrow;"Roussel, Mikael; Ferrell, P. Brent, Jr.; Greenplate, Allison R.; Lhomme, Faustine; Le Gallou, Simon; Diggins, Kirsten E.; Johnson, Douglas B.; Irish, Jonathan M.";;;;JOURNAL OF LEUKOCYTE BIOLOGY;AUG 2017;2017;102;2;;;;437;447;;10.1189/jlb.5MA1116-457R;;;21;5,25;0;0;0;0;0;0;0;1;6;11
Single-cell transcriptional analysis of normal, aberrant, and malignant hematopoiesis in zebrafish;"Moore, Finola E.; Garcia, Elaine G.; Lobbardi, Riadh; Jain, Esha; Tang, Qin; Moore, John C.; Cortes, Mauricio; Molodtsov, Aleksey; Kasheta, Melissa; Luo, Christina C.; Garcia, Amaris J.; Mylvaganam, Ravi; Yoder, Jeffrey A.; Blackburn, Jessica S.; Sadreyev, Ruslan I.; Ceol, Craig J.; North, Trista E.; Langenau, David M.";;;;JOURNAL OF EXPERIMENTAL MEDICINE;MAY 30 2016;2016;213;6;;;;979;992;;10.1084/jem.20152013;;;21;4,2;0;0;0;0;0;0;1;8;6;6
Targeting vasculogenesis to prevent progression in multiple myeloma;"Moschetta, M.; Mishima, Y.; Kawano, Y.; Manier, S.; Paiva, B.; Palomera, L.; Aljawai, Y.; Calcinotto, A.; Unitt, C.; Sahin, I.; Sacco, A.; Glavey, S.; Shi, J.; Reagan, M. R.; Prosper, F.; Bellone, M.; Chesi, M.; Bergsagel, L. P.; Vacca, A.; Roccaro, A. M.; Ghobrial, I. M.";;;;LEUKEMIA;MAY 2016;2016;30;5;;;;1103;1115;;10.1038/leu.2016.3;;;21;4,2;0;0;0;0;0;0;3;6;5;4
Single cell mass cytometry reveals remodeling of human T cell phenotypes by varicella zoster virus;"Sen, Nandini; Mukherjee, Gourab; Arvin, Ann M.";;;;METHODS;NOV 15 2015;2015;90;;;;;85;94;;10.1016/j.ymeth.2015.07.008;;;21;3,5;0;0;0;0;0;1;4;7;6;2
Identification of Hypoxic Cells Using an Organotellurium Tag Compatible with Mass Cytometry;"Edgar, Landon J.; Vellanki, Ravi N.; Halupa, Adrienne; Hedley, David; Wouters, Bradly G.; Nitz, Mark";;;;ANGEWANDTE CHEMIE-INTERNATIONAL EDITION;OCT 20 2014;2014;53;43;;;;11473;11477;;10.1002/anie.201405233;;;21;3;0;0;0;0;0;1;5;7;2;5
Multiparametric Analysis of Screening Data: Growing Beyond the Single Dimension to Infinity and Beyond;"Abraham, Yann; Zhang, Xian; Parker, Christian N.";;;;JOURNAL OF BIOMOLECULAR SCREENING;JUN 2014;2014;19;5;;;SI;628;639;;10.1177/1087057114524987;;;21;3;0;0;0;0;1;2;6;7;1;3
CD56 Expression Marks Human Group 2 Innate Lymphoid Cell Divergence from a Shared NK Cell and Group 3 Innate Lymphoid Cell Developmental Pathway;"Chen, Luxi; Youssef, Youssef; Robinson, Cameron; Ernst, Gabrielle F.; Carson, Mary Y.; Young, Karen A.; Scoville, Steven D.; Zhang, Xiaoli; Harris, Regine; Sekhri, Palak; Mansour, Anthony G.; Chan, Wing K.; Nalin, Ansel P.; Mao, Hsiaoyin C.; Hughes, Tiffany; Mace, Emily M.; Pan, Yinghong; Rustagi, Navin; Chatterjee, Sujash S.; Gunaratne, Preethi H.; Behbehani, Gregory K.; Mundy-Bosse, Bethany L.; Caligiuri, Michael A.; Freud, Aharon G.";;;;IMMUNITY;SEP 18 2018;2018;49;3;;;;464;+;;10.1016/j.immuni.2018.08.010;;;20;6,67;0;0;0;0;0;0;0;0;0;11
Opposing Roles of Dendritic Cell Subsets in Experimental GN;"Brahler, Sebastian; Zinselmeyer, Bernd H.; Raju, Saravanan; Nitschke, Maximilian; Suleiman, Hani; Saunders, Brian T.; Johnson, Michael W.; Boehner, Alexander M. C.; Viehmann, Susanne F.; Theisen, Derek J.; Kretzer, Nicole M.; Briseno, Carlos G.; Zaitsev, Konstantin; Ornatsky, Olga; Chang, Qing; Carrero, Javier A.; Kopp, Jeffrey B.; Artyomov, Maxim N.; Kurts, Christian; Murphy, Kenneth M.; Miner, Jeffrey H.; Shaw, Andrey S.";;;;JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY;JAN 2018;2018;29;1;;;;138;154;;10.1681/ASN.2017030270;;;20;6,67;0;0;0;0;0;0;0;0;3;11
Mass Cytometry and Topological Data Analysis Reveal Immune Parameters Associated with Complications after Allogeneic Stem Cell Transplantation;"Lakshmikanth, Tadepally; Olin, Axel; Chen, Yang; Mikes, Jaromir; Fredlund, Erik; Remberger, Mats; Omazic, Brigitta; Brodin, Petter";;;;CELL REPORTS;AUG 29 2017;2017;20;9;;;;2238;2250;;10.1016/j.celrep.2017.08.021;;;20;5;0;0;0;0;0;0;0;1;8;6
Mass Cytometric Analysis of HIV Entry, Replication, and Remodeling in Tissue CD4(+) T Cells;"Cavrois, Marielle; Banerjee, Trambak; Mukherjee, Gourab; Raman, Nandhini; Hussien, Rajaa; Rodriguez, Brandon Aguilar; Vasquez, Joshua; Spitzer, Matthew H.; Lazarus, Nicole H.; Jones, Jennifer J.; Ochsenbauer, Christina; McCune, Joseph M.; Butcher, Eugene C.; Arvin, Ann M.; Sen, Nandini; Greene, Warner C.; Roan, Nadia R.";;;;CELL REPORTS;JUL 25 2017;2017;20;4;;;;984;998;;10.1016/j.celrep.2017.06.087;;;20;5;0;0;0;0;0;0;0;1;6;9
Highly Multiplexed Single-Cell In Situ Protein Analysis with Cleavable Fluorescent Antibodies;"Mondal, Manas; Liao, Renjie; Xiao, Lu; Eno, Taylor; Guo, Jia";;;;ANGEWANDTE CHEMIE-INTERNATIONAL EDITION;MAR 1 2017;2017;56;10;;;;2636;2639;;10.1002/anie.201611641;;;20;5;0;0;0;0;0;0;0;2;8;9
Distinct signaling programs control human hematopoietic stem cell survival and proliferation;"Knapp, David J. H. F.; Hammond, Colin A.; Aghaeepour, Nima; Miller, Paul H.; Pellacani, Davide; Beer, Philip A.; Sachs, Karen; Qiao, Wenlian; Wang, WeiJia; Humphries, R. Keith; Sauvageau, Guy; Zandstra, Peter W.; Bendall, Sean C.; Nolan, Garry P.; Hansen, Carl; Eaves, Connie J.";;;;BLOOD;JAN 19 2017;2017;129;3;;;;307;318;;10.1182/blood-2016-09-740654;;;20;5;0;0;0;0;0;0;0;6;7;5
Cell size assays for mass cytometry;"Stern, Alan D.; Rahman, Adeeb H.; Birtwistle, Marc R.";;;;CYTOMETRY PART A;JAN 2017;2017;91A;1;;;SI;14;24;;10.1002/cyto.a.23000;;;20;5;0;0;0;0;0;0;0;3;6;6
Biomarkers to guide clinical therapeutics in rheumatology?;"Robinson, William H.; Mao, Rong";;;;CURRENT OPINION IN RHEUMATOLOGY;MAR 2016;2016;28;2;;;;168;175;;10.1097/BOR.0000000000000250;;;20;4;0;0;0;0;0;0;1;7;3;7
Constraint-based Causal Discovery from Multiple Interventions over Overlapping Variable Sets;"Triantafillou, Sofia; Tsamardinos, Ioannis";;;;JOURNAL OF MACHINE LEARNING RESEARCH;NOV 2015;2015;16;;;;;2147;2205;;;;;20;3,33;0;0;0;0;0;0;3;6;7;3
Quantification of Surface Ligands on NaYF4 Nanoparticles by Three Independent Analytical Techniques;"Tong, Lemuel; Lu, Elsa; Pichaandi, Jothirmayanantham; Cao, Pengpeng; Nitz, Mark; Winnik, Mitchell A.";;;;CHEMISTRY OF MATERIALS;JUL 14 2015;2015;27;13;;;;4899;4910;;10.1021/acs.chemmater.5b02190;;;20;3,33;0;0;0;0;0;0;2;8;2;7
A Practical Guide to Multiplexed Mass Cytometry;"Zivanovic, Nevena; Jacobs, Andrea; Bodenmiller, Bernd";;;"Fienberg, HG; Nolan, GP";HIGH-DIMENSIONAL SINGLE CELL ANALYSIS: MASS CYTOMETRY, MULTI-PARAMETRIC FLOW CYTOMETRY AND BIOINFORMATIC TECHNIQUES;2014;2014;377;;;;;95;109;;10.1007/82_2013_335;;;20;2,86;0;0;0;0;1;3;3;2;5;4
Mass cytometry reveals innate lymphoid cell differentiation pathways in the human fetal intestine;"Li, Na; van Unen, Vincent; Hollt, Thomas; Thompson, Allan; van Bergen, Jeroen; Pezzotti, Nicola; Eisemann, Elmar; Vilanova, Anna; Lopes, Susana M. Chuva de Sousa; Lelieveldt, Boudewijn P. F.; Koning, Frits";;;;JOURNAL OF EXPERIMENTAL MEDICINE;MAY 2018;2018;215;5;;;;1383;1396;;10.1084/jem.20171934;;;19;6,33;0;0;0;0;0;0;0;0;3;13
Expression of LAG-3 defines exhaustion of intratumoral PD-1(+) T cells and correlates with poor outcome in follicular lymphoma;"Yang, Zhi-Zhang; Kim, Hyo Jin; Villasboas, Jose C.; Chen, Ya-Ping; Price-Troska, Tammy; Jalali, Shahrzad; Wilson, Mara; Novak, Anne J.; Ansell, Stephen M.";;;;ONCOTARGET;SEP 5 2017;2017;8;37;;;;61425;61439;;10.18632/oncotarget.18251;;;19;4,75;0;0;0;0;0;0;0;3;5;8
Mapping the Fetomaternal Peripheral Immune System at Term Pregnancy;"Fragiadakis, Gabriela K.; Baca, Quentin J.; Gherardini, Pier Federico; Ganio, Edward A.; Gaudilliere, Dyani K.; Tingle, Martha; Lancero, Hope L.; McNeil, Leslie S.; Spitzer, Matthew H.; Wong, Ronald J.; Shaw, Gary M.; Darmstadt, Gary L.; Sylvester, Karl G.; Winn, Virginia D.; Carvalho, Brendan; Lewis, David B.; Stevenson, David K.; Nolan, Garry P.; Aghaeepour, Nima; Angst, Martin S.; Gaudilliere, Brice L.";;;;JOURNAL OF IMMUNOLOGY;DEC 1 2016;2016;197;11;;;;4482;4492;;10.4049/jimmunol.1601195;;;19;3,8;0;0;0;0;0;0;0;6;3;8
Enhanced Multiplexing in Mass Cytometry Using Osmium and Ruthenium Tetroxide Species;"Catena, Raul; Ozcan, Alaz; Zivanovic, Nevena; Bodenmiller, Bernd";;;;CYTOMETRY PART A;MAY 2016;2016;89A;5;;;;491;497;;10.1002/cyto.a.22848;;;19;3,8;0;0;0;0;0;0;1;5;6;6
High-Dimensional Analysis of Acute Myeloid Leukemia Reveals Phenotypic Changes in Persistent Cells during Induction Therapy;"Ferrell, Paul Brent, Jr.; Diggins, Kirsten Elizabeth; Polikowsky, Hannah Grace; Mohan, Sanjay Ram; Seegmiller, Adam C.; Irish, Jonathan Michael";;;;PLOS ONE;APR 13 2016;2016;11;4;;;;;;e0153207;10.1371/journal.pone.0153207;;;19;3,8;0;0;0;0;0;0;0;3;6;9
Application of Mass Cytometry (CyTOF) for Functional and Phenotypic Analysis of Natural Killer Cells;"Kay, Alexander W.; Strauss-Albee, Dara M.; Blish, Catherine A.";;;Somanchi, SS;NATURAL KILLER CELLS: METHODS AND PROTOCOLS;2016;2016;1441;;;;;13;26;;10.1007/978-1-4939-3684-7_2;;;19;3,8;0;0;0;0;0;0;1;2;5;7
Cutting Edge: Redox Signaling Hypersensitivity Distinguishes Human Germinal Center B Cells;"Polikowsky, Hannah G.; Wogsland, Cara E.; Diggins, Kirsten E.; Huse, Kanutte; Irish, Jonathan M.";;;;JOURNAL OF IMMUNOLOGY;AUG 15 2015;2015;195;4;;;;1364;1367;;10.4049/jimmunol.1500904;;;19;3,17;0;0;0;0;0;0;6;3;2;6
PMMA Microspheres with Embedded Lanthanide Nanoparticles by Photoinitiated Dispersion Polymerization with a Carboxy-Functional Macro-RAFT Agent;"Tan, Jianbo; Zhao, Guangyao; Zeng, Zhaohua; Winnik, Mitchell A.";;;;MACROMOLECULES;JUN 9 2015;2015;48;11;;;;3629;3640;;10.1021/acs.macromol.5b00688;;;19;3,17;0;0;0;0;0;0;5;3;4;5
Enhanced flowType/RchyOptimyx: a Bioconductor pipeline for discovery in high-dimensional cytometry data;"O'Neill, Kieran; Jalali, Adrin; Aghaeepour, Nima; Hoos, Holger; Brinkman, Ryan R.";;;;BIOINFORMATICS;MAY 1 2014;2014;30;9;;;;1329;1330;;10.1093/bioinformatics/btt770;;;19;2,71;0;0;0;0;0;2;6;3;3;5
Flow cytometry in the post fluorescence era;Nolan, Garry R.;;;;BEST PRACTICE & RESEARCH CLINICAL HAEMATOLOGY;DEC 2011;2011;24;4;;;;505;508;;10.1016/j.beha.2011.09.005;;;19;1,9;0;0;3;3;1;3;3;3;0;2
GM-CSF and CXCR4 define a T helper cell signature in multiple sclerosis;"Galli, Edoardo; Hartmann, Felix J.; Schreiner, Bettina; Ingelfinger, Florian; Arvaniti, Eirini; Diebold, Martin; Mrdjen, Dunja; van der Meer, Franziska; Krieg, Carsten; Al Nimer, Faiez; Sanderson, Nicholas; Stadelmann, Christine; Khademi, Mohsen; Piehl, Fredrik; Claassen, Manfred; Derfuss, Tobias; Olsson, Tomas; Becher, Burkhard";;;;NATURE MEDICINE;AUG 2019;2019;25;8;;;;1290;+;;10.1038/s41591-019-0521-4;;;18;9;0;0;0;0;0;0;0;0;0;3
Distinct phenotype of CD4(+) T cells driving celiac disease identified in multiple autoimmune conditions;"Christophersen, Asbjorn; Lund, Eivind G.; Snir, Omri; Sola, Elsa; Kanduri, Chakravarthi; Dahal-Koirala, Shiva; Zuhlke, Stephanie; Molberg, Oyvind; Utz, Paul J.; Rohani-Pichavant, Mina; Simard, Julia F.; Dekker, Cornelia L.; Lundin, Knut E. A.; Sollid, Ludvig M.; Davis, Mark M.";;;;NATURE MEDICINE;MAY 2019;2019;25;5;;;;734;+;;10.1038/s41591-019-0403-9;;;18;9;0;0;0;0;0;0;0;0;0;8
CSF1R inhibitors exhibit antitumor activity in acute myeloid leukemia by blocking paracrine signals from support cells;"Edwards, David K., V; Watanabe-Smith, Kevin; Rofelty, Angela; Damnernsawad, Alisa; Laderas, Ted; Lamble, Adam; Lind, Evan F.; Kaempf, Andy; Mori, Motomi; Rosenberg, Mara; d'Almeida, Amanda; Long, Nicola; Agarwal, Anupriya; Sweeney, David Tyler; Loriaux, Marc; McWeeney, Shannon K.; Tyner, Jeffrey W.";;;;BLOOD;FEB 7 2019;2019;133;6;;;;588;599;;10.1182/blood-2018-03-838946;;;18;9;0;0;0;0;0;0;0;0;0;7
Immune activation underlies a sustained clinical response to Yttrium-90 radioembolisation in hepatocellular carcinoma;"Chew, Valerie; Lee, Yun Hua; Pan, Lu; Nasir, Nurul J. M.; Lim, Chun Jye; Chua, Camillus; Lai, Liyun; Hazirah, Sharifah Nur; Lim, Tony Kiat Hon; Goh, Brian K. P.; Chung, Alexander; Lo, Richard H. G.; Ng, David; Filarca, Rene L. F.; Albani, Salvatore; Chow, Pierce K. H.";;;;GUT;FEB 2019;2019;68;2;;;;335;346;;10.1136/gutjnl-2017-315485;;;18;9;0;0;0;0;0;0;0;0;1;9
Human Monocyte Heterogeneity as Revealed by High-Dimensional Mass Cytometry;"Hamers, Anouk A. J.; Dinh, Huy Q.; Thomas, Graham D.; Marcovecchio, Paola; Blatchley, Amy; Nakao, Catherine S.; Kim, Cheryl; McSkimming, Chantel; Taylor, Angela M.; Nguyen, Anh T.; McNamara, Coleen A.; Hedrick, Catherine C.";;;;ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY;JAN 2019;2019;39;1;;;;25;36;;10.1161/ATVBAHA.118.311022;;;18;9;0;0;0;0;0;0;0;0;0;14
Immune cell profiling in cancer: molecular approaches to cell-specific identification;"Lyons, Yasmin A.; Wu, Sherry Y.; Overwijk, Willem W.; Baggerly, Keith A.; Sood, Anil K.";;;;NPJ PRECISION ONCOLOGY;AUG 15 2017;2017;1;;;;;;;UNSP 26;10.1038/s41698-017-0031-0;;;18;4,5;0;0;0;0;0;0;0;1;5;12
Cytotoxicity of arsenic trioxide in single leukemia cells by time-resolved ICP-MS together with lanthanide tags;"Zhou, Ying; Li, Hongyan; Sun, Hongzhe";;;;CHEMICAL COMMUNICATIONS;MAR 11 2017;2017;53;20;;;;2970;2973;;10.1039/c7cc00143f;;;18;4,5;0;0;0;0;0;0;0;2;5;8
Single-cell measurement of the uptake, intratumoral distribution and cell cycle effects of cisplatin using mass cytometry;"Chang, Qing; Ornatsky, Olga I.; Koch, Cameron J.; Chaudary, Naz; Marie-Egyptienne, Delphine T.; Hill, Richard P.; Tanner, Scott D.; Hedley, David W.";;;;INTERNATIONAL JOURNAL OF CANCER;MAR 1 2015;2015;136;5;;;;1202;1209;;10.1002/ijc.29074;;;18;3;0;0;0;0;0;2;1;4;4;6
Microfluidic Platforms for Single-Cell Protein Analysis;"Liu, Yanli; Singh, Anup K.";;;;JALA;DEC 2013;2013;18;6;;;SI;446;454;;10.1177/2211068213494389;;;18;2,25;0;0;0;1;2;3;5;1;3;2
Higher throughput methods of identifying T cell epitopes for studying outcomes of altered antigen processing and presentation;Newell, Evan W.;;;;FRONTIERS IN IMMUNOLOGY;2013;2013;4;;;;;;;UNSP 430;10.3389/fimmu.2013.00430;;;18;2,25;0;0;0;0;0;5;4;2;4;2
Comprehensive innate immune profiling of chikungunya virus infection in pediatric cases;"Michlmayr, Daniela; Pak, Theodore R.; Rahman, Adeeb H.; Amir, El-Ad David; Kim, Eun-Young; Kim-Schulze, Seunghee; Suprun, Maria; Stewart, Michael G.; Thomas, Guajira P.; Balmaseda, Angel; Wang, Li; Zhu, Jun; Suarez-Farinas, Mayte; Wolinsky, Steven M.; Kasarskis, Andrew; Harris, Eva";;;;MOLECULAR SYSTEMS BIOLOGY;AUG 2018;2018;14;8;;;;;;e7862;10.15252/msb.20177862;;;17;5,67;0;0;0;0;0;0;0;0;0;10
Gating mass cytometry data by deep learning;"Li, Huamin; Shaham, Uri; Stanton, Kelly P.; Yao, Yi; Montgomery, Ruth R.; Kluger, Yuval";;;;BIOINFORMATICS;NOV 1 2017;2017;33;21;;;;3423;3430;;10.1093/bioinformatics/btx448;;;17;4,25;0;0;0;0;0;0;0;0;4;11
A microfluidic flow cytometer enabling absolute quantification of single-cell intracellular proteins;"Li, Xiufeng; Fan, Beiyuan; Cao, Shanshan; Chen, Deyong; Zhao, Xiaoting; Men, Dong; Yue, Wentao; Wang, Junbo; Chen, Jian";;;;LAB ON A CHIP;SEP 21 2017;2017;17;18;;;;3129;3137;;10.1039/c7lc00546f;;;17;4,25;0;0;0;0;0;0;0;0;6;7
Phenotyping the Immune Response to Trauma: A Multiparametric Systems Immunology Approach;"Seshadri, Anupamaa; Brat, Gabriel A.; Yorkgitis, Brian K.; Keegan, Joshua; Dolan, James; Salim, Ali; Askari, Reza; Lederer, James A.";;;;CRITICAL CARE MEDICINE;SEP 2017;2017;45;9;;;;1523;1530;;10.1097/CCM.0000000000002577;;;17;4,25;0;0;0;0;0;0;0;3;1;9
Mass cytometry identifies a distinct monocyte cytokine signature shared by clinically heterogeneous pediatric SLE patients;"O'Gorman, W. E.; Kong, D. S.; Balboni, I. M.; Rudra, P.; Bolen, C. R.; Ghosh, D.; Davis, M. M.; Nolan, G. P.; Hsieh, E. W. Y.";;;;JOURNAL OF AUTOIMMUNITY;JUL 2017;2017;81;;;;;74;89;;10.1016/j.jaut.2017.03.010;;;17;4,25;0;0;0;0;0;0;0;0;7;9
Evolution of MHC-based technologies used for detection of antigen-responsive T cells;"Bentzen, Amalie Kai; Hadrup, Sine Reker";;;;CANCER IMMUNOLOGY IMMUNOTHERAPY;MAY 2017;2017;66;5;;;;657;666;;10.1007/s00262-017-1971-5;;;17;4,25;0;0;0;0;0;0;0;4;5;6
MLN0128, a novel mTOR kinase inhibitor, disrupts survival signaling and triggers apoptosis in AML and AML stem/progenitor cells;"Zeng, Zhihong; Wang, Rui-Yu; Qiu, Yi Hua; Mak, Duncan H.; Coombes, Kevin; Yoo, Suk Young; Zhang, Qi; Jessen, Katti; Liu, Yi; Rommel, Christian; Fruman, David A.; Kantarjian, Hagop M.; Kornblau, Steven M.; Andreeff, Michael; Konopleva, Marina";;;;ONCOTARGET;AUG 23 2016;2016;7;34;;;;55083;55097;;10.18632/oncotarget.10397;;;17;3,4;0;0;0;0;0;0;0;8;4;3
Synthesis of Uniform NaLnF(4) (Ln: Sm to Ho) Nanoparticles for Mass Cytometry;"Tong, Lemuel; Lu, Elsa; Pichaandi, Jothirmayanantham; Zhao, Guangyao; Winnik, Mitchell A.";;;;JOURNAL OF PHYSICAL CHEMISTRY C;MAR 24 2016;2016;120;11;;;;6269;6280;;10.1021/acs.jpcc.6b00570;;;17;3,4;0;0;0;0;0;0;0;8;6;3
High-dimensional immune profiling of total and rotavirus VP6-specific intestinal and circulating B cells by mass cytometry;"Nair, N.; Newell, E. W.; Vollmers, C.; Quake, S. R.; Morton, J. M.; Davis, M. M.; He, X. S.; Greenberg, H. B.";;;;MUCOSAL IMMUNOLOGY;JAN 2016;2016;9;1;;;;68;82;;10.1038/mi.2015.36;;;17;3,4;0;0;0;0;0;0;2;5;5;2
Computational and experimental single cell biology techniques for the definition of cell type heterogeneity, interplay and intracellular dynamics;"Roditi, Laura de Vargas; Claassen, Manfred";;;;CURRENT OPINION IN BIOTECHNOLOGY;AUG 2015;2015;34;;;;;9;15;;10.1016/j.copbio.2014.10.010;;;17;2,83;0;0;0;0;0;3;5;3;4;0
Pushing the frontiers of T-cell vaccines: accurate measurement of human T-cell responses;"Saade, Fadi; Gorski, Stacey Ann; Petrovsky, Nikolai";;;;EXPERT REVIEW OF VACCINES;DEC 2012;2012;11;12;;;;1459;1470;;10.1586/ERV.12.125;;;17;1,89;0;0;0;0;1;4;1;3;5;2
Personalized vaccinology: A review;"Poland, G. A.; Ovsyannikova, I. G.; Kennedy, R. B.";;;;VACCINE;AUG 28 2018;2018;36;36;;;SI;5350;5357;;10.1016/j.vaccine.2017.07.062;26th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID);APR 09-12, 2016;16;5,33;0;0;0;0;0;0;0;0;5;8
Cytometry TOF identifies alveolar macrophage subtypes in acute respiratory distress syndrome;"Morrell, Eric D.; Wiedeman, Alice; Long, S. Alice; Gharib, Sina A.; West, T. Eoin; Skerrett, Shawn J.; Wurfel, Mark M.; Mikacenic, Carmen";;;;JCI INSIGHT;MAY 17 2018;2018;3;10;;;;;;e99281;10.1172/jci.insight.99281;;;16;5,33;0;0;0;0;0;0;0;0;1;12
Disruption of Wnt/beta-Catenin Exerts Antileukemia Activity and Synergizes with FLT3 Inhibition in FLT3-Mutant Acute Myeloid Leukemia;"Jiang, Xuejie; Mak, Po Yee; Mu, Hong; Tao, Wenjing; Mak, Duncan H.; Kornblau, Steven; Zhang, Qi; Ruvolo, Peter; Burks, Jared K.; Zhang, Weiguo; McQueen, Teresa; Pan, Rongqing; Zhou, Hongsheng; Konopleva, Marina; Cortes, Jorge; Liu, Qifa; Andreeff, Michael; Carter, Bing Z.";;;;CLINICAL CANCER RESEARCH;MAY 15 2018;2018;24;10;;;;2417;2429;;10.1158/1078-0432.CCR-17-1556;;;16;5,33;0;0;0;0;0;0;0;0;2;8
Anti-PD-1-induced high-grade hepatitis associated with corticosteroid-resistant T cells: a case report;"McGuire, Helen M.; Shklovskaya, Elena; Edwards, Jarem; Trevillian, Paul R.; McCaughan, Geoffrey W.; Bertolino, Patrick; McKenzie, Catriona; Gourlay, Ralph; Gallagher, Stuart J.; Fazekas de St Groth, Barbara; Hersey, Peter";;;;CANCER IMMUNOLOGY IMMUNOTHERAPY;APR 2018;2018;67;4;;;;563;573;;10.1007/s00262-017-2107-7;;;16;5,33;0;0;0;0;0;0;0;0;5;8
Systems Immunology: Learning the Rules of the Immune System;"Villani, Alexandra-Chloe; Sarkizova, Siranush; Hacohen, Nir";;;"Littman, DR; Yokoyama, WM";ANNUAL REVIEW OF IMMUNOLOGY, VOL 36;2018;2018;36;;;;;813;842;;10.1146/annurev-immunol-042617-053035;;;16;5,33;0;0;0;0;0;0;0;0;0;13
Multicenter Systems Analysis of Human Blood Reveals Immature Neutrophils in Males and During Pregnancy;"Blazkova, Jana; Gupta, Sarthak; Liu, Yudong; Gaudilliere, Brice; Ganio, Edward A.; Bolen, Christopher R.; Saar-Dover, Ron; Fragiadakis, Gabriela K.; Angst, Martin S.; Hasni, Sarfaraz; Aghaeepour, Nima; Stevenson, David; Baldwin, Nicole; Anguiano, Esperanza; Chaussabel, Damien; Altman, Matthew C.; Kaplan, Mariana J.; Davis, Mark M.; Furman, David";;;;JOURNAL OF IMMUNOLOGY;MAR 15 2017;2017;198;6;;;;2479;2488;;10.4049/jimmunol.1601855;;;16;4;0;0;0;0;0;0;0;1;2;10
Establishing High Dimensional Immune Signatures from Peripheral Blood via Mass Cytometry in a Discovery Cohort of Stage IV Melanoma Patients;"Wistuba-Hamprecht, Kilian; Martens, Alexander; Weide, Benjamin; Teng, Karen Wei Weng; Zelba, Henning; Guffart, Elena; Chen, Jinmiao; Garbe, Claus; Newell, Evan William; Larbi, Anis; Pawelec, Graham";;;;JOURNAL OF IMMUNOLOGY;JAN 15 2017;2017;198;2;;;;927;936;;10.4049/jimmunol.1600875;;;16;4;0;0;0;0;0;0;0;3;7;5
Silver nanoparticles for the detection of cell surface antigens in mass cytometry;"Schulz, Axel Ronald; Stanislawiak, Silke; Baumgart, Sabine; Gruetzkau, Andreas; Mei, Henrik E.";;;;CYTOMETRY PART A;JAN 2017;2017;91A;1;;;SI;25;33;;10.1002/cyto.a.22904;;;16;4;0;0;0;0;0;0;0;4;4;5
Small molecule inhibition of cAMP response element binding protein in human acute myeloid leukemia cells;"Mitton, B.; Chae, H-D; Hsu, K.; Dutta, R.; Aldana-Masangkay, G.; Ferrari, R.; Davis, K.; Tiu, B. C.; Kaul, A.; Lacayo, N.; Dahl, G.; Xie, F.; Li, B. X.; Breese, M. R.; Landaw, E. M.; Nolan, G.; Pellegrini, M.; Romanov, S.; Xiao, X.; Sakamoto, K. M.";;;;LEUKEMIA;DEC 2016;2016;30;12;;;;2302;2311;;10.1038/leu.2016.139;;;16;3,2;0;0;0;0;0;0;0;3;7;3
A Simple, Versatile Antibody-Based Barcoding Method for Flow Cytometry;"Akkaya, Billur; Miozzo, Pietro; Holstein, Amanda H.; Shevach, Ethan M.; Pierce, Susan K.; Akkaya, Munir";;;;JOURNAL OF IMMUNOLOGY;SEP 1 2016;2016;197;5;;;;2027;2038;;10.4049/jimmunol.1600727;;;16;3,2;0;0;0;0;0;0;1;4;5;3
Single-cell gene expression profiling and cell state dynamics: collecting data, correlating data points and connecting the dots;"Marr, Carsten; Zhou, Joseph X.; Huang, Sui";;;;CURRENT OPINION IN BIOTECHNOLOGY;JUN 2016;2016;39;;;;;207;214;;10.1016/j.copbio.2016.04.015;;;16;3,2;0;0;0;0;0;0;4;8;1;3
Single-Cell Genomics for Virology;"Ciuffi, Angela; Rato, Sylvie; Telenti, Amalio";;;;VIRUSES-BASEL;MAY 2016;2016;8;5;;;;;;123;10.3390/v8050123;;;16;3,2;0;0;0;0;0;0;0;7;7;1
Characterizing Phenotypes and Signaling Networks of Single Human Cells by Mass Cytometry;"Leelatian, Nalin; Diggins, Kirsten E.; Irish, Jonathan M.";;;"Singh, AK; Chandrasekaran, A";SINGLE CELL PROTEIN ANALYSIS: METHODS AND PROTOCOLS;2015;2015;1346;;;;;99;113;;10.1007/978-1-4939-2987-0_8;;;16;2,67;0;0;0;0;0;0;2;6;4;3
Antigen-Dependent Integration of Opposing Proximal TCR-Signaling Cascades Determines the Functional Fate of T Lymphocytes;"Wolchinsky, Ron; Hod-Marco, Moran; Oved, Kfir; Shen-Orr, Shai S.; Bendall, Sean C.; Nolan, Garry P.; Reiter, Yoram";;;;JOURNAL OF IMMUNOLOGY;MAR 1 2014;2014;192;5;;;;2109;2119;;10.4049/jimmunol.1301142;;;16;2,29;0;0;0;0;1;6;5;1;1;0
Development of mass cytometry methods for bacterial discrimination;"Leipold, Michael D.; Ornatsky, Olga; Baranov, Vladimir; Whitfield, Chris; Nitz, Mark";;;;ANALYTICAL BIOCHEMISTRY;DEC 1 2011;2011;419;1;;;;1;8;;10.1016/j.ab.2011.07.035;;;16;1,6;0;1;2;3;2;1;0;4;2;1
The synthesis and characterization of lanthanide-encoded poly(styrene-co-methacrylic acid) microspheres;"Liang, Yi; Abdelrahman, Ahmed I.; Baranov, Vladimir; Winnik, Mitchell A.";;;;POLYMER;OCT 13 2011;2011;52;22;;;;5040;5052;;10.1016/j.polymer.2011.08.056;;;16;1,6;0;0;1;2;2;1;1;1;3;3
Increased monocyte count as a cellular biomarker for poor outcomes in fibrotic diseases: a retrospective, multicentre cohort study;"Scott, Madeleine K. D.; Quinn, Katie; Li, Qin; Carroll, Robert; Warsinske, Hayley; Vallania, Francesco; Chen, Shirley; Carns, Mary A.; Aren, Kathleen; Sun, Jiehuan; Koloms, Kimberly; Lee, Jungwha; Baral, Jessika; Kropski, Jonathan; Zhao, Hongyu; Herzog, Erica; Martinez, Fernando J.; Moore, Bethany B.; Hinchcliff, Monique; Denny, Joshua; Kaminski, Naftali; Herazo-Maya, Jose D.; Shah, Nigam H.; Khatri, Purvesh";;;;LANCET RESPIRATORY MEDICINE;JUN 2019;2019;7;6;;;;497;508;;10.1016/S2213-2600(18)30508-3;;;15;7,5;0;0;0;0;0;0;0;0;0;9
High-Parameter Mass Cytometry Evaluation of Relapsed/Refractory Multiple Myeloma Patients Treated with Daratumumab Demonstrates Immune Modulation as a Novel Mechanism of Action;"Adams, Homer C., III; Stevenaert, Frederik; Krejcik, Jakub; Van der Borght, Koen; Smets, Tina; Bald, Jaime; Abraham, Yann; Ceulemans, Hugo; Chiu, Christopher; Vanhoof, Greet; Usmani, Saad Z.; Plesner, Torben; Lonial, Sagar; Nijhof, Inger; Lokhorst, Henk M.; Mutis, Tuna; van de Donk, Niels W. C. J.; Sasser, Amy Kate; Casneuf, Tineke";;;;CYTOMETRY PART A;MAR 2019;2019;95A;3;;;;279;289;;10.1002/cyto.a.23693;;;15;7,5;0;0;0;0;0;0;0;0;0;5
Macrophage Migration Inhibitory Factor Regulates U1 Small Nuclear RNP Immune Complex-Mediated Activation of the NLRP3 Inflammasome;"Shin, Min Sun; Kang, Youna; Wahl, Elizabeth R.; Park, Hong-Jai; Lazova, Rossitza; Leng, Lin; Mamula, Mark; Krishnaswamy, Smita; Bucala, Richard; Kang, Insoo";;;;ARTHRITIS & RHEUMATOLOGY;JAN 2019;2019;71;1;;;;109;120;;10.1002/art.40672;;;15;7,5;0;0;0;0;0;0;0;0;1;8
Comparison of CyTOF assays across sites: Results of a six-center pilot study;"Leipold, Michael D.; Obermoser, Gerlinde; Fenwick, Craig; Kleinstuber, Katja; Rashidi, Narges; McNevin, John P.; Nau, Allison N.; Wagar, Lisa E.; Rozot, Virginie; Davis, Mark M.; DeRosa, Stephen; Pantaleo, Giuseppe; Scriba, Thomas J.; Walker, Bruce D.; Olsen, Lars R.; Maecker, Holden T.";;;;JOURNAL OF IMMUNOLOGICAL METHODS;FEB 2018;2018;453;;;;SI;37;43;;10.1016/j.jim.2017.11.008;;;15;5;0;0;0;0;0;0;0;0;0;14
Cell Type of Origin Dictates the Route to Pluripotency;"Nefzger, Christian M.; Rossello, Fernando J.; Chen, Joseph; Liu, Xiaodong; Knaupp, Anja S.; Firas, Jaber; Paynter, Jacob M.; Pflueger, Jahnvi; Buckberry, Sam; Lim, Sue Mei; Williams, Brenda; Alaei, Sara; Faye-Chauhan, Keshav; Petretto, Enrico; Nilsson, Susan K.; Lister, Ryan; Ramialison, Mirana; Powell, David R.; Rackham, Owen J. L.; Polo, Jose M.";;;;CELL REPORTS;DEC 5 2017;2017;21;10;;;;2649;2660;;10.1016/j.celrep.2017.11.029;;;15;3,75;0;0;0;0;0;0;0;0;3;8
Beta cell heterogeneity: an evolving concept;"Avrahami, Dana; Klochendler, Agnes; Dor, Yuval; Glaser, Benjamin";;;;DIABETOLOGIA;AUG 2017;2017;60;8;;;;1363;1369;;10.1007/s00125-017-4326-z;;;15;3,75;0;0;0;0;0;0;0;1;8;6
Combining Flow and Mass Cytometry in the Search for Biomarkers in Chronic Graft-versus-Host Disease;"Stikvoort, Arwen; Chen, Yang; Radestad, Emelie; Torlen, Johan; Lakshmikanth, Tadepally; Bjorklund, Andreas; Mikes, Jaromir; Achour, Adnane; Gertow, Jens; Sundberg, Berit; Remberger, Mats; Sundin, Mikael; Mattsson, Jonas; Brodin, Petter; Uhlin, Michael";;;;FRONTIERS IN IMMUNOLOGY;JUN 19 2017;2017;8;;;;;;;717;10.3389/fimmu.2017.00717;;;15;3,75;0;0;0;0;0;0;0;1;3;7
Integral membrane proteins: bottom-up, top-down and structural proteomics;"Kar, Upendra K.; Simonian, Margaret; Whitelegge, Julian P.";;;;EXPERT REVIEW OF PROTEOMICS;2017;2017;14;8;;;;715;723;;10.1080/14789450.2017.1359545;;;15;3,75;0;0;0;0;0;0;0;0;5;6
Systems Approaches towards Molecular Profiling of Human Immunity;"Burel, Julie G.; Apte, Simon H.; Doolan, Denise L.";;;;TRENDS IN IMMUNOLOGY;JAN 2016;2016;37;1;;;;53;67;;10.1016/j.it.2015.11.006;;;15;3;0;0;0;0;0;0;2;5;3;5
Organotellurium scaffolds for mass cytometry reagent development;"Park, Hanuel; Edgar, Landon J.; Lumba, Matthew A.; Willis, Lisa M.; Nitz, Mark";;;;ORGANIC & BIOMOLECULAR CHEMISTRY;2015;2015;13;25;;;;7027;7033;;10.1039/c5ob00593k;;;15;2,5;0;0;0;0;0;0;2;2;4;5
A High-Sensitivity Lanthanide Nanoparticle Reporter for Mass Cytometry: Tests on Microgels as a Proxy for Cells;"Lin, Wanjuan; Hou, Yi; Lu, Yijie; Abdelrahman, Ahmed I.; Cao, Pengpeng; Zhao, Guangyao; Tong, Lemuel; Qian, Jieshu; Baranov, Vladimir; Nitz, Mark; Winnik, Mitchell A.";;;;LANGMUIR;MAR 25 2014;2014;30;11;;;;3142;3153;;10.1021/la403627p;;;15;2,14;0;0;0;0;0;2;5;7;1;0
Emerging applications of flow cytometry in solid tumor biology;"Chang, Qing; Hedley, David";;;;METHODS;JUL 2012;2012;57;3;;;;359;367;;10.1016/j.ymeth.2012.03.027;;;15;1,67;0;0;1;2;0;2;2;3;2;2
Deciphering myeloid-derived suppressor cells: isolation and markers in humans, mice and non-human primates;"Cassetta, Luca; Baekkevold, Espen S.; Brandau, Sven; Bujko, Anna; Cassatella, Marco A.; Dorhoi, Anca; Krieg, Carsten; Lin, Ang; Lore, Karin; Marini, Olivia; Pollard, Jeffrey W.; Roussel, Mikael; Scapini, Patrizia; Umansky, Viktor; Adema, Gosse J.";;;;CANCER IMMUNOLOGY IMMUNOTHERAPY;APR 2019;2019;68;4;;;;687;697;;10.1007/s00262-019-02302-2;;;14;7;0;0;0;0;0;0;0;0;0;7
A Pilot Trial of the Combination of Transgenic NY-ESO-1-reactive Adoptive Cellular Therapy with Dendritic Cell Vaccination with or without Ipilimumab;"Nowicki, Theodore S.; Berent-Maoz, Beata; Cheung-Lau, Gardenia; Huang, Rong Rong; Wang, Xiaoyan; Tsoi, Jennifer; Kaplan-Lefko, Paula; Cabrera, Paula; Tran, Justin; Pang, Jia; Macabali, Mignonette; Garcilazo, Ivan Perez; Carretero, Ignacio Baselga; Kalbasi, Anusha; Cochran, Alistair J.; Grasso, Catherine S.; Hu-Lieskovan, Siwen; Chmielowski, Bartosz; Comin-Anduix, Begona; Singh, Arun; Ribas, Antoni";;;;CLINICAL CANCER RESEARCH;APR 1 2019;2019;25;7;;;;2096;2108;;10.1158/1078-0432.CCR-18-3496;;;14;7;0;0;0;0;0;0;0;0;0;8
Global immune fingerprinting in glioblastoma patient peripheral blood reveals immune-suppression signatures associated with prognosis;"Alban, Tyler J.; Alvarado, Alvaro G.; Sorensen, Mia D.; Bayik, Defne; Volovetz, Josephine; Serbinowski, Emily; Mulkearns-Hubert, Erin E.; Sinyuk, Maksim; Hale, James S.; Onzi, Giovana R.; McGraw, Mary; Huang, Pengjing; Grabowski, Matthew M.; Wathen, Connor A.; Ahluwalia, Manmeet S.; Radivoyevitch, Tomas; Kornblum, Harley, I; Kristensen, Bjarne W.; Vogelbaum, Michael A.; Lathia, Justin D.";;;;JCI INSIGHT;NOV 2 2018;2018;3;21;;;;;;e122264;10.1172/jci.insight.122264;;;14;4,67;0;0;0;0;0;0;0;0;0;6
Mixed-effects association of single cells identifies an expanded effector CD4(+) T cell subset in rheumatoid arthritis;"Fonseka, Chamith Y.; Rao, Deepak A.; Teslovich, Nikola C.; Korsunsky, Ilya; Hannes, Susan K.; Slowikowski, Kamil; Gurish, Michael F.; Donlin, Laura T.; Lederer, James A.; Weinblatt, Michael E.; Massarotti, Elena M.; Coblyn, Jonathan S.; Helfgott, Simon M.; Todd, Derrick J.; Bykerk, Vivian P.; Karlson, Elizabeth W.; Ermann, Joerg; Lee, Yvonne C.; Brenner, Michael B.; Raychaudhuri, Soumya";;;;SCIENCE TRANSLATIONAL MEDICINE;OCT 17 2018;2018;10;463;;;;;;eaaq0305;10.1126/scitranslmed.aaq0305;;;14;4,67;0;0;0;0;0;0;0;0;0;13
