Bins that were identified in the merged profile database 'Benzene biofilm' and stored in the database as "maxbin2 final" collection, describe 112 bins accountig for 500,649,046 nucleotides, which represent 100.00% of all nucleotides stored in the contigs database, and 100.00% of nucleotides stored in the profile database.

Basics

The merged profile database that was generated with the minimum contig length of 1,000 contained 90,979 contigs, which correspond to 100% of all contigs, and 100% of all nucleotides found in the contigs database.
Profile DB for Benzene biofilm w/ 2 samples.
Key Value
Created on 2020-02-12 18:36:37
Version 31
Minimum contig length 1,000
Number of contigs 90,979
Number of splits 97,297
Total nucleotides 500.65 Mb
SNVs profiled 1
SCVs profiled 0
Contigs DB
Key Value
Created on 2020-02-12 18:36:37
Version 14
Split length 20,000
Number of contigs 90,979
Number of splits 97,297
Total nucleotides 500.65 Mb
K-mer size 4
Genes are called 1
Splits consider gene calls 1
Gene function sources COG_CATEGORY, COG_FUNCTION

Profile DB description

No description is provided

Summary of Bins (112)

Summary of of each bin. You can download the information below also as a TAB-delimited file. Here is another TAB-delimited file that reports data for each single profile (such as number of reads mapped, etc).

