"ID","Terminal's name","Genus","Comment" "AF311056","Flavivirus_Tick-borne_encephalitis_virus_group_Deer_tick_virus_AF311056","Flavivirus","GenBank sequence (see GenBank.gb)" "AY632538","Flavivirus_Iguape_virus_AY632538","Flavivirus","GenBank sequence (see GenBank.gb)" "AY632542","Flavivirus_Rocio_virus_AY632542","Flavivirus","GenBank sequence (see GenBank.gb)" "AY898809","Flavivirus_Alfuy_virus_AY898809","Flavivirus","GenBank sequence (see GenBank.gb)" "DQ235144","Flavivirus_Seaborne_tick-borne_virus_group_Meaban_virus_DQ235144","Flavivirus","GenBank sequence (see GenBank.gb)" "DQ235145","Flavivirus_Gadgets_Gully_virus_DQ235145","Flavivirus","GenBank sequence (see GenBank.gb)" "DQ235146","Flavivirus_Kadam_virus_DQ235146","Flavivirus","GenBank sequence (see GenBank.gb)" "DQ235149","Flavivirus_Tick-borne_encephalitis_virus_group_Royal_Farm_virus_DQ235149","Flavivirus","GenBank sequence (see GenBank.gb)" "DQ235150","Flavivirus_Seaborne_tick-borne_virus_group_Saumarez_Reef_virus_DQ235150","Flavivirus","GenBank sequence (see GenBank.gb)" "DQ235151","Flavivirus_Tick-borne_encephalitis_virus_group_Turkish_sheep_encephalitis_virus_DQ235151","Flavivirus","GenBank sequence (see GenBank.gb)" "DQ235152","Flavivirus_Spanish_sheep_encephalitis_virus_DQ235152","Flavivirus","GenBank sequence (see GenBank.gb)" "DQ235153","Flavivirus_Greek_goat_encephalitis_virus_DQ235153","Flavivirus","GenBank sequence (see GenBank.gb)" "DQ859056","Flavivirus_Yellow_fever_virus_group_Banzi_virus_DQ859056","Flavivirus","GenBank sequence (see GenBank.gb)" "DQ859057","Flavivirus_Yellow_fever_virus_group_Bouboui_virus_DQ859057","Flavivirus","GenBank sequence (see GenBank.gb)" "DQ859062","Flavivirus_Rio_Bravo_virus_group_Saboya_virus_DQ859062","Flavivirus","GenBank sequence (see GenBank.gb)" "DQ859065","Flavivirus_Yellow_fever_virus_group_Uganda_S_virus_DQ859065","Flavivirus","GenBank sequence (see GenBank.gb)" "DQ859066","Flavivirus_Jugra_virus_DQ859066","Flavivirus","GenBank sequence (see GenBank.gb)" "DQ859067","Flavivirus_Rio_Bravo_virus_group_Potiskum_virus_DQ859067","Flavivirus","GenBank sequence (see GenBank.gb)" "EU078325","Flavivirus_Barkedji_virus_EU078325","Flavivirus","GenBank sequence (see GenBank.gb)" "EU082199","Flavivirus_Yaounde_virus_EU082199","Flavivirus","GenBank sequence (see GenBank.gb)" "EU082200","Flavivirus_Japanese_encephalitis_virus_group_Koutango_virus_EU082200","Flavivirus","GenBank sequence (see GenBank.gb)" "EU159426","Flavivirus_Nounane_virus_EU159426","Flavivirus","GenBank sequence (see GenBank.gb)" "HE574573","Flavivirus_Culex_theileri_flavivirus_RP-2011_HE574573","Flavivirus","GenBank sequence (see GenBank.gb)" "JF312912","Flavivirus_Ntaya_virus_group_Baiyangdian_virus_JF312912","Flavivirus","GenBank sequence (see GenBank.gb)" "JF416958","Flavivirus_Tick-borne_encephalitis_virus_group_Kyasanur_forest_disease_virus_JF416958","Flavivirus","GenBank sequence (see GenBank.gb)" "JQ920420","Flavivirus_Ntaya_virus_group_Duck_egg-drop_syndrome_virus_JQ920420","Flavivirus","GenBank sequence (see GenBank.gb)" "JX477686","Flavivirus_Ntaya_virus_group_Sitiawan_virus_JX477686","Flavivirus","GenBank sequence (see GenBank.gb)" "KC505248","Flavivirus_Palm_Creek_virus_KC505248","Flavivirus","GenBank sequence (see GenBank.gb)" "KC788512","Flavivirus_Kokobera_virus_group_New_Mapoon_virus_KC788512","Flavivirus","GenBank sequence (see GenBank.gb)" "KF917535","Flavivirus_Aroa_virus_KF917535","Flavivirus","GenBank sequence (see GenBank.gb)" "KF917537","Flavivirus_Ntaya_virus_group_Israel_turkey_meningoencephalomyelitis_virus_KF917537","Flavivirus","GenBank sequence (see GenBank.gb)" "KF917538","Flavivirus_Naranjal_virus_KF917538","Flavivirus","GenBank sequence (see GenBank.gb)" "KF917540","Flavivirus_Kokobera_virus_group_Stratford_virus_KF917540","Flavivirus","GenBank sequence (see GenBank.gb)" "KJ469370","Flavivirus_Batu_Cave_virus_KJ469370","Flavivirus","GenBank sequence (see GenBank.gb)" "KJ469372","Flavivirus_Tick-borne_encephalitis_virus_group_Phnom_Penh_bat_virus_KJ469372","Flavivirus","GenBank sequence (see GenBank.gb)" "KM225264","Flavivirus_Kokobera_virus_group_Bainyik_virus_KM225264","Flavivirus","GenBank sequence (see GenBank.gb)" "KM225265","Flavivirus_Kokobera_virus_group_Torres_virus_KM225265","Flavivirus","GenBank sequence (see GenBank.gb)" "KT224355","Flavivirus_Tick-borne_encephalitis_virus_group_Negishi_virus_KT224355","Flavivirus","GenBank sequence (see GenBank.gb)" "KU201526","Flavivirus_Xishuangbanna_aedes_flavivirus_KU201526","Flavivirus","GenBank sequence (see GenBank.gb)" "KU885457","Flavivirus_Tick-borne_encephalitis_virus_group_Tick-borne_encephalitis_virus_KU885457","Flavivirus","GenBank