Spatiotemporal segregation of human marginal zone and memory B cell populations in lymphoid tissue;"Zhao, Yuan; Uduman, Mohamed; Siu, Jacqueline H. Y.; Tull, Thomas J.; Sanderson, Jeremy D.; Wu, Yu-Chang Bryan; Zhou, Julian Q.; Petrov, Nedyalko; Ellis, Richard; Todd, Katrina; Chavele, Konstantia-Maria; Guesdon, William; Vossenkamper, Anna; Jassem, Wayel; D'Cruz, David P.; Fear, David J.; John, Susan; Scheel-Toellner, Dagmar; Hopkins, Claire; Moreno, Estefania; Woodman, Natalie L.; Ciccarelli, Francesca; Heck, Susanne; Kleinstein, Steven H.; Bemark, Mats; Spencer, Jo";;;;NATURE COMMUNICATIONS;SEP 21 2018;2018;9;;;;;;;3857;10.1038/s41467-018-06089-1;;;14;4,67;0;0;0;0;0;0;0;0;0;6
Melanoma Immunotherapy: Next-Generation Biomarkers;"Hogan, Sabrina A.; Levesque, Mitchell P.; Cheng, Phil F.";;;;FRONTIERS IN ONCOLOGY;MAY 29 2018;2018;8;;;;;;;178;10.3389/fonc.2018.00178;;;14;4,67;0;0;0;0;0;0;0;0;1;10
Diversification of human NK cells: Lessons from deep profiling;"Wilk, Aaron J.; Blish, Catherine A.";;;;JOURNAL OF LEUKOCYTE BIOLOGY;APR 2018;2018;103;4;;;;629;641;;10.1002/JLB.6RI0917-390R;;;14;4,67;0;0;0;0;0;0;0;0;3;6
Atomic mass tag of bismuth-209 for increasing the immunoassay multiplexing capacity of mass cytometry;"Han, Guojun; Chen, Shih-Yu; Gonzalez, Veronica D.; Zunder, Eli R.; Fantl, Wendy J.; Nolan, Garry P.";;;;CYTOMETRY PART A;DEC 2017;2017;91A;12;;;;1150;1163;;10.1002/cyto.a.23283;;;14;3,5;0;0;0;0;0;0;0;0;3;6
Rapid monoisotopic cisplatin based barcoding for multiplexed mass cytometry;"McCarthy, Ryan L.; Mak, Duncan H.; Burks, Jared K.; Barton, Michelle C.";;;;SCIENTIFIC REPORTS;JUN 19 2017;2017;7;;;;;;;3779;10.1038/s41598-017-03610-2;;;14;3,5;0;0;0;0;0;0;0;1;7;3
SPADEVizR: an R package for visualization, analysis and integration of SPADE results;"Gautreau, Guillaume; Pejoski, David; Le Grand, Roger; Cosma, Antonio; Beignon, Anne-Sophie; Tchitchek, Nicolas";;;;BIOINFORMATICS;MAR 1 2017;2017;33;5;;;;779;781;;10.1093/bioinformatics/btw708;;;14;3,5;0;0;0;0;0;0;0;0;6;6
Dasatinib Changes Immune Cell Profiles Concomitant with Reduced Tumor Growth in Several Murine Solid Tumor Models;"Hekim, Can; Ilander, Mette; Yan, Jun; Michaud, Erin; Smykla, Richard; Vaha-Koskela, Markus; Savola, Paula; Tahtinen, Siri; Saikko, Leena; Hemminki, Akseli; Kovanen, Panu E.; Porkka, Kimmo; Lee, Francis Y. F.; Mustjoki, Satu";;;;CANCER IMMUNOLOGY RESEARCH;FEB 2017;2017;5;2;;;;157;169;;10.1158/2326-6066.CIR-16-0061-T;;;14;3,5;0;0;0;0;0;0;0;2;6;6
Mass Cytometry Analytical Approaches Reveal Cytokine-Induced Changes in Natural Killer Cells;"Vendrame, Elena; Fukuyama, Julia; Strauss-Albee, Dara M.; Holmes, Susan; Blish, Catherine A.";;;;CYTOMETRY PART B-CLINICAL CYTOMETRY;JAN 2017;2017;92;1;;;SI;57;67;;10.1002/cyto.b.21500;;;14;3,5;0;0;0;0;0;0;0;4;5;3
Evidence Implicating Immunological Host Effects in the Efficacy of Metronomic Low-Dose Chemotherapy;"Shaked, Yuval; Pham, Elizabeth; Hariharan, Santosh; Magidey, Ksenia; Beyar-Katz, Ofrat; Xu, Ping; Man, Shan; Wu, Florence T. H.; Miller, Valeria; Andrews, David; Kerbel, Robert S.";;;;CANCER RESEARCH;OCT 2016;2016;76;20;;;;5983;5993;;10.1158/0008-5472.CAN-16-0136;;;14;2,8;0;0;0;0;0;0;0;4;1;7
Synthesis and Mass Cytometric Analysis of Lanthanide-Encoded Polyelectrolyte Microgels;"Lin, Wanjuan; Ma, Xiaomei; Qian, Jieshu; Abdelrahman, Ahmed I.; Halupa, Adrienne; Baranov, Vladimir; Pich, Andrij; Winnik, Mitchell A.";;;;LANGMUIR;JUN 7 2011;2011;27;11;;;;7265;7275;;10.1021/la201013v;;;14;1,4;0;0;2;5;2;0;2;2;0;1
Visualizing structure and transitions in high-dimensional biological data;"Moon, Kevin R.; van Dijk, David; Wang, Zheng; Gigante, Scott; Burkhardt, Daniel B.; Chen, William S.; Yim, Kristina; van den Elzen, Antonia; Hirn, Matthew J.; Coifman, Ronald R.; Ivanova, Natalia B.; Wolf, Guy; Krishnaswamy, Smita";;;;NATURE BIOTECHNOLOGY;DEC 2019;2019;37;12;;;;1482;+;;10.1038/s41587-019-0336-3;;;13;6,5;0;0;0;0;0;0;0;0;0;2
Single-cell transcriptional profiling: a window into embryonic cell-type specification;"Pijuan-Sala, Blanca; Guibentif, Carolina; Goettgens, Berthold";;;;NATURE REVIEWS MOLECULAR CELL BIOLOGY;JUN 2018;2018;19;6;;;;399;412;;10.1038/s41580-018-0002-5;;;13;4,33;0;0;0;0;0;0;0;0;1;9
Multiplex protein detection on circulating tumor cells from liquid biopsies using imaging mass cytometry;"Gerdtsson, Erik; Pore, Milind; Thiele, Jana-Aletta; Gerdtsson, Anna Sandstrom; Malihi, Paymaneh D.; Nevarez, Rafael; Kolatkar, Anand; Velasco, Carmen Ruiz; Wix, Sophia; Singh, Mohan; Carlsson, Anders; Zurita, Amado J.; Logothetis, Christopher; Merchant, Akil A.; Hicks, James; Kuhn, Peter";;;;CONVERGENT SCIENCE PHYSICAL ONCOLOGY;MAR 2018;2018;4;1;;;;;;UNSP 015002;10.1088/2057-1739/aaa013;;;13;4,33;0;0;0;0;0;0;0;0;4;6
Food allergy and omics;"Dhondalay, Gopal Krishna; Rael, Efren; Acharya, Swati; Zhang, Wenming; Sampath, Vanitha; Galli, Stephen J.; Tibshirani, Robert; Boyd, Scott D.; Maecker, Holden; Nadeau, Kari Christine; Andorf, Sandra";;;;JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY;JAN 2018;2018;141;1;;;;20;29;;10.1016/j.jaci.2017.11.007;;;13;4,33;0;0;0;0;0;0;0;0;3;7
Generation of Induced Progenitor-like Cells from Mature Epithelial Cells Using Interrupted Reprogramming;"Guo, Li; Karoubi, Golnaz; Duchesneau, Pascal; Shutova, Maria V.; Sung, Hoon-Ki; Tonge, Peter; Bear, Christine; Rogers, Ian; Nagy, Andras; Waddell, Thomas K.";;;;STEM CELL REPORTS;DEC 2017;2017;9;6;;;;1780;1795;;10.1016/j.stemcr.2017.10.022;;;13;3,25;0;0;0;0;0;0;0;0;3;9
Lanthanide-Coordinated Semiconducting Polymer Dots Used for Flow Cytometry and Mass Cytometry;"Wu, Xu; DeGottardi, Quinn; Wu, I-Che; Yu, Jiangbo; Wu, Li; Ye, Fangmao; Kuo, Chun-Ting; Kwok, William W.; Chiu, Daniel T.";;;;ANGEWANDTE CHEMIE-INTERNATIONAL EDITION;NOV 20 2017;2017;56;47;;;;14908;14912;;10.1002/anie.201708463;;;13;3,25;0;0;0;0;0;0;0;0;3;6
beta -Cells are not uniform after allNovel insights into molecular heterogeneity of insulin-secreting cells;"Avrahami, Dana; Wang, Yue J.; Klochendler, Agnes; Dor, Yuval; Glaser, Benjamin; Kaestner, Klaus H.";;;;DIABETES OBESITY & METABOLISM;SEP 2017;2017;19;;;1;;147;152;;10.1111/dom.13019;;;13;3,25;0;0;0;0;0;0;0;1;6;6
Single cell immune profiling by mass cytometry of newly diagnosed chronic phase chronic myeloid leukemia treated with nilotinib;"Gullaksen, Stein-Erik; Skavland, Jorn; Gavasso, Sonia; Tosevski, Vinko; Warzocha, Krzysztof; Dumrese, Claudia; Ferrant, Augustin; Gedde-Dahl, Tobias; Hellmann, Andrzej; Janssen, Jeroen; Labar, Boris; Lang, Alois; Majeed, Waleed; Mihaylov, Georgi; Stentoft, Jesper; Stenke, Leif; Thaler, Josef; Thielen, Noortje; Verhoef, Gregor; Voglova, Jaroslava; Ossenkoppele, Gert; Hochhaus, Andreas; Hjorth-Hansen, Henrik; Mustjoki, Satu; Sopper, Sieghart; Giles, Francis; Porkka, Kimmo; Wolf, Dominik; Gjertsen, Bjorn Tore";;;;HAEMATOLOGICA;AUG 2017;2017;102;8;;;;1361;1367;;10.3324/haematol.2017.167080;;;13;3,25;0;0;0;0;0;0;0;2;3;4
3D Culture as a Clinically Relevant Model for Personalized Medicine;"Fong, Eliza Li Shan; Toh, Tan Boon; Yu, Hanry; Chow, Edward Kai-Hua";;;;SLAS TECHNOLOGY;JUN 2017;2017;22;3;;;;245;253;;10.1177/2472630317697251;;;13;3,25;0;0;0;0;0;0;0;2;6;3
Influence of node abundance on signaling network state and dynamics analyzed by mass cytometry;"Lun, Xiao-Kang; Zanotelli, Vito R. T.; Wade, James D.; Schapiro, Denis; Tognetti, Marco; Dobberstein, Nadine; Bodenmiller, Bernd";;;;NATURE BIOTECHNOLOGY;FEB 2017;2017;35;2;;;;164;172;;10.1038/nbt.3770;;;13;3,25;0;0;0;0;0;0;0;0;5;6
Systems immune monitoring in cancer therapy;"Greenplate, Allison R.; Johnson, Douglas B.; Ferrell, P. Brent, Jr.; Irish, Jonathan M.";;;;EUROPEAN JOURNAL OF CANCER;JUL 2016;2016;61;;;;;77;84;;10.1016/j.ejca.2016.03.085;;;13;2,6;0;0;0;0;0;0;0;6;5;2
Processing, visualising and reconstructing network models from single-cell data;"Woodhouse, Steven; Moignard, Victoria; Goettgens, Berthold; Fisher, Jasmin";;;;IMMUNOLOGY AND CELL BIOLOGY;MAR 2016;2016;94;3;;;;256;265;;10.1038/icb.2015.102;;;13;2,6;0;0;0;0;0;0;5;6;1;1
Increased lymphocyte apoptosis in mouse models of colitis upon ABT-737 treatment is dependent upon BIM expression;"Lutz, C.; Mozaffari, M.; Tosevski, V.; Caj, M.; Cippa, P.; McRae, B. L.; Graff, C. L.; Rogler, G.; Fried, M.; Hausmann, M.";;;;CLINICAL AND EXPERIMENTAL IMMUNOLOGY;AUG 2015;2015;181;2;;;;343;356;;10.1111/cei.12635;;;13;2,17;0;0;0;0;0;0;2;5;4;2
Symmetric Poly( styrene)- block- poly( butadiene- stat- styrene)- blockpoly( styrene) Copolymer Prepared in a Non- Stop One- Pot RAFT Polymerization in Miniemulsion;"Froimowicz, Pablo; van Heukelum, Bernd; Scholten, Christoph; Greiner, Katja; Araujo, Odair; Landfester, Katharina";;;;JOURNAL OF POLYMER SCIENCE PART A-POLYMER CHEMISTRY;APR 1 2014;2014;52;7;;;;883;889;;10.1002/pola.27084;;;13;1,86;0;0;0;0;1;3;2;2;2;3
Dual-Purpose Polymer Labels for Fluorescent and Mass Cytometric Affinity Bioassays;"Majonis, Daniel; Ornatsky, Olga; Weinrich, Dirk; Winnik, Mitchell A.";;;;BIOMACROMOLECULES;MAY 2013;2013;14;5;;;;1503;1513;;10.1021/bm4001662;;;13;1,63;0;0;0;0;1;2;2;4;3;1
Integrated Inference and Analysis of Regulatory Networks from Multi-Level Measurements;"Poultney, Christopher S.; Greenfield, Alex; Bonneau, Richard";;;"Asthagiri, AR; Arkin, AP";COMPUTATIONAL METHODS IN CELL BIOLOGY;2012;2012;110;;;;;19;56;;10.1016/B978-0-12-388403-9.00002-3;;;13;1,44;0;0;0;0;3;5;3;1;1;0
Myeloid-Derived Suppressor Cells: Not Only in Tumor Immunity;"Pawelec, Graham; Verschoor, Chris P.; Ostrand-Rosenberg, Suzanne";;;;FRONTIERS IN IMMUNOLOGY;MAY 15 2019;2019;10;;;;;;;1099;10.3389/fimmu.2019.01099;;;12;6;0;0;0;0;0;0;0;0;0;2
Single-Cell Proteomics Reveal that Quantitative Changes in Co-expressed Lineage-Specific Transcription Factors Determine Cell Fate;"Palii, Carmen G.; Cheng, Qian; Gillespie, Mark A.; Shannon, Paul; Mazurczyk, Michalina; Napolitani, Giorgio; Price, Nathan D.; Ranish, Jeffrey A.; Morrissey, Edward; Higgs, Douglas R.; Brand, Marjorie";;;;CELL STEM CELL;MAY 2 2019;2019;24;5;;;;812;+;;10.1016/j.stem.2019.02.006;;;12;6;0;0;0;0;0;0;0;0;0;7
Multifactorial heterogeneity of virus-specific T cells and association with the progression of human chronic hepatitis B infection;"Cheng, Yang; Zhu, Yuan O.; Becht, Etienne; Aw, Pauline; Chen, Jinmiao; Poidinger, Michael; de Sessions, Paola Florez; Hibberd, Martin Lloyd; Bertoletti, Antonio; Lim, Seng Gee; Newell, Evan W.";;;;SCIENCE IMMUNOLOGY;FEB 2019;2019;4;32;;;;;;eaau6905;10.1126/sciimmunol.aau6905;;;12;6;0;0;0;0;0;0;0;0;0;8
Human Lymph Nodes Maintain TCF-1(hi) Memory T Cells with High Functional Potential and Clonal Diversity throughout Life;"Miron, Michelle; Kumar, Brahma V.; Meng, Wenzhao; Granot, Tomer; Carpenter, Dustin J.; Senda, Takashi; Chen, Dora; Rosenfeld, Aaron M.; Zhang, Bochao; Lerner, Harvey; Friedman, Amy L.; Hershberg, Uri; Shen, Yufeng; Rahman, Adeeb; Prak, Eline T. Luning; Farber, Donna L.";;;;JOURNAL OF IMMUNOLOGY;OCT 1 2018;2018;201;7;;;;2132;2140;;10.4049/jimmunol.1800716;;;12;4;0;0;0;0;0;0;0;0;1;8
Mass Cytometry for the Assessment of immune Reconstitution After Hematopoietic Stem Cell Transplantation;"Stern, Lauren; McGuire, Helen; Avdic, Selmir; Rizzetto, Simone; de St Groth, Barbara Fazekas; Luciani, Fabio; Slobedman, Barry; Blyth, Emily";;;;FRONTIERS IN IMMUNOLOGY;JUL 26 2018;2018;9;;;;;;;1672;10.3389/fimmu.2018.01672;;;12;4;0;0;0;0;0;0;0;0;0;8
CD161 Defines a Functionally Distinct Subset of Pro-Inflammatory Natural Killer Cells;"Kurioka, Ayako; Cosgrove, Cormac; Simoni, Yannick; van Wilgenburg, Bonnie; Geremia, Alessandra; Bjoerkander, Sophia; Sverremark-Ekstrom, Eva; Thurnheer, Christine; Guenthard, Huldrych F.; Khanna, Nina; Walker, Lucy Jane; Arancibia-Carcamo, Carolina V.; Newell, Evan W.; Willberg, Christian B.; Klenerman, Paul";"Swiss HIV Cohort Study; Oxford IBD Cohort Investigators";;;FRONTIERS IN IMMUNOLOGY;APR 9 2018;2018;9;;;;;;;486;10.3389/fimmu.2018.00486;;;12;4;0;0;0;0;0;0;0;0;1;7
The receptor repertoire and functional profile of follicular T cells in HIV-infected lymph nodes;"Wendel, Ben S.; del Alcazar, Daniel; He, Chenfeng; Del Rio-Estrada, Perla M.; Aiamkitsumrit, Benjamas; Ablanedo-Terrazas, Yuria; Hernandez, Stefany M.; Ma, Ke-Yue; Betts, Michael R.; Pulido, Laura; Huang, Jun; Gimotty, Phyllis A.; Reyes-Teran, Gustavo; Jiang, Ning; Su, Laura F.";;;;SCIENCE IMMUNOLOGY;APR 2018;2018;3;22;;;;;;eaan8884;10.1126/sciimmunol.aan8884;;;12;4;0;0;0;0;0;0;0;0;3;6
Advances in Proteomic Techniques for Cytokine Analysis: Focus on Melanoma Research;"Skalnikova, Helena Kupcova; Cizkova, Jana; Cervenka, Jakub; Vodicka, Petr";;;;INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES;DEC 2017;2017;18;12;;;;;;2697;10.3390/ijms18122697;;;12;3;0;0;0;0;0;0;0;0;4;3
Interferon Gamma induces changes in Natural Killer (NK)Cell Ligand Expression and Alter NK Cell-Mediated and Alters NK Cell-Mediated Lysis of pediatric Cancer Cell Lines;"Aquino-Lopez, Arianexys; Senyukov, Vladimir V.; Vlasic, Zlatko; Kleinerman, Eugenie S.; Lee, Dean A.";;;;FRONTIERS IN IMMUNOLOGY;APR 6 2017;2017;8;;;;;;;391;10.3389/fimmu.2017.00391;;;12;3;0;0;0;0;0;0;0;0;4;6
Systematic evaluation of immune regulation and modulation;"Stroncek, David F.; Butterfield, Lisa H.; Cannarile, Michael A.; Dhodapkar, Madhav V.; Greten, Tim F.; Grivel, Jean Charles; Kaufman, David R.; Kong, Heidi H.; Korangy, Firouzeh; Lee, Peter P.; Marincola, Francesco; Rutella, Sergio; Siebert, Janet C.; Trinchieri, Giorgio; Seliger, Barbara";;;;JOURNAL FOR IMMUNOTHERAPY OF CANCER;MAR 21 2017;2017;5;;;;;;;21;10.1186/s40425-017-0223-8;;;12;3;0;0;0;0;0;0;0;1;4;5
Toward deterministic and semiautomated SPADE analysis;Qiu, Peng;;;;CYTOMETRY PART A;MAR 2017;2017;91A;3;;;;281;289;;10.1002/cyto.a.23068;;;12;3;0;0;0;0;0;0;0;1;4;3
OMIP-034: Comprehensive immune phenotyping of human peripheral leukocytes by mass cytometry for monitoring immunomodulatory therapies;"Baumgart, Sabine; Peddinghaus, Anette; Schulte-Wrede, Ursula; Mei, Henrik E.; Gruetzkau, Andreas";;;;CYTOMETRY PART A;JAN 2017;2017;91A;1;;;SI;34;38;;10.1002/cyto.a.22894;;;12;3;0;0;0;0;0;0;0;4;3;5
Optimization of mass cytometry sample cryopreservation after staining;"Sumatoh, Hermi R.; Teng, Karen Wei Weng; Cheng, Yang; Newell, Evan W.";;;;CYTOMETRY PART A;JAN 2017;2017;91A;1;;;SI;48;61;;10.1002/cyto.a.23014;;;12;3;0;0;0;0;0;0;0;2;4;6
Identification of Novel CD4(+) T Cell Subsets in the Target Tissue of Sjogren's Syndrome and Their Differential Regulation by the Lymphotoxin/LIGHT Signaling Axis;"Haskett, Scott; Ding, Jian; Zhang, Wei; Thai, Alice; Cullen, Patrick; Xu, Shanqin; Petersen, Britta; Kuznetsov, Galina; Jandreski, Luke; Hamann, Stefan; Reynolds, Taylor L.; Allaire, Norm; Zheng, Timothy S.; Mingueneau, Michael";;;;JOURNAL OF IMMUNOLOGY;NOV 15 2016;2016;197;10;;;;3806;3819;;10.4049/jimmunol.1600407;;;12;2,4;0;0;0;0;0;0;0;4;6;2
Impaired coordination between signaling pathways is revealed in human colorectal cancer using single-cell mass cytometry of archival tissue blocks;"Simmons, Alan J.; Scurrah, Cherie R.; McKinley, Eliot T.; Herring, Charles A.; Irish, Jonathan M.; Washington, M. Kay; Coffey, Robert J.; Lau, Ken S.";;;;SCIENCE SIGNALING;OCT 11 2016;2016;9;449;;;;;;rs11;10.1126/scisignal.aah4413;;;12;2,4;0;0;0;0;0;0;0;2;6;2
Isotopologous Organotellurium Probes Reveal Dynamic Hypoxia In Vivo with Cellular Resolution;"Edgar, Landon J.; Vellanki, Ravi N.; Mckee, Trevor D.; Hedley, David; Wouters, Bradly G.; Nitz, Mark";;;;ANGEWANDTE CHEMIE-INTERNATIONAL EDITION;OCT 10 2016;2016;55;42;;;;13159;13163;;10.1002/anie.201607483;;;12;2,4;0;0;0;0;0;0;0;3;3;6
Identification of Vaccine-Altered Circulating B Cell Phenotypes Using Mass Cytometry and a Two-Step Clustering Analysis;"Pejoski, David; Tchitchek, Nicolas; Pozo, Andre Rodriguez; Elhmouzi-Younes, Jamila; Yousfi-Bogniaho, Rahima; Rogez-Kreuz, Christine; Clayette, Pascal; Dereuddre-Bosquet, Nathalie; Levy, Yves; Cosma, Antonio; Le Grand, Roger; Beignon, Anne-Sophie";;;;JOURNAL OF IMMUNOLOGY;JUN 1 2016;2016;196;11;;;;4814;4831;;10.4049/jimmunol.1502005;;;12;2,4;0;0;0;0;0;0;1;3;4;3
Impact of recent innovations in the use of mass cytometry in support of drug development;"Nassar, Ala F.; Ogura, Hideki; Wisnewski, Adam V.";;;;DRUG DISCOVERY TODAY;OCT 2015;2015;20;10;;;;1169;1175;;10.1016/j.drudis.2015.06.001;;;12;2;0;0;0;0;0;0;3;1;4;3
Detecting Antigen-Specific T Cell Responses: From Bulk Populations to Single Cells;"Phetsouphanh, Chansavath; Zaunders, John James; Kelleher, Anthony Dominic";;;;INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES;AUG 2015;2015;16;8;;;;18878;18893;;10.3390/ijms160818878;;;12;2;0;0;0;0;0;0;0;1;5;5
Reversibility of Defective Hematopoiesis Caused by Telomere Shortening in Telomerase Knockout Mice;"Raval, Aparna; Behbehani, Gregory K.; Le Xuan Truong Nguyen; Thomas, Daniel; Kusler, Brenda; Garbuzov, Alina; Ramunas, John; Holbrook, Colin; Park, Christopher Y.; Blau, Helen; Nolan, Garry P.; Artandi, Steven E.; Mitchell, Beverly S.";;;;PLOS ONE;JUL 2 2015;2015;10;7;;;;;;e0131722;10.1371/journal.pone.0131722;;;12;2;0;0;0;0;0;0;2;1;5;1
Systems Biology and immune aging;"O'Connor, Jose-Enrique; Herrera, Guadalupe; Martinez-Romero, Alicia; Sala de Oyanguren, Francisco; Diaz, Laura; Gomes, Angela; Balaguer, Susana; Callaghan, Robert C.";;;;IMMUNOLOGY LETTERS;NOV 2014;2014;162;1;B;;SI;334;345;;10.1016/j.imlet.2014.09.009;;;12;1,71;0;0;0;0;1;0;6;1;3;0
New technologies for autoimmune disease monitoring;"Maecker, Holden T.; Nolan, Garry P.; Fathman, Charles G.";;;;CURRENT OPINION IN ENDOCRINOLOGY DIABETES AND OBESITY;AUG 2010;2010;17;4;;;;322;328;;10.1097/MED.0b013e32833ada91;;;12;1,09;0;2;1;2;2;1;1;1;1;1
Human lymphoid organ cDC2 and macrophages play complementary roles in T follicular helper responses;"Durand, Melanie; Walter, Thomas; Pirnay, Tiphene; Naessens, Thomas; Gueguen, Paul; Goudot, Christel; Lameiras, Sonia; Chang, Qing; Talaei, Nafiseh; Ornatsky, Olga; Vassilevskaia, Tatiana; Baulande, Sylvain; Amigorena, Sebastian; Segura, Elodie";;;;JOURNAL OF EXPERIMENTAL MEDICINE;JUL 2019;2019;216;7;;;;1561;1581;;10.1084/jem.20181994;;;11;5,5;0;0;0;0;0;0;0;0;0;3
Negative Co-stimulation Constrains T Cell Differentiation by Imposing Boundaries on Possible Cell States;"Wei, Spencer C.; Sharma, Roshan; Anang, Nana-Ama A. S.; Levine, Jacob H.; Zhao, Yang; Mancuso, James J.; Setty, Manu; Sharma, Padmanee; Wang, Jing; Pe'er, Dana; Allison, James P.";;;;IMMUNITY;APR 16 2019;2019;50;4;;;;1084;+;;10.1016/j.immuni.2019.03.004;;;11;5,5;0;0;0;0;0;0;0;0;0;2
Regulatory T Cells in Ovarian Cancer Are Characterized by a Highly Activated Phenotype Distinct from that in Melanoma;"Toker, Aras; Nguyen, Linh T.; Stone, Simone C.; Yang, S. Y. Cindy; Katz, Sarah Rachel; Shaw, Patricia A.; Clarke, Blaise A.; Ghazarian, Danny; Al-Habeeb, Ayman; Easson, Alexandra; Leong, Wey L.; McCready, David R.; Reedijk, Michael; Guidos, Cynthia J.; Pugh, Trevor J.; Bernardini, Marcus Q.; Ohashi, Pamela S.";;;;CLINICAL CANCER RESEARCH;NOV 15 2018;2018;24;22;;;;5685;5696;;10.1158/1078-0432.CCR-18-0554;;;11;3,67;0;0;0;0;0;0;0;0;0;7
Protein Barcodes Enable High-Dimensional Single-Cell CRISPR Screens;"Wroblewska, Aleksandra; Dhainaut, Maxime; Ben-Zvi, Benjamin; Rose, Samuel A.; Park, Eun Sook; Amir, El-Ad David; Bektesevic, Anela; Baccarini, Alessia; Merad, Miriam; Rahman, Adeeb H.; Brown, Brian D.";;;;CELL;NOV 1 2018;2018;175;4;;;;1141;+;;10.1016/j.cell.2018.09.022;;;11;3,67;0;0;0;0;0;0;0;0;0;7
IL-15 regulates susceptibility of CD4(+) T cells to HIV infection;"Manganaro, Lara; Hong, Patrick; Hernandez, Matthew M.; Argyle, Dionne; Mulder, Lubbertus C. F.; Potla, Uma; Diaz-Griffero, Felipe; Lee, Benhur; Fernandez-Sesma, Ana; Simon, Viviana";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;OCT 9 2018;2018;115;41;;;;E9659;E9667;;10.1073/pnas.1806695115;;;11;3,67;0;0;0;0;0;0;0;0;0;7
A Universal Live Cell Barcoding-Platform for Multiplexed Human Single Cell Analysis;"Hartmann, Felix J.; Simonds, Erin F.; Bendall, Sean C.";;;;SCIENTIFIC REPORTS;JUL 17 2018;2018;8;;;;;;;10770;10.1038/s41598-018-28791-2;;;11;3,67;0;0;0;0;0;0;0;0;1;6
DRUG-NEM: Optimizing drug combinations using single-cell perturbation response to account for intratumoral heterogeneity;"Anchang, Benedict; Davis, Kara L.; Fienberg, Harris G.; Williamson, Brian D.; Bendall, Sean C.; Karacosta, Loukia G.; Tibshirani, Robert; Nolan, Garry P.; Plevritis, Sylvia K.";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;MAY 1 2018;2018;115;18;;;;E4294;E4303;;10.1073/pnas.1711365115;;;11;3,67;0;0;0;0;0;0;0;0;1;5
Applications of Mass Cytometry in Clinical Medicine The Promise and Perils of Clinical CyTOF;Behbehani, Gregory K.;;;;CLINICS IN LABORATORY MEDICINE;DEC 2017;2017;37;4;;;;945;+;;10.1016/j.cll.2017.07.010;;;11;2,75;0;0;0;0;0;0;0;0;2;7
Could Lymphocyte Profiling be Useful to Diagnose Systemic Autoimmune Diseases?;"Alegria, Guillermo Carvajal; Gazeau, Pierre; Hillion, Sophie; Daien, Claire I.; Cornec, Divi Y. K.";;;;CLINICAL REVIEWS IN ALLERGY & IMMUNOLOGY;OCT 2017;2017;53;2;;;;219;236;;10.1007/s12016-017-8608-5;;;11;2,75;0;0;0;0;0;0;0;2;5;2
Single Cell Level Quantification of Nanoparticle-Cell Interactions Using Mass Cytometry;"Ivask, Angela; Mitchell, Andrew J.; Hope, Christopher M.; Barry, Simon C.; Lombi, Enzo; Voelcker, Nicolas H.";;;;ANALYTICAL CHEMISTRY;AUG 15 2017;2017;89;16;;;;8228;8232;;10.1021/acs.analchem.7b01006;;;11;2,75;0;0;0;0;0;0;0;0;1;7
Cholesterol esterification inhibition and imatinib treatment synergistically inhibit growth of BCR-ABL mutation-independent resistant chronic myelogenous leukemia;"Bandyopadhyay, Shovik; Li, Junjie; Traer, Elie; Tyner, Jeffrey W.; Zhou, Amy; Oh, Stephen T.; Cheng, Ji-Xin";;;;PLOS ONE;JUL 18 2017;2017;12;7;;;;;;e0179558;10.1371/journal.pone.0179558;;;11;2,75;0;0;0;0;0;0;0;0;4;5
Mass Cytometry for Detection of Silver at the Bacterial Single Cell Level;"Guo, Yuting; Baumgart, Sabine; Staerk, Hans-Joachim; Harms, Hauke; Mueller, Susann";;;;FRONTIERS IN MICROBIOLOGY;JUL 17 2017;2017;8;;;;;;;1326;10.3389/fmicb.2017.01326;;;11;2,75;0;0;0;0;0;0;0;1;2;5
High-dimensional CyTOF analysis of dengue virus-infected human DCs reveals distinct viral signatures;"Hamlin, Rebecca E.; Rahman, Adeeb; Pak, Theodore R.; Maringer, Kevin; Mena, Ignacio; Bernal-Rubio, Dabeiba; Potla, Uma; Maestre, Ana M.; Fredericks, Anthony C.; Amir, El-ad D.; Kasarskis, Andrew; Ramos, Irene; Merad, Miriam; Fernandez-Sesma, Ana";;;;JCI INSIGHT;JUL 6 2017;2017;2;13;;;;;;e92424;10.1172/jci.insight.92424;;;11;2,75;0;0;0;0;0;0;0;0;4;5
Automated cell type discovery and classification through knowledge transfer;"Lee, Hao-Chih; Kosoy, Roman; Becker, Christine E.; Dudley, Joel T.; Kidd, Brian A.";;;;BIOINFORMATICS;JUN 1 2017;2017;33;11;;;;1689;1695;;10.1093/bioinformatics/btx054;;;11;2,75;0;0;0;0;0;0;0;0;4;5
Natural Killer Defective Maturation Is Associated with Adverse Clinical Outcome in Patients with Acute Myeloid Leukemia;"Chretien, Anne-Sophie; Fauriat, Cyril; Orlanducci, Florence; Galseran, Claire; Rey, Jerome; Borg, Gaelle Bouvier; Gautherot, Emmanuel; Granjeaud, Samuel; Hamel-Broza, Jean-Francois; Demerle, Clemence; Ifrah, Norbert; Lacombe, Catherine; Cornillet-Lefebvre, Pascale; Delaunay, Jacques; Toubert, Antoine; Gregori, Emilie; Luche, Herve; Malissen, Marie; Arnoulet, Christine; Nunes, Jacques A.; Vey, Norbert; Olive, Daniel";;;;FRONTIERS IN IMMUNOLOGY;MAY 29 2017;2017;8;;;;;;;573;10.3389/fimmu.2017.00573;;;11;2,75;0;0;0;0;0;0;0;0;4;4
High-selectivity cytology via lab-on-a-disc western blotting of individual cells;"Kim, John J.; Sinkala, Elly; Herr, Amy E.";;;;LAB ON A CHIP;MAR 7 2017;2017;17;5;;;;855;863;;10.1039/c6lc01333c;;;11;2,75;0;0;0;0;0;0;0;1;8;1
A Perspective on the Role of Computational Models in Immunology;Chakraborty, Arup K.;;;"Littman, DR; Yokoyama, WM";ANNUAL REVIEW OF IMMUNOLOGY, VOL 35;2017;2017;35;;;;;403;439;;10.1146/annurev-immunol-041015-055325;;;11;2,75;0;0;0;0;0;0;0;0;5;6
Cluster stability in the analysis of mass cytometry data;"Melchiotti, Rossella; Gracio, Filipe; Kordasti, Shahram; Todd, Alan K.; de Rinaldis, Emanuele";;;;CYTOMETRY PART A;JAN 2017;2017;91A;1;;;SI;73;84;;10.1002/cyto.a.23001;;;11;2,75;0;0;0;0;0;0;0;1;3;7
Wild immunology assessed by multidimensional mass cytometry;"Japp, Alberto Sada; Hoffmann, Kerstin; Schlickeiser, Stephan; Glauben, Rainer; Nikolaou, Christos; Maecker, Holden T.; Braun, Julian; Matzmohr, Nadine; Sawitzki, Birgit; Siegmund, Britta; Radbruch, Andreas; Volk, Hans-Dieter; Frentsch, Marco; Kunkel, Desiree; Thiel, Andreas";;;;CYTOMETRY PART A;JAN 2017;2017;91A;1;;;SI;85;95;;10.1002/cyto.a.22906;;;11;2,75;0;0;0;0;0;0;0;3;3;5
Characterization of lung infection-induced TCR gamma delta T cell phenotypes by CyTOF mass cytometry;"Wanke-Jellinek, Lorenz; Keegan, Joshua W.; Dolan, James W.; Lederer, James A.";;;;JOURNAL OF LEUKOCYTE BIOLOGY;MAR 2016;2016;99;3;;;;483;493;;10.1189/jlb.4A0315-115RR;;;11;2,2;0;0;0;0;0;0;1;3;3;3
Frequency Determination of Rare Populations by Flow Cytometry: A Hematopoietic Stem Cell Perspective;"Nilsson, Alexandra Rundberg; Bryder, David; Pronk, Cornelis J. H.";;;;CYTOMETRY PART A;AUG 2013;2013;83A;8;;;;721;727;;10.1002/cyto.22324;;;11;1,38;0;0;0;0;0;1;3;0;4;2
Biotinylated Polyacrylamide-Based Metal-Chelating Polymers and Their Influence on Antigen Recognition Following Conjugation to a Trastuzumab Fab Fragment;"Liu, Peng; Boyle, Amanda J.; Lu, Yijie; Reilly, Raymond M.; Winnik, Mitchell A.";;;;BIOMACROMOLECULES;SEP 2012;2012;13;9;;;;2831;2842;;10.1021/bm300843u;;;11;1,22;0;0;0;2;2;1;0;1;4;1
Ikaros: master of hematopoiesis, agent of leukemia;Davis, Kara L.;;;;THERAPEUTIC ADVANCES IN HEMATOLOGY;DEC 2011;2011;2;6;;;;359;368;;10.1177/2040620711412419;;;11;1,1;0;0;0;1;0;1;2;1;2;1
Combination anti-CTLA-4 plus anti-PD-1 checkpoint blockade utilizes cellular mechanisms partially distinct from monotherapies;"Wei, Spencer C.; Anang, Nana-Ama A. S.; Sharma, Roshan; Andrews, Miles C.; Reuben, Alexandre; Levine, Jacob H.; Cogdill, Alexandria P.; Mancuso, James J.; Wargo, Jennifer A.; Pe'er, Dana; Allison, James P.";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;NOV 5 2019;2019;116;45;;;;22699;22709;;10.1073/pnas.1821218116;;;10;5;0;0;0;0;0;0;0;0;0;1
Expression Analysis and Significance of PD-1, LAG-3, and TIM-3 in Human Non-Small Cell Lung Cancer Using Spatially Resolved and Multiparametric Single-Cell Analysis;"Datar, Ila; Sanmamed, Miguel F.; Wang, Jun; Henick, Brian S.; Choi, Jungmin; Badri, Ti; Dong, Weilai; Mani, Nikita; Toki, Maria; Mejias, Luis D.; Lozano, Maria D.; Luis Perez-Gracia, Jose; Velcheti, Vamsidhar; Hellmann, MatthewD.; Gainor, Justin F.; McEachern, Kristen; Jenkins, David; Syrigos, Konstantinos; Politi, Katerina; Gettinger, Scott; Rimm, David L.; Herbst, Roy S.; Melero, Ignacio; Chen, Lieping; Schalper, Kurt A.";;;;CLINICAL CANCER RESEARCH;AUG 1 2019;2019;25;15;;;;4663;4673;;10.1158/1078-0432.CCR-18-4142;;;10;5;0;0;0;0;0;0;0;0;0;5
Early alterations in stem-like/marrow-resident T cells and innate and myeloid cells in preneoplastic gammopathy;"Bailur, Jithendra Kini; McCachren, Samuel S.; Doxie, Deon B.; Shrestha, Mahesh; Pendleton, Katherine; Nooka, Ajay K.; Neparidze, Natalia; Parker, Terri L.; Bar, Noffar; Kaufman, Jonathan L.; Hofmeister, Craig C.; Boise, Lawrence H.; Lonial, Sagar; Kemp, Melissa L.; Dhodapkar, Kavita M.; Dhodapkar, Madhav, V";;;;JCI INSIGHT;JUN 6 2019;2019;4;11;;;;;;e127807;10.1172/jci.insight.127807;;;10;5;0;0;0;0;0;0;0;0;0;3
diffcyt: Differential discovery in high-dimensional cytometry via high-resolution clustering;"Weber, Lukas M.; Nowicka, Malgorzata; Soneson, Charlotte; Robinson, Mark D.";;;;COMMUNICATIONS BIOLOGY;MAY 14 2019;2019;2;;;;;;;183;10.1038/s42003-019-0415-5;;;10;5;0;0;0;0;0;0;0;0;0;3
New tools for pathology: a user's review of a highly multiplexed method for in situ analysis of protein and RNA expression in tissue;"Decalf, Jeremie; Albert, Matthew L.; Ziai, James";;;;JOURNAL OF PATHOLOGY;APR 2019;2019;247;5;;;;650;661;;10.1002/path.5223;;;10;5;0;0;0;0;0;0;0;0;0;6
Targeting DDR2 enhances tumor response to anti-PD-1 immunotherapy;"Tu, Megan M.; Lee, Francis Y. F.; Jones, Robert T.; Kimball, Abigail K.; Saravia, Elizabeth; Graziano, Robert F.; Coleman, Brianne; Menard, Krista; Yan, Jun; Michaud, Erin; Chang, Han; Abdel-Hafiz, Hany A.; Rozhok, Andrii, I; Duex, Jason E.; Agarwal, Neeraj; Chauca-Diaz, Ana; Johnson, Linda K.; Ng, Terry L.; Cambier, John C.; Clambey, Eric T.; Costello, James C.; Korman, Alan J.; Theodorescu, Dan";;;;SCIENCE ADVANCES;FEB 2019;2019;5;2;;;;;;eaav2437;10.1126/sciadv.aav2437;;;10;5;0;0;0;0;0;0;0;0;0;4
The Anatomical Location Shapes the Immune Infiltrate in Tumors of Same Etiology and Affects Survival;"Santegoets, Saskia J.; van Ham, Vanessa J.; Ehsan, Ilina; Charoentong, Pornpimol; Duurland, Chantal L.; van Unen, Vincent; Hollt, Thomas; van der Velden, Lilly-Ann; van Egmond, Sylvia L.; Kortekaas, Kim E.; van Steenwijk, Peggy J. de Vos; van Poelgeest, Mari Ette I. E.; Welters, Marij J. P.; van der Burg, Sjoerd H.";;;;CLINICAL CANCER RESEARCH;JAN 1 2019;2019;25;1;;;;240;252;;10.1158/1078-0432.CCR-18-1749;;;10;5;0;0;0;0;0;0;0;0;0;6
Mass Spectrometry Imaging and Integration with Other Imaging Modalities for Greater Molecular Understanding of Biological Tissues;"Siegel, Tiffany Porta; Hamm, Gregory; Bunch, Josephine; Cappell, Jo; Fletcher, John S.; Schwamborn, Kristina";;;;MOLECULAR IMAGING AND BIOLOGY;DEC 2018;2018;20;6;;;;888;901;;10.1007/s11307-018-1267-y;;;10;3,33;0;0;0;0;0;0;0;0;0;7
Atherosclerosis in the single-cell era;"Winkels, Holger; Ehinger, Erik; Ghosheh, Yanal; Wolf, Dennis; Ley, Klaus";;;;CURRENT OPINION IN LIPIDOLOGY;OCT 2018;2018;29;5;;;;389;396;;10.1097/MOL.0000000000000537;;;10;3,33;0;0;0;0;0;0;0;0;0;6
MetaCyto: A Tool for Automated Meta-analysis of Mass and Flow Cytometry Data;"Hu, Zicheng; Jujjavarapu, Chethan; Hughey, Jacob J.; Andorf, Sandra; Lee, Hao-Chih; Gherardini, Pier Federico; Spitzer, Matthew H.; Thomas, Cristel G.; Campbell, John; Dunn, Patrick; Wiser, Jeff; Kidd, Brian A.; Dudley, Joel T.; Nolan, Garry P.; Bhattacharya, Sanchita; Butte, Atul J.";;;;CELL REPORTS;JUL 31 2018;2018;24;5;;;;1377;1388;;10.1016/j.celrep.2018.07.003;;;10;3,33;0;0;0;0;0;0;0;0;0;8