Bin Source Taxonomy Total Size Num Contigs N50 GC Content Compl. Red. SCG Domain
 
 bin_000 UNKNOWN 15,403 8,098 60.47% 842.25% bacteria
 
 bin_063 UNKNOWN 1,647 6,194 74.93% 38.03% bacteria
 
 bin_038_Gemmatimonadetes UNKNOWN 73 111,952 67.75% 2.82% bacteria
 
 bin_056_Proteobacteria UNKNOWN 515 30,096 63.45% 7.04% bacteria
 
 bin_023_Proteobacteria UNKNOWN 234 41,764 61.10% 7.04% bacteria
 
 bin_004_Proteobacteria UNKNOWN 27 206,048 65.67% 2.82% bacteria
 
 bin_032_Bacteroidetes UNKNOWN 100 101,615 36.55% 0.00% bacteria
 
 bin_064_Actinobacteria UNKNOWN 281 22,637 67.43% 1.41% bacteria
 
 bin_045_Proteobacteria UNKNOWN 324 49,748 62.30% 36.62% bacteria
 
 bin_062_Proteobacteria UNKNOWN 178 48,554 55.90% 1.41% bacteria
 
 bin_048_Proteobacteria UNKNOWN 322 36,850 61.17% 0.00% bacteria
 
 bin_047_Proteobacteria UNKNOWN 111 83,634 61.42% 5.63% bacteria
 
 bin_009_Firmicutes UNKNOWN 93 87,433 44.35% 0.00% bacteria
 
 bin_030_Verrucomicrobia UNKNOWN 23 212,925 66.55% 1.41% bacteria
 
 bin_051 UNKNOWN 870 8,436 70.83% 38.03% bacteria
 
 bin_003_Planctomycetes UNKNOWN 208 30,344 40.77% 12.68% bacteria
 
 bin_075 UNKNOWN 1,484 8,254 63.41% 45.07% bacteria
 
 bin_058 UNKNOWN 184 83,902 46.87% 1.41% bacteria
 
 bin_031_Chloroflexi UNKNOWN 51 149,493 59.49% 1.41% bacteria
 
 bin_016_Proteobacteria UNKNOWN 81 178,727 62.81% 5.63% bacteria
 
 bin_049_Ignavibacteriae UNKNOWN 253 42,236 35.87% 1.41% bacteria
 
 bin_020_Ignavibacteriae UNKNOWN 59 107,749 40.58% 1.41% bacteria
 
 bin_010_Ignavibacteriae UNKNOWN 287 23,711 33.34% 1.41% bacteria
 
 bin_037 UNKNOWN 572 11,089 66.75% 2.82% bacteria
 
 bin_067_Ignavibacteriae UNKNOWN 315 16,384 40.32% 5.63% bacteria
 
 bin_006_Proteobacteria UNKNOWN 120 60,502 64.13% 7.04% bacteria
 
 bin_086_Bacteroidetes UNKNOWN 117 42,493 39.11% 1.41% bacteria
 
 bin_013_mixed UNKNOWN 28 331,130 58.98% 0.00% bacteria
 
 bin_029_Proteobacteria UNKNOWN 179 30,579 68.65% 8.45% bacteria
 
 bin_014_Proteobacteria UNKNOWN 148 81,157 69.94% 0.00% bacteria
 
 bin_053 UNKNOWN 338 54,079 68.09% 91.55% bacteria
 
 bin_068_Proteobacteria UNKNOWN 485 13,567 68.46% 4.23% bacteria
 
 bin_005_Chloroflexi UNKNOWN 57 149,802 54.03% 2.82% bacteria
 
 bin_026_Chloroflexi UNKNOWN 40 253,413 61.13% 0.00% bacteria
 
 bin_007_Acidobacteria UNKNOWN 15 392,789 53.74% 1.41% bacteria
 
