Input fasta: test.fasta
Metaproteome used: bigg2-eco41
Report date: 20-11-02
MetaDraft version: 0.9.3
Reaction | Name | Model | Source |
R_ACGAMT | UDP-N-acetylglucosamine:undecaprenylphosphate N-acetylglucosamine -1-phosphate transferase | bigg2-eco41 | stu0163 |
R_ACGApts | N-Acetyl-D-glucosamine transport via PEP:Pyr PTS | bigg2-eco41 | stu1264,stu1265 |
R_ACMANApts | N-acetyl-D-mannosamine transport via PTS | bigg2-eco41 | stu1264,stu1265 |
R_ACONT | Aconitate hydratase | bigg2-eco41 | stu1268 |
R_AGDC | N-acetylglucosamine-6-phosphate deacetylase | bigg2-eco41 | stu0501 |
R_ALAALAr | D-alanine-D-alanine ligase (reversible) | bigg2-eco41 | stu1583 |
R_ALCD19 | Alcohol dehydrogenase (glycerol) | bigg2-eco41 | stu0936 |
R_AMALT1 | Amylomaltase (maltotriose) | bigg2-eco41 | stu1013 |
R_AMALT2 | Amylomaltase (maltotetraose) | bigg2-eco41 | stu1013 |
R_AMALT3 | Amylomaltase (maltopentaose) | bigg2-eco41 | stu1013 |
R_AMALT4 | Amylomaltase (maltohexaose) | bigg2-eco41 | stu1013 |
R_ASPabc | L-aspartate transport via ABC system | bigg2-eco41 | stu1164 |
R_CYSS | Cysteine synthase | bigg2-eco41 | stu0846 |
R_DHAPT | Dihydroxyacetone phosphotransferase | bigg2-eco41 | stu1264,stu1265 |
R_DHBSr | 2,3-dihydroxybenzoate adenylate synthase | bigg2-eco41 | stu0761 |
R_FRUpts | D-fructose transport via PEP:Pyr PTS | bigg2-eco41 | stu1264,stu1265 |
R_FRUpts2 | Fructose transport via PEP:Pyr PTS (f6p generating) | bigg2-eco41 | stu1264,stu1265 |
R_GALTpts | Galactitol transport via PEP:Pyr PTS | bigg2-eco41 | stu1264,stu1265 |
R_GAMpts | D-glucosamine transport via PEP:Pyr PTS | bigg2-eco41 | stu1264,stu1265 |
R_GLCP | Glycogen phosphorylase | bigg2-eco41 | stu1012 |
R_GLCpts | D-glucose transport via PEP:Pyr PTS | bigg2-eco41 | stu1264,stu1265 |
R_GLNabc | L-glutamine transport via ABC system | bigg2-eco41 | stu0606,stu1492 |
R_GLU5K | Glutamate 5-kinase | bigg2-eco41 | stu1711 |
R_GLUabc | L-glutamate transport via ABC system | bigg2-eco41 | stu1164 |
R_ICDHyr | Isocitrate dehydrogenase (NADP) | bigg2-eco41 | stu1266 |
R_ILETA | Isoleucine transaminase | bigg2-eco41 | stu0590 |
R_Kt2r | Potassium reversible transport via proton symport | bigg2-eco41 | stu0264 |
R_LCADi_copy1 | bigg2-eco41 | stu0936 | |
R_LEUTAi | Leucine transaminase (irreversible) | bigg2-eco41 | stu0590 |
R_MALTpts | Maltose transport via PEP:Pyr PTS | bigg2-eco41 | stu1264,stu1265 |
R_MANpts | D-mannose transport via PEP:Pyr PTS | bigg2-eco41 | stu1264,stu1265 |
R_MCITS | 2-methylcitrate synthase | bigg2-eco41 | stu1267 |
R_METS_1 | Methionine synthase | bigg2-eco41 | stu0785 |
R_MICITDr | 2-methylisocitrate dehydratase | bigg2-eco41 | stu1268 |
R_MNLpts | Mannitol transport via PEP:Pyr PTS | bigg2-eco41 | stu1264,stu1265 |
R_OBTFL | 2-Oxobutanoate formate lyase | bigg2-eco41 | stu1640 |
R_OCBT | Ornithine carbamoyltransferase | bigg2-eco41 | stu0603 |
R_PFL | Pyruvate formate lyase | bigg2-eco41 | stu1640 |
R_PGM | Phosphoglycerate mutase | bigg2-eco41 | stu0697 |
R_PHETA1 | Phenylalanine transaminase | bigg2-eco41 | stu0590 |
R_PRPPS | Phosphoribosylpyrophosphate synthetase | bigg2-eco41 | stu1460 |
R_PTPATi | Pantetheine-phosphate adenylyltransferase | bigg2-eco41 | stu1648 |
R_SBTpts | D-sorbitol transport via PEP:Pyr PTS | bigg2-eco41 | stu1264,stu1265 |
R_SERAT | Serine O-acetyltransferase | bigg2-eco41 | stu0848 |
R_SHSL1 | O-succinylhomoserine lyase (L-cysteine) | bigg2-eco41 | stu0847 |
R_SPODM | Superoxide dismutase | bigg2-eco41 | stu0720 |
R_SUCpts | Sucrose transport via PEP:Pyr PTS | bigg2-eco41 | stu1264,stu1265 |
R_THZPSN | Thiazole phosphate synthesis | bigg2-eco41 | stu1461 |
R_TREpts | Trehalose transport via PEP:Pyr PTS | bigg2-eco41 | stu1264,stu1265 |
R_TRPS1 | Tryptophan synthase (indoleglycerol phosphate) | bigg2-eco41 | stu1588 |
R_TRPS2 | Tryptophan synthase (indole) | bigg2-eco41 | stu1588 |
R_TRPS3 | Tryptophan synthase (indoleglycerol phosphate) | bigg2-eco41 | stu1588 |
R_UAGCVT | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | bigg2-eco41 | stu1167 |
R_UDPG4E | UDPglucose 4-epimerase | bigg2-eco41 | stu1169 |
R_UPPRT | Uracil phosphoribosyltransferase | bigg2-eco41 | stu0355 |
R_VALTA | Valine transaminase | bigg2-eco41 | stu0590 |
Reaction | Name | Model | Source |
Organism | bigg2-eco41 |
R_ACGAMT (irreversble) | UDP-N-acetylglucosamine:undecaprenylphosphate N-acetylglucosamine -1-phosphate transferase |
Association | b3784 |
Association new | (stu0163) |
Equation ID | M_udcpp_c + M_uacgam_c > M_ump_c + M_unaga_c |
Equation Name | Undecaprenyl phosphate + UDP-N-acetyl-D-glucosamine > UMP C9H11N2O9P + Undecaprenyl diphospho N-acetyl-glucosamine |
Substrates | |
M_udcpp_c | Undecaprenyl phosphate |
charge: -2 | C55H89O4P |
M_uacgam_c | UDP-N-acetyl-D-glucosamine |
charge: -2 | C17H25N3O17P2 |
Products | |
M_ump_c | UMP C9H11N2O9P |
charge: -2 | C9H11N2O9P |
M_unaga_c | Undecaprenyl diphospho N-acetyl-glucosamine |
charge: -2 | C63H103NO12P2 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/ACGAMT |
is | http://identifiers.org/metanetx.reaction/MNXR95251 |
Organism | bigg2-eco41 |
R_ACGApts (irreversble) | N-Acetyl-D-glucosamine transport via PEP:Pyr PTS |
Association | (((b2416 and b2415 and b0679) or (b2416 and b2417 and b2415 and b1101))) |
Association new | (stu1264 and stu1265) |
Equation ID | M_acgam_e + M_pep_c > M_pyr_c + M_acgam6p_c |
Equation Name | N-Acetyl-D-glucosamine + Phosphoenolpyruvate > Pyruvate + N-Acetyl-D-glucosamine 6-phosphate |
Substrates | |
M_acgam_e | N-Acetyl-D-glucosamine |
charge: 0 | C8H15NO6 |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
Products | |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
M_acgam6p_c | N-Acetyl-D-glucosamine 6-phosphate |
charge: -2 | C8H14NO9P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/ACGApts |
is | http://identifiers.org/metanetx.reaction/MNXR95253 |
Organism | bigg2-eco41 |
R_ACMANApts (irreversble) | N-acetyl-D-mannosamine transport via PTS |
Association | ((b2416 and b1819 and b2415 and b1817 and b1818)) |
Association new | (stu1264 and stu1265) |
Equation ID | M_pep_c + M_acmana_e > M_pyr_c + M_acmanap_c |
Equation Name | Phosphoenolpyruvate + N-Acetyl-D-mannosamine > Pyruvate + N-Acetyl-D-mannosamine 6-phosphate |
Substrates | |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
M_acmana_e | N-Acetyl-D-mannosamine |
charge: 0 | C8H15NO6 |
Products | |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
M_acmanap_c | N-Acetyl-D-mannosamine 6-phosphate |
charge: -2 | C8H14NO9P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/ACMANApts |
is | http://identifiers.org/metanetx.reaction/MNXR95275 |
Organism | bigg2-eco41 |
R_ACONT (reversible) | Aconitate hydratase |
Association | ((b1276 or b0118)) |
Association new | (stu1268) |
Equation ID | M_cit_c = M_icit_c |
Equation Name | Citrate = Isocitrate |
Substrates | |
M_cit_c | Citrate |
charge: -3 | C6H5O7 |
Products | |