Clonal analysis of Salmonella-specific effector T cells reveals serovar-specific and cross-reactive T cell responses;"Napolitani, Giorgio; Kurupati, Prathiba; Teng, Karen Wei Weng; Gibani, Malick M.; Rei, Margarida; Aulicino, Anna; Preciado-Llanes, Lorena; Wong, Michael Thomas; Becht, Etienne; Howson, Lauren; de Haas, Paola; Salio, Mariolina; Blohmke, Christoph J.; Olsen, Lars Ronn; Pinto, David Miguel Susano; Scifo, Laura; Jones, Claire; Dobinson, Hazel; Campbell, Danielle; Juel, Helene B.; Thomaides-Brears, Helena; Pickard, Derek; Bumann, Dirk; Baker, Stephen; Dougan, Gordon; Simmons, Alison; Gordon, Melita A.; Newell, Evan William; Pollard, Andrew J.; Cerundolo, Vincenzo";;;;NATURE IMMUNOLOGY;JUL 2018;2018;19;7;;;;742;+;;10.1038/s41590-018-0133-z;;;10;3,33;0;0;0;0;0;0;0;0;1;6
Circulating Endothelial Progenitor Cells Present an Inflammatory Phenotype and Function in Patients With Alcoholic Liver Cirrhosis;"Kaur, Savneet; Sehgal, Rashi; Shastry, Saggere M.; McCaughan, Geoffrey; McGuire, Helen M.; St de Groth, Barbara Fazekas; Sarin, Shiv; Trehanpati, Nirupma; Seth, Devanshi";;;;FRONTIERS IN PHYSIOLOGY;MAY 22 2018;2018;9;;;;;;;556;10.3389/fphys.2018.00556;;;10;3,33;0;0;0;0;0;0;0;0;0;7
Mass cytometry analysis of immune cells in the brain;"Korin, Ben; Dubovik, Tania; Rolls, Asya";;;;NATURE PROTOCOLS;FEB 2018;2018;13;2;;;;377;391;;10.1038/nprot.2017.155;;;10;3,33;0;0;0;0;0;0;0;0;3;4
CyteGuide: Visual Guidance for Hierarchical Single-Cell Analysis;"Hollt, Thomas; Pezzotti, Nicola; van Unen, Vincent; Koning, Frits; Lelieveldt, Boudewijn P. F.; Vilanova, Anna";;;;IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS;JAN 2018;2018;24;1;;;;739;748;;10.1109/TVCG.2017.2744318;IEEE VIS Conference;OCT 01-06, 2017;10;3,33;0;0;0;0;0;0;0;0;2;5
A computational approach for phenotypic comparisons of cell populations in high-dimensional cytometry data;"Platon, Ludovic; Pejoski, David; Gautreau, Guillaume; Targat, Brice; Le Grand, Roger; Beignon, Anne-Sophie; Tchitchek, Nicolas";;;;METHODS;JAN 1 2018;2018;132;;;;;66;75;;10.1016/j.ymeth.2017.09.005;;;10;3,33;0;0;0;0;0;0;0;0;3;5
In depth comparative phenotyping of blood innate myeloid leukocytes from healthy humans and macaques using mass cytometry;"Elhmouzi-Younes, Jamila; Palgen, Jean-Louis; Tchitchek, Nicolas; Delandre, Simon; Namet, Inana; Bodinham, Caroline L.; Pizzoferro, Kathleen; Lewis, David J. M.; Le Grand, Roger; Cosma, Antonio; Beignon, Anne-Sophie";;;;CYTOMETRY PART A;OCT 2017;2017;91A;10;;;SI;969;982;;10.1002/cyto.a.23107;;;10;2,5;0;0;0;0;0;0;0;0;2;5
Regulatory myeloid cells: an underexplored continent in B-cell lymphomas;"Roussel, Mikael; Irish, Jonathan M.; Menard, Cedric; Lhomme, Faustine; Tarte, Karin; Fest, Thierry";;;;CANCER IMMUNOLOGY IMMUNOTHERAPY;AUG 2017;2017;66;8;;;;1103;1111;;10.1007/s00262-017-2036-5;;;10;2,5;0;0;0;0;0;0;0;0;4;5
CD44 variant isoform 9 emerges in response to injury and contributes to the regeneration of the gastric epithelium;"Bertaux-Skeirik, Nina; Wunderlich, Mark; Teal, Emma; Chakrabarti, Jayati; Biesiada, Jacek; Mahe, Maxime; Sundaram, Nambirajan; Gabre, Joel; Hawkins, Jennifer; Jian, Gao; Engevik, Amy C.; Yang, Li; Wang, Jiang; Goldenring, James R.; Qualls, Joseph E.; Medvedovic, Mario; Helmrath, Michael A.; Diwan, Tayyab; Mulloy, James C.; Zavros, Yana";;;;JOURNAL OF PATHOLOGY;AUG 2017;2017;242;4;;;;463;475;;10.1002/path.4918;;;10;2,5;0;0;0;0;0;0;0;0;3;2
BrainScope: interactive visual exploration of the spatial and temporal human brain transcriptome;"Huisman, Sjoerd M. H.; van Lew, Baldur; Mahfouz, Ahmed; Pezzotti, Nicola; Hollt, Thomas; Michielsen, Lieke; Vilanova, Anna; Reinders, Marcel J. T.; Lelieveldt, Boudewijn P. F.";;;;NUCLEIC ACIDS RESEARCH;JUN 2 2017;2017;45;10;;;;;;e83;10.1093/nar/gkx046;;;10;2,5;0;0;0;0;0;0;0;1;7;1
MYB fusions and CD markers as tools for authentication and purification of cancer stem cells from salivary adenoid cystic carcinoma;"Panaccione, Alex; Zhanga, Yi; Ryan, Molly; Moskaluk, Christopher A.; Anderson, Karen S.; Yarbrough, Wendell G.; Ivanov, Sergey V.";;;;STEM CELL RESEARCH;MAY 2017;2017;21;;;;;160;166;;10.1016/j.scr.2017.05.002;;;10;2,5;0;0;0;0;0;0;0;0;3;5
Dichotomy of cellular inhibition by small-molecule inhibitors revealed by single-cell analysis;"Vogel, Robert M.; Erez, Amir; Altan-Bonnet, Gregoire";;;;NATURE COMMUNICATIONS;SEP 2016;2016;7;;;;;;;12428;10.1038/ncomms12428;;;10;2;0;0;0;0;0;0;0;0;4;5
Multiplexed Imaging of Intracellular Protein Networks;"Grecco, Hernan E.; Imtiaz, Sarah; Zamir, Eli";;;;CYTOMETRY PART A;AUG 2016;2016;89A;8;;;SI;761;775;;10.1002/cyto.a.22876;;;10;2;0;0;0;0;0;0;1;4;4;1
Immune Profiles to Predict Response to Desensitization Therapy in Highly HLA-Sensitized Kidney Transplant Candidates;"Yabu, Julie M.; Siebert, Janet C.; Maecker, Holden T.";;;;PLOS ONE;APR 14 2016;2016;11;4;;;;;;e0153355;10.1371/journal.pone.0153355;;;10;2;0;0;0;0;0;0;1;3;0;4
Human NK Cell Diversity in viral infection: Ramifications of Ramification;"Strauss-Albee, Dara M.; Blish, Catherine A.";;;;FRONTIERS IN IMMUNOLOGY;MAR 3 2016;2016;7;;;;;;;66;10.3389/fimmu.2016.00066;;;10;2;0;0;0;0;0;0;0;3;2;2
Coordinate actions of innate immune responses oppose those of the adaptive immune system during Salmonella infection of mice;"Hotson, Andrew N.; Gopinath, Smita; Nicolau, Monica; Khasanova, Anna; Finck, Rachel; Monack, Denise; Nolan, Garry P.";;;;SCIENCE SIGNALING;JAN 12 2016;2016;9;410;;;;;;ra4;10.1126/scisignal.aaa9303;;;10;2;0;0;0;0;0;0;2;4;2;1
Deep Profiling Human T Cell Heterogeneity by Mass Cytometry;"Cheng, Y.; Newell, E. W.";;;Alt, FW;ADVANCES IN IMMUNOLOGY, VOL 131;2016;2016;131;;;;;101;134;;10.1016/bs.ai.2016.02.002;;;10;2;0;0;0;0;0;0;0;4;3;3
Laminar flow mediated continuous single-cell analysis on a novel poly(dimethylsiloxane) microfluidic chip;"Deng, Bin; Tia, Yu; Yu, Xu; Song, Jian; Guo, Feng; Xiao, Yuxiu; Zhang, Zhiling";;;;ANALYTICA CHIMICA ACTA;APR 11 2014;2014;820;;;;;104;111;;10.1016/j.aca.2014.02.033;;;10;1,43;0;0;0;0;0;2;0;3;2;2
Quantifying CD4 receptor protein in two human CD4+lymphocyte preparations for quantitative flow cytometry;"Wang, Meiyao; Misakian, Martin; He, Hua-Jun; Bajcsy, Peter; Abbasi, Fatima; Davis, Jeffrey M.; Cole, Kenneth D.; Turko, Illarion V.; Wang, Lili";;;;CLINICAL PROTEOMICS;2014;2014;11;;;;;;;43;10.1186/1559-0275-11-43;;;10;1,43;0;0;0;0;0;0;2;2;3;3
Next-generation computational tools for interrogating cancer immunity;"Finotello, Francesca; Rieder, Dietmar; Hackl, Hubert; Trajanoski, Zlatko";;;;NATURE REVIEWS GENETICS;DEC 2019;2019;20;12;;;;724;746;;10.1038/s41576-019-0166-7;;;9;4,5;0;0;0;0;0;0;0;0;0;0
Integrated multiomic analysis reveals comprehensive tumour heterogeneity and novel immunophenotypic classification in hepatocellular carcinomas;"Zhang, Qi; Lou, Yu; Yang, Jiaqi; Wan, Junli; Feng, Jie; Zhao, Yali; Wang, Lin; Huang, Xing; Fu, Qihan; Ye, Mao; Zhang, Xiaozhen; Chen, Yiwen; Ma, Ce; Ge, Hongbin; Wang, Jianing; Wu, Jiangchao; Wei, Tao; Chen, Qi; Wu, Junqing; Yu, Chengxuan; Xiao, Yanyu; Feng, Xinhua; Guo, Guoji; Liang, Tingbo; Bai, Xueli";;;;GUT;NOV 2019;2019;68;11;;;;2019;2031;;10.1136/gutjnl-2019-318912;;;9;4,5;0;0;0;0;0;0;0;0;0;4
Stress-Induced Changes in Bone Marrow Stromal Cell Populations Revealed through Single-Cell Protein Expression Mapping;"Severe, Nicolas; Karabacak, Nezihi Murat; Gustafsson, Karin; Baryawno, Ninib; Courties, Gabriel; Kfoury, Youmna; Kokkaliaris, Konstantinos D.; Rhee, Catherine; Lee, Dongjun; Scadden, Elizabeth W.; Garcia-Robledo, Juan Esteban; Brouse, Thomas; Nahrendorf, Matthias; Toner, Mehmet; Scadden, David T.";;;;CELL STEM CELL;OCT 3 2019;2019;25;4;;;;570;+;;10.1016/j.stem.2019.06.003;;;9;4,5;0;0;0;0;0;0;0;0;0;4
B cell alterations during BAFF inhibition with belimumab in SLE;"Ramskold, Daniel; Parodis, Ioannis; Lakshmikanth, Tadepally; Sippl, Natalie; Khademi, Mohsen; Chen, Yang; Zickert, Agneta; Mikes, Jaromir; Achour, Adnane; Amara, Khaled; Piehl, Fredrik; Brodin, Petter; Gunnarsson, Iva; Malmstrom, Vivianne";;;;EBIOMEDICINE;FEB 2019;2019;40;;;;;517;527;;10.1016/j.ebiom.2018.12.035;;;9;4,5;0;0;0;0;0;0;0;0;0;7
The FGFR1 V561M Gatekeeper Mutation Drives AZD4547 Resistance through STAT3 Activation and EMT;"Ryan, Molly R.; Sohl, Christal D.; Luo, BeiBei; Anderson, Karen S.";;;;MOLECULAR CANCER RESEARCH;FEB 2019;2019;17;2;;;;532;543;;10.1158/1541-7786.MCR-18-0429;;;9;4,5;0;0;0;0;0;0;0;0;0;6
Differential Induction of IFN-alpha and Modulation of CD112 and CD54 Expression Govern the Magnitude of NK Cell IFN-gamma Response to Influenza A Viruses;"Kronstad, Lisa M.; Seiler, Christof; Vergara, Rosemary; Holmes, Susan P.; Bish, Catherine A.";;;;JOURNAL OF IMMUNOLOGY;OCT 1 2018;2018;201;7;;;;2117;2131;;10.4049/jimmunol.1800161;;;9;3;0;0;0;0;0;0;0;0;0;6
Quantitative Analyses of the Tumor Microenvironment Composition and Orientation in the Era of Precision Medicine;"Petitprez, Florent; Sun, Cheng-Ming; Lacroix, Laetitia; Sautes-Fridman, Catherine; de Reynies, Aurelien; Fridman, Wolf H.";;;;FRONTIERS IN ONCOLOGY;SEP 25 2018;2018;8;;;;;;;390;10.3389/fonc.2018.00390;;;9;3;0;0;0;0;0;0;0;0;0;5
Comprehensive immunoproteogenomic analyses of malignant pleural mesothelioma;"Lee, Hyun-Sung; Jang, Hee-Jin; Choi, Jong Min; Zhang, Jun; de Rosen, Veronica Lenge; Wheeler, Thomas M.; Lee, Ju-Seog; Tu, Thuydung; Jindra, Peter T.; Kerman, Ronald H.; Jung, Sung Yun; Kheradmand, Farrah; Sugarbaker, David J.; Burt, Bryan M.";;;;JCI INSIGHT;APR 5 2018;2018;3;7;;;;;;e98575;10.1172/jci.insight.98575;;;9;3;0;0;0;0;0;0;0;0;0;4
Ruthenium counterstaining for imaging mass cytometry;"Catena, Raul; Montuenga, Luis M.; Bodenmiller, Bernd";;;;JOURNAL OF PATHOLOGY;APR 2018;2018;244;4;;;;479;484;;10.1002/path.5049;;;9;3;0;0;0;0;0;0;0;0;0;7
Highly multiplexed and quantitative cell-surface protein profiling using genetically barcoded antibodies;"Pollock, Samuel B.; Hu, Amy; Mou, Yun; Martinko, Alexander J.; Julien, Olivier; Hornsby, Michael; Ploder, Lynda; Adams, Jarrett J.; Geng, Huimin; Muschen, Markus; Sidhu, Sachdev S.; Moffat, Jason; Wells, James A.";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;MAR 13 2018;2018;115;11;;;;2836;2841;;10.1073/pnas.1721899115;;;9;3;0;0;0;0;0;0;0;0;2;5
Apatinib exhibits anti-leukemia activity in preclinical models of acute lymphoblastic leukemia;"Deng, Manman; Zha, Jie; Jiang, Zhiwu; Jia, Xian; Shi, Yuanfei; Li, Peng; Chen, Xiao Lei; Fang, Zhihong; Du, Zhiqiang; Xu, Bing";;;;JOURNAL OF TRANSLATIONAL MEDICINE;FEB 28 2018;2018;16;;;;;;;47;10.1186/s12967-018-1421-y;;;9;3;0;0;0;0;0;0;0;0;0;4
Prime and Boost Vaccination Elicit a Distinct Innate Myeloid Cell Immune Response;"Palgen, Jean-Louis; Tchitchek, Nicolas; Elhmouzi-Younes, Jamila; Delandre, Simon; Namet, Inana; Rosenbaum, Pierre; Dereuddre-Bosquet, Nathalie; Martinon, Frederic; Cosma, Antonio; Levy, Yves; Le Grand, Roger; Beignon, Anne-Sophie";;;;SCIENTIFIC REPORTS;FEB 15 2018;2018;8;;;;;;;3087;10.1038/s41598-018-21222-2;;;9;3;0;0;0;0;0;0;0;0;2;2
Discovery of human cell selective effector molecules using single cell multiplexed activity metabolomics;"Earl, David C.; Ferrell, P. Brent, Jr.; Leelatian, Nalin; Froese, Jordan T.; Reisman, Benjamin J.; Irish, Jonathan M.; Bachmann, Brian O.";;;;NATURE COMMUNICATIONS;JAN 2 2018;2018;9;;;;;;;39;10.1038/s41467-017-02470-8;;;9;3;0;0;0;0;0;0;0;0;3;6
Immune monitoring for precision medicine in allergy and asthma;"Boyd, Scott Dexter; Hoh, Ramona Amy; Nadeau, Kari Christine; Galli, Stephen Joseph";;;;CURRENT OPINION IN IMMUNOLOGY;OCT 2017;2017;48;;;;;82;91;;10.1016/j.coi.2017.08.007;;;9;2,25;0;0;0;0;0;0;0;1;3;4
Mass Cytometry Identifies Distinct Lung CD4(+) T Cell Patterns in Lofgren's Syndrome and Non-Lofgren's Syndrome Sarcoidosis;"Kaiser, Ylva; Lakshmikanth, Tadepally; Chen, Yang; Mikes, Jaromir; Eklund, Anders; Brodin, Petter; Achour, Adnane; Grunewald, Johan";;;;FRONTIERS IN IMMUNOLOGY;SEP 12 2017;2017;8;;;;;;;1130;10.3389/fimmu.2017.01130;;;9;2,25;0;0;0;0;0;0;0;0;3;6
RNA-Seq and CyTOF immuno-profiling of regenerating lacrimal glands identifies a novel subset of cells expressing muscle-related proteins;"Hawley, Dillon; Ding, Jian; Thotakura, Suharika; Haskett, Scott; Aluri, Hema; Kublin, Claire; Michel, Audrey; Clapisson, Lisa; Mingueneau, Michael; Zoukhri, Driss";;;;PLOS ONE;JUN 29 2017;2017;12;6;;;;;;e0179385;10.1371/journal.pone.0179385;;;9;2,25;0;0;0;0;0;0;0;1;3;5
Liposome-Encapsulated NaLnF(4) Nanoparticles for Mass Cytometry: Evaluating Nonspecific Binding to Cells;"Pichaandi, Jothirmayanantham; Tong, Lemuel; Bouzekri, Alexandre; Yu, Qing; Ornatsky, Olga; Baranov, Vladimir; Winnik, Mitchell A.";;;;CHEMISTRY OF MATERIALS;JUN 13 2017;2017;29;11;;;;4980;4990;;10.1021/acs.chemmater.7b01339;;;9;2,25;0;0;0;0;0;0;0;2;2;4
Effect of cryopreservation on delineation of immune cell subpopulations in tumor specimens as determined by multiparametric single cell mass cytometry analysis;"Kadic, Elma; Moniz, Raymond J.; Huo, Ying; Chi, An; Kariv, Ilona";;;;BMC IMMUNOLOGY;FEB 2 2017;2017;18;;;;;;;6;10.1186/s12865-017-0192-1;;;9;2,25;0;0;0;0;0;0;0;0;2;6
Studying hematopoiesis using single-cell technologies;"Ye, Fang; Huang, Wentao; Guo, Guoji";;;;JOURNAL OF HEMATOLOGY & ONCOLOGY;JAN 21 2017;2017;10;;;;;;;27;10.1186/s13045-017-0401-7;;;9;2,25;0;0;0;0;0;0;0;2;3;2
Analysis of Signaling Networks at the Single-Cell Level Using Mass Cytometry;"Bandyopadhyay, Shovik; Fisher, Daniel A. C.; Malkova, Olga; Oh, Stephen T.";;;"Tan, AC; Huang, PH";KINASE SIGNALING NETWORKS;2017;2017;1636;;;;;371;392;;10.1007/978-1-4939-7154-1_24;;;9;2,25;0;0;0;0;0;0;0;0;5;4
Mass Cytometry of Follicular Lymphoma Tumors Reveals Intrinsic Heterogeneity in Proteins Including HLA-DR and a Deficit in Nonmalignant Plasmablast and Germinal Center B-Cell Populations;"Wogsland, Cara Ellen; Greenplate, Allison Rae; Kolstad, Arne; Myklebust, June Helen; Irish, Jonathan Michael; Huse, Kanutte";;;;CYTOMETRY PART B-CLINICAL CYTOMETRY;JAN 2017;2017;92;1;;;SI;79;87;;10.1002/cyto.b.21498;;;9;2,25;0;0;0;0;0;0;0;1;1;6
Monitoring of the Immune Dysfunction in Cancer Patients;"Santegoets, Saskia J. A. M.; Welters, Marij J. P.; van der Burg, Sjoerd H.";;;;VACCINES;SEP 2016;2016;4;3;;;;;;UNSP 29;10.3390/vaccines4030029;;;9;1,8;0;0;0;0;0;0;0;4;1;4
Dissecting the Molecular Mechanisms of the Tropism of Varicella-Zoster Virus for Human T Cells;"Sen, Nandini; Arvin, Ann M.";;;;JOURNAL OF VIROLOGY;APR 2016;2016;90;7;;;;3284;3287;;10.1128/JVI.03375-14;;;9;1,8;0;0;0;0;0;0;0;2;4;1
Flow Cytometry Protocols for Surface and Intracellular Antigen Analyses of Neural Cell Types;"Menon, Vishal; Thomas, Ria; Ghale, Arun R.; Reinhard, Christina; Pruszak, Jan";;;;JOVE-JOURNAL OF VISUALIZED EXPERIMENTS;DEC 2014;2014;;94;;;;;;e52241;10.3791/52241;;;9;1,29;0;0;0;0;0;1;3;3;2;0
High-Dimensional Analysis of Human CD8(+) T Cell Phenotype, Function, and Antigen Specificity;"Newell, Evan W.; Lin, Wenyu";;;"Fienberg, HG; Nolan, GP";HIGH-DIMENSIONAL SINGLE CELL ANALYSIS: MASS CYTOMETRY, MULTI-PARAMETRIC FLOW CYTOMETRY AND BIOINFORMATIC TECHNIQUES;2014;2014;377;;;;;61;84;;10.1007/82_2013_354;;;9;1,29;0;0;0;0;0;1;1;3;2;2
Mapping lung cancer epithelial-mesenchymal transition states and trajectories with single-cell resolution;"Karacosta, Loukia G.; Anchang, Benedict; Ignatiadis, Nikolaos; Kimmey, Samuel C.; Benson, Jalen A.; Shrager, Joseph B.; Tibshirani, Robert; Bendall, Sean C.; Plevritis, Sylvia K.";;;;NATURE COMMUNICATIONS;DEC 6 2019;2019;10;;;;;;;5587;10.1038/s41467-019-13441-6;;;8;4;0;0;0;0;0;0;0;0;0;1
Inhibiting Interleukin 11 Signaling Reduces Hepatocyte Death and Liver Fibrosis, Inflammation, and Steatosis in Mouse Models of Nonalcoholic Steatohepatitis;"Widjaja, Anissa A.; Singh, Brijesh K.; Adami, Eleonora; Viswanathan, Sivakumar; Dong, Jinrui; D'Agostino, Giuseppe A.; Ng, Benjamin; Lim, Wei Wen; Tan, Jessie; Paleja, Bhairav S.; Tripathi, Madhulika; Lim, Sze Yun; Shekeran, Shamini Guna; Chothani, Sonia P.; Rabes, Anne; Sombetzki, Martina; Bruinstroop, Eveline; Min, Lio Pei; Sinha, Rohit A.; Albani, Salvatore; Yen, Paul M.; Schafer, Sebastian; Cook, Stuart A.";;;;GASTROENTEROLOGY;SEP 2019;2019;157;3;;;;777;+;;10.1053/j.gastro.2019.05.002;;;8;4;0;0;0;0;0;0;0;0;0;3
Human Monocyte Subsets and Phenotypes in Major Chronic Inflammatory Diseases;"Kapellos, Theodore S.; Bonaguro, Lorenzo; Gemuend, Ioanna; Reusch, Nico; Saglam, Adem; Hinkley, Emily R.; Schultze, Joachim L.";;;;FRONTIERS IN IMMUNOLOGY;AUG 30 2019;2019;10;;;;;;;2035;10.3389/fimmu.2019.02035;;;8;4;0;0;0;0;0;0;0;0;0;1
Meeting the Challenges of High-Dimensional Single-Cell Data Analysis in Immunology;"Patil, Subarea; Heuser, Christoph; de Almeida, Gustavo P.; Theis, Fabian J.; Zielinski, Christina E.";;;;FRONTIERS IN IMMUNOLOGY;JUL 3 2019;2019;10;;;;;;;1515;10.3389/fimmu.2019.01515;;;8;4;0;0;0;0;0;0;0;0;0;2
Expansion and activation of distinct central memory T lymphocyte subsets in complex regional pain syndrome;"Russo, Marc A.; Fiore, Nathan T.; van Vreden, Caryn; Bailey, Dominic; Santarelli, Danielle M.; McGuire, Helen M.; de St Groth, Barbara Fazekas; Austin, Paul J.";;;;JOURNAL OF NEUROINFLAMMATION;MAR 18 2019;2019;16;;;;;;;63;10.1186/s12974-019-1449-9;;;8;4;0;0;0;0;0;0;0;0;0;4
Mass Cytometry Analysis Reveals that Specific Intratumoral CD4(+) T Cell Subsets Correlate with Patient Survival in Follicular Lymphoma;"Yang, Zhi-Zhang; Kim, Hyo Jin; Villasboas, Jose C.; Price-Troska, Tammy; Jalali, Shahrzad; Wu, Hongyan; Luchtel, Rebecca A.; Polley, Mei-Yin C.; Novak, Anne J.; Ansell, Stephen M.";;;;CELL REPORTS;FEB 19 2019;2019;26;8;;;;2178;+;;10.1016/j.celrep.2019.01.085;;;8;4;0;0;0;0;0;0;0;0;0;3
Acute microglia ablation induces neurodegeneration in the somatosensory system;"Rubino, Stephen J.; Mayo, Lior; Wimmer, Isabella; Siedler, Victoria; Brunner, Florian; Hametner, Simon; Madi, Asaf; Lanser, Amanda; Moreira, Thais; Donnelly, Dustin; Cox, Laura; Rezende, Rafael Machado; Butovsky, Oleg; Lassmann, Hans; Weiner, Howard L.";;;;NATURE COMMUNICATIONS;NOV 1 2018;2018;9;;;;;;;4578;10.1038/s41467-018-05929-4;;;8;2,67;0;0;0;0;0;0;0;0;0;6
Cdh1 and Pik3ca Mutations Cooperate to Induce Immune-Related Invasive Lobular Carcinoma of the Breast;"An, Yeji; Adams, Jessica R.; Hollern, Daniel P.; Zhao, Anthony; Chang, Stephen G.; Gams, Miki S.; Chung, Philip E. D.; He, Xiaping; Jangra, Rhea; Shah, Juhi S.; Yang, Joanna; Beck, Lauren A.; Raghuram, Nandini; Kozma, Katelyn J.; Loch, Amanda J.; Wang, Wei; Fan, Cheng; Done, Susan J.; Zacksenhaus, Eldad; Guidos, Cynthia J.; Perou, Charles M.; Egan, Sean E.";;;;CELL REPORTS;OCT 16 2018;2018;25;3;;;;702;+;;10.1016/j.celrep.2018.09.056;;;8;2,67;0;0;0;0;0;0;0;0;0;4
Heterogeneity of circulating CD8 T-cells specific to islet, neo-antigen and virus in patients with type 1 diabetes mellitus;"Laban, Sandra; Suwandi, Jessica S.; van Unen, Vincent; Pool, Jos; Wesselius, Joris; Hollt, Thomas; Pezzotti, Nicola; Vilanova, Anna; Lelieveldt, Boudewijn P. F.; Roep, Bart O.";;;;PLOS ONE;AUG 8 2018;2018;13;8;;;;;;e0200818;10.1371/journal.pone.0200818;;;8;2,67;0;0;0;0;0;0;0;0;0;6
Diagnostic Tools for Inborn Errors of Human Immunity (Primary Immunodeficiencies and Immune Dysregulatory Diseases);"Richardson, Annely M.; Moyer, Ann M.; Hasadsri, Linda; Abraham, Roshini S.";;;;CURRENT ALLERGY AND ASTHMA REPORTS;MAR 2018;2018;18;3;;;;;;19;10.1007/s11882-018-0770-1;;;8;2,67;0;0;0;0;0;0;0;0;1;6
CellCycleTRACER accounts for cell cycle and volume in mass cytometry data;"Rapsomaniki, Maria Anna; Lun, Xiao-Kang; Woerner, Stefan; Laumanns, Marco; Bodenmiller, Bernd; Martinez, Maria Rodriguez";;;;NATURE COMMUNICATIONS;FEB 12 2018;2018;9;;;;;;;632;10.1038/s41467-018-03005-5;;;8;2,67;0;0;0;0;0;0;0;0;1;4
High throughput automated analysis of big flow cytometry data;"Rahim, Albina; Meskas, Justin; Drissler, Sibyl; Yue, Alice; Lorenc, Anna; Laing, Adam; Saran, Namita; White, Jacqui; Abeler-Dorner, Lucie; Hayday, Adrian; Brinkman, Ryan R.";;;;METHODS;FEB 1 2018;2018;134;;;;;164;176;;10.1016/j.ymeth.2017.12.015;;;8;2,67;0;0;0;0;0;0;0;0;1;6
Mass Cytometry Assays for Antigen-Specific T Cells Using CyTOF;"Lin, Dongxia; Maecker, Holden T.";;;"Hawley, TS; Hawley, RG";FLOW CYTOMETRY PROTOCOLS, 4TH EDITION;2018;2018;1678;;;;;37;47;;10.1007/978-1-4939-7346-0_3;;;8;2,67;0;0;0;0;0;0;0;0;4;3
SOX2 immunity and tissue resident memory in children and young adults with glioma;"Vasquez, Juan C.; Huttner, Anita; Zhang, Lin; Marks, Asher; Chan, Amy; Baehring, Joachim M.; Kahle, Kristopher T.; Dhodapkar, Kavita M.";;;;JOURNAL OF NEURO-ONCOLOGY;AUG 2017;2017;134;1;;;;41;53;;10.1007/s11060-017-2515-8;;;8;2;0;0;0;0;0;0;0;0;4;2
Of Cytometry, Stem Cells and Fountain of Youth;"Galkowski, Dariusz; Ratajczak, Mariusz Z.; Kocki, Janusz; Darzynkiewicz, Zbigniew";;;;STEM CELL REVIEWS AND REPORTS;AUG 2017;2017;13;4;;;;465;481;;10.1007/s12015-017-9733-5;;;8;2;0;0;0;0;0;0;0;2;5;1
IKK inhibition by BMS-345541 suppresses breast tumorigenesis and metastases by targeting GD2(+) cancer stem cells;"Battula, Venkata Lokesh; Nguyen, Khoa; Sun, Jeff; Pitner, Mary Kathryn; Yuan, Bin; Bartholomeusz, Chandra; Hail, Numsen; Andreeff, Michael";;;;ONCOTARGET;JUN 6 2017;2017;8;23;;;;36936;36949;;10.18632/oncotarget.16294;;;8;2;0;0;0;0;0;0;0;1;4;1
Isolation and high-dimensional phenotyping of gastrointestinal immune cells;"David, Bruna A.; Rubino, Stephen; Moreira, Thais G.; Freitas-Lopes, Maria Alice; Araujo, Alan M.; Paul, Nicole E.; Rezende, Rafael M.; Menezes, Gustavo B.";;;;IMMUNOLOGY;MAY 2017;2017;151;1;;;;56;70;;10.1111/imm.12706;;;8;2;0;0;0;0;0;0;0;0;4;4
Multiparameter Single Cell Profiling of Airway Inflammatory Cells;"Yao, Yi; Welp, Tobias; Liu, Qing; Niu, Naiqian; Wang, Xiaomei; Britto, Clemente J.; Krishnaswamy, Smita; Chupp, Geoffrey L.; Montgomery, Ruth R.";;;;CYTOMETRY PART B-CLINICAL CYTOMETRY;JAN 2017;2017;92;1;;;SI;12;20;;10.1002/cyto.b.21491;;;8;2;0;0;0;0;0;0;0;2;0;3
The newborn human NK cell repertoire is phenotypically formed but functionally reduced;"Strauss-Albee, Dara M.; Liang, Emily C.; Ranganath, Thanmayi; Aziz, Natali; Blish, Catherine A.";;;;CYTOMETRY PART B-CLINICAL CYTOMETRY;JAN 2017;2017;92;1;;;SI;33;41;;10.1002/cyto.b.21485;;;8;2;0;0;0;0;0;0;0;3;2;2
densityCut: an efficient and versatile topological approach for automatic clustering of biological data;"Ding, Jiarui; Shah, Sohrab; Condon, Anne";;;;BIOINFORMATICS;SEP 1 2016;2016;32;17;;;;2567;2576;;10.1093/bioinformatics/btw227;;;8;1,6;0;0;0;0;0;0;0;0;5;2
Stand-Sit Microchip for High-Throughput, Multiplexed Analysis of Single Cancer Cells;"Ramirez, Lisa; Herschkowitz, Jason I.; Wang, Jun";;;;SCIENTIFIC REPORTS;SEP 1 2016;2016;6;;;;;;;32505;10.1038/srep32505;;;8;1,6;0;0;0;0;0;0;0;2;2;3
Emerging single-cell technologies in immunology;"Herderschee, Jacobus; Fenwick, Craig; Pantaleo, Giuseppe; Roger, Thierry; Calandra, Thierry";;;;JOURNAL OF LEUKOCYTE BIOLOGY;JUL 2015;2015;98;1;;;;23;32;;10.1189/jlb.6RU0115-020R;;;8;1,33;0;0;0;0;0;0;4;1;2;1
Multiplexed Peptide-MHC Tetramer Staining with Mass Cytometry;"Leong, Mei Ling; Newell, Evan W.";;;"Singh, AK; Chandrasekaran, A";SINGLE CELL PROTEIN ANALYSIS: METHODS AND PROTOCOLS;2015;2015;1346;;;;;115;131;;10.1007/978-1-4939-2987-0_9;;;8;1,33;0;0;0;0;0;0;1;2;2;3
Integrin beta(1)-enriched extracellular vesicles mediate monocyte adhesion and promote liver inflammation in murine NASH;"Guo, Qianqian; Furuta, Kunimaro; Lucien, Fabrice; Sanchez, Luz Helena Gutierrez; Hirsova, Petra; Krishnan, Anuradha; Kabashima, Ayano; Pavelko, Kevin D.; Madden, Benjamin; Alhuwaish, Husam; Gao, Yandong; Revzin, Alexander; Ibrahim, Samar H.";;;;JOURNAL OF HEPATOLOGY;DEC 2019;2019;71;6;;;;1193;1205;;10.1016/j.jhep.2019.07.019;;;7;3,5;0;0;0;0;0;0;0;0;0;1
Development, application and computational analysis of high-dimensional fluorescent antibody panels for single-cell flow cytometry;"Brummelman, Jolanda; Haftmann, Claudia; Nunez, Nicolas Gonzalo; Alvisi, Giorgia; Mazza, Emilia M. C.; Becher, Burkhard; Lugli, Enrico";;;;NATURE PROTOCOLS;JUL 2019;2019;14;7;;;;1946;1969;;10.1038/s41596-019-0166-2;;;7;3,5;0;0;0;0;0;0;0;0;0;3
The Combination of MEK Inhibitor With Immunomodulatory Antibodies Targeting Programmed Death 1 and Programmed Death Ligand 1 Results in Prolonged Survival in Kras/p53-Driven Lung Cancer;"Lee, Jong Woo; Zhang, Yu; Eoh, Kyung Jin; Sharma, Roshan; Sanmamed, Miguel F.; Wu, Jenny; Choi, Justin; Park, Hee Sun; Iwasaki, Akiko; Kaftan, Edward; Chen, Lieping; Papadimitrakopoulou, Vali; Herbst, Roy S.; Koo, Ja Seok";;;;JOURNAL OF THORACIC ONCOLOGY;JUN 2019;2019;14;6;;;;1046;1060;;10.1016/j.jtho.2019.02.004;;;7;3,5;0;0;0;0;0;0;0;0;0;5
Chemical-Modified Nucleotide-Based Elemental Tags for High-Sensitive Immunoassay;"Hu, Zhian; Sun, Gongwei; Jiang, Wencan; Xu, Fujian; Zhang, Yuqing; Xia, Mengchan; Pan, Xingyu; Xing, Zhi; Zhang, Sichun; Zhang, Xinrong";;;;ANALYTICAL CHEMISTRY;MAY 7 2019;2019;91;9;;;;5980;5986;;10.1021/acs.analchem.9b00405;;;7;3,5;0;0;0;0;0;0;0;0;0;2
In-Depth Characterization of Monocyte-Derived Macrophages using a Mass Cytometry-Based Phagocytosis Assay;"Schulz, Daniel; Severin, Yannik; Zanotelli, Vito Riccardo Tomaso; Bodenmiller, Bernd";;;;SCIENTIFIC REPORTS;FEB 13 2019;2019;9;;;;;;;1925;10.1038/s41598-018-38127-9;;;7;3,5;0;0;0;0;0;0;0;0;0;3
The anatomy of single cell mass cytometry data;"Olsen, Lars R.; Leipold, Michael D.; Pedersen, Christina B.; Maecker, Holden Terry";;;;CYTOMETRY PART A;FEB 2019;2019;95A;2;;;;156;172;;10.1002/cyto.a.23621;;;7;3,5;0;0;0;0;0;0;0;0;0;4
The end of omics? High dimensional single cell analysis in precision medicine;"Galli, Edoardo; Friebel, Ekaterina; Ingelfinger, Florian; Unger, Susanne; Nunez, Nicolas Gonzalo; Becher, Burkhard";;;;EUROPEAN JOURNAL OF IMMUNOLOGY;FEB 2019;2019;49;2;;;;212;220;;10.1002/eji.201847758;;;7;3,5;0;0;0;0;0;0;0;0;0;3
Morphological profiling using machine learning reveals emergent subpopulations of interferon-gamma-stimulated mesenchymal stromal cells that predict immunosuppression;"Marklein, Ross A.; Klinker, Matthew W.; Drake, Katherine A.; Polikowsky, Hannah G.; Lessey-Morillon, Elizabeth C.; Bauer, Steven R.";;;;CYTOTHERAPY;JAN 2019;2019;21;1;;;;17;31;;10.1016/j.jcyt.2018.10.008;;;7;3,5;0;0;0;0;0;0;0;0;0;4
Cancer immunophenotyping by seven-colour multispectral imaging without tyramide signal amplification;"Lisselstelin, Marieke E.; Brouwer, Thomas P.; Abdulrahman, Ziena; Reidy, Eileen; Ramalheiro, Ana; Heeren, A. Marijne; Vahrmeljer, Alexander; Jordanova, Ekaterina S.; de Miranda, Noel F. C. C.";;;;JOURNAL OF PATHOLOGY CLINICAL RESEARCH;JAN 2019;2019;5;1;;;;3;11;;10.1002/cjp2.113;;;7;3,5;0;0;0;0;0;0;0;0;0;5
Human bone marrow assessment by single-cell RNA sequencing, mass cytometry, and flow cytometry;"Oetjen, Karolyn A.; Lindblad, Katherine E.; Goswami, Meghali; Gui, Gege; Dagur, Pradeep K.; Lai, Catherine; Dillon, Laura W.; Mccoy, J. Philip; Hourigan, Christopher S.";;;;JCI INSIGHT;DEC 6 2018;2018;3;23;;;;;;e124928;10.1172/jci.insight.124928;;;7;2,33;0;0;0;0;0;0;0;0;0;2
Cotargeting Ephrin Receptor Tyrosine Kinases A2 and A3 in Cancer Stem Cells Reduces Growth of Recurrent Glioblastoma;"Qazi, Maleeha A.; Vora, Parvez; Venugopal, Chitra; Adams, Jarrett; Singh, Mohini; Hu, Amy; Gorelik, Maryna; Subapanditha, Minomi K.; Savage, Neil; Yang, Jiahe; Chokshi, Chirayu; London, Max; Gont, Alexander; Bobrowski, David; Grinshtein, Natalie; Brown, Kevin R.; Murty, Naresh K.; Nilvebrant, Johan; Kaplan, David; Moffat, Jason; Sidhu, Sachdev; Singh, Sheila K.";;;;CANCER RESEARCH;SEP 1 2018;2018;78;17;;;;5023;5037;;10.1158/0008-5472.CAN-18-0267;;;7;2,33;0;0;0;0;0;0;0;0;1;3
Background fluorescence and spreading error are major contributors of variability in high-dimensional flow cytometry data visualization by t-distributed stochastic neighboring embedding;"Mazza, Emilia Maria Cristina; Brummelman, Jolanda; Alvisi, Giorgia; Roberto, Alessandra; De Paoli, Federica; Zanon, Veronica; Colombo, Federico; Roederer, Mario; Lugli, Enrico";;;;CYTOMETRY PART A;AUG 2018;2018;93A;8;;;;785;792;;10.1002/cyto.a.23566;;;7;2,33;0;0;0;0;0;0;0;0;0;4
Ovarian cancer cells cisplatin sensitization agents selected by mass cytometry target ABCC2 inhibition;"Comsa, Elisabeta; Kim-Anh Nguyen; Loghin, Felicia; Boumendjel, Ahcene; Peuchmaur, Marine; Andrieu, Thibault; Falson, Pierre";;;;FUTURE MEDICINAL CHEMISTRY;JUN 2018;2018;10;11;;;;1349;1360;;10.4155/fmc-2017-0308;;;7;2,33;0;0;0;0;0;0;0;0;1;5
Functional screening of FGFR4-driven tumorigenesis identifies PI3K/mTOR inhibition as a therapeutic strategy in rhabdomyosarcoma;"McKinnon, Timothy; Venier, Rosemarie; Yohe, Marielle; Sindiri, Sivasish; Gryder, Berkley E.; Shern, Jack F.; Kabaroff, Leah; Dickson, Brendan; Schleicher, Krista; Chouinard-Pelletier, Guillaume; Menezes, Serena; Gupta, Abha; Zhang, Xiaohu; Guha, Rajarashi; Ferrer, Marc; Thomas, Craig J.; Wei, Yuhong; Davani, Dariush; Guidos, Cynthia J.; Khan, Javed; Gladdy, Rebecca A.";;;;ONCOGENE;MAY 2018;2018;37;20;;;;2630;2644;;10.1038/s41388-017-0122-y;;;7;2,33;0;0;0;0;0;0;0;0;1;5
Analysis of cell surface and intranuclear markers on non-stimulated human PBMC using mass cytometry;"Dzangue-Tchoupou, Gaelle; Corneau, Aurelien; Blanc, Catherine; Benveniste, Olivier; Allenbach, Yves";;;;PLOS ONE;MAR 22 2018;2018;13;3;;;;;;e0194593;10.1371/journal.pone.0194593;;;7;2,33;0;0;0;0;0;0;0;0;0;6
Combined aptamer and transcriptome sequencing of single cells;"Delley, Cyrille L.; Liu, Leqian; Sarhan, Maen F.; Abate, Adam R.";;;;SCIENTIFIC REPORTS;FEB 13 2018;2018;8;;;;;;;2919;10.1038/s41598-018-21153-y;;;7;2,33;0;0;0;0;0;0;0;0;1;6
Integrated functional and mass spectrometry-based flow cytometric phenotyping to describe the immune microenvironment in acute myeloid leukemia;"Lamble, Adam J.; Dietz, Matthew; Laderas, Ted; McWeeney, Shannon; Lind, Evan F.";;;;JOURNAL OF IMMUNOLOGICAL METHODS;FEB 2018;2018;453;;;;SI;44;52;;10.1016/j.jim.2017.11.010;;;7;2,33;0;0;0;0;0;0;0;0;0;5
Cytofast: A workflow for visual and quantitative analysis of flow andmass cytometry data to discover immune signatures and correlations;"Beyrend, Guillaume; Stam, Koen; Hollt, Thomas; Ossendorp, Ferry; Arens, Ramon";;;;COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL;2018;2018;16;;;;;435;442;;10.1016/j.csbj.2018.10.004;;;7;2,33;0;0;0;0;0;0;0;0;0;3
Cell Cycle Analysis by Mass Cytometry;Behbehani, Gregory K.;;;Lacorazza, HD;CELLULAR QUIESCENCE: METHODS AND PROTOCOLS;2018;2018;1686;;;;;105;124;;10.1007/978-1-4939-7371-2_8;;;7;2,33;0;0;0;0;0;0;0;0;2;4