 bin_101_Chlorobi UNKNOWN 60 74,637 35.73% 0.00% bacteria
 
 bin_059 UNKNOWN 29 339,977 50.56% 0.00% bacteria
 
 bin_050_Ignavibacteriae UNKNOWN 199 26,951 61.50% 2.82% bacteria
 
 bin_090_Gemmatimonadetes UNKNOWN 21 170,057 67.04% 0.00% bacteria
 
 bin_096_Actinobacteria UNKNOWN 468 6,710 65.84% 4.23% bacteria
 
 bin_072 UNKNOWN 625 39,721 57.95% 28.17% bacteria
 
 bin_102 UNKNOWN 2,482 3,593 59.17% 50.70% bacteria
 
 bin_087_Proteobacteria UNKNOWN 994 9,481 69.31% 14.08% bacteria
 
 bin_036_Proteobacteria UNKNOWN 75 136,744 70.10% 4.23% bacteria
 
 bin_012_Verrucomicrobia UNKNOWN 78 79,543 62.51% 2.82% bacteria
 
 bin_041_Chloroflexi UNKNOWN 227 28,430 63.52% 1.41% bacteria
 
 bin_070_Ignavibacteriae UNKNOWN 94 55,493 55.04% 1.41% bacteria
 
 bin_001_Chloroflexi UNKNOWN 60 121,528 59.27% 1.41% bacteria
 
 bin_022_Armatimonadetes UNKNOWN 35 94,516 63.41% 1.41% bacteria
 
 bin_018_Bacteroidetes UNKNOWN 19 283,578 32.96% 1.41% bacteria
 
 bin_069_Bacteroidetes UNKNOWN 173 30,327 35.28% 1.41% bacteria
 
 bin_060 UNKNOWN 1,032 18,963 60.53% 22.54% bacteria
 
 bin_071 UNKNOWN 635 40,486 70.34% 29.58% bacteria
 
 bin_035 UNKNOWN 144 57,260 56.22% 0.00% bacteria
 
 bin_025_Proteobacteria UNKNOWN 64 109,280 70.77% 0.00% bacteria
 
 bin_092_Proteobacteria UNKNOWN 955 3,959 69.89% 5.63% bacteria
 
 bin_039_Chloroflexi UNKNOWN 173 23,317 71.08% 2.82% bacteria
 
 bin_091 UNKNOWN 2,551 3,277 60.50% 32.39% bacteria
 
 bin_019_Proteobacteria UNKNOWN 166 48,779 69.79% 7.04% bacteria
 
 bin_066_Actinobacteria UNKNOWN 255 24,209 65.56% 1.41% bacteria
 
 bin_034_Proteobacteria UNKNOWN 270 16,787 62.66% 9.86% bacteria
 
 bin_084_Actinobacteria UNKNOWN 265 13,840 73.14% 5.63% bacteria
 
 bin_095 UNKNOWN 2,301 3,349 62.18% 64.79% bacteria
 
 bin_042_Chloroflexi UNKNOWN 72 60,132 68.40% 2.82% bacteria
 
 bin_076_Gemmatimonadetes UNKNOWN 272 11,740 69.90% 2.82% bacteria
 
 bin_021 UNKNOWN 56 54,077 59.94% 0.00% bacteria
 
 bin_052 UNKNOWN 118 62,564 65.04% 11.27% bacteria
 
 bin_017 UNKNOWN 610 6,114 69.99% 4.23% bacteria
 
 bin_046_Ignavibacteriae UNKNOWN 20 101,247 46.99% 0.00% bacteria
 
 bin_065 UNKNOWN 2,039 8,458 50.26% 43.66% bacteria
 
 bin_024 UNKNOWN 445 13,239 67.68% 7.04% bacteria
 
 bin_002_Unknown UNKNOWN 36 56,800 36.61% 2.82% bacteria
 