M_icit_c | Isocitrate |
charge: -3 | C6H5O7 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/ACONT |
is | http://identifiers.org/ec-code/4.2.1.3 |
is | http://identifiers.org/kegg.reaction/R01324 |
is | http://identifiers.org/metanetx.reaction/MNXR95384 |
is | http://identifiers.org/rhea/10336 |
is | http://identifiers.org/rhea/10337 |
is | http://identifiers.org/rhea/10338 |
is | http://identifiers.org/rhea/10339 |
Organism | bigg2-eco41 |
R_AGDC (irreversble) | N-acetylglucosamine-6-phosphate deacetylase |
Association | b0677 |
Association new | (stu0501) |
Equation ID | M_h2o_c + M_acgam6p_c > M_ac_c + M_gam6p_c |
Equation Name | H2O H2O + N-Acetyl-D-glucosamine 6-phosphate > Acetate + D-Glucosamine 6-phosphate |
Substrates | |
M_h2o_c | H2O H2O |
charge: 0 | H2O |
M_acgam6p_c | N-Acetyl-D-glucosamine 6-phosphate |
charge: -2 | C8H14NO9P |
Products | |
M_ac_c | Acetate |
charge: -1 | C2H3O2 |
M_gam6p_c | D-Glucosamine 6-phosphate |
charge: -1 | C6H13NO8P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/AGDC |
is | http://identifiers.org/biocyc/META:NAG6PDEACET-RXN |
is | http://identifiers.org/ec-code/3.5.1.25 |
is | http://identifiers.org/kegg.reaction/R02059 |
is | http://identifiers.org/metanetx.reaction/MNXR95528 |
is | http://identifiers.org/rhea/22936 |
is | http://identifiers.org/rhea/22937 |
is | http://identifiers.org/rhea/22938 |
is | http://identifiers.org/rhea/22939 |
Organism | bigg2-eco41 |
R_ALAALAr (reversible) | D-alanine-D-alanine ligase (reversible) |
Association | ((b0381 or b0092)) |
Association new | (stu1583) |
Equation ID | M_atp_c + (-2.0) M_ala__D_c = M_pi_c + M_alaala_c + M_adp_c + M_h_c |
Equation Name | ATP C10H12N5O13P3 + (-2.0) D-Alanine = Phosphate + D-Alanyl-D-alanine + ADP C10H12N5O10P2 + H+ |
Substrates | |
M_atp_c | ATP C10H12N5O13P3 |
charge: -4 | C10H12N5O13P3 |
M_ala__D_c | D-Alanine |
charge: 0 | C3H7NO2 |
Products | |
M_pi_c | Phosphate |
charge: -2 | HO4P |
M_alaala_c | D-Alanyl-D-alanine |
charge: 0 | C6H12N2O3 |
M_adp_c | ADP C10H12N5O10P2 |
charge: -3 | C10H12N5O10P2 |
M_h_c | H+ |
charge: 1 | H |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/ALAALAr |
is | http://identifiers.org/biocyc/META:DALADALALIG-RXN |
is | http://identifiers.org/ec-code/6.3.2.4 |
is | http://identifiers.org/kegg.reaction/R01150 |
is | http://identifiers.org/metanetx.reaction/MNXR95678 |
is | http://identifiers.org/rhea/11224 |
is | http://identifiers.org/rhea/11225 |
is | http://identifiers.org/rhea/11226 |
is | http://identifiers.org/rhea/11227 |
Organism | bigg2-eco41 |
R_ALCD19 (reversible) | Alcohol dehydrogenase (glycerol) |
Association | b0356 |
Association new | (stu0936) |
Equation ID | M_h_c + M_nadh_c + M_glyald_c = M_glyc_c + M_nad_c |
Equation Name | H+ + Nicotinamide adenine dinucleotide - reduced + D-Glyceraldehyde = Glycerol + Nicotinamide adenine dinucleotide |
Substrates | |
M_h_c | H+ |
charge: 1 | H |
M_nadh_c | Nicotinamide adenine dinucleotide - reduced |
charge: -2 | C21H27N7O14P2 |
M_glyald_c | D-Glyceraldehyde |
charge: 0 | C3H6O3 |
Products | |
M_glyc_c | Glycerol |
charge: 0 | C3H8O3 |
M_nad_c | Nicotinamide adenine dinucleotide |
charge: -1 | C21H26N7O14P2 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/ALCD19 |
is | http://identifiers.org/ec-code/1.1.1.21 |
is | http://identifiers.org/ec-code/1.1.1.72 |
is | http://identifiers.org/kegg.reaction/R01036 |
is | http://identifiers.org/metanetx.reaction/MNXR95709 |
is | http://identifiers.org/rhea/30027 |
is | http://identifiers.org/rhea/30028 |
is | http://identifiers.org/rhea/30029 |
is | http://identifiers.org/rhea/30030 |
Organism | bigg2-eco41 |
R_AMALT1 (irreversble) | Amylomaltase (maltotriose) |
Association | b3416 |
Association new | (stu1013) |
Equation ID | M_malttr_c + M_malt_c > M_glc__D_c + M_maltttr_c |
Equation Name | Maltotriose C18H32O16 + Maltose C12H22O11 > D-Glucose + Maltotetraose |
Substrates | |
M_malttr_c | Maltotriose C18H32O16 |
charge: 0 | C18H32O16 |
M_malt_c | Maltose C12H22O11 |
charge: 0 | C12H22O11 |
Products | |
M_glc__D_c | D-Glucose |
charge: 0 | C6H12O6 |
M_maltttr_c | Maltotetraose |
charge: 0 | C24H42O21 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/AMALT1 |
is | http://identifiers.org/biocyc/META:AMYLOMALT-RXN |
is | http://identifiers.org/ec-code/2.4.1.25 |
is | http://identifiers.org/metanetx.reaction/MNXR95800 |
Organism | bigg2-eco41 |
R_AMALT2 (irreversble) | Amylomaltase (maltotetraose) |
Association | b3416 |
Association new | (stu1013) |
Equation ID | M_malt_c + M_maltttr_c > M_maltpt_c + M_glc__D_c |
Equation Name | Maltose C12H22O11 + Maltotetraose > Maltopentaose + D-Glucose |
Substrates | |
M_malt_c | Maltose C12H22O11 |
charge: 0 | C12H22O11 |
M_maltttr_c | Maltotetraose |
charge: 0 | C24H42O21 |
Products | |
M_maltpt_c | Maltopentaose |
charge: 0 | C30H52O26 |
M_glc__D_c | D-Glucose |
charge: 0 | C6H12O6 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/AMALT2 |
is | http://identifiers.org/biocyc/META:RXN-14260 |
is | http://identifiers.org/ec-code/2.4.1.25 |
is | http://identifiers.org/metanetx.reaction/MNXR95801 |
Organism | bigg2-eco41 |
R_AMALT3 (irreversble) | Amylomaltase (maltopentaose) |
Association | b3416 |
Association new | (stu1013) |
Equation ID | M_maltpt_c + M_malt_c > M_glc__D_c + M_malthx_c |
Equation Name | Maltopentaose + Maltose C12H22O11 > D-Glucose + Maltohexaose |
Substrates | |
M_maltpt_c | Maltopentaose |
charge: 0 | C30H52O26 |
M_malt_c | Maltose C12H22O11 |
charge: 0 | C12H22O11 |
Products | |
M_glc__D_c | D-Glucose |
charge: 0 | C6H12O6 |
M_malthx_c | Maltohexaose |
charge: 0 | C36H62O31 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/AMALT3 |
is | http://identifiers.org/biocyc/META:RXN-14261 |
is | http://identifiers.org/ec-code/2.4.1.25 |
is | http://identifiers.org/metanetx.reaction/MNXR95802 |
Organism | bigg2-eco41 |
R_AMALT4 (irreversble) | Amylomaltase (maltohexaose) |
Association | b3416 |
Association new | (stu1013) |
Equation ID | M_malt_c + M_malthx_c > M_glc__D_c + M_malthp_c |
Equation Name | Maltose C12H22O11 + Maltohexaose > D-Glucose + Maltoheptaose |
Substrates | |
M_malt_c | Maltose C12H22O11 |
charge: 0 | C12H22O11 |
M_malthx_c | Maltohexaose |
charge: 0 | C36H62O31 |
Products | |
M_glc__D_c | D-Glucose |
charge: 0 | C6H12O6 |
M_malthp_c | Maltoheptaose |
charge: 0 | C42H72O36 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/AMALT4 |
is | http://identifiers.org/biocyc/META:MALTODEG-RXN |
is | http://identifiers.org/ec-code/2.4.1.25 |
is | http://identifiers.org/metanetx.reaction/MNXR95803 |
Organism | bigg2-eco41 |
R_ASPabc (irreversble) | L-aspartate transport via ABC system |
Association | ((b0654 and b0655 and b0652 and b0653)) |
Association new | (stu1164) |
Equation ID | M_asp__L_e + M_h2o_c + M_atp_c > M_pi_c + M_asp__L_c + M_adp_c + M_h_c |
Equation Name | L-Aspartate + H2O H2O + ATP C10H12N5O13P3 > Phosphate + L-Aspartate + ADP C10H12N5O10P2 + H+ |