Influence of Lu3+ Doping on the Crystal Structure of Uniform Small (5 and 13 nm) NaLnF(4) Upconverting Nanocrystals;"Lu, Elsa; Pichaandi, Jothirmayanantham; Arnett, Loryn P.; Tong, Lemuel; Winnik, Mitchell A.";;;;JOURNAL OF PHYSICAL CHEMISTRY C;AUG 24 2017;2017;121;33;;;;18178;18185;;10.1021/acs.jpcc.7b03783;;;7;1,75;0;0;0;0;0;0;0;0;4;2
Current Advances in Highly Multiplexed Antibody-Based Single-Cell Proteomic Measurements;"Huang, Lu; Michael, Sean A.; Chen, Yangfan; Wu, Hongkai";;;;CHEMISTRY-AN ASIAN JOURNAL;JUL 18 2017;2017;12;14;;;;1680;1691;;10.1002/asia.201700404;;;7;1,75;0;0;0;0;0;0;0;0;4;3
In silico modeling identifies CD45 as a regulator of IL-2 synergy in the NKG2D-mediated activation of immature human NK cells;"Mukherjee, Sayak; Jensen, Helle; Stewart, William; Stewart, David; Ray, William C.; Chen, Shih-Yu; Nolan, Garry P.; Lanier, Lewis L.; Das, Jayajit";;;;SCIENCE SIGNALING;JUN 27 2017;2017;10;485;;;;;;eaai9062;10.1126/scisignal.aai9062;;;7;1,75;0;0;0;0;0;0;0;1;2;2
Cell Expansion During Directed Differentiation of Stem Cells Toward the Hepatic Lineage;"Raju, Ravali; Chau, David; Cho, Dong Seong; Park, Yonsil; Verfaillie, Catherine M.; Hu, Wei-Shou";;;;STEM CELLS AND DEVELOPMENT;FEB 15 2017;2017;26;4;;;;274;284;;10.1089/scd.2016.0119;;;7;1,75;0;0;0;0;0;0;0;1;2;3
Exploring Glucocorticoid Receptor Agonists Mechanism of Action Through Mass Cytometry and Radial Visualizations;"Abraham, Yann; Gerrits, Bertran; Ludwig, Marie-Gabrielle; Rebhan, Michael; Keller, Caroline Gubser";;;;CYTOMETRY PART B-CLINICAL CYTOMETRY;JAN 2017;2017;92;1;;;SI;42;56;;10.1002/cyto.b.21499;;;7;1,75;0;0;0;0;0;0;0;4;1;2
Hybrid Imaging Labels: Providing the Link Between Mass Spectrometry-Based Molecular Pathology and Theranostics;"Buckle, Tessa; van der Wal, Steffen; van Malderen, Stijn J. M.; Mueller, Larissa; Kuil, Joeri; van Unen, Vincent; Peters, Ruud J. B.; van Bemmel, Margaretha E. M.; McDonnell, Liam A.; Velders, Aldrik H.; Koning, Frits; Vanhaecke, Frank; van Leeuwen, Fijs W. B.";;;;THERANOSTICS;2017;2017;7;3;;;;624;633;;10.7150/thno.17484;;;7;1,75;0;0;0;0;0;0;0;0;1;5
Mass cytometry reveals a distinct immunoprofile of operational tolerance in pediatric liver transplantation;"Lau, Audrey H.; Vitalone, Matthew J.; Haas, Kelly; Shawler, Todd; Esquivel, Carlos O.; Berquist, William E.; Martinez, Olivia M.; Castillo, Ricardo O.; Krams, Sheri M.";;;;PEDIATRIC TRANSPLANTATION;DEC 2016;2016;20;8;;;;1072;1080;;10.1111/petr.12795;;;7;1,4;0;0;0;0;0;0;0;3;1;2
Retracing the in vivo haematopoietic tree using single-cell methods;"Perie, Leila; Duffy, Ken R.";;;;FEBS LETTERS;NOV 2016;2016;590;22;;;SI;4068;4083;;10.1002/1873-3468.12299;;;7;1,4;0;0;0;0;0;0;1;1;2;2
Signaling effects of sodium hydrosulfide in healthy donor peripheral blood mononuclear cells;"Sulen, Andre; Gullaksen, Stein-Erik; Bader, Lucius; McClymont, David W.; Skavland, Jorn; Gavasso, Sonia; Gjertsen, Bjorn T.";;;;PHARMACOLOGICAL RESEARCH;NOV 2016;2016;113;;A;;;216;227;;10.1016/j.phrs.2016.08.018;;;7;1,4;0;0;0;0;0;0;1;1;0;3
Signal Transduction at the Single-Cell Level: Approaches to Study the Dynamic Nature of Signaling Networks;"Handly, L. Naomi; Yao, Jason; Wollman, Roy";;;;JOURNAL OF MOLECULAR BIOLOGY;SEP 25 2016;2016;428;19;;;SI;3669;3682;;10.1016/j.jmb.2016.07.009;;;7;1,4;0;0;0;0;0;0;1;2;1;1
Emerging single-cell technologies for functional proteomics in oncology;"Wang, Jun; Yang, Fan";;;;EXPERT REVIEW OF PROTEOMICS;SEP 2016;2016;13;9;;;;805;815;;10.1080/14789450.2016.1215920;;;7;1,4;0;0;0;0;0;0;0;3;2;2
Single-cell states versus single-cell atlases - two classes of heterogeneity that differ in meaning and method;Janes, Kevin A.;;;;CURRENT OPINION IN BIOTECHNOLOGY;JUN 2016;2016;39;;;;;120;125;;10.1016/j.copbio.2016.03.015;;;7;1,4;0;0;0;0;0;0;0;2;0;5
The niche in single-cell technologies;Donati, Giacomo;;;;IMMUNOLOGY AND CELL BIOLOGY;MAR 2016;2016;94;3;;;;250;255;;10.1038/icb.2015.107;;;7;1,4;0;0;0;0;0;0;1;2;2;2
Hybrid Microgels with Confined Needle-like Lanthanide Phosphate Nanocrystals;"Tehrani, Sepehr Mastour; Lin, Wanjuan; Rosenfeld, Sabine; Guerin, Gerald; Lu, Yijie; Liang, Yi; Drechsler, Markus; Foerster, Stephan; Winnik, Mitchell A.";;;;CHEMISTRY OF MATERIALS;JAN 26 2016;2016;28;2;;;;501;510;;10.1021/acs.chemmater.5b03295;;;7;1,4;0;0;0;0;0;0;2;3;1;1
Immune monitoring technology primer: flow and mass cytometry;"Maecker, Holden T.; Harari, Alexandre";;;;JOURNAL FOR IMMUNOTHERAPY OF CANCER;SEP 15 2015;2015;3;;;;;;;UNSP 44;10.1186/s40425-015-0085-x;;;7;1,17;0;0;0;0;0;0;1;3;2;1
Mass Cytometry to Decipher the Mechanism of Nongenetic Drug Resistance in Cancer;"Fienberg, Harris G.; Nolan, Garry P.";;;"Fienberg, HG; Nolan, GP";HIGH-DIMENSIONAL SINGLE CELL ANALYSIS: MASS CYTOMETRY, MULTI-PARAMETRIC FLOW CYTOMETRY AND BIOINFORMATIC TECHNIQUES;2014;2014;377;;;;;85;94;;10.1007/82_2014_365;;;7;1;0;0;0;0;0;3;1;2;0;1
The release and extraction of lanthanide ions from metal-encoded poly (styrene-co-methacrylic acid) microspheres;"Liang, Yi; Abdelrahman, Ahmed I.; Baranov, Vladimir; Winnik, Mitchell A.";;;;POLYMER;FEB 17 2012;2012;53;4;;;;998;1004;;10.1016/j.polymer.2011.12.031;;;7;0,78;0;0;0;3;3;0;0;1;0;0
Mapping microglia states in the human brain through the integration of high-dimensional techniques;"Sankowski, Roman; Bottcher, Chotima; Masuda, Takahiro; Geirsdottir, Laufey; Sagar; Sindram, Elena; Seredenina, Tamara; Muhs, Andreas; Scheiwe, Christian; Shah, Mukesch Johannes; Heiland, Dieter Henrik; Schnell, Oliver; Grun, Dominic; Priller, Josef; Prinz, Marco";;;;NATURE NEUROSCIENCE;DEC 2019;2019;22;12;;;;2098;+;;10.1038/s41593-019-0532-y;;;6;3;0;0;0;0;0;0;0;0;0;0
Exploring single-cell data with deep multitasking neural networks;"Amodio, Matthew; van Dijk, David; Srinivasan, Krishnan; Chen, William S.; Mohsen, Hussein; Moon, Kevin R.; Campbell, Allison; Zhao, Yujiao; Wang, Xiaomei; Venkataswamy, Manjunatha; Desai, Anita; Ravi, V.; Kumar, Priti; Montgomery, Ruth; Wolf, Guy; Krishnaswamy, Smita";;;;NATURE METHODS;NOV 2019;2019;16;11;;;;1139;+;;10.1038/s41592-019-0576-7;;;6;3;0;0;0;0;0;0;0;0;0;1
MIBI-TOF: A multiplexed imaging platform relates cellular phenotypes and tissue structure;"Keren, Leeat; Bosse, Marc; Thompson, Steve; Risom, Tyler; Vijayaragavan, Kausalia; McCaffrey, Erin; Marquez, Diana; Angoshtari, Roshan; Greenwald, Noah F.; Fienberg, Harris; Wang, Jennifer; Kambham, Neeraja; Kirkwood, David; Nolan, Garry; Montine, Thomas J.; Galli, Stephen J.; West, Robert; Bendall, Sean C.; Angelo, Michael";;;;SCIENCE ADVANCES;OCT 2019;2019;5;10;;;;;;eaax5851;10.1126/sciadv.aax5851;;;6;3;0;0;0;0;0;0;0;0;0;1
PD-L1 blockade engages tumor-infiltrating lymphocytes to co-express targetable activating and inhibitory receptors;"Beyrend, Guillaume; van der Gracht, Esme; Yilmaz, Ayse; van Duikeren, Suzanne; Camps, Marcel; Hollt, Thomas; Vilanova, Anna; van Unen, Vincent; Koning, Frits; de Miranda, Noel F. C. C.; Arens, Ramon; Ossendorp, Ferry";;;;JOURNAL FOR IMMUNOTHERAPY OF CANCER;AUG 14 2019;2019;7;1;;;;;;217;10.1186/s40425-019-0700-3;;;6;3;0;0;0;0;0;0;0;0;0;1
Label-free Mass Cytometry for Unveiling Cellular Metabolic Heterogeneity;"Yao, Huan; Zhao, Hansen; Zhao, Xu; Pan, Xingyu; Feng, Jiaxin; Xu, Fujian; Zhang, Sichun; Zhang, Xinrong";;;;ANALYTICAL CHEMISTRY;AUG 6 2019;2019;91;15;;;;9777;9783;;10.1021/acs.analchem.9b01419;;;6;3;0;0;0;0;0;0;0;0;0;2
Cell type-dependent differential activation of ERK by oncogenic KRAS in colon cancer and intestinal epithelium;"Brandt, Raphael; Sell, Thomas; Luethen, Mareen; Uhlitz, Florian; Klinger, Bertram; Riemer, Pamela; Giesecke-Thiel, Claudia; Schulze, Silvia; El-Shimy, Ismail Amr; Kunkel, Desiree; Fauler, Beatrix; Mielke, Thorsten; Mages, Norbert; Herrmann, Bernhard G.; Sers, Christine; Bluethgen, Nils; Morkel, Markus";;;;NATURE COMMUNICATIONS;JUL 2 2019;2019;10;;;;;;;2919;10.1038/s41467-019-10954-y;;;6;3;0;0;0;0;0;0;0;0;0;1
Mass cytometry reveals systemic and local immune signatures that distinguish inflammatory bowel diseases;"Rubin, Samuel J. S.; Bai, Lawrence; Haileselassie, Yeneneh; Garay, Gotzone; Yun, Chohee; Becker, Laren; Streett, Sarah E.; Sinha, Sidhartha R.; Habtezion, Aida";;;;NATURE COMMUNICATIONS;JUN 19 2019;2019;10;;;;;;;2686;10.1038/s41467-019-10387-7;;;6;3;0;0;0;0;0;0;0;0;0;3
Multiplexed (18-Plex) Measurement of Signaling Targets and Cytotoxic T Cells in Trastuzumab-Treated Patients using Imaging Mass Cytometry;"Carvajal-Hausdorf, Daniel E.; Patsenker, Jonathan; Stanton, Kelly P.; Villarroel-Espindola, Franz; Esch, Amanda; Montgomery, Ruth R.; Psyrri, Amanda; Kalogeras, Konstantine T.; Kotoula, Vassiliki; Foutzilas, George; Schalper, Kurt A.; Kluger, Yuval; Rimm, David L.";;;;CLINICAL CANCER RESEARCH;MAY 15 2019;2019;25;10;;;;3054;3062;;10.1158/1078-0432.CCR-18-2599;;;6;3;0;0;0;0;0;0;0;0;0;4
B cell profiling in malaria reveals expansion and remodeling of CD11c(+) B cell subsets;"Sundling, Christopher; Ronnberg, Caroline; Yman, Victor; Asghar, Muhammad; Jahnmatz, Peter; Lakshmikanth, Tadepally; Chen, Yang; Mikes, Jaromir; Forsell, Mattias N.; Sonden, Klara; Achour, Adnane; Brodin, Petter; Persson, Kristina E. M.; Farnert, Anna";;;;JCI INSIGHT;MAY 2 2019;2019;4;9;;;;;;e126492;10.1172/jci.insight.126492;;;6;3;0;0;0;0;0;0;0;0;0;3
TePhe, a tellurium-containing phenylalanine mimic, allows monitoring of protein synthesis in vivo with mass cytometry;"Bassan, Jay; Willis, Lisa M.; Vellanki, Ravi N.; Nguyen, Alan; Edgar, Landon J.; Wouters, Bradly G.; Nitz, Mark";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;APR 23 2019;2019;116;17;;;;8155;8160;;10.1073/pnas.1821151116;;;6;3;0;0;0;0;0;0;0;0;0;4
Mass synaptometry: High-dimensional multi parametric assay for single synapses;"Gajera, Chandresh R.; Fernandez, Rosemary; Postupna, Nadia; Montine, Kathleen S.; Fox, Edward J.; Tebaykin, Dmitry; Angelo, Michael; Bendall, Sean C.; Keene, C. Dirk; Montine, Thomas J.";;;;JOURNAL OF NEUROSCIENCE METHODS;JAN 15 2019;2019;312;;;;;73;83;;10.1016/j.jneumeth.2018.11.008;;;6;3;0;0;0;0;0;0;0;0;0;5
Accurate quantification of T-cells expressing PD-1 in patients on anti-PD-1 immunotherapy;"Zelba, Henning; Bochem, Jonas; Pawelec, Graham; Garbe, Claus; Wistuba-Hamprecht, Kilian; Weide, Benjamin";;;;CANCER IMMUNOLOGY IMMUNOTHERAPY;DEC 2018;2018;67;12;;;;1845;1851;;10.1007/s00262-018-2244-7;;;6;2;0;0;0;0;0;0;0;0;0;3
Immune and metabolic shifts during neonatal development reprogram liver identity and function;"Nakagaki, Brenda Naemi; Mafra, Kassiana; de Carvalho, Erika; Lopes, Mateus Eustaquio; Carvalho-Gontijo, Raquel; de Castro-Oliveira, Hortencia Maciel; Campolina-Silva, Gabriel Henrique; Moreira de Miranda, Camila Dutra; Antunes, Maisa Mota; Carvalho Silva, Ana Carolina; Diniz, Ariane Barros; Alvarenga, Debora Moreira; Freitas Lopes, Maria Alice; de Souza Lacerda, Viviane Aparecida; Mattos, Matheus Silverio; Araujo, Alan Moreira; Teixeira Vidigal, Paula Vieira; Lima, Cristiano Xavier; Mahecha, German A. B.; Moreira Madeira, Mila Fernandes; Fernandes, Gabriel Rocha; Nogueira, Raquel Ferraz; Moreira, Thais Garcias; David, Bruna Araujo; Rezende, Rafael Machado; Menezes, Gustavo Batista";;;;JOURNAL OF HEPATOLOGY;DEC 2018;2018;69;6;;;;1294;1307;;10.1016/j.jhep.2018.08.018;;;6;2;0;0;0;0;0;0;0;0;0;4
In-depth phenotypic characterization of reticulocyte maturation using mass cytometry;"Thomson-Luque, Richard; Wang, Chengqi; Ntumngia, Francis B.; Xu, Shulin; Szekeres, Karoly; Conway, Amy; Adapa, Swamy Rakesh; Barnes, Samantha J.; Adams, John H.; Jiang, Rays H. Y.";;;;BLOOD CELLS MOLECULES AND DISEASES;SEP 2018;2018;72;;;;;22;33;;10.1016/j.bcmd.2018.06.004;;;6;2;0;0;0;0;0;0;0;0;0;3
Mass Cytometry Reveals Distinct Platelet Subtypes in Healthy Subjects and Novel Alterations in Surface Glycoproteins in Glanzmann Thrombasthenia;"Blair, Thomas A.; Michelson, Alan D.; Frelinger, Andrew L., III";;;;SCIENTIFIC REPORTS;JUL 9 2018;2018;8;;;;;;;10300;10.1038/s41598-018-28211-5;;;6;2;0;0;0;0;0;0;0;0;0;6
Highly Multiplexed Single-Cell Protein Analysis;"Mondal, Manas; Liao, Renjie; Guo, Jia";;;;CHEMISTRY-A EUROPEAN JOURNAL;MAY 17 2018;2018;24;28;;;;7083;7091;;10.1002/chem.201705014;;;6;2;0;0;0;0;0;0;0;0;1;3
Alternatives to current flow cytometry data analysis for clinical and research studies;"Gondhalekar, Carmen; Rajwa, Bartek; Patsekin, Valery; Ragheb, Kathy; Sturgis, Jennifer; Robinson, J. Paul";;;;METHODS;FEB 1 2018;2018;134;;;;;113;129;;10.1016/j.ymeth.2017.12.009;;;6;2;0;0;0;0;0;0;0;0;4;1
Evidence of microglial activation following exposure to serum from first-onset drug-naive schizophrenia patients;"van Rees, Geertje Frederique; Lago, Santiago Guillermo; Cox, David Alan; Tomasik, Jakub; Rustogi, Nitin; Weigelt, Karin; Ozcan, Sureyya; Cooper, Jason; Drexhage, Hemmo; Leweke, F. Markus; Bahn, Sabine";;;;BRAIN BEHAVIOR AND IMMUNITY;JAN 2018;2018;67;;;;;364;373;;10.1016/j.bbi.2017.10.003;;;6;2;0;0;0;0;0;0;0;0;1;5
Leveraging blood and tissue CD4+T cell heterogeneity at the single cell level to identify mechanisms of disease in rheumatoid arthritis;"Fonseka, Chamith Y.; Rao, Deepak A.; Raychaudhuri, Soumya";;;;CURRENT OPINION IN IMMUNOLOGY;DEC 2017;2017;49;;;;;27;36;;10.1016/j.coi.2017.08.005;;;6;1,5;0;0;0;0;0;0;0;0;5;1
Human regulatory T cells undergo self-inflicted damage via granzyme pathways upon activation;"Karreci, Esilida Sula; Eskandari, Siawosh K.; Dotiwala, Farokh; Routray, Sujit K.; Kurdi, Ahmed T.; Assaker, Jean Pierre; Luckyanchykov, Pavlo; Mihali, Albana B.; Maarouf, Omar; Borges, Thiago J.; Alkhudhayri, Abdullah; Patel, Kruti R.; Radwan, Amr; Ghobrial, Irene; McGrath, Martina; Chandraker, Anil; Riella, Leonardo V.; Elyaman, Wassim; Abdi, Reza; Lieberman, Judy; Azzi, Jamil";;;;JCI INSIGHT;NOV 21 2017;2017;2;21;;;;;;e91599;10.1172/jci.insight.91599;;;6;1,5;0;0;0;0;0;0;0;0;0;4
Targeting P-selectin blocks neuroblastoma growth;"Nolo, Riitta; Herbrich, Shelley; Rao, Arvind; Zweidler-McKay, Patrick; Kannan, Sankaranarayanan; Gopalakrishnan, Vidya";;;;ONCOTARGET;OCT 17 2017;2017;8;49;;;;86657;86670;;10.18632/oncotarget.21364;;;6;1,5;0;0;0;0;0;0;0;0;2;3
Determining T-cell specificity to understand and treat disease;"Hadrup, Sine Reker; Newell, Evan W.";;;;NATURE BIOMEDICAL ENGINEERING;OCT 2017;2017;1;10;;;;784;795;;10.1038/s41551-017-0143-4;;;6;1,5;0;0;0;0;0;0;0;0;3;3
Resistance to immunotherapy: clouds in a bright sky;Milano, Gerard;;;;INVESTIGATIONAL NEW DRUGS;OCT 2017;2017;35;5;;;;649;654;;10.1007/s10637-017-0456-x;;;6;1,5;0;0;0;0;0;0;0;1;2;1
NKG2D ligand expression in Crohn's disease and NKG2D-dependent stimulation of CD8(+) T cell migration;"Vadstrup, Kasper; Galsgaard, Elisabeth Douglas; Jensen, Helle; Lanier, Lewis L.; Ryan, James C.; Chen, Shih-Yu; Nolan, Garry P.; Vester-Andersen, Marianne Kajbaek; Pedersen, Julie Steen; Gerwien, Jens; Jensen, Teis; Bendtsen, Flemming";;;;EXPERIMENTAL AND MOLECULAR PATHOLOGY;AUG 2017;2017;103;1;;;;56;70;;10.1016/j.yexmp.2017.06.010;;;6;1,5;0;0;0;0;0;0;0;1;4;1
Multiplexed ion beam imaging analysis for quantitation of protein expresssion in cancer tissue sections;"Rost, Sandra; Giltnane, Jennifer; Bordeaux, Jennifer M.; Hitzman, Chuck; Koeppen, Hartmut; Liu, Scot D.";;;;LABORATORY INVESTIGATION;AUG 2017;2017;97;8;;;;992;1003;;10.1038/labinvest.2017.50;;;6;1,5;0;0;0;0;0;0;0;1;2;2
Phenotypic and functional characterization of a bortezomib-resistant multiple myeloma cell line by flow and mass cytometry;"Baughn, Linda B.; Sachs, Zohar; Noble-Orcutt, Klara E.; Mitra, Amit; Van Ness, Brian G.; Linden, Michael A.";;;;LEUKEMIA & LYMPHOMA;AUG 2017;2017;58;8;;;;1931;1940;;10.1080/10428194.2016.1266621;;;6;1,5;0;0;0;0;0;0;0;0;4;1
Clustering Single-Cell Expression Data Using Random Forest Graphs;"Pouyan, Maziyar Baran; Nourani, Mehrdad";;;;IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS;JUL 2017;2017;21;4;;;;1172;1181;;10.1109/JBHI.2016.2565561;;;6;1,5;0;0;0;0;0;0;0;0;4;2
High Dimensional Cytometry of Central Nervous System Leukocytes During Neuroinflammation;"Mrdjen, Dunja; Hartmann, Felix J.; Becher, Burkhard";;;"Clausen, BE; Laman, JD";INFLAMMATION: METHODS AND PROTOCOLS;2017;2017;1559;;;;;321;332;;10.1007/978-1-4939-6786-5_22;;;6;1,5;0;0;0;0;0;0;0;1;4;0
Dynamic interactions of Plasmodium spp. with vascular endothelium;"Gillrie, Mark R.; Ho, May";;;;TISSUE BARRIERS;2017;2017;5;1;;;;;;e1268667;10.1080/21688370.2016.1268667;;;6;1,5;0;0;0;0;0;0;0;1;1;4
Peptide-Au Cluster Probe: Precisely Detecting Epidermal Growth Factor Receptor of Three Tumor Cell Lines at a Single-Cell Level;"Zhai, Jiao; Zhao, Lina; Zheng, Lingna; Gao, Fuping; Gao, Liang; Liu, Ru; Wang, Yaling; Gao, Xueyun";;;;ACS OMEGA;JAN 2017;2017;2;1;;;;276;282;;10.1021/acsomega.6b00390;;;6;1,5;0;0;0;0;0;0;0;0;2;2
Output without input: the lifelong productivity of hematopoietic stem cells;"Hoefer, Thomas; Rodewald, Hans-Reimer";;;;CURRENT OPINION IN CELL BIOLOGY;DEC 2016;2016;43;;;;;69;77;;10.1016/j.ceb.2016.08.003;;;6;1,2;0;0;0;0;0;0;0;1;2;2
Myelodysplastic Syndrome Revealed by Systems Immunology in a Melanoma Patient Undergoing Anti-PD-1 Therapy;"Greenplate, Allison R.; Johnson, Douglas B.; Roussel, Mikael; Savona, Michael R.; Sosman, Jeffrey A.; Puzanov, Igor; Ferrell, P. Brent, Jr.; Irish, Jonathan M.";;;;CANCER IMMUNOLOGY RESEARCH;JUN 2016;2016;4;6;;;;474;480;;10.1158/2326-6066.CIR-15-0213;;;6;1,2;0;0;0;0;0;0;0;4;0;2
Role of Immune Aging in Susceptibility to West Nile Virus;"Yao, Yi; Montgomery, Ruth R.";;;Colpitts, TM;WEST NILE VIRUS: METHODS AND PROTOCOLS;2016;2016;1435;;;;;235;247;;10.1007/978-1-4939-3670-0_18;;;6;1,2;0;0;0;0;0;0;0;1;4;1
Emerging proteomic technologies for elucidating context-dependent cellular signaling events: A big challenge of tiny proportions;"Parker, Sarah J.; Raedschelders, Koen; Van Eyk, Jennifer E.";;;;PROTEOMICS;MAY 2015;2015;15;9;;;;1486;1502;;10.1002/pmic.201400448;;;6;1;0;0;0;0;0;1;2;0;3;0
Multidimensional Profiling in the Investigation of Small-Molecule-Induced Cell Death;"Wolpaw, Adam J.; Stockwell, Brent R.";;;"Ashkenazi, A; Wells, JA; Yuan, J";REGULATED CELL DEATH, PT B: NECROPTOTIC, AUTOPHAGIC AND OTHER NON-APOPTOTIC MECHANISMS;2014;2014;545;;;;;265;302;;10.1016/B978-0-12-801430-1.00011-1;;;6;0,86;0;0;0;0;0;0;3;0;1;2
Maturation of the Human Intestinal Immune System Occurs Early in Fetal Development;"Stras, Stephanie F.; Werner, Lael; Toothaker, Jessica M.; Olaloye, Oluwabunmi O.; Oldham, Austin L.; McCourt, Collin C.; Lee, Yu Nee; Rechavi, Erez; Shouval, Dror S.; Konnikova, Liza";;;;DEVELOPMENTAL CELL;NOV 4 2019;2019;51;3;;;;357;+;;10.1016/j.devcel.2019.09.008;;;5;2,5;0;0;0;0;0;0;0;0;0;0
Integrin and transcriptomic profiles identify a distinctive synovial CD8+T cell subpopulation in spondyloarthritis;"Qaiyum, Zoya; Gracey, Eric; Yao, YuChen; Inman, Robert D.";;;;ANNALS OF THE RHEUMATIC DISEASES;NOV 2019;2019;78;11;;;;1566;1575;;10.1136/annrheumdis-2019-215349;;;5;2,5;0;0;0;0;0;0;0;0;0;1
High-resolution imaging and single-cell analysis via laser ablation-inductively coupled plasma-mass spectrometry for the determination of membranous receptor expression levels in breast cancer cell lines using receptor-specific hybrid tracers;"Van Acker, Thibaut; Buckle, Tessa; Van Malderen, Stijn J. M.; van Willigen, Danny M.; van Unen, Vincent; van Leeuwen, Fijs W. B.; Vanhaecke, Frank";;;;ANALYTICA CHIMICA ACTA;OCT 3 2019;2019;1074;;;;;43;53;;10.1016/j.aca.2019.04.064;;;5;2,5;0;0;0;0;0;0;0;0;0;3
Glutathione Might Attenuate Cadmium-Induced Liver Oxidative Stress and Hepatic Stellate Cell Activation;"Ren, Longfei; Qi, Kuo; Zhang, Lei; Bai, Zhongtian; Ren, Chenghui; Xu, Xianyun; Zhang, Zeliang; Li, Xun";;;;BIOLOGICAL TRACE ELEMENT RESEARCH;OCT 2019;2019;191;2;;;;443;452;;10.1007/s12011-019-1641-x;;;5;2,5;0;0;0;0;0;0;0;0;0;3
Cytokine production in myelofibrosis exhibits differential responsiveness to JAK-STAT, MAP kinase, and NF kappa B signaling;"Fisher, Daniel A. C.; Miner, Cathrine A.; Engle, Elizabeth K.; Hu, Hengrui; Collins, Taylor B.; Zhou, Amy; Allen, Maggie J.; Malkova, Olga N.; Oh, Stephen T.";;;;LEUKEMIA;AUG 2019;2019;33;8;;;;1978;1995;;10.1038/s41375-019-0379-y;;;5;2,5;0;0;0;0;0;0;0;0;0;2
T-cell exhaustion correlates with improved outcomes in kidney transplant recipients;"Fribourg, Miguel; Anderson, Lisa; Fischman, Clara; Cantarelli, Chiara; Perin, Laura; La Manna, Gaetano; Rahman, Adeeb; Burrell, Bryna E.; Heeger, Peter S.; Cravedi, Paolo";;;;KIDNEY INTERNATIONAL;AUG 2019;2019;96;2;;;;436;449;;10.1016/j.kint.2019.01.040;;;5;2,5;0;0;0;0;0;0;0;0;0;3
Comprehensive Immune Monitoring of Clinical Trials to Advance Human Immunotherapy;"Hartmann, Felix J.; Babdor, Joel; Gherardini, Pier Federico; Amir, El-Ad D.; Jones, Kyle; Sahaf, Bita; Marquez, Diana M.; Krutzik, Peter; O'Donnell, Erika; Sigal, Natalia; Maecker, Holden T.; Meyer, Everett; Spitzer, Matthew H.; Bendell, Sean C.";;;;CELL REPORTS;JUL 16 2019;2019;28;3;;;;819;+;;10.1016/j.celrep.2019.06.049;;;5;2,5;0;0;0;0;0;0;0;0;0;1
A Unique Presentation of Infantile-Onset Colitis and Eosinophilic Disease without Recurrent Infections Resulting from a Novel Homozygous CARMIL2 Variant;"Kurolap, Alina; Adiv, Orly Eshach; Konnikova, Liza; Werner, Lael; Gonzaga-Jauregui, Claudia; Steinberg, Maya; Mitsialis, Vanessa; Mory, Adi; Nunberg, Moran Y.; Wall, Sarah; Shaoul, Ron; Overton, John D.; Shuldiner, Alan R.; Zohar, Yaniv; Paperna, Tamar; Snapper, Scott B.; Shouval, Dror S.; Feldman, Hagit Baris";Regeneron Genetics Ctr;;;JOURNAL OF CLINICAL IMMUNOLOGY;MAY 2019;2019;39;4;;;;430;439;;10.1007/s10875-019-00631-6;;;5;2,5;0;0;0;0;0;0;0;0;0;1
Spatiotemporal Modeling of the Key Migratory Events During the Initiation of Adaptive Immunity;"Hayes, Alan J.; Rane, Sanket; Scales, Hannah E.; Meehan, Gavin R.; Benson, Robert A.; Maroof, Asher; Schroeder, Juliane; Tomura, Michio; Gozzard, Neil; Yates, Andrew J.; Garside, Paul; Brewer, James M.";;;;FRONTIERS IN IMMUNOLOGY;APR 5 2019;2019;10;;;;;;;598;10.3389/fimmu.2019.00598;;;5;2,5;0;0;0;0;0;0;0;0;0;4
A year-long immune profile of the systemic response in acute stroke survivors;"Tsai, Amy S.; Berry, Kacey; Beneyto, Maxime M.; Gaudilliere, Dyani; Ganio, Edward A.; Culos, Anthony; Ghaemi, Mohammad S.; Choisy, Benjamin; Djebali, Karim; Einhaus, Jakob F.; Bertrand, Basile; Tanada, Athena; Stanley, Natalie; Fallahzadeh, Ramin; Baca, Quentin; Quach, Lisa N.; Osborn, Elizabeth; Drag, Lauren; Lansberg, Maarten G.; Angst, Martin S.; Gaudilliere, Brice; Buckwalter, Marion S.; Aghaeepour, Nima";;;;BRAIN;APR 2019;2019;142;;4;;;978;991;;10.1093/brain/awz022;;;5;2,5;0;0;0;0;0;0;0;0;0;1
Lanthanide nanoparticles for high sensitivity multiparameter single cell analysis;"Pichaandi, Jothirmayanantham; Zhao, Guangyao; Bouzekri, Alexandre; Lu, Elsa; Ornatsky, Olga; Baranov, Vladimir; Nitz, Mark; Winnik, Mitchell A.";;;;CHEMICAL SCIENCE;MAR 14 2019;2019;10;10;;;;2965;2974;;10.1039/c8sc04407d;;;5;2,5;0;0;0;0;0;0;0;0;0;4
Parallel analysis of tri-molecular biosynthesis with cell identity and function in single cells;"Kimmey, Samuel C.; Borges, Luciene; Baskar, Reema; Bendall, Sean C.";;;;NATURE COMMUNICATIONS;MAR 12 2019;2019;10;;;;;;;1185;10.1038/s41467-019-09128-7;;;5;2,5;0;0;0;0;0;0;0;0;0;5
Deep Profiling of the CD8(+) T-cell Compartment Identifies Activated Cell Subsets and Multifunctional Responses Associated With Control of Cytomegalovirus Viremia;"Ferreira, Victor H.; Kumar, Deepali; Humar, Atul";;;;TRANSPLANTATION;MAR 2019;2019;103;3;;;;613;621;;10.1097/TP.0000000000002373;;;5;2,5;0;0;0;0;0;0;0;0;0;3
Multiplexed profiling of RNA and protein expression signatures in individual cells using flow or mass cytometry;"Duckworth, Andrew D.; Gherardini, Pier Federico; Sykorova, Martina; Yasin, Faten; Nolan, Garry P.; Slupsky, Joseph R.; Kalakonda, Nagesh";;;;NATURE PROTOCOLS;MAR 2019;2019;14;3;;;;901;920;;10.1038/s41596-018-0120-8;;;5;2,5;0;0;0;0;0;0;0;0;0;3
Systems immunology allows a new view on human dendritic cells;"Schultze, Joachim L.; Aschenbrenner, Anna C.";;;;SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY;FEB 2019;2019;86;;;;SI;15;23;;10.1016/j.semcdb.2018.02.017;;;5;2,5;0;0;0;0;0;0;0;0;2;3
Mass spectrometry and proteomics in hematology;"Rolland, Delphine C. M.; Lim, Megan S.; Elenitoba-Johnson, Kojo S. J.";;;;SEMINARS IN HEMATOLOGY;JAN 2019;2019;56;1;;;;52;57;;10.1053/j.seminhematol.2018.05.009;;;5;2,5;0;0;0;0;0;0;0;0;0;2
Life-Threatening Primary Varicella Zoster Virus Infection With Hemophagocytic Lymphohistiocytosis-Like Disease in GATA2 Haploinsufficiency Accompanied by Expansion of Double Negative T-Lymphocytes;"Prader, Seraina; Felber, Matthias; Volkmer, Benjamin; Truck, Johannes; Schwieger-Briel, Agnes; Theiler, Martin; Weibel, Lisa; Hambleton, Sophie; Seipel, Katja; Vavassori, Stefano; Schmid, Jana Pachlopnik";;;;FRONTIERS IN IMMUNOLOGY;DEC 3 2018;2018;9;;;;;;;2766;10.3389/fimmu.2018.02766;;;5;1,67;0;0;0;0;0;0;0;0;0;1
Proof of concept study of mass cytometry in septic shock patients reveals novel immune alterations;"Gossez, Morgane; Rimmele, Thomas; Andrieu, Thibault; Debord, Sophie; Bayle, Frederique; Malcus, Christophe; Poitevin-Later, Francoise; Monneret, Guillaume; Venet, Fabienne";;;;SCIENTIFIC REPORTS;NOV 23 2018;2018;8;;;;;;;17296;10.1038/s41598-018-35932-0;;;5;1,67;0;0;0;0;0;0;0;0;0;3
Metabololipidomic profiling of functional immunoresolvent clusters and eicosanoids in mammalian tissues;"Norris, Paul C.; Serhan, Charles N.";;;;BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS;OCT 7 2018;2018;504;3;;;SI;553;561;;10.1016/j.bbrc.2018.03.037;;;5;1,67;0;0;0;0;0;0;0;0;1;2
Identification and Analysis of Islet Antigen-Specific CD8(+) T Cells with T Cell Libraries;"Ogura, Hideki; Preston-Hurlburt, Paula; Perdigoto, Ana Luisa; Amodio, Matthew; Krishnaswamy, Smita; Clark, Pamela; Yu, Hua; Egli, Dieter; Fouts, Alexandra; Steck, Andrea K.; Herold, Kevan C.";;;;JOURNAL OF IMMUNOLOGY;SEP 15 2018;2018;201;6;;;;1662;1670;;10.4049/jimmunol.1800267;;;5;1,67;0;0;0;0;0;0;0;0;0;4
Baseline immune profile by CyTOF can predict response to an investigational adjuvanted vaccine in elderly adults;"Lingblom, Christine M. D.; Kowli, Sangeeta; Swaminathan, Nithya; Maecker, Holden T.; Lambert, Stacie L.";;;;JOURNAL OF TRANSLATIONAL MEDICINE;JUN 5 2018;2018;16;;;;;;;153;10.1186/s12967-018-1528-1;;;5;1,67;0;0;0;0;0;0;0;0;1;3
Modeling of cytometry data in logarithmic space: When is a bimodal distribution not bimodal?;"Erez, Amir; Vogel, Robert; Mugler, Andrew; Belmonte, Andrew; Altan-Bonnet, Gregoire";;;;CYTOMETRY PART A;JUN 2018;2018;93A;6;;;;611;619;;10.1002/cyto.a.23333;;;5;1,67;0;0;0;0;0;0;0;0;0;4
Individually addressable and dynamic DNA gates for multiplexed cell sorting;"Dahotre, Shreyas N.; Chang, Yun Min; Wieland, Andreas; Stammen, Samantha R.; Kwong, Gabriel A.";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;APR 24 2018;2018;115;17;;;;4357;4362;;10.1073/pnas.1714820115;;;5;1,67;0;0;0;0;0;0;0;0;0;3
High-Dimensional Phenotyping Identifies Age-Emergent Cells in Human Mammary Epithelia;"Vatter, Fanny A. Pelissier; Schapiro, Denis; Chang, Hang; Borowsky, Alexander D.; Lee, Jonathan K.; Parvin, Bahram; Stampfer, Martha R.; LaBarge, Mark A.; Bodenmiller, Bernd; Lorens, James B.";;;;CELL REPORTS;APR 24 2018;2018;23;4;;;;1205;1219;;10.1016/j.celrep.2018.03.114;;;5;1,67;0;0;0;0;0;0;0;0;1;4
Genomic Profiling of T-Cell Neoplasms Reveals Frequent JAK1 and JAK3 Mutations With Clonal Evasion From Targeted Therapies;"Greenplate, Allison; Wang, Kai; Tripathi, Rati M.; Palma, Norma; Ali, Siraj M.; Stephens, Phil J.; Miller, Vincent A.; Shyr, Yu; Guo, Yan; Reddy, Nishitha M.; Kozhaya, Lina; Unutmaz, Derya; Chen, Xueyan; Irish, Jonathan M.; Dave, Utpal P.";;;;JCO PRECISION ONCOLOGY;FEB 13 2018;2018;2;;;;;;;;10.1200/PO.17.00019;;;5;1,67;0;0;0;0;0;0;0;0;0;4
Average Overlap Frequency: A simple metric to evaluate staining quality and community identification in high dimensional mass cytometry experiments;"Amir, El-ad David; Guo, Xinzheng V.; Mayovska, Oksana; Rahman, Adeeb H.";;;;JOURNAL OF IMMUNOLOGICAL METHODS;FEB 2018;2018;453;;;;SI;20;29;;10.1016/j.jim.2017.08.011;;;5;1,67;0;0;0;0;0;0;0;0;0;4
Using flow cytometry to monitor glycoprotein IIb-IIIa activation;Frelinger, Andrew L., III;;;;PLATELETS;2018;2018;29;7;;;;670;676;;10.1080/09537104.2018.1478073;;;5;1,67;0;0;0;0;0;0;0;0;0;3
Application and utility of mass cytometry in vaccine development;"Reeves, Patrick M.; Sluder, Ann E.; Paul, Susan Raju; Scholzen, Anja; Kashiwagi, Satoshi; Poznansky, Mark C.";;;;FASEB JOURNAL;JAN 2018;2018;32;1;;;;5;15;;10.1096/fj.201700325R;;;5;1,67;0;0;0;0;0;0;0;0;3;2
Simultaneous Detection of Protein and mRNA in Jurkat and KG-1a Cells by Mass Cytometry;"Mavropoulos, Anastasia; Allo, Bedilu; He, Mingxiao; Park, Emily; Majonis, Daniel; Ornatsky, Olga";;;;CYTOMETRY PART A;DEC 2017;2017;91A;12;;;;1200;1208;;10.1002/cyto.a.23281;;;5;1,25;0;0;0;0;0;0;0;0;2;2
An Optimized and Validated Method for Isolation and Characterization of Lymphocytes from HIV plus Human Gut Biopsies;"Trapecar, Martin; Khan, Shahzada; Roan, Nadia R.; Chen, Tsui-Hua; Telwatte, Sushama; Deswal, Monika; Pao, Montha; Somsouk, Ma; Deeks, Steven G.; Hunt, Peter W.; Yukl, Steven; Sanjabi, Shomyseh";;;;AIDS RESEARCH AND HUMAN RETROVIRUSES;NOV 2017;2017;33;;;1;SI;S31;S39;;10.1089/aid.2017.0208;;;5;1,25;0;0;0;0;0;0;0;0;2;1
Convex clustering via l(1) fusion penalization;"Radchenko, Peter; Mukherjee, Gourab";;;;JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY;NOV 2017;2017;79;5;;;;1527;1546;;10.1111/rssb.12223;;;5;1,25;0;0;0;0;0;0;0;0;0;5
Deep Immune Profiling of an Arginine-Enriched Nutritional Intervention in Patients Undergoing Surgery;"Aghaeepour, Nima; Kin, Cindy; Ganio, Edward A.; Jensen, Kent P.; Gaudilliere, Dyani K.; Tingle, Martha; Tsai, Amy; Lancero, Hope L.; Choisy, Benjamin; McNeil, Leslie S.; Okada, Robin; Shelton, Andrew A.; Nolan, Garry P.; Angst, Martin S.; Gaudilliere, Brice L.";;;;JOURNAL OF IMMUNOLOGY;SEP 15 2017;2017;199;6;;;;2171;2180;;10.4049/jimmunol.1700421;;;5;1,25;0;0;0;0;0;0;0;0;1;2
Immunological Prediction of Cytomegalovirus (CMV) Replication Risk in Solid Organ Transplantation Recipients: Approaches for Regulating the Targeted Anti-CMV Prevention Strategies;Han, Sang Hoon;;;;INFECTION AND CHEMOTHERAPY;SEP 2017;2017;49;3;;;;161;175;;10.3947/ic.2017.49.3.161;;;5;1,25;0;0;0;0;0;0;0;0;3;2
A beta-galactosidase probe for the detection of cellular senescence by mass cytometry;"Lumba, M. A.; Willis, L. M.; Santra, S.; Rana, R.; Schito, L.; Rey, S.; Wouters, B. G.; Nitz, M.";;;;ORGANIC & BIOMOLECULAR CHEMISTRY;AUG 14 2017;2017;15;30;;;;6388;6392;;10.1039/c7ob01227f;;;5;1,25;0;0;0;0;0;0;0;0;2;3