 bin_109 UNKNOWN 4,519 1,768 57.44% 76.06% bacteria
 
 bin_082 UNKNOWN 1,316 6,874 71.38% 32.39% bacteria
 
 bin_033_Ignavibacteriae UNKNOWN 39 77,228 53.96% 1.41% bacteria
 
 bin_027 UNKNOWN 797 3,858 66.45% 14.08% bacteria
 
 bin_103 UNKNOWN 2,117 2,127 67.18% 33.80% bacteria
 
 bin_057 UNKNOWN 341 13,652 66.00% 4.23% bacteria
 
 bin_028 UNKNOWN 1,158 9,164 71.03% 8.45% bacteria
 
 bin_079 UNKNOWN 2,118 3,367 72.49% 26.76% bacteria
 
 bin_081 UNKNOWN 1,125 10,355 57.80% 26.76% bacteria
 
 bin_077 UNKNOWN 672 15,886 67.63% 25.35% bacteria
 
 bin_083 UNKNOWN 1,030 9,475 70.63% 32.39% bacteria
 
 bin_089 UNKNOWN 1,664 2,337 63.32% 21.13% bacteria
 
 bin_111 UNKNOWN 2,205 1,699 70.10% 38.03% bacteria
 
 bin_106 UNKNOWN 1,644 1,889 61.53% 8.45% bacteria
 
 bin_074 UNKNOWN 556 13,834 67.89% 11.27% bacteria
 
 bin_100 UNKNOWN 1,278 2,398 66.79% 57.75% bacteria
 
 bin_094 UNKNOWN 1,399 8,343 65.75% 9.86% bacteria
 
 bin_080 UNKNOWN 1,245 2,943 62.78% 43.66% bacteria
 
 bin_043 UNKNOWN 298 22,797 72.94% 1.41% bacteria
 
 bin_093 UNKNOWN 1,032 2,622 65.26% 50.70% bacteria
 
 bin_105 UNKNOWN 2,335 1,741 62.23% 28.17% bacteria
 
 bin_110 UNKNOWN 1,655 1,546 54.49% 14.08% bacteria
 
 bin_061 UNKNOWN 372 7,287 62.23% 23.94% bacteria
 
 bin_108 UNKNOWN 2,986 1,576 65.74% 18.31% bacteria
 
 bin_085 UNKNOWN 1,079 4,545 65.41% 14.08% bacteria
 
 bin_107 UNKNOWN 1,202 1,818 73.40% 2.82% bacteria
 
 bin_054 UNKNOWN 278 18,657 69.50% 11.27% bacteria
 
 bin_099 UNKNOWN 3,497 2,130 63.52% 11.27% bacteria
 
 bin_008_Planctomycetes UNKNOWN 26 26,585 62.65% 0.00% bacteria
 
 bin_104 UNKNOWN 1,197 1,898 66.91% 22.54% bacteria
 
 bin_088 UNKNOWN 976 2,995 69.82% 9.86% bacteria
 
 bin_097 UNKNOWN 1,438 2,096 71.17% 2.82% bacteria
 
 bin_044 UNKNOWN 420 20,074 76.37% 1.41% bacteria
 
 bin_098 UNKNOWN 1,384 2,223 59.24% 8.45% bacteria
 
 bin_055 UNKNOWN 403 14,004 70.78% 11.27% bacteria
 
 bin_073 UNKNOWN 1,295 2,274 64.66% 9.86% bacteria
 
 bin_078 UNKNOWN 777 4,822 67.84% 4.23% bacteria
 
 bin_021_rest UNKNOWN 39 23,312 59.08% 0.00% blank
 
 bin_011 UNKNOWN 19 65,316 59.63% 0.00% blank
 
 bin_015 UNKNOWN 32 51,870 57.42% 0.00% blank

Across Samples (2)

TAB-delimited matrix file for std_coverage: bins_across_samples/std_coverage.txt

Bin SAMPL ... SAMPL ...
 