Substrates | |
M_asp__L_e | L-Aspartate |
charge: -1 | C4H6NO4 |
M_h2o_c | H2O H2O |
charge: 0 | H2O |
M_atp_c | ATP C10H12N5O13P3 |
charge: -4 | C10H12N5O13P3 |
Products | |
M_pi_c | Phosphate |
charge: -2 | HO4P |
M_asp__L_c | L-Aspartate |
charge: -1 | C4H6NO4 |
M_adp_c | ADP C10H12N5O10P2 |
charge: -3 | C10H12N5O10P2 |
M_h_c | H+ |
charge: 1 | H |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/ASPabc |
is | http://identifiers.org/biocyc/META:TRANS-RXN0-222 |
is | http://identifiers.org/ec-code/3.6.3.21 |
is | http://identifiers.org/metanetx.reaction/MNXR96103 |
is | http://identifiers.org/rhea/29039#1 |
is | http://identifiers.org/rhea/29040#1 |
is | http://identifiers.org/rhea/29041#1 |
is | http://identifiers.org/rhea/29042#1 |
Organism | bigg2-eco41 |
R_CYSS (irreversble) | Cysteine synthase |
Association | ((b2414 or b2421)) |
Association new | (stu0846) |
Equation ID | M_h2s_c + M_acser_c > M_ac_c + M_cys__L_c + M_h_c |
Equation Name | Hydrogen sulfide + O-Acetyl-L-serine > Acetate + L-Cysteine + H+ |
Substrates | |
M_h2s_c | Hydrogen sulfide |
charge: 0 | H2S |
M_acser_c | O-Acetyl-L-serine |
charge: 0 | C5H9NO4 |
Products | |
M_ac_c | Acetate |
charge: -1 | C2H3O2 |
M_cys__L_c | L-Cysteine |
charge: 0 | C3H7NO2S |
M_h_c | H+ |
charge: 1 | H |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/CYSS |
is | http://identifiers.org/biocyc/META:ACSERLY-RXN |
is | http://identifiers.org/ec-code/2.5.1.47 |
is | http://identifiers.org/ec-code/2.5.1.65 |
is | http://identifiers.org/kegg.reaction/R00897 |
is | http://identifiers.org/metanetx.reaction/MNXR97007 |
is | http://identifiers.org/rhea/14829 |
is | http://identifiers.org/rhea/14830 |
is | http://identifiers.org/rhea/14831 |
is | http://identifiers.org/rhea/14832 |
Organism | bigg2-eco41 |
R_DHAPT (irreversble) | Dihydroxyacetone phosphotransferase |
Association | ((b2416 and b1200 and b2415 and b1198 and b1199)) |
Association new | (stu1264 and stu1265) |
Equation ID | M_pep_c + M_dha_c > M_pyr_c + M_dhap_c |
Equation Name | Phosphoenolpyruvate + Dihydroxyacetone > Pyruvate + Dihydroxyacetone phosphate |
Substrates | |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
M_dha_c | Dihydroxyacetone |
charge: 0 | C3H6O3 |
Products | |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
M_dhap_c | Dihydroxyacetone phosphate |
charge: -2 | C3H5O6P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/DHAPT |
is | http://identifiers.org/biocyc/META:2.7.1.121-RXN |
is | http://identifiers.org/ec-code/2.7.1.121 |
is | http://identifiers.org/kegg.reaction/R01012 |
is | http://identifiers.org/metanetx.reaction/MNXR97364 |
is | http://identifiers.org/rhea/18381 |
is | http://identifiers.org/rhea/18382 |
is | http://identifiers.org/rhea/18383 |
is | http://identifiers.org/rhea/18384 |
Organism | bigg2-eco41 |
R_DHBSr (reversible) | 2,3-dihydroxybenzoate adenylate synthase |
Association | b0594 |
Association new | (stu0761) |
Equation ID | M_atp_c + M_23dhb_c = M_ppi_c + M_23dhba_c |
Equation Name | ATP C10H12N5O13P3 + 2,3-Dihydroxybenzoate = Diphosphate + (2,3-Dihydroxybenzoyl)adenylate |
Substrates | |
M_atp_c | ATP C10H12N5O13P3 |
charge: -4 | C10H12N5O13P3 |
M_23dhb_c | 2,3-Dihydroxybenzoate |
charge: -1 | C7H5O4 |
Products | |
M_ppi_c | Diphosphate |
charge: -3 | HO7P2 |
M_23dhba_c | (2,3-Dihydroxybenzoyl)adenylate |
charge: -2 | C17H16N5O10P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/DHBSr |
is | http://identifiers.org/biocyc/META:DHBAMPLIG-RXN |
is | http://identifiers.org/ec-code/2.7.7.58 |
is | http://identifiers.org/kegg.reaction/R01504 |
is | http://identifiers.org/metanetx.reaction/MNXR97369 |
is | http://identifiers.org/rhea/20229 |
is | http://identifiers.org/rhea/20230 |
is | http://identifiers.org/rhea/20231 |
is | http://identifiers.org/rhea/20232 |
Organism | bigg2-eco41 |
R_FRUpts (irreversble) | D-fructose transport via PEP:Pyr PTS |
Association | ((b2416 and b2169 and b2415 and b2167)) |
Association new | (stu1264 and stu1265) |
Equation ID | M_fru_e + M_pep_c > M_f1p_c + M_pyr_c |
Equation Name | D-Fructose + Phosphoenolpyruvate > D-Fructose 1-phosphate + Pyruvate |
Substrates | |
M_fru_e | D-Fructose |
charge: 0 | C6H12O6 |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
Products | |
M_f1p_c | D-Fructose 1-phosphate |
charge: -2 | C6H11O9P |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/FRUpts |
is | http://identifiers.org/metanetx.reaction/MNXR99661 |
Organism | bigg2-eco41 |
R_FRUpts2 (irreversble) | Fructose transport via PEP:Pyr PTS (f6p generating) |
Association | ((b2416 and b1817 and b1819 and b2415 and b1818)) |
Association new | (stu1264 and stu1265) |
Equation ID | M_fru_e + M_pep_c > M_pyr_c + M_f6p_c |
Equation Name | D-Fructose + Phosphoenolpyruvate > Pyruvate + D-Fructose 6-phosphate |
Substrates | |
M_fru_e | D-Fructose |
charge: 0 | C6H12O6 |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
Products | |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
M_f6p_c | D-Fructose 6-phosphate |
charge: -2 | C6H11O9P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/FRUpts2 |
is | http://identifiers.org/metanetx.reaction/MNXR99662 |
Organism | bigg2-eco41 |
R_GALTpts (irreversble) | Galactitol transport via PEP:Pyr PTS |
Association | ((b2416 and b2092 and b2415 and b2094 and b2093)) |
Association new | (stu1264 and stu1265) |
Equation ID | M_pep_c + M_galt_e > M_pyr_c + M_galt1p_c |
Equation Name | Phosphoenolpyruvate + Galactitol > Pyruvate + Galactitol 1-phosphate |
Substrates | |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
M_galt_e | Galactitol |
charge: 0 | C6H14O6 |
Products | |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
M_galt1p_c | Galactitol 1-phosphate |
charge: -2 | C6H13O9P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/GALTpts |
is | http://identifiers.org/metanetx.reaction/MNXR100018 |
Organism | bigg2-eco41 |
R_GAMpts (irreversble) | D-glucosamine transport via PEP:Pyr PTS |
Association | ((b2416 and b1819 and b2415 and b1817 and b1818)) |
Association new | (stu1264 and stu1265) |
Equation ID | M_pep_c + M_gam_e > M_pyr_c + M_gam6p_c |
Equation Name | Phosphoenolpyruvate + D-Glucosamine > Pyruvate + D-Glucosamine 6-phosphate |
Substrates | |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
M_gam_e | D-Glucosamine |
charge: 1 | C6H14NO5 |
Products | |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
M_gam6p_c | D-Glucosamine 6-phosphate |
charge: -1 | C6H13NO8P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/GAMpts |
is | http://identifiers.org/metanetx.reaction/MNXR100034 |
Organism | bigg2-eco41 |
R_GLCP (irreversble) | Glycogen phosphorylase |
Association | ((b3428 or b3417)) |
Association new | (stu1012) |
Equation ID | M_glycogen_c + M_pi_c > M_g1p_c |
Equation Name | Glycogen C6H10O5 + Phosphate > D-Glucose 1-phosphate |
Substrates | |
M_glycogen_c | Glycogen C6H10O5 |