Pregnane X receptor is associated with unfavorable survival and induces chemotherapeutic resistance by transcriptional activating multidrug resistance-related protein 3 in colorectal cancer;"Dong, Yan; Wang, Zhe; Xie, Gan-feng; Li, Chong; Zuo, Wen-wei; Meng, Gang; Xu, Cheng-ping; Li, Jian-jun";;;;MOLECULAR CANCER;MAR 29 2017;2017;16;;;;;;;71;10.1186/s12943-017-0641-8;;;5;1,25;0;0;0;0;0;0;0;0;2;2
Automation of sample preparation for mass cytometry barcoding in support of clinical research: protocol optimization;"Nassar, Ala F.; Wisnewski, Adam V.; Raddassi, Khadir";;;;ANALYTICAL AND BIOANALYTICAL CHEMISTRY;MAR 2017;2017;409;9;;;;2363;2372;;10.1007/s00216-017-0182-4;;;5;1,25;0;0;0;0;0;0;0;1;2;0
On the relationship between cell cycle analysis with ergodic principles and age-structured cell population models;"Kuritz, K.; Stoehr, D.; Pollak, N.; Allgoewer, F.";;;;JOURNAL OF THEORETICAL BIOLOGY;FEB 7 2017;2017;414;;;;;91;102;;10.1016/j.jtbi.2016.11.024;;;5;1,25;0;0;0;0;0;0;0;1;1;2
Sparse Regression Based Structure Learning of Stochastic Reaction Networks from Single Cell Snapshot Time Series;"Klimovskaia, Anna; Ganscha, Stefan; Claassen, Manfred";;;;PLOS COMPUTATIONAL BIOLOGY;DEC 2016;2016;12;12;;;;;;e1005234;10.1371/journal.pcbi.1005234;;;5;1;0;0;0;0;0;0;0;0;1;3
AirLab: a cloud-based platform to manage and share antibody-based single-cell research;"Catena, Raul; Ozcan, Alaz; Jacobs, Andrea; Chevrier, Stephane; Bodenmiller, Bernd";;;;GENOME BIOLOGY;JUN 29 2016;2016;17;;;;;;;142;10.1186/s13059-016-1006-0;;;5;1;0;0;0;0;0;0;0;3;0;2
Cell-secreted signals shape lymphoma identity;"Gloghini, Annunziata; Bongarzone, Italia";;;;SEMINARS IN CANCER BIOLOGY;OCT 2015;2015;34;;;;;81;91;;10.1016/j.semcancer.2015.02.001;;;5;0,83;0;0;0;0;0;1;1;0;0;2
Flow Cytometry for Hematopoietic Cells;"Krause, Daniela S.; DeLelys, Michelle E.; Preffer, Frederic I.";;;Beksac, M;BONE MARROW AND STEM CELL TRANSPLANTATION, 2ND EDITION;2014;2014;1109;;;;;23;46;;10.1007/978-1-4614-9437-9_2;;;5;0,71;0;0;0;0;0;1;0;3;1;0
Systems approaches to human autoimmune diseases;"Banchereau, Romain; Cepika, Alma-Martina; Pascual, Virginia";;;;CURRENT OPINION IN IMMUNOLOGY;OCT 2013;2013;25;5;;;;598;605;;10.1016/j.coi.2013.08.005;;;5;0,63;0;0;0;0;1;1;0;0;0;2
PD-1H (VISTA)-mediated suppression of autoimmunity in systemic and cutaneous lupus erythematosus;"Han, Xue; Vesely, Matthew D.; Yang, Wendy; Sanmamed, Miguel F.; Badri, Ti; Alawa, Jude; Lopez-Giraldez, Francesc; Gaule, Patricia; Lee, Sang Won; Zhang, Jian-Ping; Nie, Xinxin; Nassar, Ala; Boto, Agedi; Flies, Dallas B.; Zheng, Linghua; Kim, Tae Kon; Moeckel, Gilbert W.; McNiff, Jennifer M.; Chen, Lieping";;;;SCIENCE TRANSLATIONAL MEDICINE;DEC 11 2019;2019;11;522;;;;;;eaax1159;10.1126/scitranslmed.aax1159;;;4;2;0;0;0;0;0;0;0;0;0;0
Integrated Cross-Species Analysis Identifies a Conserved Transitional Dendritic Cell Population;"Leylek, Rebecca; Alcantara-Hernandez, Marcela; Lanzar, Zachary; Ludtke, Anja; Perez, Oriana A.; Reizis, Boris; Idoyaga, Juliana";;;;CELL REPORTS;DEC 10 2019;2019;29;11;;;;3736;+;;10.1016/j.celrep.2019.11.042;;;4;2;0;0;0;0;0;0;0;0;0;0
Automated optimized parameters for T-distributed stochastic neighbor embedding improve visualization and analysis of large datasets;"Belkina, Anna C.; Ciccolella, Christopher O.; Anno, Rina; Halpert, Richard; Spidlen, Josef; Snyder-Cappione, Jennifer E.";;;;NATURE COMMUNICATIONS;NOV 28 2019;2019;10;;;;;;;5415;10.1038/s41467-019-13055-y;;;4;2;0;0;0;0;0;0;0;0;0;1
Pregnancy-Induced Alterations in NK Cell Phenotype and Function;"Le Gars, Mathieu; Seiler, Christof; Kay, Alexander W.; Bayless, Nicholas L.; Starosvetsky, Elina; Moore, Lindsay; Shen-Orr, Shai S.; Aziz, Natali; Khatri, Purvesh; Dekker, Cornelia L.; Swan, Gary E.; Davis, Mark M.; Holmes, Susan; Blish, Catherine A.";;;;FRONTIERS IN IMMUNOLOGY;OCT 23 2019;2019;10;;;;;;;2469;10.3389/fimmu.2019.02469;;;4;2;0;0;0;0;0;0;0;0;0;0
Qualifying antibodies for image-based immune profiling and multiplexed tissue imaging;"Du, Ziming; Lin, Jia-Ren; Rashid, Rumana; Maliga, Zoltan; Wang, Shu; Aster, Jon C.; Lzar, Benjamin; Sorger, Peter K.; Santagata, Sandro";;;;NATURE PROTOCOLS;OCT 2019;2019;14;10;;;;2900;2930;;10.1038/s41596-019-0206-y;;;4;2;0;0;0;0;0;0;0;0;0;1
Mass cytometry dissects T cell heterogeneity in the immune tumor microenvironment of common dysproteinemias at diagnosis and after first line therapies;"Kourelis, Taxiarchis V.; Villasboas, Jose C.; Jessen, Erik; Dasari, Surendra; Dispenzieri, Angela; Jevremovic, Dragan; Kumar, Shaji";;;;BLOOD CANCER JOURNAL;AUG 28 2019;2019;9;;;;;;;72;10.1038/s41408-019-0234-4;;;4;2;0;0;0;0;0;0;0;0;0;0
Stabilizing Antibody Cocktails for Mass Cytometry;"Schulz, Axel R.; Baumgart, Sabine; Schulze, Julia; Urbicht, Marie; Gruetzkau, Andreas; Mei, Henrik E.";;;;CYTOMETRY PART A;AUG 2019;2019;95A;8;;;SI;910;916;;10.1002/cyto.a.23781;;;4;2;0;0;0;0;0;0;0;0;0;3
A Novel, Five-Marker Alternative to CD16-CD14 Gating to Identify the Three Human Monocyte Subsets;"Ong, Siew-Min; Teng, Karen; Newell, Evan; Chen, Hao; Chen, Jinmiao; Loy, Thomas; Yeo, Tsin-Wen; Fink, Katja; Wong, Siew-Cheng";;;;FRONTIERS IN IMMUNOLOGY;JUL 26 2019;2019;10;;;;;;;1761;10.3389/fimmu.2019.01761;;;4;2;0;0;0;0;0;0;0;0;0;0
CD4(+) Tissue-resident Memory T Cells Expand and Are a Major Source of Mucosal Tumour Necrosis Factor alpha in Active Crohn's Disease;"Bishu, Shrinivas; El Zaatari, Mohammed; Hayashi, Atsushi; Hou, Guoqing; Bowers, Nicole; Kinnucan, Jami; Manoogian, Beth; Muza-Moons, Michelle; Zhang, Min; Grasberger, Helmut; Bourque, Charlie; Zou, Weiping; Higgins, Peter D. R.; Spence, Jason R.; Stidham, Ryan W.; Kamada, Nobuhiko; Kao, John Y.";;;;JOURNAL OF CROHNS & COLITIS;JUL 2019;2019;13;7;;;;905;915;;10.1093/ecco-jcc/jjz010;;;4;2;0;0;0;0;0;0;0;0;0;2
Glucose Metabolism Drives Histone Acetylation Landscape Transitions that Dictate Muscle Stem Cell Function;"Yucel, Nora; Wang, Yu Xin; Mai, Thach; Porpiglia, Ermelinda; Lund, Peder J.; Markov, Glenn; Garcia, Benjamin A.; Bendall, Sean C.; Angelo, Michael; Blau, Helen M.";;;;CELL REPORTS;JUN 25 2019;2019;27;13;;;;3939;+;;10.1016/j.celrep.2019.05.092;;;4;2;0;0;0;0;0;0;0;0;0;2
Differential Dynamics of the Maternal Immune System in Healthy Pregnancy and Preeclampsia;"Han, Xiaoyuan; Ghaemi, Mohammad S.; Ando, Kazuo; Peterson, Laura S.; Ganio, Edward A.; Tsai, Amy S.; Gaudilliere, Dyani K.; Stelzer, Ina A.; Einhaus, Jakob; Bertrand, Basile; Stanley, Natalie; Culos, Anthony; Tanada, Athena; Hedou, Julien; Tsai, Eileen S.; Fallahzadeh, Ramin; Wong, Ronald J.; Judy, Amy E.; Winn, Virginia D.; Druzins, Maurice L.; Blumenfeld, Yair J.; Hlatky, Mark A.; Quaintance, Cecele C.; Gibbs, Ronald S.; Carvalho, Brendan; Shaw, Gary M.; Stevenson, David K.; Angst, Martin S.; Aghaeepour, Nima; Gaudilliere, Brice";;;;FRONTIERS IN IMMUNOLOGY;JUN 11 2019;2019;10;;;;;;;1305;10.3389/fimmu.2019.01305;;;4;2;0;0;0;0;0;0;0;0;0;0
Analysis of the Human Kinome and Phosphatome by Mass Cytometry Reveals Overexpression-Induced Effects on Cancer-Related Signaling;"Lun, Xiao-Kang; Szklarczyk, Damian; Gabor, Attila; Dobberstein, Nadine; Zanotelli, Vito Riccardo Tomaso; Saez-Rodriguez, Julio; von Mering, Christian; Bodenmiller, Bernd";;;;MOLECULAR CELL;JUN 6 2019;2019;74;5;;;;1086;+;;10.1016/j.molcel.2019.04.021;;;4;2;0;0;0;0;0;0;0;0;0;2
Prevalence and Cellular Distribution of Novel Immune Checkpoint Targets Across Longitudinal Specimens in Treatment-naive Melanoma Patients: Implications for Clinical Trials;"Edwards, Jarem; Tasker, Annie; da Silva, Ines Pires; Quek, Camelia; Batten, Marcel; Ferguson, Angela; Allen, Ruth; Allanson, Benjamin; Saw, Robyn P. M.; Thompson, John F.; Menzies, Alexander M.; Palendira, Umaimainthan; Wilmott, James S.; Long, Georgina, V; Scolyer, Richard A.";;;;CLINICAL CANCER RESEARCH;JUN 1 2019;2019;25;11;;;;3247;3258;;10.1158/1078-0432.CCR-18-4011;;;4;2;0;0;0;0;0;0;0;0;0;3
Single-cell technologies - studying rheumatic diseases one cell at a time;"Cheung, Peggie; Khatri, Purvesh; Utz, Paul J.; Kuo, Alex J.";;;;NATURE REVIEWS RHEUMATOLOGY;JUN 2019;2019;15;6;;;;340;354;;10.1038/s41584-019-0220-z;;;4;2;0;0;0;0;0;0;0;0;0;2
Bcl-2 Is a Therapeutic Target for Hypodiploid B-Lineage Acute Lymphoblastic Leukemia;"Diaz-Flores, Ernesto; Comeaux, Evan Q.; Kim, Kailyn L.; Melnik, Ella; Beckman, Kyle; Davis, Kara L.; Wu, Kevin; Akutagawa, Jon; Bridges, Olga; Marino, Roberta; Wohlfeil, Margo; Braun, Benjamin S.; Mullighan, Charles G.; Loh, Mignon L.";;;;CANCER RESEARCH;MAY 1 2019;2019;79;9;;;;2339;2351;;10.1158/0008-5472.CAN-18-0236;;;4;2;0;0;0;0;0;0;0;0;0;2
Identification of NK Cell Subpopulations That Differentiate HIV-Infected Subject Cohorts with Diverse Levels of Virus Control;"Pohlmeyer, Christopher W.; Gonzalez, Veronica D.; Irrinki, Alivelu; Ramirez, Ricardo N.; Li, Li; Mulato, Andrew; Murry, Jeffrey P.; Arvey, Aaron; Hoh, Rebecca; Deeks, Steven G.; Kukolj, George; Cihlar, Tomas; Pflanz, Stefan; Nolan, Garry P.; Min-Oo, Gundula";;;;JOURNAL OF VIROLOGY;APR 2019;2019;93;7;;;;;;e01790-18;10.1128/JVI.01790-18;;;4;2;0;0;0;0;0;0;0;0;0;1
High-Dimensional Mass Cytometric Analysis Reveals an Increase in Effector Regulatory T Cells as a Distinguishing Feature of Colorectal Tumors;"Norton, Samuel E.; Ward-Hartstonge, Kirsten A.; McCall, John L.; Leman, Julia K. H.; Taylor, Edward S.; Munro, Fran; Black, Michael A.; de St Groth, Barbara Fazekas; McGuire, Helen M.; Kemp, Roslyn A.";;;;JOURNAL OF IMMUNOLOGY;MAR 15 2019;2019;202;6;;;;1871;1884;;10.4049/jimmunol.1801368;;;4;2;0;0;0;0;0;0;0;0;0;2
Automatic detecting and counting magnetic beads-labeled target cells from a suspension in a microfluidic chip;"Song, Zhenyu; Li, Mengqi; Li, Bao; Yan, Yimo; Song, Yongxin";;;;ELECTROPHORESIS;MAR 2019;2019;40;6;;;SI;897;905;;10.1002/elps.201800345;2nd International Conference of Microfluidics, Nanofluidics and Lab-on-a-Chip;JUN 08-10, 2018;4;2;0;0;0;0;0;0;0;0;0;0
Proliferation tracing with single-cell mass cytometry optimizes generation of stem cell memory-like T cells;"Good, Zinaida; Borges, Luciene; Gonzalez, Nora Vivanco; Sahaf, Bita; Samusik, Nikolay; Tibshirani, Robert; Nolan, Garry P.; Bendall, Sean C.";;;;NATURE BIOTECHNOLOGY;MAR 2019;2019;37;3;;;;259;+;;10.1038/s41587-019-0033-2;;;4;2;0;0;0;0;0;0;0;0;0;4
Immune Profiling and Precision Medicine in Systemic Lupus Erythematosus;"Nagafuchi, Yasuo; Shoda, Hirofumi; Fujio, Keishi";;;;CELLS;FEB 2019;2019;8;2;;;;;;140;10.3390/cells8020140;;;4;2;0;0;0;0;0;0;0;0;0;1
Multi-omics at single-cell resolution: comparison of experimental and data fusion approaches;"Leonavicius, Karolis; Nainys, Juozas; Kuciauskas, Dalius; Mazutis, Linas";;;;CURRENT OPINION IN BIOTECHNOLOGY;FEB 2019;2019;55;;;;;159;166;;10.1016/j.copbio.2018.09.012;;;4;2;0;0;0;0;0;0;0;0;0;2
Maturing Human CD127+CCR7+PDL1+Dendritic Cells Express AIRE in the Absence of Tissue Restricted Antigens;"Fergusson, Joannah R.; Morgan, Michael D.; Bruchard, Melanie; Huitema, Leonie; Heesters, Balthasar A.; van Unen, Vincent; van Hamburg, Jan Piet; van der Wel, Nicole N.; Picavet, Daisy; Koning, Frits; Tas, Sander W.; Anderson, Mark S.; Marioni, John C.; Hollander, Georg A.; Spits, Hergen";;;;FRONTIERS IN IMMUNOLOGY;JAN 14 2019;2019;9;;;;;;;2902;10.3389/fimmu.2018.02902;;;4;2;0;0;0;0;0;0;0;0;0;1
High-Parameter Single-Cell Analysis;"Chattopadhyay, Pratip K.; Winters, Aidan F.; Lomas, Woodrow E., III; Laino, Andressa S.; Woods, David M.";;;"Bohn, PW; Pemberton, JE";ANNUAL REVIEW OF ANALYTICAL CHEMISTRY, VOL 12;2019;2019;12;;;;;411;430;;10.1146/annurev-anchem-061417-125927;;;4;2;0;0;0;0;0;0;0;0;0;1
Single-Cell Protein Secretion Detection and Profiling;"Chen, Zhuo; Chen, Jonathan J.; Fan, Rong";;;"Bohn, PW; Pemberton, JE";ANNUAL REVIEW OF ANALYTICAL CHEMISTRY, VOL 12;2019;2019;12;;;;;431;449;;10.1146/annurev-anchem-061318-115055;;;4;2;0;0;0;0;0;0;0;0;0;3
Dissecting the Immune Landscape of Acute Myeloid Leukemia;"Davidson-Moncada, Jan; Viboch, Elena; Church, Sarah E.; Warren, Sarah E.; Rutella, Sergio";;;;BIOMEDICINES;DEC 2018;2018;6;4;;;;;;110;10.3390/biomedicines6040110;;;4;1,33;0;0;0;0;0;0;0;0;0;2
GateFinder: projection-based gating strategy optimization for flow and mass cytometry;"Aghaeepour, Nima; Simonds, Erin F.; Knapp, David J. H. F.; Bruggner, Robert, V; Sachs, Karen; Culos, Anthony; Gherardini, Pier Federico; Samusik, Nikolay; Fragiadakis, Gabriela K.; Bendall, Sean C.; Gaudilliere, Brice; Angst, Martin S.; Eaves, Connie J.; Weiss, William A.; Fantl, Wendy J.; Nolan, Garry P.";;;;BIOINFORMATICS;DEC 1 2018;2018;34;23;;;;4131;4133;;10.1093/bioinformatics/bty430;;;4;1,33;0;0;0;0;0;0;0;0;0;4
Single-cell epigenetics - Chromatin modification atlas unveiled by mass cytometry;"Cheung, Peggie; Vallania, Francesco; Dvorak, Mai; Chang, Sarah E.; Schaffert, Steven; Donato, Michele; Rao, Aditya M.; Mao, Rong; Utz, Paul J.; Khatri, Purvesh; Kuo, Alex J.";;;;CLINICAL IMMUNOLOGY;NOV 2018;2018;196;;;;SI;40;48;;10.1016/j.clim.2018.06.009;;;4;1,33;0;0;0;0;0;0;0;0;0;4
Integrating Immunology and Microfluidics for Single Immune Cell Analysis;"Sinha, Nidhi; Subedi, Nikita; Tel, Jurjen";;;;FRONTIERS IN IMMUNOLOGY;OCT 16 2018;2018;9;;;;;;;2373;10.3389/fimmu.2018.02373;;;4;1,33;0;0;0;0;0;0;0;0;0;1
The role of automated cytometry in the new era of cancer immunotherapy (Review);"Danova, Marco; Torchio, Martina; Comolli, Giuditta; Sbrana, Andrea; Antonuzzo, Andrea; Mazzini, Giuliano";;;;MOLECULAR AND CLINICAL ONCOLOGY;OCT 2018;2018;9;4;;;;355;361;;10.3892/mco.2018.1701;;;4;1,33;0;0;0;0;0;0;0;0;0;2
T cell-directed IL-17 production by lung granular gamma delta T cells is coordinated by a novel IL-2 and IL-1 beta circuit;"Menoret, Antoine; Buturla, James A.; Xu, Maria M.; Svedova, Julia; Kumar, Sanjeev; Rathinam, Vijay A. K.; Vella, Anthony T.";;;;MUCOSAL IMMUNOLOGY;SEP 2018;2018;11;5;;;;1398;1407;;10.1038/s41385-018-0037-0;;;4;1,33;0;0;0;0;0;0;0;0;0;2
Mass Cytometry Analysis Reveals the Landscape and Dynamics of CD32a(+) CD4(+) T Cells From Early HIV Infection to Effective cART;"Coindre, Sixtine; Tchitchek, Nicolas; Alaoui, Lamine; Vaslin, Bruno; Bourgeois, Christine; Goujard, Cecile; Avettand-Fenoel, Veronique; Lecuroux, Camille; Bruhns, Pierre; Le Grand, Roger; Beignon, Anne-Sophie; Lambotte, Olivier; Favier, Benoit";ANRS CO6 PRIMO Cohort;;;FRONTIERS IN IMMUNOLOGY;JUN 4 2018;2018;9;;;;;;;1217;10.3389/fimmu.2018.01217;;;4;1,33;0;0;0;0;0;0;0;0;1;3
Proteomics to study macrophage response to viral infection;"Nyman, Tuula A.; Matikainen, Sampsa";;;;JOURNAL OF PROTEOMICS;MAY 30 2018;2018;180;;;;SI;99;107;;10.1016/j.jprot.2017.06.018;;;4;1,33;0;0;0;0;0;0;0;0;2;1
Multiparameter cell-tracking intrinsic cytometry for single-cell characterization;"Apichitsopa, N.; Jaffe, A.; Voldman, J.";;;;LAB ON A CHIP;MAY 21 2018;2018;18;10;;;;1430;1439;;10.1039/c8lc00240a;;;4;1,33;0;0;0;0;0;0;0;0;0;3
Differences Between Pediatric and Adult T Cell Responses to In Vitro Staphylococcal Enterotoxin B Stimulation;"Rudolph, Mark E.; McArthur, Monica A.; Barnes, Robin S.; Magder, Laurence S.; Chen, Wilbur H.; Sztein, Marcelo B.";;;;FRONTIERS IN IMMUNOLOGY;MAR 20 2018;2018;9;;;;;;;498;10.3389/fimmu.2018.00498;;;4;1,33;0;0;0;0;0;0;0;0;0;4
QFMatch: multidimensional flow and mass cytometry samples alignment;"Orlova, Darya Y.; Meehan, Stephen; Parks, David; Moore, Wayne A.; Meehan, Connor; Zhao, Qian; Ghosn, Eliver E. B.; Herzenberg, Leonore A.; Walther, Guenther";;;;SCIENTIFIC REPORTS;FEB 19 2018;2018;8;;;;;;;3291;10.1038/s41598-018-21444-4;;;4;1,33;0;0;0;0;0;0;0;0;0;3
Application of phospho-CyTOF to characterize immune activation in patients with sickle cell disease in an ex vivo model of thrombosis;"Glassberg, Jeffrey; Rahman, Adeeb H.; Zafar, Mohammad; Cromwell, Caroline; Punzalan, Alexa; Badimon, Juan Jose; Aledort, Louis";;;;JOURNAL OF IMMUNOLOGICAL METHODS;FEB 2018;2018;453;;;;SI;11;19;;10.1016/j.jim.2017.07.014;;;4;1,33;0;0;0;0;0;0;0;0;1;2
Multiplex peptide-MHC tetramer staining using mass cytometry for deep analysis of the influenza-specific T-cell response in mice;"Fehlings, M.; Chakarov, S.; Simoni, Y.; Sivasankar, B.; Ginhoux, F.; Newell, E. W.";;;;JOURNAL OF IMMUNOLOGICAL METHODS;FEB 2018;2018;453;;;;SI;30;36;;10.1016/j.jim.2017.09.010;;;4;1,33;0;0;0;0;0;0;0;0;0;4
New Frontiers of Metallomics: Elemental and Species-Specific Analysis and Imaging of Single Cells;"Jimenez-Lamana, Javier; Szpunar, Joanna; Lobinski, Ryszard";;;Arruda, MAZ;METALLOMICS: THE SCIENCE OF BIOMETALS;2018;2018;1055;;;;;245;270;;10.1007/978-3-319-90143-5_10;;;4;1,33;0;0;0;0;0;0;0;0;1;2
The search for drug-targetable diagnostic, prognostic and predictive biomarkers in chronic graft-versus-host disease;"Ren, Hong-Gang; Adom, Djamilatou; Paczesny, Sophie";;;;EXPERT REVIEW OF CLINICAL IMMUNOLOGY;2018;2018;14;5;;;;389;404;;10.1080/1744666X.2018.1463159;;;4;1,33;0;0;0;0;0;0;0;0;1;0
Functional genomics of stromal cells in chronic inflammatory diseases;"Slowikowski, Kamil; Wei, Kevin; Brenner, Michael B.; Raychaudhuri, Soumya";;;;CURRENT OPINION IN RHEUMATOLOGY;JAN 2018;2018;30;1;;;;65;71;;10.1097/BOR.0000000000000455;;;4;1,33;0;0;0;0;0;0;0;0;2;2
Scalable multi-sample single-cell data analysis by Partition-Assisted Clustering and Multiple Alignments of Networks;"Li, Ye Henry; Li, Dangna; Samusik, Nikolay; Wang, Xiaowei; Guan, Leying; Nolan, Garry P.; Wong, Wing Hung";;;;PLOS COMPUTATIONAL BIOLOGY;DEC 2017;2017;13;12;;;;;;e1005875;10.1371/journal.pcbi.1005875;;;4;1;0;0;0;0;0;0;0;0;0;2
Lymphocytes as Biomarkers of Therapeutic Response in Rheumatic Autoimmune Diseases, Is It a Realistic Goal?;"Schreiber, Kristina; Nocturne, Gaetane; Cornec, Divi; Daien, Claire I.";;;;CLINICAL REVIEWS IN ALLERGY & IMMUNOLOGY;OCT 2017;2017;53;2;;;;277;290;;10.1007/s12016-017-8614-7;;;4;1;0;0;0;0;0;0;0;2;1;1
Spectral reading of optical resonance-encoded cells in microfluidics;"Humar, Matjaz; Upadhya, Avinash; Yun, Seok Hyun";;;;LAB ON A CHIP;AUG 21 2017;2017;17;16;;;;2777;2784;;10.1039/c7lc00220c;;;4;1;0;0;0;0;0;0;0;1;2;0
Dual-labelled antibodies for flow and mass cytometry: A new tool for cross-platform comparison and enrichment of target cells for mass cytometry;"Baumgart, Sabine; Schulz, Axel R.; Peddinghaus, Anette; Stanislawiak, Silke; Gillert, Sarah; Hirseland, Heike; Krauthaeuser, Susanne; Dose, Christian; Mei, Henrik E.; Gruetzkau, Andreas";;;;EUROPEAN JOURNAL OF IMMUNOLOGY;AUG 2017;2017;47;8;;;;1377;1385;;10.1002/eji.201747031;;;4;1;0;0;0;0;0;0;0;1;2;1
Applying Mass Cytometry to the Analysis of Lymphoid Populations in Transplantation;"Krams, S. M.; Schaffert, S.; Lau, A. H.; Martinez, O. M.";;;;AMERICAN JOURNAL OF TRANSPLANTATION;AUG 2017;2017;17;8;;;;1992;1999;;10.1111/ajt.14145;;;4;1;0;0;0;0;0;0;0;3;0;1
SCENERY: a web application for (causal) network reconstruction from cytometry data;"Papoutsoglou, Georgios; Athineou, Giorgos; Lagani, Vincenzo; Xanthopoulos, Iordanis; Schmidt, Angelika; Elias, Szabolcs; Tegner, Jesper; Tsamardinos, Ioannis";;;;NUCLEIC ACIDS RESEARCH;JUL 3 2017;2017;45;W1;;;;W270;W275;;10.1093/nar/gkx448;;;4;1;0;0;0;0;0;0;0;0;0;4
Sample Preparation for Mass Cytometry Analysis;"McCarthy, Ryan L.; Duncan, Aundrietta D.; Barton, Michelle C.";;;;JOVE-JOURNAL OF VISUALIZED EXPERIMENTS;APR 2017;2017;;122;;;;;;e54394;10.3791/54394;;;4;1;0;0;0;0;0;0;0;1;2;1
Recent advances in applying mass spectrometry and systems biology to determine brain dynamics;"Scifo, Enzo; Calza, Giulio; Fuhrmann, Martin; Soliymani, Rabah; Baumann, Marc; Lalowski, Maciej";;;;EXPERT REVIEW OF PROTEOMICS;2017;2017;14;6;;;;545;559;;10.1080/14789450.2017.1335200;;;4;1;0;0;0;0;0;0;0;0;1;3
Novel tools for primary immunodeficiency diagnosis: making a case for deep profiling;"Hsieh, Elena W. Y.; Hernandez, Joseph D.";;;;CURRENT OPINION IN ALLERGY AND CLINICAL IMMUNOLOGY;DEC 2016;2016;16;6;;;;549;556;;10.1097/ACI.0000000000000319;;;4;0,8;0;0;0;0;0;0;0;0;2;1
Emerging Proteomic Technologies Provide Enormous and Underutilized Potential for Brain Cancer Research;"Qiang Tian; Sangar, Vineet; Price, Nathan D.";;;;MOLECULAR & CELLULAR PROTEOMICS;FEB 2016;2016;15;2;;;;362;367;;10.1074/mcp.R115.053884;;;4;0,8;0;0;0;0;0;0;1;2;0;1
Computationally efficient multidimensional analysis of complex flow cytometry data using second order polynomial histograms;"Zaunders, John; Jing, Junmei; Leipold, Michael; Maecker, Holden; Kelleher, Anthony D.; Koch, Inge";;;;CYTOMETRY PART A;JAN 2016;2016;89A;1;;;SI;44;58;;10.1002/cyto.a.22704;;;4;0,8;0;0;0;0;0;1;1;1;1;0
Transition from identity to bioactivity-guided proteomics for biomarker discovery with focus on the PF2D platform;"Menoret, Antoine; Crocker, Stephen J.; Rodriguez, Annabelle; Rathinam, Vijay A.; Clark, Robert B.; Vella, Anthony T.";;;;PROTEOMICS CLINICAL APPLICATIONS;JAN 2016;2016;10;1;;;SI;8;24;;10.1002/prca.201500029;;;4;0,8;0;0;0;0;0;0;2;1;1;0
Polystyrene microspheres enable 10-color compensation for immunophenotyping of primary human leukocytes;"Byrd, Tiara; Carr, Karen D.; Norman, John C.; Huye, Leslie; Hegde, Meenakshi; Ahmed, Nabil";;;;CYTOMETRY PART A;NOV 2015;2015;87A;11;;;;1038;1046;;10.1002/cyto.a.22717;;;4;0,67;0;0;0;0;0;0;0;0;3;1
Generation of TCR-Engineered T Cells and Their Use To Control the Performance of T Cell Assays;"Bidmon, Nicole; Attig, Sebastian; Rae, Richard; Schroeder, Helene; Omokoko, Tana A.; Simon, Petra; Kuhn, Andreas N.; Kreiter, Sebastian; Sahin, Ugur; Gouttefangeas, Cecile; van der Burg, Sjoerd H.; Britten, Cedrik M.";;;;JOURNAL OF IMMUNOLOGY;JUN 15 2015;2015;194;12;;;;6177;6189;;10.4049/jimmunol.1400958;;;4;0,67;0;0;0;0;0;1;1;0;2;0
Unfold High-Dimensional Clouds for Exhaustive Gating of Flow Cytometry Data;Qiu, Peng;;;;IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS;NOV-DEC 2014;2014;11;6;;;;1045;1051;;10.1109/TCBB.2014.2321403;;;4;0,57;0;0;0;0;1;0;0;2;1;0
Multiparameter Flow Cytometry for Discovery of Disease Mechanisms in Rheumatic Diseases;"Soloski, Mark J.; Chrest, Francis J.";;;;ARTHRITIS AND RHEUMATISM;MAY 2013;2013;65;5;;;;1148;1156;;10.1002/art.37847;;;4;0,5;0;0;0;0;1;2;1;0;0;0
Highlights of the society for immunotherapy of cancer (SITC) 27th annual meeting;"Stroncek, David F.; Melief, Cornelis J. M.; Castiello, Luciano; Cesano, Alessandra; Cheever, Martin A.; Civini, Sara; Comin-Anduix, Begonya; Gajewski, Thomas F.; Greenberg, Philip D.; Kalinski, Pawel; Kaufman, Howard L.; Kershaw, Michael H.; Khleif, Samir N.; Marincola, Francesco; Merritt, William; Munn, David H.; Powell, Daniel J., Jr.; Restifo, Nicholas P.; Rosenberg, Steven A.; Puri, Raj K.; Streicher, Howard; Szalay, Aladar A.; Yee, Cassian; Zitvogel, Laurence; Ribas, Antoni";;;;JOURNAL FOR IMMUNOTHERAPY OF CANCER;2013;2013;1;;;;;;;4;10.1186/2051-1426-1-4;;;4;0,5;0;0;0;0;1;1;1;0;1;0
Immune monitoring using mass cytometry and related high-dimensional imaging approaches;"Hartmann, Felix J.; Bendall, Sean C.";;;;NATURE REVIEWS RHEUMATOLOGY;FEB 2020;2020;16;2;;;;87;99;;10.1038/s41584-019-0338-z;;;3;1,5;0;0;0;0;0;0;0;0;0;0
Cyt-Geist: Current and Future Challenges in Cytometry: Reports of the CYTO 2019 Conference Workshops;"Czechowska, Kamila; Lannigan, Joanne; Aghaeepour, Nima; Back, Jessica B.; Begum, Julfa; Behbehani, Greg; Bispo, Claudia; Bitoun, Daniel; Fernandez, Alfonso Blanco; Boova, Samuel Tony; Brinkman, Ryan Remy; Ciccolella, Christopher O.; Cotleur, Bunny; Davies, Derek; Dela Cruz, Gelo Victoriano; Del Rio-Guerra, Roxana; Des Lauriers-Cox, Ann Marie; Douagi, Iyadh; Dumrese, Claudia; Escobar, Diana L. Bonilla; Estevam, Jose; Ewald, Christina; Fossum, Anna; Gaudilliere, Brice; Green, Cherie; Groves, Christopher; Hall, Christopher; Haque, Yasmin; Hedrick, Michael Nathan; Hogg, Karen; Hsieh, Elena W. Y.; Irish, Jonathan; Lederer, James; Leipold, Michael; Lewis-Tuffin, Laura J.; Litwin, Virginia; Lopez, Peter; Nasdala, Ines; Nedbal, Jakub; Ohlsson-Wilhelm, Betsy M.; Price, Kylie M.; Rahman, Adeeb H.; Rayanki, Radhika; Rieger, Aja M.; Robinson, J. Paul; Shapiro, Howard; Sun, Yongliang Steve; Tang, Vera A.; Tesfa, Lydia; Telford, William G.; Walker, Rachael; Welsh, Joshua A.; Wheeler, Paul; Tarnok, Attila";;;;CYTOMETRY PART A;DEC 2019;2019;95;12;;;;1236;1274;;10.1002/cyto.a.23941;;;3;1,5;0;0;0;0;0;0;0;0;0;0
Tumor Platinum Concentrations and Pathological Responses Following Cisplatin-Containing Chemotherapy in Gastric Cancer Patients;"Cao, Yanshuo; Chang, Qing; Cabanero, Michael; Zhang, Wenjiang; Hafezi-Bakhtiari, Sara; Hedley, David; Darling, Gail; Quereshy, Fayez; Jang, Raymond; Elimova, Elena; Knox, Jennifer; Ornatsky, Olga; Serra, Stefano; Chen, Eric";;;;JOURNAL OF GASTROINTESTINAL CANCER;DEC 2019;2019;50;4;;;;801;807;;10.1007/s12029-018-0153-9;;;3;1,5;0;0;0;0;0;0;0;0;0;3
Metronomic capecitabine as an immune modulator in glioblastoma patients reduces myeloid-derived suppressor cells;"Peereboom, David M.; Alban, Tyler J.; Grabowski, Matthew M.; Alvarado, Alvaro G.; Otvos, Balint; Bayik, Defne; Roversi, Gustavo; McGraw, Mary; Huang, Pengjing; Mohammadi, Alireza M.; Kornblum, Harley, I; Radivoyevitch, Tomas; Ahluwalia, Manmeet S.; Vogelbaum, Michael A.; Lathia, Justin D.";;;;JCI INSIGHT;NOV 14 2019;2019;4;22;;;;;;e130748;10.1172/jci.insight.130748;;;3;1,5;0;0;0;0;0;0;0;0;0;0
Pembrolizumab for anaplastic thyroid cancer: a case study;"Aghajani, Marra Jai; Cooper, Adam; McGuire, Helen; Jeffries, Thomas; Saab, Jawad; Ismail, Kasim; de Souza, Paul; Bray, Victoria; Groth, Barbara Fazekas de St; Niles, Navin; Roberts, Tara Laurine";;;;CANCER IMMUNOLOGY IMMUNOTHERAPY;;2019;;;;;;;;;10.1007/s00262-019-02416-7;;;3;1,5;0;0;0;0;0;0;0;0;0;0
Single Cell Phenotypic Profiling of 27 DLBCL Cases Reveals Marked Intertumoral and Intratumoral Heterogeneity;"Nissen, Michael D.; Kusakabe, Manabu; Wang, Xuehai; Simkin, Guillermo; Gracias, Deanne; Tyshchenko, Kateryna; Hill, Ainsleigh; Meskas, Justin; Hung, Stacy; Chavez, Elizabeth A.; Ennishi, Daisuke; Aoki, Tomohiro; Sarkozy, Clementine; Connors, Joseph M.; Farinha, Pedro; Slack, Graham W.; Gascoyne, Randy D.; Brinkman, Ryan R.; Scott, David W.; Steidl, Christian; Weng, Andrew P.";;;;CYTOMETRY PART A;;2019;;;;;;;;;10.1002/cyto.a.23919;;;3;1,5;0;0;0;0;0;0;0;0;0;0
"High-efficiency CRISPR induction of t(9;11) chromosomal translocations and acute leukemias in human blood stem cells";"Jeong, Johan; Jager, Astraea; Domizi, Pablo; Pavel-Dinu, Mara; Gojenola, Linda; Iwasaki, Masayuki; Wei, Michael C.; Pan, Feng; Zehnder, James L.; Porteus, Matthew H.; Davis, Kara L.; Cleary, Michael L.";;;;BLOOD ADVANCES;OCT 8 2019;2019;3;19;;;;2825;2835;;10.1182/bloodadvances.2019000450;;;3;1,5;0;0;0;0;0;0;0;0;0;0
Modeling Cell-Cell Interactions from Spatial Molecular Data with Spatial Variance Component Analysis;"Arnol, Damien; Schapiro, Denis; Bodenmiller, Bernd; Saez-Rodriguez, Julio; Stegle, Oliver";;;;CELL REPORTS;OCT 1 2019;2019;29;1;;;;202;+;;10.1016/j.celrep.2019.08.077;;;3;1,5;0;0;0;0;0;0;0;0;0;1
Increased T Cell Differentiation and Cytolytic Function in Bangladeshi Compared to American Children;"Wager, Lisa E.; Bolen, Christopher R.; Sigel, Natalia; Angel, Cesar J. Lopez; Guan, Leying; Kirkpatrick, Beth D.; Haque, Rashidul; Tibshirani, Robert J.; Parsonnet, Julie; Petri, William A., Jr.; Davis, Mark M.";;;;FRONTIERS IN IMMUNOLOGY;SEP 20 2019;2019;10;;;;;;;2239;10.3389/fimmu.2019.02239;;;3;1,5;0;0;0;0;0;0;0;0;0;0
Early-Life Compartmentalization of Immune Cells in Human Fetal Tissues Revealed by High-Dimensional Mass Cytometry;"Li, Na; van Unen, Vincent; Guo, Nannan; Abdelaal, Tamim; Somarakis, Antonios; Eggermont, Jeroen; Mahfouz, Ahmed; Lopes, Susana M. Chuva de Sousa; Lelieveldt, Boudewijn P. F.; Koning, Frits";;;;FRONTIERS IN IMMUNOLOGY;AUG 14 2019;2019;10;;;;;;;1932;10.3389/fimmu.2019.01932;;;3;1,5;0;0;0;0;0;0;0;0;0;0
Multiplexed imaging of immune cells in staged multiple sclerosis lesions by mass cytometry;"Ramaglia, Valeria; Sheikh-Mohamed, Salma; Legg, Karen; Park, Calvin; Rojas, Olga L.; Zandee, Stephanie; Fu, Fred; Ornatsky, Olga; Swanson, Eric C.; Pitt, David; Prat, Alexandre; McKee, Trevor D.; Gommerman, Jennifer L.";;;;ELIFE;AUG 1 2019;2019;8;;;;;;;e48051;10.7554/eLife.48051;;;3;1,5;0;0;0;0;0;0;0;0;0;1
Systemic Immunologic Consequences of Chronic Periodontitis;"Gaudilliere, D. K.; Culos, A.; Debali, K.; Tsai, A. S.; Ganio, E. A.; Choi, W. M.; Han, X.; Maghaireh, A.; Choisy, B.; Baca, Q.; Einhaus, J. F.; Hedou, J. J.; Bertrand, B.; Ando, K.; Fallahzadeh, R.; Ghaemi, M. S.; Okada, R.; Stanley, N.; Tanada, A.; Tingle, M.; Alpagot, T.; Helms, J. A.; Angst, M. S.; Aghaeepour, N.; Gaudilliere, B.";;;;JOURNAL OF DENTAL RESEARCH;AUG 2019;2019;98;9;;;;985;993;;10.1177/0022034519857714;;;3;1,5;0;0;0;0;0;0;0;0;0;0
Predicting Cell Populations in Single Cell Mass Cytometry Data;"Abdelaal, Tamim; van Unen, Vincent; Hollt, Thomas; Koning, Frits; Reinders, Marcel J. T.; Mahfouz, Ahmed";;;;CYTOMETRY PART A;JUL 2019;2019;95A;7;;;;769;781;;10.1002/cyto.a.23738;;;3;1,5;0;0;0;0;0;0;0;0;0;3
Recent trends in analysis of nanoparticles in biological matrices;"Gajdosechova, Zuzana; Mester, Zoltan";;;;ANALYTICAL AND BIOANALYTICAL CHEMISTRY;JUL 2019;2019;411;19;;;SI;4277;4292;;10.1007/s00216-019-01620-9;;;3;1,5;0;0;0;0;0;0;0;0;0;3
Pro-inflammatory Aorta-Associated Macrophages Are Involved in Embryonic Development of Hematopoietic Stem Cells;"Mariani, Samanta Antonella; Li, Zhuan; Rice, Siobhan; Krieg, Carsten; Fragkogianni, Stamatina; Robinson, Mark; Vink, Chris Sebastiaan; Pollard, Jeffrey William; Dzierzak, Elaine";;;;IMMUNITY;JUN 18 2019;2019;50;6;;;;1439;+;;10.1016/j.immuni.2019.05.003;;;3;1,5;0;0;0;0;0;0;0;0;0;1
Mass Cytometry Identifies Distinct Subsets of Regulatory T Cells and Natural Killer Cells Associated With High Risk for Type 1 Diabetes;"Barcenilla, Hugo; Akerman, Linda; Pihl, Mikael; Ludvigsson, Johnny; Casas, Rosaura";;;;FRONTIERS IN IMMUNOLOGY;MAY 3 2019;2019;10;;;;;;;982;10.3389/fimmu.2019.00982;;;3;1,5;0;0;0;0;0;0;0;0;0;1
Proinflammatory IL-17 pathways dominate the architecture of the immunome in pediatric refractory epilepsy;"Kumar, Pavanish; Shih, Derrick Chan Wei; Lim, Amanda; Paleja, Bhairav; Ling, Simon; Yun, Lai Li; Poh, Su Li; Ngoh, Adeline; Arkachaisri, Thaschawee; Yeo, Joo Guan; Albani, Salvatore";;;;JCI INSIGHT;APR 18 2019;2019;4;8;;;;;;e126337;10.1172/jci.insight.126337;;;3;1,5;0;0;0;0;0;0;0;0;0;0