 bin_000 7.23 8.39
 
 bin_063 3.38 3.29
 
 bin_038_Gemmatimonadetes 4.81 4.85
 
 bin_056_Proteobacteria 2.81 2.77
 
 bin_023_Proteobacteria 11.64 13.82
 
 bin_004_Proteobacteria 32.23 35.99
 
 bin_032_Bacteroidetes 6.90 7.82
 
 bin_064_Actinobacteria 3.44 3.70
 
 bin_045_Proteobacteria 5.05 5.71
 
 bin_062_Proteobacteria 4.10 4.27
 
 bin_048_Proteobacteria 4.52 4.60
 
 bin_047_Proteobacteria 4.10 4.11
 
 bin_009_Firmicutes 32.13 35.89
 
 bin_030_Verrucomicrobia 6.14 6.07
 
 bin_051 3.64 3.93
 
 bin_003_Planctomycetes 112.91 113.22
 
 bin_075 2.88 2.87
 
 bin_058 5.55 7.05
 
 bin_031_Chloroflexi 5.93 6.48
 
 bin_016_Proteobacteria 15.42 15.53
 
 bin_049_Ignavibacteriae 4.93 6.32
 
 bin_020_Ignavibacteriae 11.99 13.86
 
 bin_010_Ignavibacteriae 34.80 34.23
 
 bin_037 6.29 7.66
 
 bin_067_Ignavibacteriae 3.39 4.74
 
 bin_006_Proteobacteria 37.77 47.57
 
 bin_086_Bacteroidetes 2.60 3.48
 
 bin_013_mixed 14.65 17.74
 
 bin_029_Proteobacteria 9.10 10.21
 
 bin_014_Proteobacteria 18.59 17.76
 
 bin_053 4.46 4.72
 
 bin_068_Proteobacteria 4.55 5.00
 
 bin_005_Chloroflexi 36.45 48.21
 
 bin_026_Chloroflexi 8.43 8.07
 
 bin_007_Acidobacteria 23.55 25.35
 
 bin_101_Chlorobi 2.34 4.62
 
 bin_059 3.57 6.16
 
 bin_050_Ignavibacteriae 3.92 6.04
 
 bin_090_Gemmatimonadetes 2.47 4.67
 
 bin_096_Actinobacteria 2.19 2.96
 
 bin_072 3.40 3.97
 
 bin_102 2.04 2.29
 
 bin_087_Proteobacteria 2.78 3.50
 
 bin_036_Proteobacteria 5.36 5.11
 
 bin_012_Verrucomicrobia 14.60 15.34
 
 bin_041_Chloroflexi 4.71 5.19
 
 bin_070_Ignavibacteriae 3.25 4.69
 
 bin_001_Chloroflexi 220.55 279.34
 
 bin_022_Armatimonadetes 9.56 10.11
 
 bin_018_Bacteroidetes 14.07 15.94
 
 bin_069_Bacteroidetes 3.24 3.85
 
 bin_060 4.05 3.91
 
 bin_071 3.70 4.03
 
 bin_035 5.19 5.24
 
 bin_025_Proteobacteria 9.62 10.68
 
 bin_092_Proteobacteria 2.26 2.75
 
 bin_039_Chloroflexi 4.95 5.31
 
 bin_091 2.19 2.29
 
 bin_019_Proteobacteria 14.50 14.78
 
 bin_066_Actinobacteria 4.31 4.67
 
 bin_034_Proteobacteria 6.52 6.98
 
 bin_084_Actinobacteria 3.65 3.44
 
 bin_095 2.11 2.46
 
 bin_042_Chloroflexi 4.28 4.76
 
 bin_076_Gemmatimonadetes 3.19 3.26
 
 bin_021 10.97 12.54
 
 bin_052 4.63 5.03
 
 bin_017 17.67 18.68
 
 bin_046_Ignavibacteriae 4.00 8.11
 
 bin_065 3.21 3.84
 
 bin_024 12.20 12.91
 
 bin_002_Unknown 137.52 181.91
 
 bin_109 1.82 2.03
 
 bin_082 2.24 2.69
 
 bin_033_Ignavibacteriae 5.90 6.15
 
 bin_027 12.05 16.28
 
 bin_103 1.96 2.27
 
 bin_057 12.00 17.14
 
 bin_028 9.24 9.41
 
 bin_079 3.08 3.05
 
 bin_081 2.15 2.56
 
 bin_077 2.84 3.21
 
 bin_083 2.73 3.05
 
 bin_089 2.83 3.00
 
 bin_111 1.69 2.11
 
 bin_106 1.94 2.59
 
 bin_074 2.99 3.39
 
 bin_100 1.93 2.35
 
 bin_094 2.22 2.67
 
 bin_080 3.10 3.26
 
 bin_043 6.10 9.70
 
 bin_093 2.35 2.71
 
 bin_105 1.84 2.02
 
 bin_110 1.73 1.87
 
 bin_061 6.17 8.74
 
 bin_108 1.78 2.03
 
 bin_085 2.66 2.65
 
 bin_107 1.81 2.12
 
 bin_054 4.78 4.98
 
 bin_099 2.04 2.21
 
 bin_008_Planctomycetes 25.35 28.80
 
 bin_104 1.96 2.25
 
 bin_088 2.26 2.61
 
 bin_097 2.17 2.27
 
 bin_044 5.48 8.50
 
 bin_098 2.09 2.45
 
 bin_055 4.01 4.21
 
 bin_073 3.67 3.87
 
 bin_078 7.82 11.26
 
 bin_021_rest 13.88 15.16
 
 bin_011 54.13 64.04
 
 bin_015 49.66 63.77

TAB-delimited matrix file for mean_coverage: bins_across_samples/mean_coverage.txt

Bin SAMPL ... SAMPL ...
 