sequence (see GenBank.gb)" "KX394403","Flavivirus_Japanese_encephalitis_virus_group_Kunjin_virus_KX394403","Flavivirus","GenBank sequence (see GenBank.gb)" "NC_000943","Flavivirus_Japanese_encephalitis_virus_group_Murray_Valley_encephalitis_virus_NC_000943","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_001437","Flavivirus_Japanese_encephalitis_virus_group_Japanese_encephalitis_virus_NC_001437","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_001461","Pestivirus_Bovine_viral_diarrhea_virus_1_NC_001461","Pestivirus","RefSeq sequence (see RefSeq.gb)" "NC_001474","Flavivirus_Dengue_virus_2_NC_001474","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_001475","Flavivirus_Dengue_virus_3_NC_001475","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_001477","Flavivirus_Dengue_virus_1_NC_001477","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_001563","Flavivirus_Japanese_encephalitis_virus_group_West_Nile_virus_NC_001563","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_001564","Flavivirus_Cell_fusing_agent_virus_NC_001564","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_001672","Flavivirus_Tick-borne_encephalitis_virus_group_Tick-borne_encephalitis_virus_NC_001672","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_001809","Flavivirus_Tick-borne_encephalitis_virus_group_Louping_ill_virus_NC_001809","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_002031","Flavivirus_Yellow_fever_virus_group_Yellow_fever_virus_NC_002031","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_002032","Pestivirus_Bovine_viral_diarrhea_virus_2_NC_002032","Pestivirus","Provisional RefSeq sequence (see RefSeq.gb) removed from RefSeq, see AF002227" "NC_002640","Flavivirus_Dengue_virus_4_NC_002640","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_002657","Pestivirus_Classical_swine_fever_virus_NC_002657","Pestivirus","RefSeq sequence (see RefSeq.gb)" "NC_003635","Flavivirus_Modoc_virus_group_Modoc_virus_NC_003635","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_003675","Flavivirus_Rio_Bravo_virus_group_Rio_Bravo_virus_NC_003675","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_003676","Flavivirus_Rio_Bravo_virus_group_Apoi_virus_NC_003676","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_003679","Pestivirus_Border_disease_virus_NC_003679","Pestivirus","RefSeq sequence (see RefSeq.gb)" "NC_003687","Flavivirus_Tick-borne_encephalitis_virus_group_Powassan_virus_NC_003687","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_003690","Flavivirus_Tick-borne_encephalitis_virus_group_Langat_virus_NC_003690","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_003996","Flavivirus_Tamana_bat_virus_NC_003996","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_004102","Hepacivirus_Hepatitis_C_virus_NC_004102","Hepacivirus","RefSeq sequence (see RefSeq.gb)" "NC_004119","Flavivirus_Montana_myotis_leukoencephalitis_virus_NC_004119","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_004355","Flavivirus_Tick-borne_encephalitis_virus_group_Alkhumra_hemorrhagic_fever_virus_NC_004355","Flavivirus","Provisional RefSeq sequence (see RefSeq.gb) removed from RefSeq, see AF331718" "NC_005039","Flavivirus_Ntaya_virus_group_Yokose_virus_NC_005039","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_005062","Flavivirus_Tick-borne_encephalitis_virus_group_Omsk_hemorrhagic_fever_virus_NC_005062","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_005064","Flavivirus_Kamiti_River_virus_NC_005064","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_006551","Flavivirus_Japanese_encephalitis_virus_group_Usutu_virus_NC_006551","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_006947","Flavivirus_Tick-borne_encephalitis_virus_group_Karshi_virus_NC_006947","Flavivirus","Provisional RefSeq sequence (see RefSeq.gb) removed from RefSeq, see AY863002" "NC_007580","Flavivirus_Japanese_encephalitis_virus_group_St._Louis_encephalitis_virus_NC_007580","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_008604","Flavivirus_Culex_flavivirus_NC_008604","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_008718","Flavivirus_Rio_Bravo_virus_group_Entebbe_bat_virus_NC_008718","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_008719","Flavivirus_Mosquito-borne_viruses_Sepik_virus_NC_008719","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_009026","Flavivirus_Bussuquara_virus_NC_009026","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_009028","Flavivirus_Mosquito-borne_viruses_Ilheus_virus_NC_009028","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_009029","Flavivirus_Kokobera_virus_group_Kokobera_virus_NC_009029","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_009823","Hepacivirus_Hepatitis_C_virus_genotype_2_NC_009823","Hepacivirus","RefSeq