charge: 0 | C6H10O5 |
M_pi_c | Phosphate |
charge: -2 | HO4P |
Products | |
M_g1p_c | D-Glucose 1-phosphate |
charge: -2 | C6H11O9P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/GLCP |
is | http://identifiers.org/metanetx.reaction/MNXR100214 |
Organism | bigg2-eco41 |
R_GLCpts (irreversble) | D-glucose transport via PEP:Pyr PTS |
Association | (((b2416 and b2417 and b2415 and b1101) or (b2416 and b1819 and b2415 and b1817 and b1818) or (b2416 and b2417 and b2415 and b1621))) |
Association new | (stu1264 and stu1265) |
Equation ID | M_pep_c + M_glc__D_e > M_g6p_c + M_pyr_c |
Equation Name | Phosphoenolpyruvate + D-Glucose > D-Glucose 6-phosphate + Pyruvate |
Substrates | |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
M_glc__D_e | D-Glucose |
charge: 0 | C6H12O6 |
Products | |
M_g6p_c | D-Glucose 6-phosphate |
charge: -2 | C6H11O9P |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/GLCpts |
is | http://identifiers.org/metanetx.reaction/MNXR100237 |
Organism | bigg2-eco41 |
R_GLNabc (irreversble) | L-glutamine transport via ABC system |
Association | ((b0810 and b0811 and b0809)) |
Association new | (stu1492 and stu0606) |
Equation ID | M_gln__L_e + M_h2o_c + M_atp_c > M_pi_c + M_gln__L_c + M_adp_c + M_h_c |
Equation Name | L-Glutamine + H2O H2O + ATP C10H12N5O13P3 > Phosphate + L-Glutamine + ADP C10H12N5O10P2 + H+ |
Substrates | |
M_gln__L_e | L-Glutamine |
charge: 0 | C5H10N2O3 |
M_h2o_c | H2O H2O |
charge: 0 | H2O |
M_atp_c | ATP C10H12N5O13P3 |
charge: -4 | C10H12N5O13P3 |
Products | |
M_pi_c | Phosphate |
charge: -2 | HO4P |
M_gln__L_c | L-Glutamine |
charge: 0 | C5H10N2O3 |
M_adp_c | ADP C10H12N5O10P2 |
charge: -3 | C10H12N5O10P2 |
M_h_c | H+ |
charge: 1 | H |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/GLNabc |
is | http://identifiers.org/biocyc/META:ABC-12-RXN |
is | http://identifiers.org/ec-code/3.6.3.21 |
is | http://identifiers.org/metanetx.reaction/MNXR100258 |
is | http://identifiers.org/rhea/29895#1 |
is | http://identifiers.org/rhea/29896#1 |
is | http://identifiers.org/rhea/29897#1 |
is | http://identifiers.org/rhea/29898#1 |
Organism | bigg2-eco41 |
R_GLU5K (irreversble) | Glutamate 5-kinase |
Association | b0242 |
Association new | (stu1711) |
Equation ID | M_glu__L_c + M_atp_c > M_adp_c + M_glu5p_c |
Equation Name | L-Glutamate + ATP C10H12N5O13P3 > ADP C10H12N5O10P2 + L-Glutamate 5-phosphate |
Substrates | |
M_glu__L_c | L-Glutamate |
charge: -1 | C5H8NO4 |
M_atp_c | ATP C10H12N5O13P3 |
charge: -4 | C10H12N5O13P3 |
Products | |
M_adp_c | ADP C10H12N5O10P2 |
charge: -3 | C10H12N5O10P2 |
M_glu5p_c | L-Glutamate 5-phosphate |
charge: -2 | C5H8NO7P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/GLU5K |
is | http://identifiers.org/biocyc/META:GLUTKIN-RXN |
is | http://identifiers.org/ec-code/2.7.2.11 |
is | http://identifiers.org/kegg.reaction/R00239 |
is | http://identifiers.org/metanetx.reaction/MNXR100277 |
is | http://identifiers.org/rhea/14877 |
is | http://identifiers.org/rhea/14878 |
is | http://identifiers.org/rhea/14879 |
is | http://identifiers.org/rhea/14880 |
Organism | bigg2-eco41 |
R_GLUabc (irreversble) | L-glutamate transport via ABC system |
Association | ((b0654 and b0655 and b0652 and b0653)) |
Association new | (stu1164) |
Equation ID | M_glu__L_e + M_h2o_c + M_atp_c > M_glu__L_c + M_pi_c + M_adp_c + M_h_c |
Equation Name | L-Glutamate + H2O H2O + ATP C10H12N5O13P3 > L-Glutamate + Phosphate + ADP C10H12N5O10P2 + H+ |
Substrates | |
M_glu__L_e | L-Glutamate |
charge: -1 | C5H8NO4 |
M_h2o_c | H2O H2O |
charge: 0 | H2O |
M_atp_c | ATP C10H12N5O13P3 |
charge: -4 | C10H12N5O13P3 |
Products | |
M_glu__L_c | L-Glutamate |
charge: -1 | C5H8NO4 |
M_pi_c | Phosphate |
charge: -2 | HO4P |
M_adp_c | ADP C10H12N5O10P2 |
charge: -3 | C10H12N5O10P2 |
M_h_c | H+ |
charge: 1 | H |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/GLUabc |
is | http://identifiers.org/biocyc/META:ABC-13-RXN |
is | http://identifiers.org/ec-code/3.6.3.21 |
is | http://identifiers.org/metanetx.reaction/MNXR100299 |
is | http://identifiers.org/rhea/29035#1 |
is | http://identifiers.org/rhea/29036#1 |
is | http://identifiers.org/rhea/29037#1 |
is | http://identifiers.org/rhea/29038#1 |
Organism | bigg2-eco41 |
R_ICDHyr (reversible) | Isocitrate dehydrogenase (NADP) |
Association | b1136 |
Association new | (stu1266) |
Equation ID | M_icit_c + M_nadp_c = M_nadph_c + M_co2_c + M_akg_c |
Equation Name | Isocitrate + Nicotinamide adenine dinucleotide phosphate = Nicotinamide adenine dinucleotide phosphate - reduced + CO2 CO2 + 2-Oxoglutarate |
Substrates | |
M_icit_c | Isocitrate |
charge: -3 | C6H5O7 |
M_nadp_c | Nicotinamide adenine dinucleotide phosphate |
charge: -3 | C21H25N7O17P3 |
Products | |
M_nadph_c | Nicotinamide adenine dinucleotide phosphate - reduced |
charge: -4 | C21H26N7O17P3 |
M_co2_c | CO2 CO2 |
charge: 0 | CO2 |
M_akg_c | 2-Oxoglutarate |
charge: -2 | C5H4O5 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/ICDHyr |
is | http://identifiers.org/ec-code/1.1.1.42 |
is | http://identifiers.org/kegg.reaction/R00267 |
is | http://identifiers.org/metanetx.reaction/MNXR100781 |
is | http://identifiers.org/rhea/19629 |
is | http://identifiers.org/rhea/19630 |
is | http://identifiers.org/rhea/19631 |
is | http://identifiers.org/rhea/19632 |
Organism | bigg2-eco41 |
R_ILETA (reversible) | Isoleucine transaminase |
Association | b3770 |
Association new | (stu0590) |
Equation ID | M_akg_c + M_ile__L_c = M_glu__L_c + M_3mop_c |
Equation Name | 2-Oxoglutarate + L-Isoleucine = L-Glutamate + (S)-3-Methyl-2-oxopentanoate |
Substrates | |
M_akg_c | 2-Oxoglutarate |
charge: -2 | C5H4O5 |
M_ile__L_c | L-Isoleucine |
charge: 0 | C6H13NO2 |
Products | |
M_glu__L_c | L-Glutamate |
charge: -1 | C5H8NO4 |
M_3mop_c | (S)-3-Methyl-2-oxopentanoate |
charge: -1 | C6H9O3 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/ILETA |
is | http://identifiers.org/biocyc/META:BRANCHED-CHAINAMINOTRANSFERILEU-RXN |
is | http://identifiers.org/ec-code/2.6.1.42 |
is | http://identifiers.org/kegg.reaction/R02199 |
is | http://identifiers.org/metanetx.reaction/MNXR96228 |
is | http://identifiers.org/rhea/24801 |
is | http://identifiers.org/rhea/24802 |
is | http://identifiers.org/rhea/24803 |
is | http://identifiers.org/rhea/24804 |
Organism | bigg2-eco41 |
R_Kt2r (reversible) | Potassium reversible transport via proton symport |
Association | ((b1363 or b3849)) |
Association new | (stu0264) |
Equation ID | M_k_e + M_h_e = M_h_c + M_k_c |
Equation Name | Potassium + H+ = H+ + Potassium |
Substrates | |
M_k_e | Potassium |
charge: 1 | K |
M_h_e | H+ |
charge: 1 | H |
Products | |
M_h_c | H+ |
charge: 1 | H |
M_k_c | Potassium |
charge: 1 | K |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/Kt2r |
is | http://identifiers.org/biocyc/META:TRANS-RXN-3 |
is | http://identifiers.org/metanetx.reaction/MNXR100951 |
is | http://identifiers.org/rhea/28490 |