CD8+(T-bet+) cells as a predominant biomarker for inclusion body myositis;"Dzangue-Tchoupou, Gaelle; Mariampillai, Kuberaka; Bolko, Lois; Amelin, Damien; Mauhin, Wladimir; Corneau, Aurelien; Blanc, Catherine; Allenbach, Yves; Benveniste, Olivier";;;;AUTOIMMUNITY REVIEWS;APR 2019;2019;18;4;;;;325;333;;10.1016/j.autrev.2019.02.003;;;3;1,5;0;0;0;0;0;0;0;0;0;3
The biology of the cell - insights from mass cytometry;Brodin, Petter;;;;FEBS JOURNAL;APR 2019;2019;286;8;;;;1514;1522;;10.1111/febs.14693;;;3;1,5;0;0;0;0;0;0;0;0;0;1
Beyond the message: advantages of snapshot proteomics with single-cell mass cytometry in solid tumors;"Mistry, Akshitkumar M.; Greenplate, Allison R.; Ihrie, Rebecca A.; Irish, Jonathan M.";;;;FEBS JOURNAL;APR 2019;2019;286;8;;;;1523;1539;;10.1111/febs.14730;;;3;1,5;0;0;0;0;0;0;0;0;0;2
Determination of essential phenotypic elements of clusters in high-dimensional entities-DEPECHE;"Theorell, Axel; Bryceson, Yenan Troi; Theorell, Jakob";;;;PLOS ONE;MAR 7 2019;2019;14;3;;;;;;e0203247;10.1371/journal.pone.0203247;;;3;1,5;0;0;0;0;0;0;0;0;0;1
High-dimensional single-cell proteomics analysis identifies immune checkpoint signatures and therapeutic targets in ulcerative colitis;"Fuchs, Sebastian; Sawas, Nadia; Staedler, Nicolas; Schubert, David A.; D'Andrea, Annalisa; Zeiser, Robert; Piali, Luca; Hruz, Petr; Frei, Andreas P.";;;;EUROPEAN JOURNAL OF IMMUNOLOGY;MAR 2019;2019;49;3;;;;462;475;;10.1002/eji.201847862;;;3;1,5;0;0;0;0;0;0;0;0;0;0
Upregulation of Chitinase 1 in Alveolar Macrophages of HIV-Infected Smokers;"Logue, Eric C.; Neff, C. Preston; Mack, Douglas G.; Martin, Allison K.; Fiorillo, Suzanne; Lavelle, James; Vandivier, R. William; Campbell, Thomas B.; Palmer, Brent E.; Fontenot, Andrew P.";;;;JOURNAL OF IMMUNOLOGY;MAR 1 2019;2019;202;5;;;;1363;1372;;10.4049/jimmunol.1801105;;;3;1,5;0;0;0;0;0;0;0;0;0;1
Serial transplantation reveals a critical role for endoglin in hematopoietic stem cell quiescence;"Borges, Luciene; Oliveira, Vanessa K. P.; Baik, June; Bendall, Sean C.; Perlingeiro, Rita C. R.";;;;BLOOD;FEB 14 2019;2019;133;7;;;;688;696;;10.1182/blood-2018-09-874677;;;3;1,5;0;0;0;0;0;0;0;0;0;1
CytoML for cross-platform cytometry data sharing;"Finak, Greg; Jiang, Wenxin; Gottardo, Raphael";;;;CYTOMETRY PART A;DEC 2018;2018;93A;12;;;SI;1189;1196;;10.1002/cyto.a.23663;;;3;1;0;0;0;0;0;0;0;0;0;2
Dysregulated NK cell PLC gamma 2 signaling and activity in juvenile dermatomyositis;"Throm, Allison A.; Alinger, Joshua B.; Pingel, Jeanette T.; Daugherty, Allyssa L.; Pachman, Lauren M.; French, Anthony R.";;;;JCI INSIGHT;NOV 15 2018;2018;3;22;;;;;;e123236;10.1172/jci.insight.123236;;;3;1;0;0;0;0;0;0;0;0;0;3
A deadly dance: the choreography of host-pathogen interactions, as revealed by single-cell technologies;"Chattopadhyay, Pratip K.; Roederer, Mario; Bolton, Diane L.";;;;NATURE COMMUNICATIONS;NOV 6 2018;2018;9;;;;;;;4638;10.1038/s41467-018-06214-0;;;3;1;0;0;0;0;0;0;0;0;0;3
BRAF and MEK inhibitor therapy eliminates Nestin-expressing melanoma cells in human tumors;"Doxie, Deon B.; Greenplate, Allison R.; Gandelman, Jocelyn S.; Diggins, Kirsten E.; Roe, Caroline E.; Dahlman, Kimberly B.; Sosman, Jeffrey A.; Kelley, Mark C.; Irish, Jonathan M.";;;;PIGMENT CELL & MELANOMA RESEARCH;NOV 2018;2018;31;6;;;;708;719;;10.1111/pcmr.12712;;;3;1;0;0;0;0;0;0;0;0;0;2
Learning time-varying information flow from single-cell epithelial to mesenchymal transition data;"Krishnaswamy, Smita; Zivanovic, Nevena; Sharma, Roshan; Pe'er, Dana; Bodenmiller, Bernd";;;;PLOS ONE;OCT 29 2018;2018;13;10;;;;;;e0203389;10.1371/journal.pone.0203389;;;3;1;0;0;0;0;0;0;0;0;0;1
Will Systems Biology Deliver Its Promise and Contribute to the Development of New or Improved Vaccines? Seeing the Forest Rather than a Few Trees;"Davis, Mark M.; Tato, Cristina M.";;;;COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY;AUG 2018;2018;10;8;;;;;;a028886;10.1101/cshperspect.a028886;;;3;1;0;0;0;0;0;0;0;0;0;3
Tellurium-based mass cytometry barcode for live and fixed cells;"Willis, Lisa M.; Park, Hanuel; Watson, Michael W. L.; Majonis, Daniel; Watson, Jessica L.; Nitz, Mark";;;;CYTOMETRY PART A;JUL 2018;2018;93A;7;;;;685;694;;10.1002/cyto.a.23495;;;3;1;0;0;0;0;0;0;0;0;0;1
Enrichment and Characterization of the Tumor Immune and Non-immune Microenvironments in Established Subcutaneous Murine Tumors;"Newton, Jared M.; Hanoteau, Aurelie; Sikora, Andrew G.";;;;JOVE-JOURNAL OF VISUALIZED EXPERIMENTS;JUN 2018;2018;;136;;;;;;e57685;10.3791/57685;;;3;1;0;0;0;0;0;0;0;0;0;2
Clickable and High-Sensitivity Metal-Containing Tags for Mass Cytometry;"Allo, Bedilu; Lou, Xudong; Bouzekri, Alexandre; Ornatsky, Olga";;;;BIOCONJUGATE CHEMISTRY;JUN 2018;2018;29;6;;;;2028;2038;;10.1021/acs.bioconjchem.8b00239;;;3;1;0;0;0;0;0;0;0;0;1;1
Flow Cytometry Data Preparation Guidelines for Improved Automated Phenotypic Analysis;"Jimenez-Carretero, Daniel; Ligos, Jose Prime M.; Martinez-Lopez, Maria; Sancho, David; Montoya, Maria C.";;;;JOURNAL OF IMMUNOLOGY;MAY 15 2018;2018;200;10;;;;3319;3331;;10.4049/jimmunol.1800446;;;3;1;0;0;0;0;0;0;0;0;0;1
Aptamer-facilitated mass cytometry;"Mironov, Gleb G.; Bouzekri, Alexandre; Watson, Jessica; Loboda, Olga; Ornatsky, Olga; Berezovski, Maxim V.";;;;ANALYTICAL AND BIOANALYTICAL CHEMISTRY;MAY 2018;2018;410;13;;;;3047;3051;;10.1007/s00216-018-1011-0;;;3;1;0;0;0;0;0;0;0;0;0;3
Immune Response to Opisthorchis viverrini Infection and Its Role in Pathology;"Sripa, Banchob; Jumnainsong, Amonrat; Tangkawattana, Sirikachorn; Haswell, Melissa R.";;;"Sripa, B; Brindley, PJ";ASIATIC LIVER FLUKE - FROM BASIC SCIENCE TO PUBLIC HEALTH, PT B;2018;2018;102;;;;;73;95;;10.1016/bs.apar.2018.08.003;;;3;1;0;0;0;0;0;0;0;0;1;2
Single-Cell Proteomics for Cancer Immunotherapy;"Li, Linmei; Yan, Shiqiang; Lin, Bingcheng; Shi, Qihui; Lu, Yao";;;Broome, AM;CANCER NANOTECHNOLOGY-BOOK;2018;2018;139;;;;;185;207;;10.1016/bs.acr.2018.04.006;;;3;1;0;0;0;0;0;0;0;0;0;2
Predicting Causal Relationships from Biological Data: Applying Automated Causal Discovery on Mass Cytometry Data of Human Immune Cells;"Triantafillou, Sofia; Lagani, Vincenzo; Heinze-Deml, Christina; Schmidt, Angelika; Tegner, Jesper; Tsamardinos, Ioannis";;;;SCIENTIFIC REPORTS;OCT 5 2017;2017;7;;;;;;;12724;10.1038/s41598-017-08582-x;;;3;0,75;0;0;0;0;0;0;0;0;1;2
Single-cell analyses to reveal hematopoietic stem cell fate decisions;"Lunger, Ilaria; Fawaz, Malak; Rieger, Michael A.";;;;FEBS LETTERS;AUG 2017;2017;591;15;;;;2195;2212;;10.1002/1873-3468.12712;;;3;0,75;0;0;0;0;0;0;0;0;0;2
Connecting the dots across time: reconstruction of single-cell signalling trajectories using time-stamped data;"Mukherjee, Sayak; Stewart, David; Stewart, William; Lanier, Lewis L.; Das, Jayajit";;;;ROYAL SOCIETY OPEN SCIENCE;AUG 2017;2017;4;8;;;;;;170811;10.1098/rsos.170811;;;3;0,75;0;0;0;0;0;0;0;1;0;1
Flow cytometric analysis of intracellular phosphoproteins in human monocytes;"Coppin, Emilie; Malergue, Fabrice; Thibult, Marie-Laure; Scifo, Caroline; Favre, Cedric; Nunes, Jacques A.";;;;CYTOMETRY PART B-CLINICAL CYTOMETRY;MAY 2017;2017;92;3;;;SI;207;210;;10.1002/cyto.b.21207;;;3;0,75;0;0;0;0;0;0;1;1;0;1
Novel flow cytometry approach to identify bronchial epithelial cells from healthy human airways;"Maestre-Batlle, Danay; Pena, Olga M.; Hirota, Jeremy A.; Gunawan, Evelyn; Rider, Christopher F.; Sutherland, Darren; Alexis, Neil E.; Carlsten, Chris";;;;SCIENTIFIC REPORTS;FEB 6 2017;2017;7;;;;;;;42214;10.1038/srep42214;;;3;0,75;0;0;0;0;0;0;0;0;1;2
Discovery and application of immune biomarkers for hematological malignancies;"Zafeiris, Dimitrios; Vadakekolathu, Jayakumar; Wagner, Sarah; Pockley, Alan Graham; Ball, Graham Roy; Rutella, Sergio";;;;EXPERT REVIEW OF MOLECULAR DIAGNOSTICS;2017;2017;17;11;;;;983;1000;;10.1080/14737159.2017.1381560;;;3;0,75;0;0;0;0;0;0;0;0;1;0
Mass spectrometry-based proteomic exploration of the human immune system: focus on the inflammasome, global protein secretion, and T cells;"Nyman, Tuula A.; Lorey, Martina B.; Cypryk, Wojciech; Matikainen, Sampsa";;;;EXPERT REVIEW OF PROTEOMICS;2017;2017;14;5;;;;395;407;;10.1080/14789450.2017.1319768;;;3;0,75;0;0;0;0;0;0;0;0;1;2
Lymphocyte enrichment using CD81-targeted immunoaffinity matrix;"Pelak, Ondrej; Kuzilkova, Daniela; Thurner, Daniel; Kiene, Marie-Luise; Stanar, Kristian; Stuchly, Jan; Vaskova, Martina; Stary, Jan; Hrusak, Ondrej; Stadler, Herbert; Kalina, Tomas";;;;CYTOMETRY PART A;JAN 2017;2017;91A;1;;;SI;62;72;;10.1002/cyto.a.22918;;;3;0,75;0;0;0;0;0;0;0;0;0;2
Deciphering tumor heterogeneity from FFPE tissues: Its promise and challenges;"Simmons, Alan J.; Lau, Ken S.";;;;MOLECULAR & CELLULAR ONCOLOGY;2017;2017;4;1;;;;;;UNSP e1260191;10.1080/23723556.2016.1260191;;;3;0,75;0;0;0;0;0;0;0;0;3;0
Meeting the challenges of measuring human immune regulation;"Martino, David; Allen, Katrina";;;;JOURNAL OF IMMUNOLOGICAL METHODS;SEP 2015;2015;424;;;;;1;6;;10.1016/j.jim.2015.04.016;;;3;0,5;0;0;0;0;0;0;0;1;2;0
NetworkPainter: dynamic intracellular pathway animation in Cytobank;"Karr, Jonathan R.; Guturu, Harendra; Chen, Edward Y.; Blair, Stuart L.; Irish, Jonathan M.; Kotecha, Nikesh; Covert, Markus W.";;;;BMC BIOINFORMATICS;MAY 25 2015;2015;16;;;;;;;172;10.1186/s12859-015-0602-4;;;3;0,5;0;0;0;0;0;0;0;1;0;2
Opportunities and challenges of proteomics in pediatric patients: Circulating biomarkers after hematopoietic stem cell transplantation as a successful example;"Paczesny, Sophie; Duncan, Christine; Jacobsohn, David; Krance, Robert; Leung, Kathryn; Carpenter, Paul; Bollard, Catherine; Renbarger, Jamie; Cooke, Kenneth";;;;PROTEOMICS CLINICAL APPLICATIONS;DEC 2014;2014;8;11-12;;;SI;837;850;;10.1002/prca.201400033;;;3;0,43;0;0;0;0;1;1;0;0;0;1
Cell Cycle Synchronization and Flow Cytometry Analysis of Mammalian Cells;"Yoshizawa-Sugata, Naoko; Masai, Hisao";;;"Noguchi, E; Gadaleta, MC";CELL CYCLE CONTROL: MECHANISMS AND PROTOCOLS, 2ND EDITION;2014;2014;1170;;;;;279;293;;10.1007/978-1-4939-0888-2_13;;;3;0,43;0;0;0;0;0;2;0;0;1;0
Bayesian Hierarchical Models for Protein Networks in Single-Cell Mass Cytometry;"Mitra, Riten; Muller, Peter; Qiu, Peng; Ji, Yuan";;;;CANCER INFORMATICS;2014;2014;13;;;4;;79;89;UNSP CIN.S13984;10.4137/CIN.S13984;;;3;0,43;0;0;0;0;0;1;1;0;1;0
Experimental and computational methods for the analysis and modeling of signaling networks;"Gherardini, Pier Federico; Helmer-Citterich, Manuela";;;;NEW BIOTECHNOLOGY;MAR 25 2013;2013;30;3;;;;327;332;;10.1016/j.nbt.2012.11.007;;;3;0,38;0;0;0;0;2;1;0;0;0;0
Mass cytometry?based single-cell analysis of human stem cell reprogramming uncovers differential regulation of specific pluripotency markers;"Im, Ilkyun; Son, Ye Seul; Jung, Kwang Bo; Kang, Insoo; Teh, Boon-Eng; Lee, Kyung-Bok; Son, Mi-Young; Kim, Janghwan";;;;JOURNAL OF BIOLOGICAL CHEMISTRY;DEC 6 2019;2019;294;49;;;;18547;18556;;10.1074/jbc.RA119.009061;;;2;1;0;0;0;0;0;0;0;0;0;0
GCN2 drives macrophage and MDSC function and immunosuppression in the tumor microenvironment;"Halaby, Marie Jo; Hezaveh, Kebria; Lamorte, Sara; Ciudad, M. Teresa; Kloetgen, Andreas; MacLeod, Bethany L.; Guo, Mengdi; Chakravarthy, Ankur; Medina, Tiago Da Silva; Ugel, Stefano; Tsirigos, Aristotelis; Bronte, Vincenzo; Munn, David H.; Pugh, Trevor J.; De Carvalho, Daniel D.; Butler, Marcus O.; Ohashi, Pamela S.; Brooks, David G.; McGaha, Tracy L.";;;;SCIENCE IMMUNOLOGY;DEC 2019;2019;4;42;;;;;;eaax8189;10.1126/sciimmunol.aax8189;;;2;1;0;0;0;0;0;0;0;0;0;0
Plasmonic droplet screen for single-cell secretion analysis;"Wei, Shih-Chung; Hsu, Myat Noe; Chen, Chia-Hung";;;;BIOSENSORS & BIOELECTRONICS;NOV 1 2019;2019;144;;;;;;;UNSP 111639;10.1016/j.bios.2019.111639;;;2;1;0;0;0;0;0;0;0;0;0;0
Infliximab-Tumor Necrosis Factor Complexes Elicit Formation of Anti-Drug Antibodies;"Bar-Yoseph, Haggai; Pressman, Sigal; Blatt, Alexandra; Vainberg, Shiran Gerassy; Maimon, Naama; Starosvetsky, Elina; Ungar, Bella; Ben-Horin, Shomron; Shen-Orr, Shai S.; Chowers, Yehuda";Israeli IBD Res Nucleus;;;GASTROENTEROLOGY;NOV 2019;2019;157;5;;;;1338;+;;10.1053/j.gastro.2019.08.009;;;2;1;0;0;0;0;0;0;0;0;0;1
Phase I/II trial of the CXCR4 inhibitor plerixafor in combination with bortezomib as a chemosensitization strategy in relapsed/refractory multiple myeloma;"Ghobrial, Irene M.; Liu, Chia-Jen; Zavidij, Oksana; Azab, Abdel K.; Baz, Rachid; Laubach, Jacob P.; Mishima, Yuji; Armand, Philippe; Munshi, Nikhil C.; Basile, Frank; Constantine, Michael; Vredenburgh, James; Boruchov, Adam; Crilley, Pamela; Henrick, Patrick M.; Hornburg, Kalvis T. V.; Leblebjian, Houry; Chuma, Stacey; Reyes, Kaitlen; Noonan, Kimberly; Warren, Diane; Schlossman, Robert; Paba-Prada, Claudia; Anderson, Kenneth C.; Weller, Edie; Trippa, Lorenzo; Shain, Kenneth; Richardson, Paul G.";;;;AMERICAN JOURNAL OF HEMATOLOGY;NOV 2019;2019;94;11;;;;1244;1253;;10.1002/ajh.25627;;;2;1;0;0;0;0;0;0;0;0;0;0
Relevance of Antibody Validation for Flow Cytometry;"Kalina, Tomas; Lundsten, Kelly; Engel, Pablo";;;;CYTOMETRY PART A;FEB 2020;2020;97;2;;;SI;126;136;;10.1002/cyto.a.23895;;;2;1;0;0;0;0;0;0;0;0;0;1
Innate and adaptive nasal mucosal immune responses following experimental human pneumococcal colonization;"Jochems, Simon P.; de Ruiter, Karin; Solorzano, Carla; Voskamp, Astrid; Mitsi, Elena; Nikolaou, Elissavet; Carniel, Beatriz F.; Pojar, Sherin; German, Esther L.; Reine, Jesus; Soares-Schanoski, Alessandra; Hill, Helen; Robinson, Rachel; Hyder-Wright, Angela D.; Weight, Caroline M.; Durrenberger, Pascal F.; Heyderman, Robert S.; Gordon, Stephen B.; Smits, Hermelijn H.; Urban, Britta C.; Rylance, Jamie; Collins, Andrea M.; Wilkie, Mark D.; Lazarova, Lepa; Leong, Samuel C.; Yazdanbakhsh, Maria; Ferreira, Daniela M.";;;;JOURNAL OF CLINICAL INVESTIGATION;OCT 1 2019;2019;129;10;;;;4523;4538;;10.1172/JCI128865;;;2;1;0;0;0;0;0;0;0;0;0;0
Late-differentiated effector neoantigen-specific CD8+T cells are enriched in peripheral blood of non-small cell lung carcinoma patients responding to atezolizumab treatment;"Fehlings, Michael; Jhunjhunwala, Suchit; Kowanetz, Marcin; O'Gorman, William E.; Hegde, Priti S.; Sumatoh, Hermi; Lee, Boon Heng; Nardin, Alessandra; Becht, Etienne; Flynn, Susan; Ballinger, Marcus; Newell, Evan W.; Yadav, Mahesh";;;;JOURNAL FOR IMMUNOTHERAPY OF CANCER;SEP 12 2019;2019;7;1;;;;;;249;10.1186/s40425-019-0695-9;;;2;1;0;0;0;0;0;0;0;0;0;0
Cytometry by time of flight identifies distinct signatures in patients with systemic sclerosis, systemic lupus erythematosus and Sjogrens syndrome;"van der Kroef, Maarten; van den Hoogen, Lucas L.; Mertens, Jorre S.; Blokland, Sofie L. M.; Haskett, Scott; Devaprasad, Abhinandan; Carvalheiro, Tiago; Chouri, Eleni; Vazirpanah, Nadia; Cossu, Marta; Wichers, Catherina G. K.; Silva-Cardoso, Sandra C.; Affandi, Alsya J.; Bekker, Cornelis P. J.; Lopes, Ana P.; Hillen, Maarten R.; Bonte-Mineur, Femke; Kok, Marc R.; Beretta, Lorenzo; Rossato, Marzia; Mingueneau, Michael; van Roon, Joel A. G.; Radstake, Timothy R. D. J.";;;;EUROPEAN JOURNAL OF IMMUNOLOGY;JAN 2020;2020;50;1;;;;119;129;;10.1002/eji.201948129;;;2;1;0;0;0;0;0;0;0;0;0;0
Engineering gamma delta T cells limits tonic signaling associated with chimeric antigen receptors;"Fisher, Jonathan; Sharma, Roshan; Don, Dilu Wisidagamage; Barisa, Marta; Hurtado, Marina Olle; Abramowski, Pierre; Porter, Lucy; Day, William; Borea, Roberto; Inglott, Sarah; Anderson, John; Pe'er, Dana";;;;SCIENCE SIGNALING;SEP 10 2019;2019;12;598;;;;;;eaax1872;10.1126/scisignal.aax1872;;;2;1;0;0;0;0;0;0;0;0;0;1
The dynamic methylome of islets in health and disease;"Avrahami, Dana; Kaestner, Klaus H.";;;;MOLECULAR METABOLISM;SEP 2019;2019;27;;;S;;S25;S32;;10.1016/j.molmet.2019.06.007;;;2;1;0;0;0;0;0;0;0;0;0;0
The landscape of myeloid and astrocyte phenotypes in acute multiple sclerosis lesions;"Park, Calvin; Ponath, Gerald; Levine-Ritterman, Maya; Bull, Edward; Swanson, Eric C.; De Jager, Philip L.; Segal, Benjamin M.; Pitt, David";;;;ACTA NEUROPATHOLOGICA COMMUNICATIONS;AUG 12 2019;2019;7;1;;;;;;130;10.1186/s40478-019-0779-2;;;2;1;0;0;0;0;0;0;0;0;0;0
Human Tumor-Infiltrating Dendritic Cells: From In Situ Visualization to High-Dimensional Analyses;"Hubert, Margaux; Gobbini, Elisa; Bendriss-Vermare, Nathalie; Caux, Christophe; Valladeau-Guilemond, Jenny";;;;CANCERS;AUG 2019;2019;11;8;;;;;;1082;10.3390/cancers11081082;;;2;1;0;0;0;0;0;0;0;0;0;0
Multidimensional profiling of drug-treated cells by Imaging Mass Cytometry;"Bouzekri, Alexandre; Esch, Amanda; Ornatsky, Olga";;;;FEBS OPEN BIO;SEP 2019;2019;9;9;;;;1652;1669;;10.1002/2211-5463.12692;;;2;1;0;0;0;0;0;0;0;0;0;1
Immunocyte Profiling Using Single-Cell Mass Cytometry Reveals EpCAM(+) CD4(+) T Cells Abnormal in Colon Cancer;"Zhang, Ting; Lv, Junwei; Tan, Ziyang; Wang, Boqian; Warden, Antony R.; Li, Yiyang; Jiang, Hui; Li, Hao; Ding, Xianting";;;;FRONTIERS IN IMMUNOLOGY;JUL 9 2019;2019;10;;;;;;;1571;10.3389/fimmu.2019.01571;;;2;1;0;0;0;0;0;0;0;0;0;1
NIH Initiative to Improve Understanding of the Pancreas, Islet, and Autoimmunity in Type 1 Diabetes: The Human Pancreas Analysis Program (HPAP);"Kaestner, Klaus H.; Powers, Alvin C.; Naji, Ali; Atkinson, Mark A.";HPAP Consortium;;;DIABETES;JUL 2019;2019;68;7;;;;1394;1402;;10.2337/db19-0058;;;2;1;0;0;0;0;0;0;0;0;0;1
Modulation of phospho-proteins by interferon-alpha and valproic acid in acute myeloid leukemia;"Forthun, Rakel Brendsdal; Hellesoy, Monica; Sulen, Andre; Kopperud, Reidun Kristin; Sjoholt, Gry; Bruserud, Oystein; McCormack, Emmet; Gjertsen, Bjorn Tore";;;;JOURNAL OF CANCER RESEARCH AND CLINICAL ONCOLOGY;JUL 2019;2019;145;7;;;;1729;1749;;10.1007/s00432-019-02931-1;;;2;1;0;0;0;0;0;0;0;0;0;1
Development of a 2-dimensional atlas of the human kidney with imaging mass cytometry;"Singh, Nikhil; Avigan, Zachary M.; Kliegel, Judith A.; Shuch, Brian M.; Montgomery, Ruth R.; Moeckel, Gilbert W.; Cantley, Lloyd G.";;;;JCI INSIGHT;JUN 20 2019;2019;4;12;;;;;;e129477;10.1172/jci.insight.129477;;;2;1;0;0;0;0;0;0;0;0;0;1
Validation of CyTOF Against Flow Cytometry for Immunological Studies and Monitoring of Human Cancer Clinical Trials;"Gadalla, Ramy; Noamani, Babak; MacLeod, Bethany L.; Dickson, Russell J.; Guo, Mengdi; Xu, Wenxi; Lukhele, Sabelo; Elsaesser, Heidi J.; Razak, Albiruni R. Abdul; Hirano, Naoto; McGaha, Tracy L.; Wang, Ben; Butler, Marcus; Guidos, Cynthia J.; Ohashi, Pam S.; Siu, Lillian L.; Brooks, David G.";;;;FRONTIERS IN ONCOLOGY;MAY 17 2019;2019;9;;;;;;;415;10.3389/fonc.2019.00415;;;2;1;0;0;0;0;0;0;0;0;0;0
Involvement of the myeloid cell compartment in fibrogenesis and systemic sclerosis;"Kania, Gabriela; Rudnik, Michal; Distler, Oliver";;;;NATURE REVIEWS RHEUMATOLOGY;MAY 2019;2019;15;5;;;;288;302;;10.1038/s41584-019-0212-z;;;2;1;0;0;0;0;0;0;0;0;0;1
Robust prediction of clinical outcomes using cytometry data;"Hu, Zicheng; Glicksberg, Benjamin S.; Butte, Atul J.";;;;BIOINFORMATICS;APR 1 2019;2019;35;7;;;;1197;1203;;10.1093/bioinformatics/bty768;;;2;1;0;0;0;0;0;0;0;0;0;2
Lymphocyte mass cytometry identifies a CD3(-)CD4(+) cell subset with a potential role in psoriasis;"Guo, Ruru; Zhang, Ting; Meng, Xinyu; Lin, Zhen; Lin, Jinran; Gong, Yu; Liu, Xuesong; Yu, Yuetian; Zhao, Guilin; Ding, Xlanting; Chen, Xiaoxiang; Lu, Liangjing";;;;JCI INSIGHT;MAR 21 2019;2019;4;6;;;;;;e125306;10.1172/jci.insight.125306;;;2;1;0;0;0;0;0;0;0;0;0;2
Reduced CD27(-)IgD(-) B Cells in Blood and Raised CD27(-)IgD(-) B Cells in Gut-Associated Lymphoid Tissue in Inflammatory Bowel Disease;"Pararasa, Chathyan; Zhang, Na; Tull, Thomas J.; Chong, Ming H. A.; Siu, Jacqueline H. Y.; Guesdon, William; Chavele, Konstantia Maria; Sanderson, Jeremy D.; Langmead, Louise; Kok, Klaartje; Spencer, Jo; Vossenkamper, Anna";;;;FRONTIERS IN IMMUNOLOGY;MAR 5 2019;2019;10;;;;;;;361;10.3389/fimmu.2019.00361;;;2;1;0;0;0;0;0;0;0;0;0;0
Go with the flow: advances and trends in magnetic flow cytometry;"Soares, Rita; Martins, Veronica C.; Macedo, Rita; Cardoso, Filipe A.; Martins, Sofia A. M.; Caetano, Diogo M.; Fonseca, Pedro H.; Silverio, Vania; Cardoso, Susana; Freitas, Paulo P.";;;;ANALYTICAL AND BIOANALYTICAL CHEMISTRY;MAR 2019;2019;411;9;;;;1839;1862;;10.1007/s00216-019-01593-9;;;2;1;0;0;0;0;0;0;0;0;0;2
Optimization of Receptor Occupancy Assays in Mass Cytometry: Standardization Across Channels with QSC Beads;"Bringeland, Gerd Haga; Bader, Lucius; Blaser, Nello; Budzinski, Lisa; Schulz, Axel R.; Mei, Henrik E.; Myhr, Kjell-Morten; Vedeler, Christian A.; Gavasso, Sonia";;;;CYTOMETRY PART A;MAR 2019;2019;95A;3;;;;314;322;;10.1002/cyto.a.23723;;;2;1;0;0;0;0;0;0;0;0;0;2
Flow cytometry: Surface markers and beyond;"Delmonte, Ottavia M.; Fleisher, Thomas A.";;;;JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY;FEB 2019;2019;143;2;;;;528;537;;10.1016/j.jaci.2018.08.011;;;2;1;0;0;0;0;0;0;0;0;0;1
Enabling drug discovery and development through single-cell imaging;"Pomerantz, Andrea K.; Sari-Sarraf, Farid; Grove, Kerri J.; Pedro, Liliana; Rudewicz, Patrick J.; Fathman, John W.; Krucker, Thomas";;;;EXPERT OPINION ON DRUG DISCOVERY;FEB 1 2019;2019;14;2;;;;115;125;;10.1080/17460441.2019.1559147;;;2;1;0;0;0;0;0;0;0;0;0;2
Mycophenolate mofetil reduces STAT3 phosphorylation in systemic lupus erythematosus patients;"Slight-Webb, Samantha; Guthridge, Joel M.; Chakravarty, Eliza F.; Chen, Hua; Lu, Rufei; Macwana, Susan; Bean, Krista; Maecker, Holden T.; Utz, Paul J.; James, Judith A.";;;;JCI INSIGHT;JAN 24 2019;2019;4;2;;;;;;e124575;10.1172/jci.insight.124575;;;2;1;0;0;0;0;0;0;0;0;0;1
Scalable Conjugation and Characterization of Immunoglobulins with Stable Mass Isotope Reporters for Single-Cell Mass Cytometry Analysis;"Hartmann, Felix J.; Simonds, Erin F.; Vivanco, Nora; Bruce, Trevor; Borges, Luciene; Nolan, Garry P.; Spitzer, Matthew H.; Bendall, Sean C.";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;55;81;;10.1007/978-1-4939-9454-0_5;;;2;1;0;0;0;0;0;0;0;0;0;2
Analysis of the Murine Bone Marrow Hematopoietic System Using Mass and Flow Cytometry;"Ashhurst, Thomas M.; Cox, Darren A.; Smith, Adrian L.; King, Nicholas J. C.";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;159;192;;10.1007/978-1-4939-9454-0_12;;;2;1;0;0;0;0;0;0;0;0;0;1
Identification of functionally primitive and immunophenotypically distinct subpopulations in secondary acute myeloid leukemia by mass cytometry;"Bandyopadhyay, Shovik; Fowles, Jared S.; Yu, Liyang; Fisher, Daniel A. C.; Oh, Stephen T.";;;;CYTOMETRY PART B-CLINICAL CYTOMETRY;JAN 2019;2019;96;1;;;;46;56;;10.1002/cyto.b.21743;;;2;1;0;0;0;0;0;0;0;0;0;1
A high-resolution mass cytometry analysis reveals a delay of cytokines production after TLR4 or TLR7/8 engagements in HIV-1 infected humans;"Pereira, Adrien Leite; Tchitchek, Nicolas; Lopez, Ernesto Marcos; Lambotte, Olivier; Le Grand, Roger; Cosma, Antonio";;;;CYTOKINE;NOV 2018;2018;111;;;;;97;105;;10.1016/j.cyto.2018.08.018;;;2;0,67;0;0;0;0;0;0;0;0;0;2
High-dimensional immune phenotyping and transcriptional analyses reveal robust recovery of viable human immune and epithelial cells from frozen gastrointestinal tissue;"Konnikova, Liza; Boschetti, Gilles; Rahman, Adeeb; Mitsialis, Vanessa; Lord, James; Richmond, Camilla; Tomov, Vesselin T.; Gordon, Will; Jelinsky, Scott; Canavan, James; Liss, Andrew; Wall, Sarah; Field, Michael; Zhou, Fanny; Goldsmith, Jeffery D.; Bewtra, Meenakshi; Breault, David T.; Merad, Miriam; Snapper, Scott B.";;;;MUCOSAL IMMUNOLOGY;NOV 2018;2018;11;6;;;;1684;1693;;10.1038/s41385-018-0047-y;;;2;0,67;0;0;0;0;0;0;0;0;0;2
Effect of storage time and temperature on cell cycle analysis by mass cytometry;"Devine, Raymond D.; Sekhri, Palak; Behbehani, Gregory K.";;;;CYTOMETRY PART A;NOV 2018;2018;93A;11;;;;1141;1149;;10.1002/cyto.a.23630;;;2;0,67;0;0;0;0;0;0;0;0;0;1
Implementation of Mass Cytometry as a Tool for Mechanism of Action Studies in Inflammatory Bowel Disease;"Tyler, Christopher J.; Perez-Jeldres, Tamara; Ehinger, Erik; Capaldo, Brian; Karuppuchamy, Thangaraj; Boyer, Joshua D.; Patel, Derek; Dulai, Parambir; Boland, Brigid S.; Lannigan, Joanne; Eckmann, Lars; Ernst, Peter B.; Sandborn, William J.; Ho, Samuel B.; Rivera-Nieves, Jesus";;;;INFLAMMATORY BOWEL DISEASES;NOV 2018;2018;24;11;;;;2366;2376;;10.1093/ibd/izy214;;;2;0,67;0;0;0;0;0;0;0;0;0;1
A Microfluidic Fluorescent Flow Cytometry Capable of Quantifying Cell Sizes and Numbers of Specific Cytosolic Proteins;"Li, Xiufeng; Fan, Beiyuan; Liu, Lixing; Chen, Deyong; Cao, Shanshan; Men, Dong; Wang, Junbo; Chen, Jian";;;;SCIENTIFIC REPORTS;SEP 21 2018;2018;8;;;;;;;14229;10.1038/s41598-018-32333-1;;;2;0,67;0;0;0;0;0;0;0;0;1;0
Ratiometric Barcoding for Mass Cytometry;"Wu, Xu; DeGottardi, Quinn; Wu, I-Che; Wu, Li; Yu, Jiangbo; Kwok, William W.; Chiu, Daniel T.";;;;ANALYTICAL CHEMISTRY;SEP 18 2018;2018;90;18;;;;10688;10694;;10.1021/acs.analchem.8b03201;;;2;0,67;0;0;0;0;0;0;0;0;0;2
Multiparametric analysis of colorectal cancer immune responses;"Leman, Julia K. H.; Sandford, Sarah K.; Rhodes, Janet L.; Kemp, Roslyn A.";;;;WORLD JOURNAL OF GASTROENTEROLOGY;JUL 21 2018;2018;24;27;;;;2995;3005;;10.3748/wjg.v24.i27.2995;;;2;0,67;0;0;0;0;0;0;0;0;0;0
The impact of ischemia-reperfusion injuries on skin resident murine dendritic cells;"Goh, Chi Ching; Evrard, Maximilien; Chong, Shu Zhen; Tan, Yingrou; Tan, Leonard De Li; Teng, Karen Wei Weng; Weninger, Wolfgang; Becker, David Laurence; Tey, Hong Liang; Newell, Evan William; Liu, Bin; Ng, Lai Guan";;;;EUROPEAN JOURNAL OF IMMUNOLOGY;JUN 2018;2018;48;6;;;;1014;1019;;10.1002/eji.201747347;;;2;0,67;0;0;0;0;0;0;0;0;0;2
Absolute Copy Numbers of -Actin Proteins Collected from 10,000 Single Cells;"Fan, Beiyuan; Li, Xiufeng; Liu, Lixing; Chen, Deyong; Cao, Shanshan; Men, Dong; Wang, Junbo; Chen, Jian";;;;MICROMACHINES;MAY 2018;2018;9;5;;;;;;254;10.3390/mi9050254;;;2;0,67;0;0;0;0;0;0;0;0;1;1
Single-cell technologies for profiling T cells to enable monitoring of immunotherapies;"An, Xingyue; Varadarajan, Navin";;;;CURRENT OPINION IN CHEMICAL ENGINEERING;MAR 2018;2018;19;;;;;142;152;;10.1016/j.coche.2018.01.003;;;2;0,67;0;0;0;0;0;0;0;0;1;0
Minimal Residual Disease in Multiple Myeloma: Impact on Response Assessment, Prognosis and Tumor Heterogeneity;"Berger, Natalie; Kim-Schulze, Seunghee; Parekh, Samir";;;AguirreGhiso, JA;BIOLOGICAL MECHANISMS OF MINIMAL RESIDUAL DISEASE AND SYSTEMIC CANCER;2018;2018;1100;;;;;141;159;;10.1007/978-3-319-97746-1_9;;;2;0,67;0;0;0;0;0;0;0;0;0;2
Deep Profiling of the Immune System of Multiple Myeloma Patients Using Cytometry by Time-of-Flight (CyTOF);"Smets, Tina; Stevenaert, Frederik; Adams, Homer, III; Vanhoof, Greet";;;"Heuck, C; Weinhold, N";MULTIPLE MYELOMA: METHODS AND PROTOCOLS;2018;2018;1792;;;;;47;54;;10.1007/978-1-4939-7865-6_4;;;2;0,67;0;0;0;0;0;0;0;0;1;1
Broad Immune Monitoring and Profiling of T Cell Subsets with Mass Cytometry;"Brodie, Tess Melinda; Tosevski, Vinko";;;"Barteneva, NS; Vorobjev, IA";CELLULAR HETEROGENEITY: METHODS AND PROTOCOLS;2018;2018;1745;;;;;67;82;;10.1007/978-1-4939-7680-5_4;;;2;0,67;0;0;0;0;0;0;0;0;0;1
A Mind Map for Managing Minimal Residual Disease in Acute Myeloid Leukemia;"Benton, Christopher B.; Ravandi, Farhad";;;;CLINICAL ADVANCES IN HEMATOLOGY & ONCOLOGY;NOV 2017;2017;15;11;;;;859;867;;;;;2;0,5;0;0;0;0;0;0;0;0;1;1
Multi-Omics Analyses of the Development and Function of Natural Killer Cells;"Zhou, Yonggang; Xu, Xiuxiu; Tian, Zhigang; Wei, Haiming";;;;FRONTIERS IN IMMUNOLOGY;SEP 5 2017;2017;8;;;;;;;1095;10.3389/fimmu.2017.01095;;;2;0,5;0;0;0;0;0;0;0;0;0;2
Overexpression of the human antigen R suppresses the immediate paradoxical proliferation of melanoma cell subpopulations in response to suboptimal BRAF inhibition;"Fernandez, Marylise; Sutterluety-Fall, Hedwig; Schwarzler, Christoph; Lemeille, Sylvain; Boehncke, Wolf-Henning; Merat, Rastine";;;;CANCER MEDICINE;JUL 2017;2017;6;7;;;;1652;1664;;10.1002/cam4.1091;;;2;0,5;0;0;0;0;0;0;0;0;0;2
Characterization by mass cytometry of different methods for the preparation of muscle mononuclear cells;"Spada, Filomena; Fuoco, Claudia; Pirro, Stefano; Paoluzi, Serena; Castagnoli, Luisa; Gargioli, Cesare; Cesareni, Gianni";;;;NEW BIOTECHNOLOGY;SEP 25 2016;2016;33;5;A;;;514;523;;10.1016/j.nbt.2015.12.007;7th Alpbach Workshop on Affinity Proteomics;MAR 09-11, 2015;2;0,4;0;0;0;0;0;0;0;0;1;1
Inductively Coupled Plasma Mass Spectrometry-Based Techniques for Single Cell Analysis;"Shi Jun-Wen; Zhang Xin-Ying; Li Liang; Feng Wei-Yue; Wang Hai-Fang; Wang Meng";;;;PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS;AUG 2016;2016;43;8;;;;739;746;;10.16476/j.pibb.2016.0003;;;2;0,4;0;0;0;0;0;0;0;1;0;1
Beneficial Effects of CpG-Oligodeoxynucleotide Treatment on Trauma and Secondary Lung Infection;"Wanke-Jellinek, Lorenz; Keegan, Joshua W.; Dolan, James W.; Guo, Fei; Chen, Jianfei; Lederer, James A.";;;;JOURNAL OF IMMUNOLOGY;JAN 15 2016;2016;196;2;;;;767;777;;10.4049/jimmunol.1500597;;;2;0,4;0;0;0;0;0;0;0;0;2;0
Single-cell analysis for bioprocessing;"Zhang, Hu; Cui, Xiaolin; Bi, Jingxiu; Dai, Sheng; Ye, Haitao";;;;ENGINEERING IN LIFE SCIENCES;SEP 2015;2015;15;6;;;SI;582;592;;10.1002/elsc.201400155;;;2;0,33;0;0;0;0;0;0;0;1;0;1
Protein networks and activation of lymphocytes;"Helou, Ynes A.; Salomon, Arthur R.";;;;CURRENT OPINION IN IMMUNOLOGY;APR 2015;2015;33;;;;;78;85;;10.1016/j.coi.2015.01.019;;;2;0,33;0;0;0;0;0;1;0;0;1;0
Shooting Movies of Signaling Network Dynamics with Multiparametric Cytometry;Claassen, Manfred;;;"Fienberg, HG; Nolan, GP";HIGH-DIMENSIONAL SINGLE CELL ANALYSIS: MASS CYTOMETRY, MULTI-PARAMETRIC FLOW CYTOMETRY AND BIOINFORMATIC TECHNIQUES;2014;2014;377;;;;;177;189;;10.1007/82_2013_350;;;2;0,29;0;0;0;0;0;2;0;0;0;0
Mass Cytometry Analysis of Human T Cell Phenotype and Function;"Newell, Evan W.; Yun, Lai Li";;;"Waisman, A; Becher, B";T-HELPER CELLS: METHODS AND PROTOCOLS;2014;2014;1193;;;;;55;68;;10.1007/978-1-4939-1212-4_7;;;2;0,29;0;0;0;0;0;0;0;1;0;1
Gold-nanoparticle coated La, Tb-encoded PS beads and their application in investigating the performance of the inductively coupled plasma of a mass cytometer;"Feng, Chun; Baranov, Vladimir I.; Winnik, Mitchell A.";;;;JOURNAL OF ANALYTICAL ATOMIC SPECTROMETRY;2013;2013;28;9;;;;1475;1484;;10.1039/c3ja50149c;;;2;0,25;0;0;0;0;0;0;0;2;0;0
Challenges and Promise for the Development of Human Immune Monitoring;Shen-Orr, Shai S.;;;;RAMBAM MAIMONIDES MEDICAL JOURNAL;OCT 2012;2012;3;4;;;SI;;;e0023;10.5041/RMMJ.10090;;;2;0,22;0;0;0;0;1;1;0;0;0;0