 bin_000 27.33 33.46
 
 bin_063 7.79 8.05
 
 bin_038_Gemmatimonadetes 18.17 17.60
 
 bin_056_Proteobacteria 7.09 6.95
 
 bin_023_Proteobacteria 54.86 68.90
 
 bin_004_Proteobacteria 346.69 389.57
 
 bin_032_Bacteroidetes 25.12 30.00
 
 bin_064_Actinobacteria 8.74 9.89
 
 bin_045_Proteobacteria 13.11 14.84
 
 bin_062_Proteobacteria 9.84 10.35
 
 bin_048_Proteobacteria 11.91 11.69
 
 bin_047_Proteobacteria 12.43 11.69
 
 bin_009_Firmicutes 238.96 281.20
 
 bin_030_Verrucomicrobia 29.39 26.97
 
 bin_051 9.60 10.68
 
 bin_003_Planctomycetes 603.65 614.38
 
 bin_075 6.33 6.67
 
 bin_058 15.34 21.17
 
 bin_031_Chloroflexi 25.58 29.27
 
 bin_016_Proteobacteria 98.79 93.88
 
 bin_049_Ignavibacteriae 13.76 21.24
 
 bin_020_Ignavibacteriae 69.08 87.72
 
 bin_010_Ignavibacteriae 188.52 187.21
 
 bin_037 19.68 24.15
 
 bin_067_Ignavibacteriae 8.61 15.10
 
 bin_006_Proteobacteria 273.86 353.22
 
 bin_086_Bacteroidetes 5.40 9.29
 
 bin_013_mixed 113.96 148.06
 
 bin_029_Proteobacteria 34.56 35.54
 
 bin_014_Proteobacteria 111.94 106.09
 
 bin_053 11.36 11.89
 
 bin_068_Proteobacteria 8.38 10.11
 
 bin_005_Chloroflexi 343.82 465.84
 
 bin_026_Chloroflexi 49.17 44.48
 
 bin_007_Acidobacteria 260.10 291.96
 
 bin_101_Chlorobi 4.37 14.81
 
 bin_059 10.29 27.35
 
 bin_050_Ignavibacteriae 11.77 23.64
 
 bin_090_Gemmatimonadetes 5.01 16.64
 
 bin_096_Actinobacteria 4.05 7.14
 
 bin_072 7.52 9.52
 
 bin_102 3.53 5.05
 
 bin_087_Proteobacteria 5.63 8.26
 
 bin_036_Proteobacteria 19.50 16.91
 
 bin_012_Verrucomicrobia 121.99 126.72
 
 bin_041_Chloroflexi 16.29 18.22
 
 bin_070_Ignavibacteriae 8.36 15.79
 
 bin_001_Chloroflexi 1.86 Kb 2.41 Kb
 
 bin_022_Armatimonadetes 64.47 67.56
 
 bin_018_Bacteroidetes 82.18 98.46
 
 bin_069_Bacteroidetes 7.43 9.53
 
 bin_060 10.36 9.37
 
 bin_071 8.35 10.23
 
 bin_035 19.72 19.41
 
 bin_025_Proteobacteria 53.24 59.81
 
 bin_092_Proteobacteria 4.26 6.28
 
 bin_039_Chloroflexi 16.93 18.11
 
 bin_091 4.19 5.13
 
 bin_019_Proteobacteria 81.36 79.31
 
 bin_066_Actinobacteria 10.60 11.96
 
 bin_034_Proteobacteria 21.07 23.24
 
 bin_084_Actinobacteria 9.50 8.51
 
 bin_095 3.87 5.43
 
 bin_042_Chloroflexi 15.10 17.33
 
 bin_076_Gemmatimonadetes 7.83 8.05
 
 bin_021 66.01 79.87
 
 bin_052 11.79 12.18
 
 bin_017 83.25 87.79
 
 bin_046_Ignavibacteriae 12.66 43.81
 
 bin_065 9.62 12.67
 
 bin_024 55.17 57.48
 
 bin_002_Unknown 1.13 Kb 1.56 Kb
 
 bin_109 2.92 4.30
 
 bin_082 4.64 6.35
 
 bin_033_Ignavibacteriae 24.08 25.49
 
 bin_027 37.99 53.96
 
 bin_103 3.38 5.00
 
 bin_057 16.81 29.51
 
 bin_028 37.62 37.89
 
 bin_079 6.44 7.03
 
 bin_081 4.23 5.94
 
 bin_077 6.12 7.60
 
 bin_083 5.55 7.08
 
 bin_089 6.30 7.47
 
 bin_111 2.64 4.72
 
 bin_106 3.21 5.74
 
 bin_074 6.52 8.09
 
 bin_100 3.30 5.18
 
 bin_094 4.14 6.18
 
 bin_080 6.25 7.40
 
 bin_043 15.71 29.60
 
 bin_093 4.26 5.92
 
 bin_105 3.02 4.39
 
 bin_110 2.79 3.98
 
 bin_061 11.70 19.14
 
 bin_108 2.90 4.44
 
 bin_085 5.81 6.12
 
 bin_107 3.09 4.81
 
 bin_054 11.35 11.99
 
 bin_099 3.62 4.83
 
 bin_008_Planctomycetes 239.71 283.82
 
 bin_104 3.30 4.94
 
 bin_088 4.24 5.96
 
 bin_097 4.03 5.12
 
 bin_044 12.95 25.30
 
 bin_098 3.55 5.17
 
 bin_055 10.47 10.90
 
 bin_073 7.93 8.85
 
 bin_078 10.31 17.90
 
 bin_021_rest 67.71 78.94
 
 bin_011 170.61 212.26
 
 bin_015 125.84 155.41

TAB-delimited matrix file for mean_coverage_Q2Q3: bins_across_samples/mean_coverage_Q2Q3.txt

Bin SAMPL ... SAMPL ...
 