is | http://identifiers.org/rhea/28491 |
is | http://identifiers.org/rhea/28492 |
is | http://identifiers.org/rhea/28493 |
Organism | bigg2-eco41 |
R_LCADi_copy1 (reversible) | |
Association | ((b0356 or b1415 or b1300 or b3588)) |
Association new | (stu0936) |
Equation ID | M_h2o_c + M_lald__L_c + M_nad_c = M_lac__L_c + (2.0) M_h_c + M_nadh_c |
Equation Name | H2O H2O + L-Lactaldehyde + Nicotinamide adenine dinucleotide = L-Lactate + (2.0) H+ + Nicotinamide adenine dinucleotide - reduced |
Substrates | |
M_h2o_c | H2O H2O |
charge: 0 | H2O |
M_lald__L_c | L-Lactaldehyde |
charge: 0 | C3H6O2 |
M_nad_c | Nicotinamide adenine dinucleotide |
charge: -1 | C21H26N7O14P2 |
Products | |
M_lac__L_c | L-Lactate |
charge: -1 | C3H5O3 |
M_h_c | H+ |
charge: 1 | H |
M_nadh_c | Nicotinamide adenine dinucleotide - reduced |
charge: -2 | C21H27N7O14P2 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/biocyc/META:LACTALDDEHYDROG-RXN |
is | http://identifiers.org/ec-code/1.2.1.22 |
is | http://identifiers.org/kegg.reaction/R01446 |
is | http://identifiers.org/metanetx.reaction/MNXR101018 |
is | http://identifiers.org/rhea/14277 |
is | http://identifiers.org/rhea/14278 |
is | http://identifiers.org/rhea/14279 |
is | http://identifiers.org/rhea/14280 |
Organism | bigg2-eco41 |
R_LEUTAi (irreversble) | Leucine transaminase (irreversible) |
Association | ((b3770 or b4054)) |
Association new | (stu0590) |
Equation ID | M_glu__L_c + M_4mop_c > M_leu__L_c + M_akg_c |
Equation Name | L-Glutamate + 4-Methyl-2-oxopentanoate > L-Leucine + 2-Oxoglutarate |
Substrates | |
M_glu__L_c | L-Glutamate |
charge: -1 | C5H8NO4 |
M_4mop_c | 4-Methyl-2-oxopentanoate |
charge: -1 | C6H9O3 |
Products | |
M_leu__L_c | L-Leucine |
charge: 0 | C6H13NO2 |
M_akg_c | 2-Oxoglutarate |
charge: -2 | C5H4O5 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/LEUTAi |
is | http://identifiers.org/biocyc/META:BRANCHED-CHAINAMINOTRANSFERLEU-RXN |
is | http://identifiers.org/ec-code/2.6.1.42 |
is | http://identifiers.org/ec-code/2.6.1.6 |
is | http://identifiers.org/ec-code/2.6.1.67 |
is | http://identifiers.org/kegg.reaction/R01090 |
is | http://identifiers.org/metanetx.reaction/MNXR96229 |
is | http://identifiers.org/rhea/18321 |
is | http://identifiers.org/rhea/18322 |
is | http://identifiers.org/rhea/18323 |
is | http://identifiers.org/rhea/18324 |
Organism | bigg2-eco41 |
R_MALTpts (irreversble) | Maltose transport via PEP:Pyr PTS |
Association | ((b2416 and b2417 and b2415 and b1621 and b4036)) |
Association new | (stu1264 and stu1265) |
Equation ID | M_malt_e + M_pep_c > M_malt6p_c + M_pyr_c |
Equation Name | Maltose C12H22O11 + Phosphoenolpyruvate > Maltose 6'-phosphate + Pyruvate |
Substrates | |
M_malt_e | Maltose C12H22O11 |
charge: 0 | C12H22O11 |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
Products | |
M_malt6p_c | Maltose 6'-phosphate |
charge: -2 | C12H21O14P |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/MALTpts |
is | http://identifiers.org/metanetx.reaction/MNXR101363 |
Organism | bigg2-eco41 |
R_MANpts (irreversble) | D-mannose transport via PEP:Pyr PTS |
Association | ((b2416 and b1817 and b1819 and b2415 and b1818)) |
Association new | (stu1264 and stu1265) |
Equation ID | M_pep_c + M_man_e > M_pyr_c + M_man6p_c |
Equation Name | Phosphoenolpyruvate + D-Mannose > Pyruvate + D-Mannose 6-phosphate |
Substrates | |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
M_man_e | D-Mannose |
charge: 0 | C6H12O6 |
Products | |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
M_man6p_c | D-Mannose 6-phosphate |
charge: -2 | C6H11O9P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/MANpts |
is | http://identifiers.org/metanetx.reaction/MNXR101401 |
Organism | bigg2-eco41 |
R_MCITS (irreversble) | 2-methylcitrate synthase |
Association | b0333 |
Association new | (stu1267) |
Equation ID | M_ppcoa_c + M_h2o_c + M_oaa_c > M_2mcit_c + M_h_c + M_coa_c |
Equation Name | Propanoyl-CoA + H2O H2O + Oxaloacetate > 2-Methylcitrate + H+ + Coenzyme A |
Substrates | |
M_ppcoa_c | Propanoyl-CoA |
charge: -4 | C24H36N7O17P3S |
M_h2o_c | H2O H2O |
charge: 0 | H2O |
M_oaa_c | Oxaloacetate |
charge: -2 | C4H2O5 |
Products | |
M_2mcit_c | 2-Methylcitrate |
charge: -3 | C7H7O7 |
M_h_c | H+ |
charge: 1 | H |
M_coa_c | Coenzyme A |
charge: -4 | C21H32N7O16P3S |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/MCITS |
is | http://identifiers.org/biocyc/META:2-METHYLCITRATE-SYNTHASE-RXN |
is | http://identifiers.org/ec-code/2.3.3.5 |
is | http://identifiers.org/kegg.reaction/R00931 |
is | http://identifiers.org/metanetx.reaction/MNXR101417 |
is | http://identifiers.org/rhea/23780 |
is | http://identifiers.org/rhea/23781 |
is | http://identifiers.org/rhea/23782 |
is | http://identifiers.org/rhea/23783 |
Organism | bigg2-eco41 |
R_METS_1 (irreversble) | Methionine synthase |
Association | ((b3829 or b4019)) |
Association new | (stu0785) |
Equation ID | M_hcys__L_c + M_5mthf_c > M_met__L_c + M_thf_c |
Equation Name | L-Homocysteine + 5-Methyltetrahydrofolate > L-Methionine + 5,6,7,8-Tetrahydrofolate |
Substrates | |
M_hcys__L_c | L-Homocysteine |
charge: 0 | C4H9NO2S |
M_5mthf_c | 5-Methyltetrahydrofolate |
charge: -1 | C20H24N7O6 |
Products | |
M_met__L_c | L-Methionine |
charge: 0 | C5H11NO2S |
M_thf_c | 5,6,7,8-Tetrahydrofolate |
charge: -2 | C19H21N7O6 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/METS_1 |
is | http://identifiers.org/ec-code/2.1.1.13 |
is | http://identifiers.org/kegg.reaction/R00946 |
is | http://identifiers.org/metanetx.reaction/MNXR101481 |
is | http://identifiers.org/rhea/11172 |
is | http://identifiers.org/rhea/11173 |
is | http://identifiers.org/rhea/11174 |
is | http://identifiers.org/rhea/11175 |
Organism | bigg2-eco41 |
R_MICITDr (irreversble) | 2-methylisocitrate dehydratase |
Association | ((b1276 or b0118)) |
Association new | (stu1268) |
Equation ID | M_2mcacn_c + M_h2o_c > M_micit_c |
Equation Name | Cis-2-Methylaconitate + H2O H2O > Methylisocitrate |
Substrates | |
M_2mcacn_c | Cis-2-Methylaconitate |
charge: -3 | C7H5O6 |
M_h2o_c | H2O H2O |
charge: 0 | H2O |
Products | |
M_micit_c | Methylisocitrate |
charge: -3 | C7H7O7 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/MICITDr |
is | http://identifiers.org/biocyc/META:4.2.1.99-RXN |
is | http://identifiers.org/ec-code/4.2.1.99 |
is | http://identifiers.org/kegg.reaction/R04425 |
is | http://identifiers.org/metanetx.reaction/MNXR101580 |
is | http://identifiers.org/rhea/17941 |
is | http://identifiers.org/rhea/17942 |
is | http://identifiers.org/rhea/17943 |
is | http://identifiers.org/rhea/17944 |
Organism | bigg2-eco41 |
R_MNLpts (irreversble) | Mannitol transport via PEP:Pyr PTS |
Association | ((b2416 and b2415 and b3599)) |
Association new | (stu1264 and stu1265) |
Equation ID | M_pep_c + M_mnl_e > M_pyr_c + M_mnl1p_c |
Equation Name | Phosphoenolpyruvate + D-Mannitol > Pyruvate + D-Mannitol 1-phosphate |