Validation of l-Tellurienylalanine as a Phenylalanine Isostere;"Vurgun, Nesrin; Nitz, Mark";;;;CHEMBIOCHEM;APR 17 2020;2020;21;8;;;;1136;1139;;10.1002/cbic.201900635;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Dissecting the human immune system with single cell RNA sequencing technology;"Xu, Gang; Liu, Yang; Li, Hanjie; Liu, Lei; Zhang, Shuye; Zhang, Zheng";;;;JOURNAL OF LEUKOCYTE BIOLOGY;APR 2020;2020;107;4;;;SI;613;623;;10.1002/JLB.5MR1019-179R;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Anti-TNF treatment negatively regulates human CD4(+) T-cell activation and maturation in vitro, but does not confer an anergic or suppressive phenotype;"Povoleri, Giovanni A. M.; Lalnunhlimi, Sylvine; Steel, Kathryn J. A.; Agrawal, Shweta; O'Byrne, Aoife M.; Ridley, Michael; Kordasti, Shahram; Frederiksen, Klaus S.; Roberts, Ceri A.; Taams, Leonie S.";;;;EUROPEAN JOURNAL OF IMMUNOLOGY;MAR 2020;2020;50;3;;;;445;458;;10.1002/eji.201948190;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Deep Profiling of Cellular Heterogeneity by Emerging Single-Cell Proteomic Technologies;"Yang, Liwei; George, Justin; Wang, Jun";;;;PROTEOMICS;;2019;;;;;;;;1900226;10.1002/pmic.201900226;;;1;0,5;0;0;0;0;0;0;0;0;0;0
TRAIL-induced variation of cell signaling states provides nonheritable resistance to apoptosis;"Baskar, Reema; Fienberg, Harris G.; Khair, Zumana; Favaro, Patricia; Kimmey, Sam; Green, Douglas R.; Nolan, Garry P.; Plevritis, Sylvia; Bendall, Sean C.";;;;LIFE SCIENCE ALLIANCE;DEC 2019;2019;2;6;;;;;;e201900554;10.26508/lsa.201900554;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Immunome perturbation is present in patients with juvenile idiopathic arthritis who are in remission and will relapse upon anti-TNF alpha withdrawal;"Leong, Jing Yao; Chen, Phyllis; Yeo, Joo Guan; Ally, Fauziah; Chua, Camillus; Hazirah, Sharifah Nur; Poh, Su Li; Pan, Lu; Lai, Liyun; Lee, Elene Seck Choon; Bathi, Loshinidevi D. O. Thana; Arkachaisri, Thaschawee; Lovell, Daniel; Albani, Salvatore; Lovell, Daniel J.; Johnson, Anne L.; Spalding, Steven J.; Gottlieb, Beth S.; Morris, Paula W.; Kimura, Yukiko; Onel, Karen; Li, Suzanne C.; Grom, Alexei A.; Taylor, Janalee; Brunner, Hermine I.; Huggins, Jennifer L.; Nocton, James J.; Haines, Kathleen A.; Edelheit, Barbara S.; Shishov, Michael; Jung, Lawrence K.; Williams, Calvin B.; Tesher, Melissa S.; Costanzo, Denise M.; Zemel, Lawrence S.; Dare, Jason A.; Passo, Murray H.; Ede, Kaleo C.; Olson, Judyann C.; Cassidy, Elaine A.; Griffin, Thomas A.; Wagner-Weiner, Linda; Weiss, Jennifer E.; Vogler, Larry B.; Rouster-Stevens, Kelly A.; Beukelman, Timothy; Cron, Randy Q.; Kietz, Daniel; Schikler, Kenneth; Mehta, Jay; Ting, Tracy V.; Verbsky, James W.; Eberhard, B. Anne; Huang, Bin; Chen, Chen; Giannini, Edward H.";Pediat Rheumatology Collaborative;;;ANNALS OF THE RHEUMATIC DISEASES;DEC 2019;2019;78;12;;;;1712;1721;;10.1136/annrheumdis-2019-216059;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Hidden Aspects of Valency in Immune System Regulation;"Samir, Parimal; Kanneganti, Thirumala-Devi";;;;TRENDS IN IMMUNOLOGY;DEC 2019;2019;40;12;;;;1082;1094;;10.1016/j.it.2019.10.005;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Trisomy 21 dysregulates T cell lineages toward an autoimmunity-prone state associated with interferon hyperactivity;"Araya, Paula; Waugh, Katherine A.; Sullivan, Kelly D.; Nunez, Nicolas G.; Roselli, Emiliano; Smith, Keith P.; Granrath, Ross E.; Rachubinski, Angela L.; Estrada, Belinda Enriquez; Butcher, Eric T.; Minter, Ross; Tuttle, Kathryn D.; Bruno, Tullia C.; Maccioni, Mariana; Espinosa, Joaquin M.";;;;PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA;NOV 26 2019;2019;116;48;;;;24231;24241;;10.1073/pnas.1908129116;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Single-Cell Analysis Using Droplet Microfluidics;"Matula, Kinga; Rivello, Francesca; Huck, Wilhelm T. S.";;;;ADVANCED BIOSYSTEMS;JAN 2020;2020;4;1;;;;;;1900188;10.1002/adbi.201900188;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Mass Cytometry Analysis Reveals Complex Cell-State Modifications of Blood Myeloid Cells During HIV Infection;"Coindre, Sixtine; Tchitchek, Nicolas; Alaoui, Lamine; Vaslin, Bruno; Bourgeois, Christine; Goujard, Cecile; Lecuroux, Camille; Bruhns, Pierre; Le Grand, Roger; Beignon, Anne-Sophie; Lambotte, Olivier; Favier, Benoit";;;;FRONTIERS IN IMMUNOLOGY;NOV 22 2019;2019;10;;;;;;;2677;10.3389/fimmu.2019.02677;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Distinguishing human peripheral blood CD16(+) myeloid cells based on phenotypic characteristics;"Fromm, Phillip D.; Silveira, Pablo A.; Hsu, Jennifer L.; Papadimitrious, Michael S.; Lo, Tsun-Ho; Ju, Xinsheng; Kupresanin, Fiona; Romano, Adelina; Hsu, Wei-Hsun; Bryant, Christian E.; Kong, Benjamin; Abadir, Edward; Mekkawy, Ahmed; McGuire, Helen M.; de St Groth, Barbara Fazekas; Cunningham, Ilona; Newman, Elizabeth; Gibson, John; Hogarth, P. Mark; Hart, Derek N. J.; Clark, Georgina J.";;;;JOURNAL OF LEUKOCYTE BIOLOGY;FEB 2020;2020;107;2;;;SI;323;339;;10.1002/JLB.5A1119-362RRR;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Mass Cytometry Imaging for the Study of Human Diseases-Applications and Data Analysis Strategies;"Baharlou, Heeva; Canete, Nicolas P.; Cunningham, Anthony L.; Harman, Andrew N.; Patrick, Ellis";;;;FRONTIERS IN IMMUNOLOGY;NOV 14 2019;2019;10;;;;;;;2657;10.3389/fimmu.2019.02657;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Mass Cytometry Reveals Global Immune Remodeling with Multi-lineage Hypersensitivity to Type I Interferon in Down Syndrome;"Waugh, Katherine A.; Araya, Paula; Pandey, Ahwan; Jordan, Kimberly R.; Smith, Keith P.; Granrath, Ross E.; Khanal, Santosh; Butcher, Eric T.; Estrada, Belinda Enriquez; Rachubinski, Angela L.; McWilliams, Jennifer A.; Minter, Ross; Dimasi, Tiana; Colvin, Kelley L.; Baturin, Dmitry; Pham, Andrew T.; Galbraith, Matthew D.; Bartsch, Kyle W.; Yeager, Michael E.; Porter, Christopher C.; Sullivan, Kelly D.; Hsieh, Elena W.; Espinosa, Joaquin M.";;;;CELL REPORTS;NOV 12 2019;2019;29;7;;;;1893;+;;10.1016/j.celrep.2019.10.038;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Challenges in the Multivariate Analysis of Mass Cytometry Data: The Effect of Randomization;"Papoutsoglou, Georgios; Lagani, Vincenzo; Schmidt, Angelika; Tsirlis, Konstantinos; Cabrero, David-Gomez; Tegner, Jesper; Tsamardinos, Ioannis";;;;CYTOMETRY PART A;NOV 2019;2019;95;11;;;;1178;1190;;10.1002/cyto.a.23908;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Flex-Array (R) - a novel multi-well vessel system for the immobilization and multi-modal testing of intact formalin-fixed paraffin-embedded (FFPE) cells or tissues;"Genty, Carlos; McDonnell, Timothy J.";;;;JOURNAL OF HISTOTECHNOLOGY;OCT 2 2019;2019;42;4;;;SI;215;225;;10.1080/01478885.2019.1679470;;;1;0,5;0;0;0;0;0;0;0;0;0;0
An R-Derived FlowSOM Process to Analyze Unsupervised Clustering of Normal and Malignant Human Bone Marrow Classical Flow Cytometry Data;"Lacombe, Francis; Lechevalier, Nicolas; Vial, Jean Philippe; Bene, Marie C.";;;;CYTOMETRY PART A;NOV 2019;2019;95;11;;;;1191;1197;;10.1002/cyto.a.23897;;;1;0,5;0;0;0;0;0;0;0;0;0;0
A metal-chelating polymer for chelating zirconium and its use in mass cytometry;"Cho, Hyungjun; Liu, Peng; Pichaandi, Jothirmayanantham; Closson, Taunia L. L.; Majonis, Daniel; Leighton, Patricia L. A.; Swanson, Eric; Ornatsky, Olga; Baranov, Vladimir; Winnik, Mitchell A.";;;;EUROPEAN POLYMER JOURNAL;NOV 2019;2019;120;;;;;;;UNSP 109175;10.1016/j.eurpolymj.2019.08.002;;;1;0,5;0;0;0;0;0;0;0;0;0;0
A 40-Marker Panel for High Dimensional Characterization of Cancer Immune Microenvironments by Imaging Mass Cytometry;"Ijsselsteijn, Marieke E.; van der Breggen, Ruud; Sarasqueta, Arantza Farina; Koning, Frits; de Miranda, Noel F. C. C.";;;;FRONTIERS IN IMMUNOLOGY;OCT 29 2019;2019;10;;;;;;;2534;10.3389/fimmu.2019.02534;;;1;0,5;0;0;0;0;0;0;0;0;0;0
CytoNorm: A Normalization Algorithm for Cytometry Data;"Van Gassen, Sofie; Gaudilliere, Brice; Angst, Martin S.; Saeys, Yvan; Aghaeepour, Nima";;;;CYTOMETRY PART A;MAR 2020;2020;97;3;;;SI;268;278;;10.1002/cyto.a.23904;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Characterization of Phenotypes and Functional Activities of Leukocytes From Rheumatoid Arthritis Patients by Mass Cytometry;"Pereira, Adrien Leite; Bitoun, Samuel; Paoletti, Audrey; Nocturne, Gaetane; Lopez, Ernesto Marcos; Cosma, Antonio; Le Grand, Roger; Mariette, Xavier; Tchitchek, Nicolas";;;;FRONTIERS IN IMMUNOLOGY;OCT 18 2019;2019;10;;;;;;;2384;10.3389/fimmu.2019.02384;;;1;0,5;0;0;0;0;0;0;0;0;0;0
CytoBackBone: an algorithm for merging of phenotypic information from different cytometric profiles;"Pereira, Adrien Leite; Lambotte, Olivier; Le Grand, Roger; Cosma, Antonio; Tchitchek, Nicolas";;;;BIOINFORMATICS;OCT 15 2019;2019;35;20;;;;4187;4189;;10.1093/bioinformatics/btz212;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Minimizing Batch Effects in Mass Cytometry Data;"Schuyler, Ronald P.; Jackson, Conner; Garcia-Perez, Josselyn E.; Baxter, Ryan M.; Ogolla, Sidney; Rochford, Rosemary; Ghosh, Debashis; Rudra, Pratyaydipta; Hsieh, Elena W. Y.";;;;FRONTIERS IN IMMUNOLOGY;OCT 15 2019;2019;10;;;;;;;2367;10.3389/fimmu.2019.02367;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Mind the Map: Technology Shapes the Myeloid Cell Space;"Guenther, Patrick; Schultze, Joachim L.";;;;FRONTIERS IN IMMUNOLOGY;OCT 4 2019;2019;10;;;;;;;2287;10.3389/fimmu.2019.02287;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Cell generation dynamics underlying naive T-cell homeostasis in adult humans;"Mold, Jeff E.; Reu, Pedro; Olin, Axel; Bernard, Samuel; Michaelsson, Jakob; Rane, Sanket; Yates, Andrew; Khosravi, Azadeh; Salehpour, Mehran; Possnert, Goran; Brodin, Petter; Frisen, Jonas";;;;PLOS BIOLOGY;OCT 2019;2019;17;10;;;;;;;10.1371/journal.pbio.3000383;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Platelet surface marker analysis by mass cytometry;"Blair, Thomas A.; Frelinger, Andrew L., III";;;;PLATELETS;;2019;;;;;;;;;10.1080/09537104.2019.1668549;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Mass Cytometry Enabling Absolute and Fast Quantification of Silver Nanoparticle Uptake at the Single Cell Level;"Oliver, Ana Lopez-Serrano; Haase, Andrea; Peddinghaus, Anette; Wittke, Doreen; Jakubowski, Norbert; Luch, Andreas; Gruetzkau, Andreas; Baumgart, Sabine";;;;ANALYTICAL CHEMISTRY;SEP 17 2019;2019;91;18;;;;11514;11519;;10.1021/acs.analchem.9b01870;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Targeting myeloid-derived suppressor cells in combination with primary mammary tumor resection reduces metastatic growth in the lungs;"Bosiljcic, Momir; Cederberg, Rachel A.; Hamilton, Melisa J.; LePard, Nancy E.; Harbourne, Bryant T.; Collier, Jenna L.; Halvorsen, Elizabeth C.; Shi, Rocky; Franks, S. Elizabeth; Kim, Ada Y.; Banath, Judit P.; Hamer, Mark; Rossi, Fabio M.; Bennewith, Kevin L.";;;;BREAST CANCER RESEARCH;SEP 5 2019;2019;21;1;;;;;;103;10.1186/s13058-019-1189-x;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Circulating B Cells With Memory and Antibody-Secreting Phenotypes Are Detectable in Pediatric Kidney Transplant Recipients Before the Development of Antibody-Mediated Rejection;"Fischman, Clara; Fribourg, Miguel; Fabrizio, Ginevri; Cioni, Michela; Comoli, Patrizia; Nocera, Arcangelo; Cardillo, Massimo; Cantarelli, Chiara; Gallon, Lorenzo; Petrosyan, Astgik; Sacco, Stefano; Perin, Laura; Cravedi, Paolo";;;;TRANSPLANTATION DIRECT;SEP 2019;2019;5;9;;;;;;e481;10.1097/TXD.0000000000000914;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Single-cell mass cytometry reveals in vivo immunological response to surgical biomaterials;"Wu, Haoyu; Han, Shan; Wu, Bingbing; Du, Xiaotian; Sheng, Zixuan; Lin, Junxin; Chen, Xuri; Zhao, Kun; Bunpetch, Varitsara; Chen, Yishan; Zeng, Mengfeng; Alakpa, Enateri V.; Ma, Yuanzhu; Lei, Xiaoyue; Huang, Jiayun; Zou, Xiaohui; Ouyang, Hongwei";;;;APPLIED MATERIALS TODAY;SEP 2019;2019;16;;;;;169;178;;10.1016/j.apmt.2019.05.007;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Single Cell Mass Cytometry of Non-Small Cell Lung Cancer Cells Reveals Complexity of In Vivo and Three-Dimensional Models over the Petri-Dish;"Alfoldi, Robert; Balog, Jozsef A.; Farago, Nora; Halmai, Miklos; Kotogany, Edit; Neuperger, Patricia; Nagy, Lajos, I; Feher, Liliana Z.; Szebeni, Gabor J.; Puskas, Laszlo G.";;;;CELLS;SEP 2019;2019;8;9;;;;;;1093;10.3390/cells8091093;;;1;0,5;0;0;0;0;0;0;0;0;0;0
A Modified Injector and Sample Acquisition Protocol Can Improve Data Quality and Reduce Inter-Instrument Variability of the Helios Mass Cytometer;"Lee, Brian H.; Kelly, Geoffrey; Bradford, Shermineh; Davila, Melanie; Guo, Xinzheng V.; Amir, El-Ad David; Thrash, Emily M.; Solga, Michael D.; Lannigan, Joanne; Sellers, Brian; Candia, Julian; Tsang, John; Montgomery, Ruth R.; Tamaki, Stanley J.; Sigdel, Tara K.; Sarwal, Minnie M.; Lanier, Lewis L.; Tian, Yuan; Kim, Cheryl; Hinz, Denise; Peters, Bjoern; Sette, Alessandro; Rahman, Adeeb H.";;;;CYTOMETRY PART A;SEP 2019;2019;95;9;;;;1019;1030;;10.1002/cyto.a.23866;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Immunomodulatory effect of mesenchymal stem cells in chemical-induced liver injury: a high-dimensional analysis;"Liu, Jingqi; Feng, Bing; Xu, Yanping; Zhu, Jiaqi; Feng, Xudong; Chen, Wenyi; Sheng, Xinyu; Shi, Xiaowei; Pan, Qiaoling; Yu, Jiong; Zeng, Xun; Cao, Hongcui; Li, Lanjuan";;;;STEM CELL RESEARCH & THERAPY;AUG 23 2019;2019;10;1;;;;;;262;10.1186/s13287-019-1379-6;;;1;0,5;0;0;0;0;0;0;0;0;0;0
High-dimensional analysis reveals a pathogenic role of inflammatory monocytes in experiments diffuse alveolar hemorrhage;"Lee, Pui Y.; Nelson-Maney, Nathan; Huang, Yuelong; Levescot, Anais; Wang, Qiang; Wei, Kevin; Cunin, Pierre; Li, Yi; Lederer, James A.; Zhuang, Haoyang; Han, Shuhong; Kim, Edy Y.; Reeves, Westley H.; Nigrovic, Peter A.";;;;JCI INSIGHT;AUG 8 2019;2019;4;15;;;;;;e129703;10.1172/jci.insight.129703;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Characterization of Leukocytes From HIV-ART Patients Using Combined Cytometric Profiles of 72 Cell Markers;"Pereira, Adrian Leite; Tchitchek, Nicolas; Lambotte, Olivier; Le Grand, Roger; Cosma, Antonio";;;;FRONTIERS IN IMMUNOLOGY;AUG 6 2019;2019;10;;;;;;;1777;10.3389/fimmu.2019.01777;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Mass Cytometry Discovers Two Discrete Subsets of CD39(-)Treg Which Discriminate MGUS From Multiple Myeloma;"Marsh-Wakefield, Felix; Kruzins, Annabel; McGuire, Helen M.; Yang, Shihong; Bryant, Christian; de St Groth, Barbara Fazekas; Nassif, Najah; Byrne, Scott N.; Gibson, John; Brown, Christina; Larsen, Stephen; McCulloch, Derek; Boyle, Richard; Clark, Georgina; Joshua, Douglas; Ho, Phoebe Joy; Vuckovic, Slavica";;;;FRONTIERS IN IMMUNOLOGY;AUG 2 2019;2019;10;;;;;;;1596;10.3389/fimmu.2019.01596;;;1;0,5;0;0;0;0;0;0;0;0;0;0
A Mass-Ratiometry-Based CD45 Barcoding Method for Mass Cytometry Detection;"Meng, Hongu; Warden, Antony; Zhang, Lulu; Zhang, Ting; Li, Yiyang; Tan, Ziyang; Wang, Boqian; Li, Hongxia; Jiang, Hui; Shen, Guangxia; Hong, Yifan; Ding, Xianting";;;;SLAS TECHNOLOGY;AUG 2019;2019;24;4;;;;408;419;;10.1177/2472630319834057;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Techniques to Study Antigen-Specific B Cell Responses;"Boonyaratanakornkit, Jim; Taylor, Justin J.";;;;FRONTIERS IN IMMUNOLOGY;JUL 24 2019;2019;10;;;;;;;1694;10.3389/fimmu.2019.01694;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Mass cytometry reveals an impairment of B cell homeostasis in anti-synthetase syndrome;"Dzangue-Tchoupou, Gaelle; Allenbach, Yves; Preusse, Corinna; Stenzel, Werner; Benveniste, Olivier";;;;JOURNAL OF NEUROIMMUNOLOGY;JUL 15 2019;2019;332;;;;;212;215;;10.1016/j.jneuroim.2019.04.014;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Candidate Markers for Stratification and Classification in Rheumatoid Arthritis;"Bader, Lucius; Gullaksen, Stein-Erik; Blaser, Nello; Brun, Morten; Bringeland, Gerd Haga; Sulen, Andre; Gjesdal, Clara Gram; Vedeler, Christian; Gavasso, Sonia";;;;FRONTIERS IN IMMUNOLOGY;JUL 5 2019;2019;10;;;;;;;1488;10.3389/fimmu.2019.01488;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Titrating Complex Mass Cytometry Panels;"Gullaksen, Stein-Erik; Bader, Lucius; Hellesoy, Monica; Sulen, Andre; Fagerholt, Oda Helen Eck; Engen, Caroline B.; Skavland, Jorn; Gjertsen, Bjorn Tore; Gavasso, Sonia";;;;CYTOMETRY PART A;JUL 2019;2019;95A;7;;;;792;796;;10.1002/cyto.a.23751;;;1;0,5;0;0;0;0;0;0;0;0;0;0
SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples;"Zhang, Ze; Luo, Danni; Zhong, Xue; Choi, Jin Huk; Ma, Yuanqing; Wang, Stacy; Mahrt, Elena; Guo, Wei; Stawiski, Eric W.; Modrusan, Zora; Seshagiri, Somasekar; Kapur, Payal; Hon, Gary C.; Brugarolas, James; Wang, Tao";;;;GENES;JUL 2019;2019;10;7;;;;;;531;10.3390/genes10070531;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Individual liver plasmacytoid dendritic cells are capable of producing IFN alpha and multiple additional cytokines during chronic HCV infection;"Doyle, Erin Heather; Rahman, Adeeb; Aloman, Costica; Klepper, Arielle L.; El-Shamy, Ahmed; Eng, Francis; Rocha, Chiara; Kim, Sang; Haydel, Brandy; Florman, Sander S.; Fiel, M. Isabel; Schiano, Thomas; Branch, Andrea D.";;;;PLOS PATHOGENS;JUL 2019;2019;15;7;;;;;;e1007935;10.1371/journal.ppat.1007935;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Automated subset identification and characterization pipeline for multidimensional flow and mass cytometry data clustering and visualization;"Meehan, Stephen; Kolyagin, Gleb A.; Parks, David; Youngyunpipatkul, Justin; Herzenberg, Leonore A.; Walther, Guenther; Ghosn, Eliver E. B.; Orlova, Darya Y.";;;;COMMUNICATIONS BIOLOGY;JUN 20 2019;2019;2;;;;;;;229;10.1038/s42003-019-0467-6;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Imaging Mass Cytometry and Single-Cell Genomics Reveal Differential Depletion and Repletion of B-Cell Populations Following Ofatumumab Treatment in Cynomolgus Monkeys;"Theil, Diethilde; Smith, Paul; Huck, Catherine; Gilbart, Yoann; Kakarieka, Algirdas; Leppert, David; Rauld, Celine; Schmid, Cindy; Baumgartner, Reto; Stuber, Nathalie; Cordoba, Francisco; Dubost, Valerie; Darribat, Katy; Jivkov, Magali; Frieauff, Wilfried; Kneuer, Rainer; Stoeckli, Markus; Reinker, Stefan; Mansfield, Keith; Carballido, Jose M.; Couttet, Philippe; Weckbecker, Gisbert";;;;FRONTIERS IN IMMUNOLOGY;JUN 20 2019;2019;10;;;;;;;1340;10.3389/fimmu.2019.01340;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Structure-preserving visualisation of high dimensional single-cell datasets;"Szubert, Benjamin; Cole, Jennifer E.; Monaco, Claudia; Drozdov, Ignat";;;;SCIENTIFIC REPORTS;JUN 20 2019;2019;9;;;;;;;8914;10.1038/s41598-019-45301-0;;;1;0,5;0;0;0;0;0;0;0;0;0;0
ChronoClust: Density-based clustering and cluster high-dimensional time-series data;"Putri, Givanna H.; Read, Mark N.; Koprinska, Irena; Singh, Deeksha; Rohm, Uwe; Ashhurst, Thomas M.; King, Nicholas J. C.";;;;KNOWLEDGE-BASED SYSTEMS;JUN 15 2019;2019;174;;;;;9;26;;10.1016/j.knosys.2019.02.018;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Development of a Comprehensive Antibody Staining Database Using a Standardized Analytics Pipeline;"Amir, El-ad David; Lee, Brian; Badoual, Paul; Gordon, Martin; Guo, Xinzheng, V; Merad, Miriam; Rahman, Adeeb H.";;;;FRONTIERS IN IMMUNOLOGY;JUN 11 2019;2019;10;;;;;;;UNSP 1315;10.3389/fimmu.2019.01315;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Single-Cell High-Throughput Technologies in Cerebrospinal Fluid Research and Diagnostics;"Lanz, Tobias, V; Proebstel, Anne-Katrin; Mildenberger, Iris; Platten, Michael; Schirmer, Lucas";;;;FRONTIERS IN IMMUNOLOGY;JUN 11 2019;2019;10;;;;;;;UNSP 1302;10.3389/fimmu.2019.01302;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Profiling protein-protein interactions of single cancer cells with in situ lysis and co-immunoprecipitation;"Ryu, Ji Young; Kim, Jihye; Shon, Min Ju; Sun, Jiashu; Jiang, Xingyu; Lee, Wonhee; Yoon, Tae-Young";;;;LAB ON A CHIP;JUN 7 2019;2019;19;11;;;;1922;1928;;10.1039/c9lc00139e;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Quantitative Comparison of Conventional and t-SNE-guided Gating Analyses;"Eshghi, Shadi Toghi; Au-Yeung, Amelia; Takahashi, Chikara; Bolen, Christopher R.; Nyachienga, Maclean N.; Lear, Sean P.; Green, Cherie; Mathews, W. Rodney; O'Gorman, William E.";;;;FRONTIERS IN IMMUNOLOGY;JUN 5 2019;2019;10;;;;;;;1194;10.3389/fimmu.2019.01194;;;1;0,5;0;0;0;0;0;0;0;0;0;0
NK cell immune responses differ after prime and boost vaccination;"Palgen, Jean-Louis; Tchitchek, Nicolas; Huot, Nicolas; Elhmouzi-Younes, Jamila; Lefebvre, Cecile; Rosenbaum, Pierre; Dereuddre-Bosquet, Nathalie; Martinon, Frederic; Hocini, Hakim; Cosma, Antonio; Muller-Trutwin, Michaela; Levy, Yves; Le Grand, Roger; Beignon, Anne-Sophie";;;;JOURNAL OF LEUKOCYTE BIOLOGY;MAY 2019;2019;105;5;;;;1055;1073;;10.1002/JLB.4A1018-391RR;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Molecular insights into cancer drug resistance from a proteomics perspective;"An, Yao; Zhou, Li; Huang, Zhao; Nice, Edouard C.; Zhang, Haiyuan; Huang, Canhua";;;;EXPERT REVIEW OF PROTEOMICS;MAY 4 2019;2019;16;5;;;;413;429;;10.1080/14789450.2019.1601561;;;1;0,5;0;0;0;0;0;0;0;0;0;0
A novel combination of chemotherapy and immunotherapy controls tumor growth in mice with a human immune system;"Burlion, Aude; Ramos, Rodrigo N.; Pukar, K. C.; Sendeyo, Kelhia; Corneau, Aurelien; Menetrier-Caux, Christine; Piaggio, Eliane; Olive, Daniel; Caux, Christophe; Marodon, Gilles";;;;ONCOIMMUNOLOGY;JUL 3 2019;2019;8;7;;;;;;;10.1080/2162402X.2019.1596005;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Intramucosal Inoculation of Squamous Cell Carcinoma Cells in Mice for Tumor Immune Profiling and Treatment Response Assessment;"Oweida, Ayman J.; Bhatia, Shilpa; Van Court, Benjamin; Darragh, Laurel; Serkova, Natalie; Karam, Sana D.";;;;JOVE-JOURNAL OF VISUALIZED EXPERIMENTS;APR 2019;2019;;146;;;;;;e59195;10.3791/59195;;;1;0,5;0;0;0;0;0;0;0;0;0;0
OMIP-054: Broad Immune Phenotyping of Innate and Adaptive Leukocytes in the Brain, Spleen, and Bone Marrow of an Orthotopic Murine Glioblastoma Model by Mass Cytometry;"Dusoswa, Sophie A.; Verhoeff, Jan; Garcia-Vallejo, Juan J.";;;;CYTOMETRY PART A;APR 2019;2019;95A;4;;;SI;422;426;;10.1002/cyto.a.23725;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Modular synthesis and modification of novel bifunctional dendrons;"Tulli, Ludovico G.; Miranda, Daniela; Lee, Cameron C.; Sullivan, Yang; Grotzfeld, Robert; Hollingworth, Gregory; Kneuer, Rainer; Karpov, Alexei S.";;;;ORGANIC & BIOMOLECULAR CHEMISTRY;MAR 21 2019;2019;17;11;;;;2906;2912;;10.1039/c8ob02988a;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Age-Associated Heterogeneity of Ty21a-Induced T Cell Responses to HLA-E Restricted Salmonella Typhi Antigen Presentation;"Rudolph, Mark E.; McArthur, Monica A.; Magder, Laurence S.; Barnes, Robin S.; Chen, Wilbur H.; Sztein, Marcelo B.";;;;FRONTIERS IN IMMUNOLOGY;MAR 4 2019;2019;10;;;;;;;257;10.3389/fimmu.2019.00257;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Penalized Supervised Star Plots: Example Application in Influenza-Specific CD4+T Cells;"Holmes, Tyson H.; Subrahmanyam, Priyanka B.; Wang, Weiqi; Maecker, Holden T.";;;;VIRAL IMMUNOLOGY;MAR 1 2019;2019;32;2;;;;102;109;;10.1089/vim.2018.0046;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Mass cytometry identifies distinct CD4(+) T cell clusters distinguishing HIV-1-infected patients according to antiretroviral therapy initiation;"Bekele, Yonas; Lakshmikanth, Tadepally; Chen, Yang; Mikes, Jaromir; Nasi, Aikaterini; Petkov, Stefan; Hejdeman, Bo; Brodin, Petter; Chiodi, Francesca";;;;JCI INSIGHT;FEB 7 2019;2019;4;3;;;;;;e125442;10.1172/jci.insight.125442;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Evidence for Innate and Adaptive Immune Responses in a Cohort of Intractable Pediatric Epilepsy Surgery Patients;"Owens, Geoffrey C.; Garcia, Alejandro J.; Mochizuki, Aaron Y.; Chang, Julia W.; Reyes, Samuel D.; Salamon, Noriko; Prins, Robert M.; Mathern, Gary W.; Fallah, Aria";;;;FRONTIERS IN IMMUNOLOGY;JAN 29 2019;2019;10;;;;;;;121;10.3389/fimmu.2019.00121;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Acquisition, Processing, and Quality Control of Mass Cytometry Data;"Lee, Brian H.; Rahman, Adeeb H.";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;13;31;;10.1007/978-1-4939-9454-0_2;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Surface Barcoding of Live PBMC for Multiplexed Mass Cytometry;"Schulz, Axel Ronald; Mei, Henrik E.";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;93;108;;10.1007/978-1-4939-9454-0_7;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Live Cell Barcoding for Efficient Analysis of Small Samples by Mass Cytometry;Wagar, Lisa E.;;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;125;135;;10.1007/978-1-4939-9454-0_9;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Staining of Phosphorylated Signalling Markers Protocol for Mass Cytometry;"Shinko, Diana; Ashhurst, Thomas M.; McGuire, Helen M.; Charles, Kellie A.";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;139;146;;10.1007/978-1-4939-9454-0_10;;;1;0,5;0;0;0;0;0;0;0;0;0;1
Multiplex MHC Class I Tetramer Combined with Intranuclear Staining by Mass Cytometry;"Simoni, Yannick; Fehlings, Michael; Newell, Evan W.";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;147;158;;10.1007/978-1-4939-9454-0_11;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Picturing Polarized Myeloid Phagocytes and Regulatory Cells by Mass Cytometry;"Roussel, Mikael; Bartkowiak, Todd; Irish, Jonathan M.";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;217;226;;10.1007/978-1-4939-9454-0_14;;;1;0,5;0;0;0;0;0;0;0;0;0;0
Separation, banking, and quality control of peripheral blood mononuclear cells from whole blood of melanoma patients;"Holland, Martha; Cunningham, Rachel; Seymour, Lake; Kleinsteuber, Katja; Cunningham, Amy; Patel, Tara; Manos, Michael; Brennick, Ryan; Zhou, Jun; Hodi, F. Stephen; Severgnini, Mariano";;;;CELL AND TISSUE BANKING;DEC 2018;2018;19;4;;;;783;790;;10.1007/s10561-018-9734-x;;;1;0,33;0;0;0;0;0;0;0;0;0;1
Quantifying Heterogeneity of Individual Organelles in Mixed Populations via Mass Cytometry;"Brown, Heather M. G.; Arriaga, Edgar A.";;;;ANALYTICAL CHEMISTRY;NOV 20 2018;2018;90;22;;;;13315;13321;;10.1021/acs.analchem.8b02790;;;1;0,33;0;0;0;0;0;0;0;0;0;1
Deciphering the immune microenvironment of a tissue by digital imaging and cognition network;"Lopes, A.; Casse, Al H.; Billard, E.; Boulcourt-Sambou, E.; Roche, G.; Larois, C.; Barnich, N.; Naimi, S.; Bonnet, M.; Dumas, B.";;;;SCIENTIFIC REPORTS;NOV 12 2018;2018;8;;;;;;;16692;10.1038/s41598-018-34731-x;;;1;0,33;0;0;0;0;0;0;0;0;0;0
High-dimensional single cell mapping of cerium distribution in the lung immune microenvironment of an active smoker;"Rahman, Adeeb H.; Lavin, Yonit; Kobayashi, Soma; Leader, Andrew; Merad, Miriam";;;;CYTOMETRY PART B-CLINICAL CYTOMETRY;NOV 2018;2018;94;6;;;;941;945;;10.1002/cyto.b.21545;;;1;0,33;0;0;0;0;0;0;0;0;1;0
CytoBinning: Immunological insights from multi-dimensional data;"Shen, Yang; Chaigne-Delalande, Benjamin; Lee, Richard W. J.; Losert, Wolfgang";;;;PLOS ONE;OCT 31 2018;2018;13;10;;;;;;e0205291;10.1371/journal.pone.0205291;;;1;0,33;0;0;0;0;0;0;0;0;0;0
Automatically generate two-dimensional gating hierarchy from clustered cytometry data;"Yang, Xingyu; Qiu, Peng";;;;CYTOMETRY PART A;OCT 2018;2018;93A;10;;;;1039;1050;;10.1002/cyto.a.23577;;;1;0,33;0;0;0;0;0;0;0;0;0;1
Continuous Immune Cell Differentiation Inferred From Single-Cell Measurements Following Allogeneic Stem Cell Transplantation;"Chen, Yang; Lakshmikanth, Tadepally; Olin, Axel; Mikes, Jaromir; Remberger, Mats; Brodin, Petter";;;;FRONTIERS IN MOLECULAR BIOSCIENCES;SEP 12 2018;2018;5;;;;;;;UNSP 81;10.3389/fmolb.2018.00081;;;1;0,33;0;0;0;0;0;0;0;0;0;1
Identification of enhanced IFN-gamma signaling in polyarticular juvenile idiopathic arthritis with mass cytometry;"Throm, Allison A.; Moncrieffe, Halima; Orandi, Amir B.; Pingel, Jeanette T.; Geurs, Theresa L.; Miller, Hannah L.; Daugherty, Allyssa L.; Malkova, Olga N.; Lovell, Daniel J.; Thompson, Susan D.; Grom, Alexei A.; Cooper, Megan A.; Oh, Stephen T.; French, Anthony R.";;;;JCI INSIGHT;AUG 9 2018;2018;3;15;;;;;;e121544;10.1172/jci.insight.121544;;;1;0,33;0;0;0;0;0;0;0;0;0;1
Toward mapping the human body at a cellular resolution;"Roy, Ananda L.; Conroy, Richard S.";;;;MOLECULAR BIOLOGY OF THE CELL;AUG 1 2018;2018;29;15;;;;1779;1785;;10.1091/mbc.E18-04-0260;;;1;0,33;0;0;0;0;0;0;0;0;0;1
In vivo systems biology approaches to chronic immune/inflammatory pathophysiology;"Starchenko, Alina; Lauffenburger, Douglas A.";;;;CURRENT OPINION IN BIOTECHNOLOGY;AUG 2018;2018;52;;;;;9;16;;10.1016/j.copbio.2018.02.006;;;1;0,33;0;0;0;0;0;0;0;0;0;1
OMIP-048 MC: Quantification of calcium sensors and channels expression in lymphocyte subsets by mass cytometry;"Jaracz-Ros, Agnieszka; Hemon, Patrice; Krzysiek, Roman; Bachelerie, Francoise; Schlecht-Louf, Geraldine; Gary-Gouy, Helene";;;;CYTOMETRY PART A;JUL 2018;2018;93A;7;;;;681;684;;10.1002/cyto.a.23504;;;1;0,33;0;0;0;0;0;0;0;0;0;1
Fiat Lux. May be no more true in cytometry! Go to mass and spectrum but still stay classic;"Idziorek, Thierry; Cazareth, Julie; Blanc, Catherine; Jouy, Nathalie; Bourdely, Pierre; Corneau, Aurelien";;;;M S-MEDECINE SCIENCES;MAY 2018;2018;34;5;;;;439;447;;10.1051/medsci/20183405017;;;1;0,33;0;0;0;0;0;0;0;0;1;0
Requirements of skin tissue models for high-throughput screening;"Mathes, Stephanie H.; Parker, Christian N.";;;"Marques, AP; Pirraco, RP; Cerqueira, MT; Reis, RL";SKIN TISSUE MODELS;2018;2018;;;;;;421;440;;10.1016/B978-0-12-810545-0.00018-8;;;1;0,33;0;0;0;0;0;0;0;0;0;1
Detecting intracellular thiol redox state in leukaemia and heterogeneous immune cell populations: An optimised protocol for digital flow cytometers;"Wadley, Alex J.; Morgan, Rhys G.; Heesom, Kate J.; Hole, Paul S.; Coles, Steven J.";;;;METHODSX;2018;2018;5;;;;;1473;1483;;10.1016/j.mex.2018.10.013;;;1;0,33;0;0;0;0;0;0;0;0;0;1
