Arabidopsis QTL data on gravitropism

Data from a QTL experiment on gravitropism in Arabidopsis, with data on 162 recombinant inbred lines (Ler x Cvi). The outcome is the root tip angle (in degrees) at two-minute increments over eight hours.

data(arabidopsis)

Format

An object of class spec_tbl_df (inherits from tbl_df, tbl, data.frame) with 14890 rows and 289 columns.

Source

QTL Archive

References

Moore et al. (2013) Genetics 195:1077-1086 (PubMed)

Examples

data(arabidopsis)
core_methods(arabidopsis)
#> # A tibble: 59,560 x 6
#>    X            Mean Variance    CV name                                   value
#>    <chr>       <dbl>    <dbl> <dbl> <fct>                                  <dbl>
#>  1 OTU_100   0.368    0.707   1.92  Proportion of Sequence Reads               0
#>  2 OTU_100   0.368    0.707   1.92  Proportion of Sequence Reads and Repl…     0
#>  3 OTU_100   0.368    0.707   1.92  Hard Cut Off                               0
#>  4 OTU_100   0.368    0.707   1.92  Proportion of Sequence Replicates          0
#>  5 OTU_1000  0.00694  0.00692 0.997 Proportion of Sequence Reads               0
#>  6 OTU_1000  0.00694  0.00692 0.997 Proportion of Sequence Reads and Repl…     0
#>  7 OTU_1000  0.00694  0.00692 0.997 Hard Cut Off                               0
#>  8 OTU_1000  0.00694  0.00692 0.997 Proportion of Sequence Replicates          0
#>  9 OTU_10000 0.698    5.85    8.38  Proportion of Sequence Reads               0
#> 10 OTU_10000 0.698    5.85    8.38  Proportion of Sequence Reads and Repl…     0
#> # … with 59,550 more rows