Substrates | |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
M_mnl_e | D-Mannitol |
charge: 0 | C6H14O6 |
Products | |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
M_mnl1p_c | D-Mannitol 1-phosphate |
charge: -2 | C6H13O9P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/MNLpts |
is | http://identifiers.org/metanetx.reaction/MNXR101677 |
Organism | bigg2-eco41 |
R_OBTFL (irreversble) | 2-Oxobutanoate formate lyase |
Association | (((b0902 and b0903) or b3114)) |
Association new | (stu1640) |
Equation ID | M_2obut_c + M_coa_c > M_ppcoa_c + M_for_c |
Equation Name | 2-Oxobutanoate + Coenzyme A > Propanoyl-CoA + Formate |
Substrates | |
M_2obut_c | 2-Oxobutanoate |
charge: -1 | C4H5O3 |
M_coa_c | Coenzyme A |
charge: -4 | C21H32N7O16P3S |
Products | |
M_ppcoa_c | Propanoyl-CoA |
charge: -4 | C24H36N7O17P3S |
M_for_c | Formate |
charge: -1 | CH1O2 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/OBTFL |
is | http://identifiers.org/biocyc/META:KETOBUTFORMLY-RXN |
is | http://identifiers.org/ec-code/2.3.1.- |
is | http://identifiers.org/ec-code/2.3.1.54 |
is | http://identifiers.org/kegg.reaction/R06987 |
is | http://identifiers.org/metanetx.reaction/MNXR102135 |
is | http://identifiers.org/rhea/28054 |
is | http://identifiers.org/rhea/28055 |
is | http://identifiers.org/rhea/28056 |
is | http://identifiers.org/rhea/28057 |
Organism | bigg2-eco41 |
R_OCBT (reversible) | Ornithine carbamoyltransferase |
Association | ((b4254 or b0273)) |
Association new | (stu0603) |
Equation ID | M_cbp_c + M_orn_c = M_citr__L_c + M_h_c + M_pi_c |
Equation Name | Carbamoyl phosphate + Ornithine = L-Citrulline + H+ + Phosphate |
Substrates | |
M_cbp_c | Carbamoyl phosphate |
charge: -2 | CH2NO5P |
M_orn_c | Ornithine |
charge: 1 | C5H13N2O2 |
Products | |
M_citr__L_c | L-Citrulline |
charge: 0 | C6H13N3O3 |
M_h_c | H+ |
charge: 1 | H |
M_pi_c | Phosphate |
charge: -2 | HO4P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/OCBT |
is | http://identifiers.org/biocyc/META:ORNCARBAMTRANSFER-RXN |
is | http://identifiers.org/biocyc/META:RXN-13482 |
is | http://identifiers.org/ec-code/2.1.3.3 |
is | http://identifiers.org/kegg.reaction/R01398 |
is | http://identifiers.org/metanetx.reaction/MNXR102137 |
is | http://identifiers.org/rhea/19513 |
is | http://identifiers.org/rhea/19514 |
is | http://identifiers.org/rhea/19515 |
is | http://identifiers.org/rhea/19516 |
Organism | bigg2-eco41 |
R_PFL (irreversble) | Pyruvate formate lyase |
Association | ((b3114 or (b3951 and b3952) or (b0902 and b0903))) |
Association new | (stu1640) |
Equation ID | M_pyr_c + M_coa_c > M_accoa_c + M_for_c |
Equation Name | Pyruvate + Coenzyme A > Acetyl-CoA + Formate |
Substrates | |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
M_coa_c | Coenzyme A |
charge: -4 | C21H32N7O16P3S |
Products | |
M_accoa_c | Acetyl-CoA |
charge: -4 | C23H34N7O17P3S |
M_for_c | Formate |
charge: -1 | CH1O2 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/PFL |
is | http://identifiers.org/biocyc/META:PYRUVFORMLY-RXN |
is | http://identifiers.org/ec-code/2.3.1.54 |
is | http://identifiers.org/kegg.reaction/R00212 |
is | http://identifiers.org/metanetx.reaction/MNXR102514 |
is | http://identifiers.org/rhea/11844 |
is | http://identifiers.org/rhea/11845 |
is | http://identifiers.org/rhea/11846 |
is | http://identifiers.org/rhea/11847 |
Organism | bigg2-eco41 |
R_PGM (reversible) | Phosphoglycerate mutase |
Association | ((b4395 or b3612 or b0755)) |
Association new | (stu0697) |
Equation ID | M_2pg_c = M_3pg_c |
Equation Name | D-Glycerate 2-phosphate = 3-Phospho-D-glycerate |
Substrates | |
M_2pg_c | D-Glycerate 2-phosphate |
charge: -3 | C3H4O7P |
Products | |
M_3pg_c | 3-Phospho-D-glycerate |
charge: -3 | C3H4O7P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/PGM |
is | http://identifiers.org/biocyc/META:3PGAREARR-RXN |
is | http://identifiers.org/biocyc/META:RXN-15513 |
is | http://identifiers.org/ec-code/5.4.2.1 |
is | http://identifiers.org/ec-code/5.4.2.11 |
is | http://identifiers.org/ec-code/5.4.2.12 |
is | http://identifiers.org/kegg.reaction/R01518 |
is | http://identifiers.org/metanetx.reaction/MNXR102547 |
is | http://identifiers.org/rhea/15901 |
is | http://identifiers.org/rhea/15902 |
is | http://identifiers.org/rhea/15903 |
is | http://identifiers.org/rhea/15904 |
Organism | bigg2-eco41 |
R_PHETA1 (reversible) | Phenylalanine transaminase |
Association | ((b0928 or b3770 or b4054)) |
Association new | (stu0590) |
Equation ID | M_akg_c + M_phe__L_c = M_glu__L_c + M_phpyr_c |
Equation Name | 2-Oxoglutarate + L-Phenylalanine = L-Glutamate + Phenylpyruvate |
Substrates | |
M_akg_c | 2-Oxoglutarate |
charge: -2 | C5H4O5 |
M_phe__L_c | L-Phenylalanine |
charge: 0 | C9H11NO2 |
Products | |
M_glu__L_c | L-Glutamate |
charge: -1 | C5H8NO4 |
M_phpyr_c | Phenylpyruvate |
charge: -1 | C9H7O3 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/PHETA1 |
is | http://identifiers.org/biocyc/META:PHEAMINOTRANS-RXN |
is | http://identifiers.org/biocyc/META:RXN-10814 |
is | http://identifiers.org/ec-code/2.6.1.1 |
is | http://identifiers.org/ec-code/2.6.1.42 |
is | http://identifiers.org/ec-code/2.6.1.5 |
is | http://identifiers.org/ec-code/2.6.1.57 |
is | http://identifiers.org/ec-code/2.6.1.58 |
is | http://identifiers.org/ec-code/2.6.1.9 |
is | http://identifiers.org/kegg.reaction/R00694 |
is | http://identifiers.org/metanetx.reaction/MNXR102631 |
Organism | bigg2-eco41 |
R_PRPPS (reversible) | Phosphoribosylpyrophosphate synthetase |
Association | b1207 |
Association new | (stu1460) |
Equation ID | M_r5p_c + M_atp_c = M_prpp_c + M_h_c + M_amp_c |
Equation Name | Alpha-D-Ribose 5-phosphate + ATP C10H12N5O13P3 = 5-Phospho-alpha-D-ribose 1-diphosphate + H+ + AMP C10H12N5O7P |
Substrates | |
M_r5p_c | Alpha-D-Ribose 5-phosphate |
charge: -2 | C5H9O8P |
M_atp_c | ATP C10H12N5O13P3 |
charge: -4 | C10H12N5O13P3 |
Products | |
M_prpp_c | 5-Phospho-alpha-D-ribose 1-diphosphate |
charge: -5 | C5H8O14P3 |
M_h_c | H+ |
charge: 1 | H |
M_amp_c | AMP C10H12N5O7P |
charge: -2 | C10H12N5O7P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/PRPPS |
is | http://identifiers.org/ec-code/2.7.6.1 |
is | http://identifiers.org/metanetx.reaction/MNXR103215 |
Organism | bigg2-eco41 |
R_PTPATi (irreversble) | Pantetheine-phosphate adenylyltransferase |
Association | b3634 |
Association new | (stu1648) |
Equation ID | M_h_c + M_atp_c + M_pan4p_c > M_ppi_c + M_dpcoa_c |
Equation Name | H+ + ATP C10H12N5O13P3 + Pantetheine 4'-phosphate > Diphosphate + Dephospho-CoA |
Substrates | |
M_h_c | H+ |
charge: 1 | H |
M_atp_c | ATP C10H12N5O13P3 |
charge: -4 | C10H12N5O13P3 |
M_pan4p_c | Pantetheine 4'-phosphate |
charge: -2 | C11H21N2O7PS |
Products | |
M_ppi_c | Diphosphate |
charge: -3 | HO7P2 |
M_dpcoa_c | Dephospho-CoA |
charge: -2 | C21H33N7O13P2S |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/PTPATi |