Application of Single Cell Sequencing in Cancer.;"Yu, Lan; Zhao, Hua; Meng, Li; Zhang, Cuilian";;;"Gu, J; Wang, X";SINGLE CELL BIOMEDICINE;2018;2018;1068;;;;;135;148;;10.1007/978-981-13-0502-3_11;;;1;0,33;0;0;0;0;0;0;0;0;0;0
Heterogeneity of Metazoan Cells and Beyond: To Integrative Analysis of Cellular Populations at Single-Cell Level;"Barteneva, Natasha S.; Vorobjev, Ivan A.";;;"Barteneva, NS; Vorobjev, IA";CELLULAR HETEROGENEITY: METHODS AND PROTOCOLS;2018;2018;1745;;;;;3;23;;10.1007/978-1-4939-7680-5_1;;;1;0,33;0;0;0;0;0;0;0;0;0;1
CYTO Asia 2017 meeting highlights;"Hutchinson, Paul E.; Wallace, Paul K.; Vuong Nguyen";;;;CYTOMETRY PART A;DEC 2017;2017;91A;12;;;;1143;1146;;10.1002/cyto.a.23297;;;1;0,25;0;0;0;0;0;0;0;0;0;1
Novel single-cell technologies in acute myeloid leukemia research;"Gupta, Soumyasri Das; Sachs, Zohar";;;;TRANSLATIONAL RESEARCH;NOV 2017;2017;189;;;;;123;135;;10.1016/j.trsl.2017.07.007;;;1;0,25;0;0;0;0;0;0;0;0;0;0
Colony Lysate Arrays for Proteomic Profiling of Drug-Tolerant Persisters of Cancer Cell;"Kume, Kohei; Nishizuka, Satoshi S.";;;;ANALYTICAL CHEMISTRY;SEP 5 2017;2017;89;17;;;;8626;8631;;10.1021/acs.analchem.7b01215;;;1;0,25;0;0;0;0;0;0;0;0;0;1
Informatics-Based Discovery of Disease-Associated Immune Profiles;"Delmas, Amber; Oikonomopoulos, Angelos; Lacey, Precious N.; Fallahi, Mohammad; Hommes, Daniel W.; Sundrud, Mark S.";;;;PLOS ONE;SEP 26 2016;2016;11;9;;;;;;e0163305;10.1371/journal.pone.0163305;;;1;0,2;0;0;0;0;0;0;0;0;1;0
Mass Cytometry: An Evolution in ICP-MS Enabling Novel Insights in Single-Cell Biology;"Virani, Farah; Tanner, Scott";;;;SPECTROSCOPY;MAY 2015;2015;30;5;;;;14;22;;;;;1;0,17;0;0;0;0;0;0;0;0;0;1
Sensitivity analysis for inference with partially identifiable covariance matrices;"G'Sell, Max Grazier; Shen-Orr, Shai S.; Tibshirani, Robert";;;;COMPUTATIONAL STATISTICS;JUN 2014;2014;29;3-4;;;SI;529;546;;10.1007/s00180-013-0451-4;;;1;0,14;0;0;0;0;1;0;0;0;0;0
Quantitation of Cellular Phosphorylation Dynamics by Phosphoproteomics Approaches;"Ishihama, Yasushi; Imami, Koshi";;;;YAKUGAKU ZASSHI-JOURNAL OF THE PHARMACEUTICAL SOCIETY OF JAPAN;APR 2014;2014;134;4;;;;521;527;;10.1248/yakushi.13-00251-4;;;1;0,14;0;0;0;0;0;1;0;0;0;0
Rheumatoid arthritis patients display B-cell dysregulation already in the naive repertoire consistent with defects in B-cell tolerance;"Wang, Yan; Lloyd, Katy A.; Melas, Ioannis; Zhou, Diana; Thyagarajan, Radha; Lindqvist, Joakim; Hansson, Monika; Svard, Anna; Mathsson-Alm, Linda; Kastbom, Alf; Lundberg, Karin; Klareskog, Lars; Catrina, Anca I.; Rapecki, Stephen; Malmstrom, Vivianne; Gronwall, Caroline";;;;SCIENTIFIC REPORTS;DEC 27 2019;2019;9;;;;;;;19995;10.1038/s41598-019-56279-0;;;0;0;0;0;0;0;0;0;0;0;0;0
A comparison framework and guideline of clustering methods for mass cytometry data;"Liu, Xiao; Song, Weichen; Wong, Brandon Y.; Zhang, Ting; Yu, Shunying; Lin, Guan Ning; Ding, Xianting";;;;GENOME BIOLOGY;DEC 23 2019;2019;20;1;;;;;;297;10.1186/s13059-019-1917-7;;;0;0;0;0;0;0;0;0;0;0;0;0
Multi-parameter immune profiling of peripheral blood mononuclear cells by multiplexed single-cell mass cytometry in patients with early multiple sclerosis;"Boettcher, Chotima; Fernandez-Zapata, Camila; Schlickeiser, Stephan; Kunkel, Desiree; Schulz, Axel R.; Mei, Henrik E.; Weidinger, Carl; Giess, Rene M.; Asseyer, Susanna; Siegmund, Britta; Paul, Friedemann; Ruprecht, Klemens; Priller, Josef";;;;SCIENTIFIC REPORTS;DEC 19 2019;2019;9;;;;;;;19471;10.1038/s41598-019-55852-x;;;0;0;0;0;0;0;0;0;0;0;0;0
High-dimensional single-cell proteomics analysis reveals the landscape of immune cells and stem-like cells in renal tumors;"Li, Zhijian; Hu, Jiaxin; Qin, Zhao; Tao, Yuting; Lai, Zhiyong; Wang, Qiuyan; Li, Tianyu";;;;JOURNAL OF CLINICAL LABORATORY ANALYSIS;MAY 2020;2020;34;5;;;;;;e23155;10.1002/jcla.23155;;;0;0;0;0;0;0;0;0;0;0;0;0
Large-Scale HLA Tetramer Tracking of T Cells during Dengue Infection Reveals Broad Acute Activation and Differentiation into Two Memory Cell Fates;"Chng, Melissa Hui Yen; Lim, Mei Qiu; Rouers, Angeline; Becht, Etienne; Lee, Bernett; MacAry, Paul A.; Lye, David Chien; Leo, Yee Sin; Chen, Jinmiao; Fink, Katja; Rivino, Laura; Newell, Evan W.";;;;IMMUNITY;DEC 17 2019;2019;51;6;;;;1119;+;;10.1016/j.immuni.2019.10.007;;;0;0;0;0;0;0;0;0;0;0;0;0
Influence of Cubic-to-Hexagonal-Phase Transformation on the Uniformity of NaLnF(4) (Ho, Tb, Eu, Sm) Nanoparticles;"Lu, Elsa; Pichaandi, Jothirmayanantham; Rastogi, Chandresh Kumar; Arnett, Loryn P.; Winnik, Mitchell A.";;;;CHEMISTRY OF MATERIALS;DEC 10 2019;2019;31;23;;;;9742;9749;;10.1021/acs.chemmater.9b03421;;;0;0;0;0;0;0;0;0;0;0;0;0
A novel immature natural killer cell subpopulation predicts relapse after cord blood transplantation;"Li, Li; Chen, Han; Marin, David; Xi, Yuanxin; Miao, Qi; Lv, Jiangxing; Banerjee, Pinaki Prosad; Shaim, Hila; Daher, May; Basar, Rafet; Imahashi, Nobuhiko; Jimenez, Juan; Hu, Bingqian; Mehta, Rohtesh S.; Kerbauy, Lucila Nassif; Kaplan, Mecit; Mendt, Mayela; Ozcan, Gonca; Gokdemir, Elif; Sanabria, Mayra Hernandez; Li, Ye; Chen, Ken; Wang, Jing; Muniz-Feliciano, Luis; Zhao, Wei-Li; Champlin, Richard E.; Shpall, Elizabeth J.; Rezvani, Katayoun";;;;BLOOD ADVANCES;DEC 10 2019;2019;3;23;;;;4117;4130;;10.1182/bloodadvances.2019000835;;;0;0;0;0;0;0;0;0;0;0;0;0
Visualization and Quantification of High-Dimensional Cytometry Data using Cytofast and the Upstream Clustering Methods FlowSOM and Cytosplore;"Beyrend, Guillaume; Stam, Koen; Ossendorp, Ferry; Arens, Ramon";;;;JOVE-JOURNAL OF VISUALIZED EXPERIMENTS;DEC 2019;2019;;154;;;;;;e60525;10.3791/60525;;;0;0;0;0;0;0;0;0;0;0;0;0
Characterization of mesoangioblast cell fate and improved promyogenic potential of a satellite cell-like subpopulation upon transplantation in dystrophic murine muscles;"Mavoungou, Lionel O.; Neuenschwander, Samuel; Pham, Uyen; Iyer, Pavithra S.; Mermod, Nicolas";;;;STEM CELL RESEARCH;DEC 2019;2019;41;;;;;;;101619;10.1016/j.scr.2019.101619;;;0;0;0;0;0;0;0;0;0;0;0;0
Skin platinum deposition in colorectal cancer patients following oxaliplatin-based therapy;"Cao, Yanshuo; Chang, Qing; Zhang, Wenjiang; Ornatsky, Olga; Hedley, David; Chen, Eric X.";;;;CANCER CHEMOTHERAPY AND PHARMACOLOGY;DEC 2019;2019;84;6;;;;1195;1200;;10.1007/s00280-019-03956-6;;;0;0;0;0;0;0;0;0;0;0;0;0
Importance of Multiparametric Evaluation of Immune-Related T-Cell Markers in Renal-Cell Carcinoma;"Kawashima, Atsunari; Uemura, Motohide; Nonomura, Norio";;;;CLINICAL GENITOURINARY CANCER;DEC 2019;2019;17;6;;;;E1147;E1152;;10.1016/j.clgc.2019.07.021;;;0;0;0;0;0;0;0;0;0;0;0;0
Multi-site reproducibility of a human immunophenotyping assay in whole blood and peripheral blood mononuclear cells preparations using CyTOF technology coupled with Maxpar Pathsetter, an automated data analysis system;"Bagwell, Charles Bruce; Hunsberger, Benjamin; Hill, Beth; Herbert, Donald; Bray, Christopher; Selvanantham, Thirumahal; Li, Stephen; Villasboas, Jose C.; Pavelko, Kevin; Strausbauch, Michael; Rahman, Adeeb; Kelly, Gregory; Asgharzadeh, Shahab; Gomez-Cabrero, Azucena; Behbehani, Gregory; Chang, Hsiaochi; Lyberger, Justin; Montgomery, Ruth; Zhao, Yujiao; Inokunna, Margaret; Goldberger, Ofir; Stelzer, Greg";;;;CYTOMETRY PART B-CLINICAL CYTOMETRY;MAR 2020;2020;98;2;;;;146;160;;10.1002/cyto.b.21858;;;0;0;0;0;0;0;0;0;0;0;0;0
Automated Data Cleanup for Mass Cytometry;"Bagwell, Charles Bruce; Inokuma, Margaret; Hunsberger, Benjamin; Herbert, Donald; Bray, Christopher; Hill, Beth; Stelzer, Gregory; Li, Stephen; Kollipara, Avinash; Ornatsky, Olga; Baranov, Vladimir";;;;CYTOMETRY PART A;FEB 2020;2020;97;2;;;SI;184;198;;10.1002/cyto.a.23926;;;0;0;0;0;0;0;0;0;0;0;0;0
Mass Cytometry Reveals a Sustained Reduction in CD16(+) Natural Killer Cells Following Chemotherapy in Colorectal Cancer Patients;"Shinko, Diana; McGuire, Helen M.; Diakos, Connie I.; Pavlakis, Nick; Clarke, Stephen J.; Byrne, Scott N.; Charles, Kellie A.";;;;FRONTIERS IN IMMUNOLOGY;NOV 5 2019;2019;10;;;;;;;2584;10.3389/fimmu.2019.02584;;;0;0;0;0;0;0;0;0;0;0;0;0
Highly Stable and Inert Complexation of Indium(III) by Reinforced Cyclam Dipicolinate and a Bifunctional Derivative for Bead Encoding in Mass Cytometry;"Grenier, Laura; Beyler, Maryline; Platas-Iglesias, Carlos; Closson, Taunia; Gomez, David Esteban; Seferos, Dwight S.; Liu, Peng; Ornatsky, Olga, I; Baranov, Vladimir; Tripier, Raphael";;;;CHEMISTRY-A EUROPEAN JOURNAL;DEC 2 2019;2019;25;67;;;;15387;15400;;10.1002/chem.201903969;;;0;0;0;0;0;0;0;0;0;0;0;0
Single-cell analysis for proteome and related researches;"Shao, Xi; Weng, Lingxiao; Gao, Mingxia; Zhang, Xiangmin";;;;TRAC-TRENDS IN ANALYTICAL CHEMISTRY;NOV 2019;2019;120;;;;;;;115666;10.1016/j.trac.2019.115666;;;0;0;0;0;0;0;0;0;0;0;0;0
Cellular Signaling Analysis shows antiviral, ribavirin-mediated ribosomal signaling modulation;"Ding, Xianting; Krutzik, Peter O.; Ghaffari, Amir Ali; Zhaozhi, Yixiu; Miranda, Daniel, Jr.; Cheng, Genhong; Ho, Chih-Ming; Nolan, Garry P.; Sanchez, David Jesse";;;;ANTIVIRAL RESEARCH;NOV 2019;2019;171;;;;;;;104598;10.1016/j.antiviral.2019.104598;;;0;0;0;0;0;0;0;0;0;0;0;0
Signal Amplification for Imaging Mass Cytometry;"Rana, Rahul; Gomez-Biagi, Rodolfo F.; Bassan, Jay; Nitz, Mark";;;;BIOCONJUGATE CHEMISTRY;NOV 2019;2019;30;11;;;;2805;2810;;10.1021/acs.bioconjchem.9b00559;;;0;0;0;0;0;0;0;0;0;0;0;0
Application value of CyTOF 2 mass cytometer technology at single-cell level in human gastric cancer cells;"Han, Shuangshuang; Jiang, Xia; Sun, Xiao-Feng; Zhang, Hong; Li, Chao; Zhao, Zengren; Yu, Weifang";;;;EXPERIMENTAL CELL RESEARCH;NOV 1 2019;2019;384;1;;;;;;UNSP 111568;10.1016/j.yexcr.2019.111568;;;0;0;0;0;0;0;0;0;0;0;0;0
CyTOFmerge: integrating mass cytometry data across multiple panels;"Abdelaal, Tamim; Hollt, Thomas; van Unen, Vincent; Lelieveldt, Boudewijn P. F.; Koning, Frits; Reinders, Marcel J. T.; Mahfouz, Ahmed";;;;BIOINFORMATICS;OCT 15 2019;2019;35;20;;;;4063;4071;;10.1093/bioinformatics/btz180;;;0;0;0;0;0;0;0;0;0;0;0;0
Deciphering host immunity to malaria using systems immunology;"Loiseau, Claire; Cooper, Martha M.; Doolan, Denise L.";;;;IMMUNOLOGICAL REVIEWS;JAN 2020;2020;293;1;;;SI;115;143;;10.1111/imr.12814;;;0;0;0;0;0;0;0;0;0;0;0;0
Quantifying the Dynamics of Hematopoiesis by In Vivo IdU Pulse-Chase, Mass Cytometry, and Mathematical Modeling;"Erez, Amir; Mukherjee, Ratnadeep; Altan-Bonnet, Gregoire";;;;CYTOMETRY PART A;OCT 2019;2019;95;10;;;;1075;1084;;10.1002/cyto.a.23799;;;0;0;0;0;0;0;0;0;0;0;0;0
Computational approaches for characterizing the tumor immune microenvironment;"Liu, Candace C.; Steen, Chloe B.; Newman, Aaron M.";;;;IMMUNOLOGY;OCT 2019;2019;158;2;;;;70;84;;10.1111/imm.13101;;;0;0;0;0;0;0;0;0;0;0;0;0
Methods for analyzing tellurium imaging mass cytometry data;"Bassan, Jay; Nitz, Mark";;;;PLOS ONE;SEP 3 2019;2019;14;9;;;;;;e0221714;10.1371/journal.pone.0221714;;;0;0;0;0;0;0;0;0;0;0;0;0
Highly Multiplexed, Quantitative Tissue Imaging at Cellular Resolution;"McCarthy, Madeline E.; Birtwistle, Marc R.";;;;CURRENT PATHOBIOLOGY REPORTS;SEP 2019;2019;7;3;;;;109;118;;10.1007/s40139-019-00203-8;;;0;0;0;0;0;0;0;0;0;0;0;0
Single-cell technologies in reproductive immunology;"Vazquez, Jessica; Ong, Irene M.; Stanic, Aleksandar K.";;;;AMERICAN JOURNAL OF REPRODUCTIVE IMMUNOLOGY;SEP 2019;2019;82;3;;;;;;e13157;10.1111/aji.13157;;;0;0;0;0;0;0;0;0;0;0;0;0
Rigor and Reproducibility of Cytometry Practices for Immuno-Oncology: A multifaceted challenge;"Laskowski, Tamara J.; Hazen, Amy L.; Collazo, Renata S.; Haviland, David";;;;CYTOMETRY PART A;FEB 2020;2020;97;2;;;SI;116;125;;10.1002/cyto.a.23882;;;0;0;0;0;0;0;0;0;0;0;0;0
VOLARE: visual analysis of disease-associated microbiome-immune system interplay;"Siebert, Janet C.; Neff, Charles Preston; Schneider, Jennifer M.; Regner, Emilie H.; Ohri, Neha; Kuhn, Kristine A.; Palmer, Brent E.; Lozupone, Catherine A.; Gorg, Carsten";;;;BMC BIOINFORMATICS;AUG 20 2019;2019;20;1;;;;;;432;10.1186/s12859-019-3021-0;;;0;0;0;0;0;0;0;0;0;0;0;0
Unlabeled Competitor Antibody to Reduce Nonlinear Signal Spillover in Mass Cytometry;"Sekhri, Palak; Kim, Miriam Y.; Behbehani, Gregory K.";;;;CYTOMETRY PART A;AUG 2019;2019;95A;8;;;SI;898;909;;10.1002/cyto.a.23793;;;0;0;0;0;0;0;0;0;0;0;0;0
Resolving complex hierarchies in chemical mixtures: how chemometrics may serve in understanding the immune system;"Tinnevelt, Gerjen Herman; Jansen, Jeroen Jasper";;;;FARADAY DISCUSSIONS;AUG 1 2019;2019;218;;;;;317;338;;10.1039/c9fd00004f;Conference on Challenges in Analysis of Complex Natural Mixtures;MAY 13-15, 2019;0;0;0;0;0;0;0;0;0;0;0;0
Altered monocyte and NK cell phenotypes correlate with posttrauma infection;"Seshadri, Anupamaa; Brat, Gabriel A.; Yorkgitis, Brian K.; Giangola, Matt; Keegan, Joshua; Nguyen, Jennifer P.; Li, Wei; Nakahori, Yasutaka; Wada, Takeshi; Hauser, Carl; Salim, Ali; Askari, Reza; Lederer, James A.";;;;JOURNAL OF TRAUMA AND ACUTE CARE SURGERY;AUG 2019;2019;87;2;;;;337;341;;10.1097/TA.0000000000002264;76th Annual Meeting of the American-Association-for-the-Surgery-of-Trauma (AAST) / Clinical Congress of Acute Care Surgery;SEP 13-16, 2017;0;0;0;0;0;0;0;0;0;0;0;0
The Critical Role of Dysregulated RhoB Signaling Pathway in Radioresistance of Colorectal Cancer;"Liu, Na; Cui, Weiyingqi; Jiang, Xia; Zhang, Zhiyong; Gnosa, Sebastian; Ali, Zaheer; Jensen, Lasse; Jonsson, Jan-Ingvar; Blockhuys, Stephanie; Lam, Eric W-F; Zhao, Zengren; Ping, Jie; Xie, Ning; Kopsida, Maria; Wang, Xin; Sun, Xiao-Feng";;;;INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS;AUG 1 2019;2019;104;5;;;;1153;1164;;10.1016/j.ijrobp.2019.04.021;;;0;0;0;0;0;0;0;0;0;0;0;0
Evaluation of Mass Cytometry in the Clinical Laboratory;"Ravkov, Eugene, V; Charlton, Cheryl M.; Barker, Adam P.; Hill, Harry; Peterson, Lisa K.; Slev, Patricia; Tebo, Anne; Voelkerding, Karl V.; Wittwer, Carl T.; Heikal, Nahla; Delgado, Julio C.; Lazar-Molnar, Eszter; Kumanovics, Attila";;;;CYTOMETRY PART B-CLINICAL CYTOMETRY;JUL 2019;2019;96;4;;;;266;274;;10.1002/cyto.b.21791;;;0;0;0;0;0;0;0;0;0;0;0;0
Learning Single-Cell Distances from Cytometry Data;"Bac Nguyen; Rubbens, Peter; Kerckhof, Frederiek-Maarten; Boon, Nico; De Baets, Bernard; Waegeman, Willem";;;;CYTOMETRY PART A;JUL 2019;2019;95A;7;;;;782;791;;10.1002/cyto.a.23792;;;0;0;0;0;0;0;0;0;0;0;0;0
The role of proteomics in assessing beta-cell dysfunction and death in type 1 diabetes;"Nakayasu, Ernesto S.; Qian, Wei-Jun; Evans-Molina, Carmella; Mirmira, Raghavendra G.; Eizirik, Decio L.; Metz, Thomas O.";;;;EXPERT REVIEW OF PROTEOMICS;JUL 3 2019;2019;16;7;;;;569;582;;10.1080/14789450.2019.1634548;;;0;0;0;0;0;0;0;0;0;0;0;0
Data analysis to modeling to building theory in NK cell biology and beyond: How can computational modeling contribute?;"Das, Jayajit; Lanier, Lewis L.";;;;JOURNAL OF LEUKOCYTE BIOLOGY;JUN 2019;2019;105;6;;;SI;1305;1317;;10.1002/JLB.6MR1218-505R;;;0;0;0;0;0;0;0;0;0;0;0;0
Preparation of Whole Bone Marrow for Mass Cytometry Analysis of Neutrophil-lineage Cells;"Zhu, Yanfang Peipei; Padgett, Lindsey; Dinh, Huy Q.; Marcovecchio, Paola; Wu, Runpei; Hinz, Denise; Kim, Cheryl; Hedrick, Catherine C.";;;;JOVE-JOURNAL OF VISUALIZED EXPERIMENTS;JUN 2019;2019;;148;;;;;;e59617;10.3791/59617;;;0;0;0;0;0;0;0;0;0;0;0;0
Osmium-Labeled Microspheres for Bead-Based Assays in Mass Cytometry;"Budzinski, Lisa; Schulz, Axel R.; Baumgart, Sabine; Burns, Tyler; Rose, Thomas; Hirseland, Heike; Mei, Henrik E.";;;;JOURNAL OF IMMUNOLOGY;MAY 15 2019;2019;202;10;;;;3103;3112;;10.4049/jimmunol.1801640;;;0;0;0;0;0;0;0;0;0;0;0;0
Diversity of Salmonella Typhi-responsive CD4 and CD8 T cells before and after Ty21a typhoid vaccination in children and adults;"Rudolph, Mark E.; McArthur, Monica A.; Magder, Laurence S.; Barnes, Robin S.; Chen, Wilbur H.; Sztein, Marcelo B.";;;;INTERNATIONAL IMMUNOLOGY;MAY 2019;2019;31;5;;;;315;333;;10.1093/intimm/dxz011;;;0;0;0;0;0;0;0;0;0;0;0;0
An integrated framework using high-dimensional mass cytometry and fluorescent flow cytometry identifies discrete B cell subsets in patients with red meat allergy;"Cox, Kelly M.; Commins, Scott P.; Capaldo, Brian J.; Workman, Lisa J.; Platts-Mills, Thomas A. E.; Amir, El-ad D.; Lannigan, Josephine A.; Schuyler, Alexander J.; Erickson, Loren D.";;;;CLINICAL AND EXPERIMENTAL ALLERGY;MAY 2019;2019;49;5;;;;615;625;;10.1111/cea.13322;;;0;0;0;0;0;0;0;0;0;0;0;0
Single cell immune profiling in transplantation research;"Higdon, Lauren E.; Schaffert, Steven; Khatri, Purvesh; Maltzman, Jonathan S.";;;;AMERICAN JOURNAL OF TRANSPLANTATION;MAY 2019;2019;19;5;;;;1278;1287;;10.1111/ajt.15316;;;0;0;0;0;0;0;0;0;0;0;0;0
Isolation and Staining of Mouse Skin Keratinocytes for Cell Cycle Specific Analysis of Cellular Protein Expression by Mass Cytometry;"Fernandez, Josiah; Torchia, Enrique C.";;;;JOVE-JOURNAL OF VISUALIZED EXPERIMENTS;MAY 2019;2019;;147;;;;;;e59353;10.3791/59353;;;0;0;0;0;0;0;0;0;0;0;0;0
Drug discovery for psychiatric disorders using high-content single-cell screening of signaling network responses ex vivo;"Lago, Santiago G.; Tomasik, Jakub; van Rees, Geertje F.; Steeb, Hannah; Cox, David A.; Rustogi, Nitin; Ramsey, Jordan M.; Bishop, Joshua A.; Petryshen, Tracey; Haggarty, Stephen J.; Vazquez-Bourgon, Javier; Papiol, Sergi; Suarez-Pinilla, Paula; Crespo-Facorro, Benedicto; van Beveren, Nico J.; Bahn, Sabine";;;;SCIENCE ADVANCES;MAY 2019;2019;5;5;;;;;;eaau9093;10.1126/sciadv.aau9093;;;0;0;0;0;0;0;0;0;0;0;0;0
Cytometric analysis of cell suspension generated by cavitron ultrasonic surgical aspirator in pediatric brain tumors;"Vaskova, Martina; Tichy, Michal; Zamecnik, Josef; Liby, Petr; Kuzilkova, Daniela; Vicha, Ales; Hrabeta, Jan; Kalina, Tomas; Stary, Jan; Hrusak, Ondrej";;;;JOURNAL OF NEURO-ONCOLOGY;MAY 2019;2019;143;1;;;;15;25;;10.1007/s11060-019-03135-w;;;0;0;0;0;0;0;0;0;0;0;0;0
How Clinical Flow Cytometry Rebooted Sepsis Immunology;"Monneret, Guillaume; Gossez, Morgane; Aghaeepour, Nima; Gaudilliere, Brice; Venet, Fabienne";;;;CYTOMETRY PART A;APR 2019;2019;95A;4;;;SI;431;441;;10.1002/cyto.a.23749;;;0;0;0;0;0;0;0;0;0;0;0;0
Human Germinal Center B Cells Differ from Naive and Memory B Cells in CD40 Expression and CD40L-Induced Signaling Response;"Huse, Kanutte; Wogsland, Cara E.; Polikowsky, Hannah G.; Diggins, Kirsten E.; Smeland, Erlend B.; Myklebust, June H.; Irish, Jonathan M.";;;;CYTOMETRY PART A;APR 2019;2019;95A;4;;;SI;442;449;;10.1002/cyto.a.23737;;;0;0;0;0;0;0;0;0;0;0;0;0
Dissecting CLL through high-dimensional single-cell technologies;"Gohil, Satyen H.; Wu, Catherine J.";;;;BLOOD;MAR 28 2019;2019;133;13;;;;1446;1456;;10.1182/blood-2018-09-835389;;;0;0;0;0;0;0;0;0;0;0;0;0
Genetically Encoded Fluorescent Proteins Enable High-Throughput Assignment of Cell Cohorts Directly from MALDI-MS Images;"Schmitt, Nicholas D.; Rawlins, Catherine M.; Randall, Elizabeth C.; Wang, Xianzhe; Koller, Antonius; Auclair, Jared R.; Kowalski, Jane-Marie; Kowalski, Paul J.; Luther, Ed; Ivanov, Alexander R.; Agar, Nathalie Y. R.; Agar, Jeffrey N.";;;;ANALYTICAL CHEMISTRY;MAR 19 2019;2019;91;6;;;;3810;3817;;10.1021/acs.analchem.8b03454;;;0;0;0;0;0;0;0;0;0;0;0;0
Dissecting alterations in human CD8+T cells with aging by high-dimensional single cell mass cytometry;"Shin, Min Sun; Yim, Kristina; Moon, Kevin; Park, Hong-Jai; Mohanty, Subhasis; Kim, Joseph W.; Montgomery, Ruth R.; Shaw, Albert C.; Krishnaswamy, Smita; Kang, Insoo";;;;CLINICAL IMMUNOLOGY;MAR 2019;2019;200;;;;;24;30;;10.1016/j.clim.2019.01.005;;;0;0;0;0;0;0;0;0;0;0;0;0
Enumeration of Rare Cells in Whole Blood by Signal Ion Emission Reactive Release Amplification with Same-Sample RNA Analysis;"Baird, Zane; Cao, Zehui; Barron, M. Regina; Vorsilak, Anna; Deiss, Frederique; Pugia, Michael";;;;ANALYTICAL CHEMISTRY;FEB 5 2019;2019;91;3;;;;2028;2034;;10.1021/acs.analchem.8b04446;;;0;0;0;0;0;0;0;0;0;0;0;0
In Silico Methods for Studying T Cell Biology;"Grzesik, Katherine; Eng, Kevin; Crauste, Fabien; Battaglia, Sebastiano";;;"Galluzzi, L; Rudqvist, NP";BIOLOGY OF T CELLS - PT B;2019;2019;342;;;;;265;304;;10.1016/bs.ircmb.2018.07.005;;;0;0;0;0;0;0;0;0;0;0;0;0
Setting Up Mass Cytometry in a Shared Resource Lab Environment;"Warth, Sarah; Kunkel, Desiree";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;3;11;;10.1007/978-1-4939-9454-0_1;;;0;0;0;0;0;0;0;0;0;0;0;0
Visualization of Mass Cytometry Signal Background to Enable Optimal Core Panel Customization and Signal Threshold Gating;"Au-Yeung, Amelia; Takahashi, Chikara; Mathews, W. Rodney; O'Gorman, William E.";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;35;45;;10.1007/978-1-4939-9454-0_3;;;0;0;0;0;0;0;0;0;0;0;0;0
Method for Tagging Antibodies with Metals for Mass Cytometry Experiments;"Chang, Stephen Gregory; Guidos, Cynthia J.";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;47;54;;10.1007/978-1-4939-9454-0_4;;;0;0;0;0;0;0;0;0;0;0;0;0
Titration of Mass Cytometry Reagents;"van Vreden, Caryn; Niewold, Paula; McGuire, Helen M.; de St Groth, Barbara Fazekas";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;83;92;;10.1007/978-1-4939-9454-0_6;;;0;0;0;0;0;0;0;0;0;0;0;0
Automated Cell Processing for Mass Cytometry Experiments;"Mikes, Jaromir; Olin, Axel; Lakshmikanth, Tadepally; Chen, Yang; Brodin, Petter";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;111;123;;10.1007/978-1-4939-9454-0_8;;;0;0;0;0;0;0;0;0;0;0;0;0
Mass Cytometric Cell Cycle Analysis;Behbehani, Gregory K.;;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;193;215;;10.1007/978-1-4939-9454-0_13;;;0;0;0;0;0;0;0;0;0;0;0;0
Quantitative Measurement of Cell-Nanoparticle Interactions Using Mass Cytometry;"Mitchell, Andrew J.; Ivask, Angela; Ju, Yi";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;227;241;;10.1007/978-1-4939-9454-0_15;;;0;0;0;0;0;0;0;0;0;0;0;0
Data-Driven Flow Cytometry Analysis;"Wang, Sherrie; Brinkman, Ryan R.";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;245;265;;10.1007/978-1-4939-9454-0_16;;;0;0;0;0;0;0;0;0;0;0;0;0
Analysis of Mass Cytometry Data;"Pedersen, Christina B.; Olsen, Lars R.";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;267;279;;10.1007/978-1-4939-9454-0_17;;;0;0;0;0;0;0;0;0;0;0;0;0
Analysis of High-Dimensional Phenotype Data Generated by Mass Cytometry or High-Dimensional Flow Cytometry;"Cirovic, Branko; Katzmarski, Natalie; Schlitzer, Andreas";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;281;294;;10.1007/978-1-4939-9454-0_18;;;0;0;0;0;0;0;0;0;0;0;0;0
Computational Analysis of High-Dimensional Mass Cytometry Data from Clinical Tissue Samples;"Norton, Sam; Kemp, Roslyn";;;"McGuire, HM; Ashhurst, TM";MASS CYTOMETRY: METHODS AND PROTOCOLS;2019;2019;1989;;;;;295;307;;10.1007/978-1-4939-9454-0_19;;;0;0;0;0;0;0;0;0;0;0;0;0
Immunophenotyping of Human Peripheral Blood Mononuclear Cells by Mass Cytometry;"Heck, Susanne; Bishop, Cynthia Jane; Ellis, Richard Jonathan";;;Proserpio, V;SINGLE CELL METHODS: SEQUENCING AND PROTEOMICS;2019;2019;1979;;;;;285;303;;10.1007/978-1-4939-9240-9_18;;;0;0;0;0;0;0;0;0;0;0;0;0
Proteomic tools and new insights for the study of B-cell precursor acute lymphoblastic leukemia;"Citalan-Madrid, Ali F.; Cabral-Pacheco, Griselda A.; Martinez-de-Villarreal, Laura E.; Villarreal-Martinez, Laura; Ibarra-Ramirez, Marisol; Garza-Veloz, Idalia; Cardenas-Vargas, Edith; Marino-Martinez, Ivan; Martinez-Fierro, Margarita L.";;;;HEMATOLOGY;JAN 1 2019;2019;24;1;;;;637;650;;10.1080/16078454.2019.1664127;;;0;0;0;0;0;0;0;0;0;0;0;0
Mass cytometry reveals species-specific differences and a new level of complexity for immune cells in the prostate;"Fox, Jonathan J.; Navarro, Hector, I; Hashimoto, Takao; Garcia, Alejandro J.; Goldstein, Andrew S.";;;;AMERICAN JOURNAL OF CLINICAL AND EXPERIMENTAL UROLOGY;2019;2019;7;4;;;;281;+;;;;;0;0;0;0;0;0;0;0;0;0;0;0
Implementation of Mass Cytometry for Immunoprofiling of Patients with Solid Tumors;"Polakova, Ingrid; Pelak, Ondrej; Thurner, Daniel; Pokryvkova, Barbora; Tachezy, Ruth; Kalina, Tomas; Smahel, Michal";;;;JOURNAL OF IMMUNOLOGY RESEARCH;2019;2019;;;;;;;;6705949;10.1155/2019/6705949;;;0;0;0;0;0;0;0;0;0;0;0;0
Advanced imaging technology applications in cytology;"Pantanowitz, Liron; Preffer, Frederic; Wilbur, David C.";;;;DIAGNOSTIC CYTOPATHOLOGY;JAN 2019;2019;47;1;;;SI;5;14;;10.1002/dc.23898;;;0;0;0;0;0;0;0;0;0;0;0;0
Effect of CTLA4-Ig (abatacept) treatment on T cells and B cells in peripheral blood of patients with polymyositis and dermatomyositis;"Tang, Quan; Ramskold, Daniel; Krystufkova, Olga; Mann, Herman F.; Wick, Cecilia; Dastmalchi, Maryam; Lakshmikanth, Tadepally; Chen, Yang; Mikes, Jaromir; Alexanderson, Helene; Achour, Adnane; Brodin, Petter; Vencovsky, Jiri; Lundberg, Ingrid E.; Malmstrom, Vivianne";;;;SCANDINAVIAN JOURNAL OF IMMUNOLOGY;JAN 2019;2019;89;1;;;;;;UNSP e12732;10.1111/sji.12732;;;0;0;0;0;0;0;0;0;0;0;0;0
Advancing systems immunology through data-driven statistical analysis;"Fong, Linda E.; Munoz-Rojas, Andres R.; Miller-Jensen, Kathryn";;;;CURRENT OPINION IN BIOTECHNOLOGY;AUG 2018;2018;52;;;;;109;115;;10.1016/j.copbio.2018.03.009;;;0;0;0;0;0;0;0;0;0;0;0;0
Calibration-free quantitative immunoassay by flow cytometry: Theoretical consideration and practical implementation for IgG antibody binding to CD14 receptors on human leukocytes;"Khalo, Irina V.; Kozyreva, Viktoriya S.; Vakhrushev, Roman V.; Patlai, Daria S.; Shilova, Anna N.; Karpenko, Andrei A.; Yurkin, Maxim A.; Moskalensky, Alexander E.; Strokotov, Dmitry I.; Maltsev, Valeri P.; Chernyshev, Andrei V.";;;;CYTOMETRY PART A;JUL 2018;2018;93A;7;;;;695;705;;10.1002/cyto.a.23494;;;0;0;0;0;0;0;0;0;0;0;0;0
Single-cell Analysis of Immunophenotype and Cytokine Production in Peripheral Whole Blood via Mass Cytometry;"Baxter, Ryan M.; Kong, Daniel S.; Garcia-Perez, Josselyn E.; O'Gorman, William E.; Hsieh, Elena W. Y.";;;;JOVE-JOURNAL OF VISUALIZED EXPERIMENTS;JUN 2018;2018;;136;;;;;;e57780;10.3791/57780;;;0;0;0;0;0;0;0;0;0;0;0;0
Single-Cell ICP-MS Analysis: Quantifying the Metal Concentration of Unicellular Organisms at the Cellular Level;"Merrifield, Ruth; Amable, Lauren; Stephan, Chady";;;;SPECTROSCOPY;JUN 2018;2018;33;6;;;;33;39;;;;;0;0;0;0;0;0;0;0;0;0;0;0
beachmat: A Bioconductor C plus plus API for accessing high-throughput biological data from a variety of R matrix types;"Lun, Aaron T. L.; Pages, Herve A.; Smith, Mike L.";;;;PLOS COMPUTATIONAL BIOLOGY;MAY 2018;2018;14;5;;;;;;e1006135;10.1371/journal.pcbi.1006135;;;0;0;0;0;0;0;0;0;0;0;0;0
Development of a Click-Chemistry Reagent Compatible with Mass Cytometry;"Shaklee, Jessica; Srivastava, Kriti; Brown, Heather; Arriaga, Edgar A.; Pierre, Valerie C.; van Berlo, Jop H.";;;;SCIENTIFIC REPORTS;APR 27 2018;2018;8;;;;;;;6657;10.1038/s41598-018-25000-y;;;0;0;0;0;0;0;0;0;0;0;0;0
Single Cell Proteomics for Molecular Targets in Lung Cancer: High-Dimensional Data Acquisition and Analysis;"Wang, Zheng; Zhang, Xiaoju";;;"Gu, J; Wang, X";SINGLE CELL BIOMEDICINE;2018;2018;1068;;;;;73;87;;10.1007/978-981-13-0502-3_7;;;0;0;0;0;0;0;0;0;0;0;0;0
Single-cell mass cytometry and machine learning predict relapse in childhood leukemia;"Sarno, Jolanda; Davis, Kara L.";;;;MOLECULAR & CELLULAR ONCOLOGY;2018;2018;5;5;;;;;;e1472057;10.1080/23723556.2018.1472057;;;0;0;0;0;0;0;0;0;0;0;0;0
Single-Cell Protein Assays: A Review;"Fan, Beiyuan; Wang, Junbo; Xu, Ying; Chen, Jian";;;Huang, T;COMPUTATIONAL SYSTEMS BIOLOGY: METHODS AND PROTOCOLS;2018;2018;1754;;;;;293;309;;10.1007/978-1-4939-7717-8_17;;;0;0;0;0;0;0;0;0;0;0;0;0
Immunological Methods and the Concept of Inflammaging in the Study of Human Aging;"Fulop, Tamas; Pawelec, Graham; Witkowski, Jacek M.; Cohen, Alan A.; Fortin, Carl; Le Page, Aurelie; Garneau, Hugo; Dupuis, Gilles; Larbi, Anis";;;"Ram, JL; Conn, PM";CONN'S HANDBOOK OF MODELS FOR HUMAN AGING, 2ND EDITION;2018;2018;;;;;;45;58;;10.1016/B978-0-12-811353-0.00004-X;;;0;0;0;0;0;0;0;0;0;0;0;0
Feature screening in large scale cluster analysis;"Banerjee, Trambak; Mukherjee, Gourab; Radchenko, Peter";;;;JOURNAL OF MULTIVARIATE ANALYSIS;SEP 2017;2017;161;;;;;191;212;;10.1016/j.jmva.2017.08.001;;;0;0;0;0;0;0;0;0;0;0;0;0
Alternative Approaches for Analysis of Complex Data Sets in Flow Cytometry;Gondhalekar, Carmen;;;"Robinson, JP; Cossarizza, A";SINGLE CELL ANALYSIS: CONTEMPORARY RESEARCH AND CLINICAL APPLICATIONS;2017;2017;;;;;;201;225;;10.1007/978-981-10-4499-1_9;;;0;0;0;0;0;0;0;0;0;0;0;0
Integrated Strategies to Gain a Systems-Level View of Dynamic Signaling Networks;"Newman, Robert H.; Zhang, Jin";;;"Thompson, RB; Fierke, CA";ENZYMES AS SENSORS;2017;2017;589;;;;;133;170;;10.1016/bs.mie.2017.01.016;;;0;0;0;0;0;0;0;0;0;0;0;0
Novel Applications of Lanthanoides as Analytical or Diagnostic Tools in the Life Sciences by ICP-MS-based Techniques;"Mueller, Larissa; Traub, Heike; Jakubowski, Norbert";;;;PHYSICAL SCIENCES REVIEWS;NOV 2016;2016;1;11;;;;;;UNSP 20160064;10.1515/psr-2016-0064;;;0;0;0;0;0;0;0;0;0;0;0;0
Flow Cytometric Characterization of Antigen-Specific T Cells Based on RNA and Its Advantages in Detecting Infections and Immunological Disorders;"Radford, Felix; Tyagi, Sanjay; Gennaro, Maria Laura; Pine, Richard; Bushkin, Yuri";;;;CRITICAL REVIEWS IN IMMUNOLOGY;2016;2016;36;5;;;;359;378;;10.1615/CritRevImmunol.2017018316;;;0;0;0;0;0;0;0;0;0;0;0;0
Learning Latent Variable Models by Pairwise Cluster Comparison Part II - Algorithm and Evaluation;"Asbeh, Nuaman; Lerner, Boaz";;;;JOURNAL OF MACHINE LEARNING RESEARCH;2016;2016;17;;;;;;;233;;;;0;0;0;0;0;0;0;0;0;0;0;0
Application of Quantitative Biomeasures in Early Drug Discovery;"Fountain, Scott T.; Vicini, Paolo";;;"Weiner, R; Kelley, M";TRANSLATING MOLECULAR BIOMARKERS INTO CLINICAL ASSAYS: TECHNIQUES AND APPLICATIONS;2016;2016;21;;;;;37;46;;10.1007/978-3-319-40793-7_4;;;0;0;0;0;0;0;0;0;0;0;0;0
New Technologies for Cellular Analysis;"O'Brien, Peter J.; Wyant, Tim; Litwin, Virginia";;;"Weiner, R; Kelley, M";TRANSLATING MOLECULAR BIOMARKERS INTO CLINICAL ASSAYS: TECHNIQUES AND APPLICATIONS;2016;2016;21;;;;;127;140;;10.1007/978-3-319-40793-7_12;;;0;0;0;0;0;0;0;0;0;0;0;0
Combinatorial Application of Multiple High-throughput Biotechnologies for the Study of Autoimmune Diseases;"Xun, Yiping; Chen, Guangyu; Du, Hongwu";;;;CURRENT PHARMACEUTICAL ANALYSIS;2015;2015;11;3;;;;156;163;;;;;0;0;0;0;0;0;0;0;0;0;0;0