sequence (see RefSeq.gb)" "NC_009824","Hepacivirus_Hepatitis_C_virus_genotype_3_NC_009824","Hepacivirus","RefSeq sequence (see RefSeq.gb)" "NC_009825","Hepacivirus_Hepatitis_C_virus_genotype_4_NC_009825","Hepacivirus","RefSeq sequence (see RefSeq.gb)" "NC_009826","Hepacivirus_Hepatitis_C_virus_genotype_5_NC_009826","Hepacivirus","RefSeq sequence (see RefSeq.gb)" "NC_009827","Hepacivirus_Hepatitis_C_virus_genotype_6_NC_009827","Hepacivirus","RefSeq sequence (see RefSeq.gb)" "NC_009942","Flavivirus_Japanese_encephalitis_virus_group_West_Nile_virus_NC_009942","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_012532","Flavivirus_Zika_virus_NC_012532","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_012533","Flavivirus_Kedougou_virus_NC_012533","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_012534","Flavivirus_Ntaya_virus_group_Bagaza_virus_NC_012534","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_012671","Flavivirus_Quang_Binh_virus_NC_012671","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_012735","Flavivirus_Yellow_fever_virus_group_Wesselsbron_virus_NC_012735","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_012932","Flavivirus_Aedes_flavivirus_NC_012932","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_015843","Flavivirus_Ntaya_virus_group_Tembusu_virus_NC_015843","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_016997","Flavivirus_Donggang_virus_NC_016997","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_017086","Flavivirus_Chaoyang_virus_NC_017086","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_018705","Flavivirus_Ntaya_virus_group_Ntaya_virus_NC_018705","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_020902","Pegivirus_Equine_pegivirus_1_NC_020902","Pegivirus","RefSeq sequence (see RefSeq.gb)" "NC_021154","Pegivirus_Rodent_pegivirus_NC_021154","Pegivirus","RefSeq sequence (see RefSeq.gb)" "NC_023424","Flavivirus_Seaborne_tick-borne_virus_group_Tyuleniy_virus_NC_023424","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_023439","Flavivirus_Kama_virus_NC_023439","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_024017","Flavivirus_Nhumirim_virus_NC_024017","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_024299","Flavivirus_Nienokoue_virus_NC_024299","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_024377","Pegivirus_Simian_pegivirus_NC_024377","Pegivirus","RefSeq sequence (see RefSeq.gb)" "NC_024805","Flavivirus_Ilomantsi_virus_NC_024805","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_024806","Flavivirus_Lammi_virus_NC_024806","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_025679","Pegivirus_Norway_rat_pegivirus_NC_025679","Pegivirus","RefSeq sequence (see RefSeq.gb)" "NC_026620","Flavivirus_Modoc_virus_group_Jutiapa_virus_NC_026620","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_026623","Flavivirus_Cacipacore_virus_NC_026623","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_026624","Flavivirus_Sokoluk_virus_NC_026624","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_027700","Flavivirus_Fitzroy_River_virus_NC_027700","Flavivirus","Provisional RefSeq sequence (see RefSeq.gb) removed from RefSeq, see K73884" "NC_027709","Flavivirus_Spanish_goat_encephalitis_virus_NC_027709","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_027817","Flavivirus_Parramatta_River_virus_NC_027817","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_027819","Flavivirus_Mercadeo_virus_NC_027819","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_027998","Pegivirus_Human_pegivirus_2_NC_027998","Pegivirus","RefSeq sequence (see RefSeq.gb)" "NC_027999","Flavivirus_Paraiso_Escondido_virus_NC_027999","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_029055","Flavivirus_Spondweni_virus_NC_029055","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_030289","Flavivirus_Yellow_fever_virus_group_Edge_Hill_virus_NC_030289","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_030290","Flavivirus_Culiseta_flavivirus_NC_030290","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_030400","Flavivirus_Nakiwogo_virus_NC_030400","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_030401","Flavivirus_Hanko_virus_NC_030401","Flavivirus","RefSeq sequence (see RefSeq.gb)" "NC_030791","Hepacivirus_Hepatitis_C_virus_NC_030791","Hepacivirus","RefSeq sequence (see RefSeq.gb)" "NC_024077","Flavivirus_Soybean_cyst_nematode_virus_5_NC_024077","Flavivirus","Provisional RefSeq sequence (not in RefSeq.gb) removed from our analysis after being identified as an outlier, see KF726084"