is | http://identifiers.org/biocyc/META:PANTEPADENYLYLTRAN-RXN |
is | http://identifiers.org/ec-code/2.7.7.3 |
is | http://identifiers.org/kegg.reaction/R03035 |
is | http://identifiers.org/metanetx.reaction/MNXR95892 |
is | http://identifiers.org/rhea/19801 |
is | http://identifiers.org/rhea/19802 |
is | http://identifiers.org/rhea/19803 |
is | http://identifiers.org/rhea/19804 |
Organism | bigg2-eco41 |
R_SBTpts (irreversble) | D-sorbitol transport via PEP:Pyr PTS |
Association | ((b2416 and b2703 and b2415 and b2704 and b2702)) |
Association new | (stu1264 and stu1265) |
Equation ID | M_pep_c + M_sbt__D_e > M_pyr_c + M_sbt6p_c |
Equation Name | Phosphoenolpyruvate + D-Sorbitol > Pyruvate + D-Sorbitol 6-phosphate |
Substrates | |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
M_sbt__D_e | D-Sorbitol |
charge: 0 | C6H14O6 |
Products | |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
M_sbt6p_c | D-Sorbitol 6-phosphate |
charge: -2 | C6H13O9P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/SBTpts |
is | http://identifiers.org/metanetx.reaction/MNXR104290 |
Organism | bigg2-eco41 |
R_SERAT (reversible) | Serine O-acetyltransferase |
Association | b3607 |
Association new | (stu0848) |
Equation ID | M_accoa_c + M_ser__L_c = M_acser_c + M_coa_c |
Equation Name | Acetyl-CoA + L-Serine = O-Acetyl-L-serine + Coenzyme A |
Substrates | |
M_accoa_c | Acetyl-CoA |
charge: -4 | C23H34N7O17P3S |
M_ser__L_c | L-Serine |
charge: 0 | C3H7NO3 |
Products | |
M_acser_c | O-Acetyl-L-serine |
charge: 0 | C5H9NO4 |
M_coa_c | Coenzyme A |
charge: -4 | C21H32N7O16P3S |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/SERAT |
is | http://identifiers.org/biocyc/META:SERINE-O-ACETTRAN-RXN |
is | http://identifiers.org/ec-code/2.3.1.30 |
is | http://identifiers.org/kegg.reaction/R00586 |
is | http://identifiers.org/metanetx.reaction/MNXR104275 |
is | http://identifiers.org/rhea/24560 |
is | http://identifiers.org/rhea/24561 |
is | http://identifiers.org/rhea/24562 |
is | http://identifiers.org/rhea/24563 |
Organism | bigg2-eco41 |
R_SHSL1 (irreversble) | O-succinylhomoserine lyase (L-cysteine) |
Association | b3939 |
Association new | (stu0847) |
Equation ID | M_suchms_c + M_cys__L_c > M_cyst__L_c + M_succ_c + M_h_c |
Equation Name | O-Succinyl-L-homoserine + L-Cysteine > L-Cystathionine + Succinate + H+ |
Substrates | |
M_suchms_c | O-Succinyl-L-homoserine |
charge: -1 | C8H12NO6 |
M_cys__L_c | L-Cysteine |
charge: 0 | C3H7NO2S |
Products | |
M_cyst__L_c | L-Cystathionine |
charge: 0 | C7H14N2O4S |
M_succ_c | Succinate |
charge: -2 | C4H4O4 |
M_h_c | H+ |
charge: 1 | H |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/SHSL1 |
is | http://identifiers.org/biocyc/META:O-SUCCHOMOSERLYASE-RXN |
is | http://identifiers.org/ec-code/2.5.1.48 |
is | http://identifiers.org/kegg.reaction/R03260 |
is | http://identifiers.org/metanetx.reaction/MNXR104380 |
is | http://identifiers.org/rhea/20397 |
is | http://identifiers.org/rhea/20398 |
is | http://identifiers.org/rhea/20399 |
is | http://identifiers.org/rhea/20400 |
Organism | bigg2-eco41 |
R_SPODM (irreversble) | Superoxide dismutase |
Association | ((b3908 or b1646 or b1656)) |
Association new | (stu0720) |
Equation ID | (-2.0) M_o2s_c + (-2.0) M_h_c > M_o2_c + M_h2o2_c |
Equation Name | (-2.0) Superoxide anion + (-2.0) H+ > O2 O2 + Hydrogen peroxide |
Substrates | |
M_o2s_c | Superoxide anion |
charge: -1 | O2 |
M_h_c | H+ |
charge: 1 | H |
Products | |
M_o2_c | O2 O2 |
charge: 0 | O2 |
M_h2o2_c | Hydrogen peroxide |
charge: 0 | H2O2 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/SPODM |
is | http://identifiers.org/biocyc/META:SUPEROX-DISMUT-RXN |
is | http://identifiers.org/ec-code/1.15.1.1 |
is | http://identifiers.org/kegg.reaction/R00275 |
is | http://identifiers.org/metanetx.reaction/MNXR104498 |
is | http://identifiers.org/rhea/20696 |
is | http://identifiers.org/rhea/20697 |
is | http://identifiers.org/rhea/20698 |
is | http://identifiers.org/rhea/20699 |
Organism | bigg2-eco41 |
R_SUCpts (irreversble) | Sucrose transport via PEP:Pyr PTS |
Association | ((b2416 and b2417 and b2415 and b2429)) |
Association new | (stu1264 and stu1265) |
Equation ID | M_pep_c + M_sucr_e > M_pyr_c + M_suc6p_c |
Equation Name | Phosphoenolpyruvate + Sucrose C12H22O11 > Pyruvate + Sucrose 6-phosphate |
Substrates | |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
M_sucr_e | Sucrose C12H22O11 |
charge: 0 | C12H22O11 |
Products | |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
M_suc6p_c | Sucrose 6-phosphate |
charge: -2 | C12H21O14P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/SUCpts |
is | http://identifiers.org/metanetx.reaction/MNXR104643 |
Organism | bigg2-eco41 |
R_THZPSN (irreversble) | Thiazole phosphate synthesis |
Association | ((b3990 and b3991 and b3992 and b2530 and b4407 and b0423)) |
Association new | (stu1461) |
Equation ID | M_tyr__L_c + M_dxyl5p_c + M_cys__L_c + M_atp_c > M_co2_c + M_4mpetz_c + M_h_c + M_ala__L_c + M_4hba_c + M_ppi_c + M_h2o_c + M_amp_c |
Equation Name | L-Tyrosine + 1-deoxy-D-xylulose 5-phosphate + L-Cysteine + ATP C10H12N5O13P3 > CO2 CO2 + 4-Methyl-5-(2-phosphoethyl)-thiazole + H+ + L-Alanine + 4-Hydroxy-benzyl alcohol + Diphosphate + H2O H2O + AMP C10H12N5O7P |
Substrates | |
M_tyr__L_c | L-Tyrosine |
charge: 0 | C9H11NO3 |
M_dxyl5p_c | 1-deoxy-D-xylulose 5-phosphate |
charge: -2 | C5H9O7P |
M_cys__L_c | L-Cysteine |
charge: 0 | C3H7NO2S |
M_atp_c | ATP C10H12N5O13P3 |
charge: -4 | C10H12N5O13P3 |
Products | |
M_co2_c | CO2 CO2 |
charge: 0 | CO2 |
M_4mpetz_c | 4-Methyl-5-(2-phosphoethyl)-thiazole |
charge: -2 | C6H8NO4PS |
M_h_c | H+ |
charge: 1 | H |
M_ala__L_c | L-Alanine |
charge: 0 | C3H7NO2 |
M_4hba_c | 4-Hydroxy-benzyl alcohol |
charge: 0 | C7H8O2 |
M_ppi_c | Diphosphate |
charge: -3 | HO7P2 |
M_h2o_c | H2O H2O |
charge: 0 | H2O |
M_amp_c | AMP C10H12N5O7P |
charge: -2 | C10H12N5O7P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/THZPSN |
is | http://identifiers.org/metanetx.reaction/MNXR104858 |
Organism | bigg2-eco41 |
R_TREpts (irreversble) | Trehalose transport via PEP:Pyr PTS |
Association | ((b2416 and b2417 and b2415 and b4240)) |
Association new | (stu1264 and stu1265) |
Equation ID | M_pep_c + M_tre_e > M_pyr_c + M_tre6p_c |
Equation Name | Phosphoenolpyruvate + Trehalose > Pyruvate + Alpha,alpha'-Trehalose 6-phosphate |
Substrates | |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
M_tre_e | Trehalose |
charge: 0 | C12H22O11 |
Products | |
M_pyr_c | Pyruvate |
charge: -1 | C3H3O3 |
M_tre6p_c | Alpha,alpha'-Trehalose 6-phosphate |
charge: -2 | C12H21O14P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/TREpts |
is | http://identifiers.org/ec-code/2.7.1.69 |
is | http://identifiers.org/metanetx.reaction/MNXR104931 |
Organism | bigg2-eco41 |
R_TRPS1 (irreversble) | Tryptophan synthase (indoleglycerol phosphate) |
Association | ((b1260 and b1261)) |
