Published August 28, 2020
| Version v1.0.1
Software
Open
danlwarren/ENMTools: ENMTools 1.0.1
- 1. Australian National University
- 2. The Australian National University
- 3. Temple University
- 4. University of Melbourne
Description
This is the first post-CRAN update to ENMTools, which fixes a few minor issues and adds some useful new features.
Enhancements- Added variable importance tests via interface with the vip package
- Added clamping for the predict functions, including plots of where clamping is happening
- Added clamping for model construction functions, with a TRUE/FALSE switch defaulting to TRUE
- Changed naming conventions for predict functions so that the suitability raster is in the $suitability slot, just as with modeling functions
- Added progress bars for a lot of tests
- Added "verbose" option for a lot of functions, defaulting to FALSE
- Added some code to fix a bug with recalibration. Basically CalibratR's call to parallel was tanking on Mac OS, and there's just a little code snippet that needed to be added to the call to make that work.
- Fixed interactive.plot generic and moved the function to its own file to make it easier to extend
- Temporarily suppressing some warnings coming out of leaflet that are being produced by the recent rgdal changes
- Fixed background sampling code to resample when necessary
- Changed enmtools.ranger demo code to actually use ranger instead of rf
- Fixed code for calculating p values for some of the hypothesis tests, the old code was getting wrong answers when there were repeated values
Files
danlwarren/ENMTools-v1.0.1.zip
Files
(11.2 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/danlwarren/ENMTools/tree/v1.0.1 (URL)