Association new | (stu1588) |
Equation ID | M_ser__L_c + M_3ig3p_c > M_g3p_c + M_trp__L_c + M_h2o_c |
Equation Name | L-Serine + C'-(3-Indolyl)-glycerol 3-phosphate > Glyceraldehyde 3-phosphate + L-Tryptophan + H2O H2O |
Substrates | |
M_ser__L_c | L-Serine |
charge: 0 | C3H7NO3 |
M_3ig3p_c | C'-(3-Indolyl)-glycerol 3-phosphate |
charge: -2 | C11H12NO6P |
Products | |
M_g3p_c | Glyceraldehyde 3-phosphate |
charge: -2 | C3H5O6P |
M_trp__L_c | L-Tryptophan |
charge: 0 | C11H12N2O2 |
M_h2o_c | H2O H2O |
charge: 0 | H2O |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/TRPS1 |
is | http://identifiers.org/biocyc/META:TRYPSYN-RXN |
is | http://identifiers.org/ec-code/4.2.1.20 |
is | http://identifiers.org/kegg.reaction/R02722 |
is | http://identifiers.org/metanetx.reaction/MNXR104343 |
is | http://identifiers.org/rhea/10532 |
is | http://identifiers.org/rhea/10533 |
is | http://identifiers.org/rhea/10534 |
is | http://identifiers.org/rhea/10535 |
Organism | bigg2-eco41 |
R_TRPS2 (irreversble) | Tryptophan synthase (indole) |
Association | ((b1260 and b1261)) |
Association new | (stu1588) |
Equation ID | M_ser__L_c + M_indole_c > M_h2o_c + M_trp__L_c |
Equation Name | L-Serine + Indole > H2O H2O + L-Tryptophan |
Substrates | |
M_ser__L_c | L-Serine |
charge: 0 | C3H7NO3 |
M_indole_c | Indole |
charge: 0 | C8H7N |
Products | |
M_h2o_c | H2O H2O |
charge: 0 | H2O |
M_trp__L_c | L-Tryptophan |
charge: 0 | C11H12N2O2 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/TRPS2 |
is | http://identifiers.org/biocyc/META:RXN0-2382 |
is | http://identifiers.org/ec-code/4.2.1.122 |
is | http://identifiers.org/ec-code/4.2.1.20 |
is | http://identifiers.org/kegg.reaction/R00674 |
is | http://identifiers.org/metanetx.reaction/MNXR104946 |
is | http://identifiers.org/rhea/26434 |
is | http://identifiers.org/rhea/26435 |
is | http://identifiers.org/rhea/26436 |
is | http://identifiers.org/rhea/26437 |
Organism | bigg2-eco41 |
R_TRPS3 (irreversble) | Tryptophan synthase (indoleglycerol phosphate) |
Association | ((b1260 and b1261)) |
Association new | (stu1588) |
Equation ID | M_3ig3p_c > M_g3p_c + M_indole_c |
Equation Name | C'-(3-Indolyl)-glycerol 3-phosphate > Glyceraldehyde 3-phosphate + Indole |
Substrates | |
M_3ig3p_c | C'-(3-Indolyl)-glycerol 3-phosphate |
charge: -2 | C11H12NO6P |
Products | |
M_g3p_c | Glyceraldehyde 3-phosphate |
charge: -2 | C3H5O6P |
M_indole_c | Indole |
charge: 0 | C8H7N |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/TRPS3 |
is | http://identifiers.org/biocyc/META:RXN0-2381 |
is | http://identifiers.org/ec-code/4.1.2.8 |
is | http://identifiers.org/ec-code/4.2.1.20 |
is | http://identifiers.org/kegg.reaction/R02340 |
is | http://identifiers.org/metanetx.reaction/MNXR99889 |
is | http://identifiers.org/rhea/14081 |
is | http://identifiers.org/rhea/14082 |
is | http://identifiers.org/rhea/14083 |
is | http://identifiers.org/rhea/14084 |
Organism | bigg2-eco41 |
R_UAGCVT (irreversble) | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
Association | b3189 |
Association new | (stu1167) |
Equation ID | M_pep_c + M_uacgam_c > M_pi_c + M_uaccg_c |
Equation Name | Phosphoenolpyruvate + UDP-N-acetyl-D-glucosamine > Phosphate + UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine |
Substrates | |
M_pep_c | Phosphoenolpyruvate |
charge: -3 | C3H2O6P |
M_uacgam_c | UDP-N-acetyl-D-glucosamine |
charge: -2 | C17H25N3O17P2 |
Products | |
M_pi_c | Phosphate |
charge: -2 | HO4P |
M_uaccg_c | UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine |
charge: -3 | C20H26N3O19P2 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/UAGCVT |
is | http://identifiers.org/biocyc/META:UDPNACETYLGLUCOSAMENOLPYRTRANS-RXN |
is | http://identifiers.org/ec-code/2.5.1.7 |
is | http://identifiers.org/kegg.reaction/R00660 |
is | http://identifiers.org/metanetx.reaction/MNXR105032 |
is | http://identifiers.org/rhea/18681 |
is | http://identifiers.org/rhea/18682 |
is | http://identifiers.org/rhea/18683 |
is | http://identifiers.org/rhea/18684 |
Organism | bigg2-eco41 |
R_UDPG4E (reversible) | UDPglucose 4-epimerase |
Association | b0759 |
Association new | (stu1169) |
Equation ID | M_udpg_c = M_udpgal_c |
Equation Name | UDPglucose = UDPgalactose |
Substrates | |
M_udpg_c | UDPglucose |
charge: -2 | C15H22N2O17P2 |
Products | |
M_udpgal_c | UDPgalactose |
charge: -2 | C15H22N2O17P2 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/UDPG4E |
is | http://identifiers.org/biocyc/META:UDPGLUCEPIM-RXN |
is | http://identifiers.org/ec-code/5.1.3.2 |
is | http://identifiers.org/kegg.reaction/R00291 |
is | http://identifiers.org/metanetx.reaction/MNXR105057 |
is | http://identifiers.org/rhea/22168 |
is | http://identifiers.org/rhea/22169 |
is | http://identifiers.org/rhea/22170 |
is | http://identifiers.org/rhea/22171 |
Organism | bigg2-eco41 |
R_UPPRT (irreversble) | Uracil phosphoribosyltransferase |
Association | b2498 |
Association new | (stu0355) |
Equation ID | M_prpp_c + M_ura_c > M_ppi_c + M_ump_c |
Equation Name | 5-Phospho-alpha-D-ribose 1-diphosphate + Uracil > Diphosphate + UMP C9H11N2O9P |
Substrates | |
M_prpp_c | 5-Phospho-alpha-D-ribose 1-diphosphate |
charge: -5 | C5H8O14P3 |
M_ura_c | Uracil |
charge: 0 | C4H4N2O2 |
Products | |
M_ppi_c | Diphosphate |
charge: -3 | HO7P2 |
M_ump_c | UMP C9H11N2O9P |
charge: -2 | C9H11N2O9P |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/UPPRT |
is | http://identifiers.org/biocyc/META:URACIL-PRIBOSYLTRANS-RXN |
is | http://identifiers.org/ec-code/2.4.2.9 |
is | http://identifiers.org/kegg.reaction/R00966 |
is | http://identifiers.org/metanetx.reaction/MNXR105142 |
is | http://identifiers.org/rhea/13017 |
is | http://identifiers.org/rhea/13018 |
is | http://identifiers.org/rhea/13019 |
is | http://identifiers.org/rhea/13020 |
Organism | bigg2-eco41 |
R_VALTA (reversible) | Valine transaminase |
Association | b3770 |
Association new | (stu0590) |
Equation ID | M_akg_c + M_val__L_c = M_glu__L_c + M_3mob_c |
Equation Name | 2-Oxoglutarate + L-Valine = L-Glutamate + 3-Methyl-2-oxobutanoate |
Substrates | |
M_akg_c | 2-Oxoglutarate |
charge: -2 | C5H4O5 |
M_val__L_c | L-Valine |
charge: 0 | C5H11NO2 |
Products | |
M_glu__L_c | L-Glutamate |
charge: -1 | C5H8NO4 |
M_3mob_c | 3-Methyl-2-oxobutanoate |
charge: -1 | C5H7O3 |
Annotations | |
RDF references (opens in browser) | |
is | http://identifiers.org/bigg.reaction/VALTA |
is | http://identifiers.org/biocyc/META:BRANCHED-CHAINAMINOTRANSFERVAL-RXN |
is | http://identifiers.org/ec-code/2.6.1.42 |
is | http://identifiers.org/ec-code/2.6.1.6 |
is | http://identifiers.org/kegg.reaction/R01214 |
is | http://identifiers.org/metanetx.reaction/MNXR96230 |
is | http://identifiers.org/rhea/24813 |
is | http://identifiers.org/rhea/24814 |
is | http://identifiers.org/rhea/24815 |
is | http://identifiers.org/rhea/24816 |
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