 bin_000 27.41 33.62
 
 bin_063 7.70 7.92
 
 bin_038_Gemmatimonadetes 18.00 17.43
 
 bin_056_Proteobacteria 6.93 6.77
 
 bin_023_Proteobacteria 54.78 68.89
 
 bin_004_Proteobacteria 348.33 391.30
 
 bin_032_Bacteroidetes 24.81 29.58
 
 bin_064_Actinobacteria 8.58 9.73
 
 bin_045_Proteobacteria 12.78 14.38
 
 bin_062_Proteobacteria 9.46 9.94
 
 bin_048_Proteobacteria 11.64 11.37
 
 bin_047_Proteobacteria 12.23 11.46
 
 bin_009_Firmicutes 239.18 281.73
 
 bin_030_Verrucomicrobia 29.18 26.72
 
 bin_051 9.42 10.49
 
 bin_003_Planctomycetes 604.41 615.74
 
 bin_075 6.16 6.48
 
 bin_058 15.28 21.09
 
 bin_031_Chloroflexi 25.30 28.99
 
 bin_016_Proteobacteria 98.36 93.36
 
 bin_049_Ignavibacteriae 13.48 21.01
 
 bin_020_Ignavibacteriae 68.70 87.27
 
 bin_010_Ignavibacteriae 192.06 190.79
 
 bin_037 19.52 23.87
 
 bin_067_Ignavibacteriae 8.41 14.97
 
 bin_006_Proteobacteria 278.36 359.08
 
 bin_086_Bacteroidetes 5.20 9.08
 
 bin_013_mixed 114.08 148.37
 
 bin_029_Proteobacteria 34.20 34.89
 
 bin_014_Proteobacteria 112.44 106.40
 
 bin_053 11.05 11.54
 
 bin_068_Proteobacteria 7.75 9.46
 
 bin_005_Chloroflexi 344.40 467.16
 
 bin_026_Chloroflexi 48.93 44.30
 
 bin_007_Acidobacteria 259.64 291.78
 
 bin_101_Chlorobi 4.15 14.55
 
 bin_059 10.10 27.11
 
 bin_050_Ignavibacteriae 11.61 23.59
 
 bin_090_Gemmatimonadetes 4.80 16.42
 
 bin_096_Actinobacteria 3.88 6.98
 
 bin_072 7.23 9.18
 
 bin_102 3.35 4.89
 
 bin_087_Proteobacteria 5.43 8.05
 
 bin_036_Proteobacteria 19.27 16.66
 
 bin_012_Verrucomicrobia 122.06 126.77
 
 bin_041_Chloroflexi 16.14 18.03
 
 bin_070_Ignavibacteriae 8.16 15.56
 
 bin_001_Chloroflexi 1.88 Kb 2.44 Kb
 
 bin_022_Armatimonadetes 64.31 67.40
 
 bin_018_Bacteroidetes 81.41 97.69
 
 bin_069_Bacteroidetes 7.17 9.23
 
 bin_060 10.14 9.10
 
 bin_071 8.15 10.04
 
 bin_035 19.61 19.26
 
 bin_025_Proteobacteria 53.03 59.51
 
 bin_092_Proteobacteria 4.09 6.11
 
 bin_039_Chloroflexi 16.79 17.96
 
 bin_091 4.04 4.97
 
 bin_019_Proteobacteria 81.85 79.38
 
 bin_066_Actinobacteria 10.37 11.70
 
 bin_034_Proteobacteria 20.72 22.88
 
 bin_084_Actinobacteria 9.40 8.34
 
 bin_095 3.70 5.26
 
 bin_042_Chloroflexi 14.93 17.15
 
 bin_076_Gemmatimonadetes 7.71 7.86
 
 bin_021 65.79 79.64
 
 bin_052 11.35 11.65
 
 bin_017 85.81 90.52
 
 bin_046_Ignavibacteriae 12.44 43.62
 
 bin_065 9.90 12.99
 
 bin_024 55.59 57.79
 
 bin_002_Unknown 1.13 Kb 1.57 Kb
 
 bin_109 2.74 4.12
 
 bin_082 4.47 6.19
 
 bin_033_Ignavibacteriae 23.79 25.20
 
 bin_027 38.56 55.01
 
 bin_103 3.22 4.85
 
 bin_057 14.22 26.07
 
 bin_028 38.00 38.16
 
 bin_079 6.27 6.87
 
 bin_081 4.06 5.75
 
 bin_077 5.94 7.39
 
 bin_083 5.36 6.90
 
 bin_089 6.36 7.58
 
 bin_111 2.47 4.59
 
 bin_106 3.05 5.61
 
 bin_074 6.31 7.86
 
 bin_100 3.11 5.02
 
 bin_094 3.98 6.03
 
 bin_080 6.04 7.19
 
 bin_043 15.34 29.12
 
 bin_093 4.05 5.70
 
 bin_105 2.85 4.24
 
 bin_110 2.62 3.83
 
 bin_061 10.85 18.14
 
 bin_108 2.74 4.31
 
 bin_085 5.68 5.96
 
 bin_107 2.94 4.69
 
 bin_054 10.92 11.55
 
 bin_099 3.45 4.67
 
 bin_008_Planctomycetes 240.20 284.58
 
 bin_104 3.12 4.79
 
 bin_088 4.07 5.81
 
 bin_097 3.88 4.98
 
 bin_044 12.81 25.22
 
 bin_098 3.36 4.98
 
 bin_055 10.31 10.72
 
 bin_073 7.75 8.65
 
 bin_078 8.70 15.87
 
 bin_021_rest 68.15 79.57
 
 bin_011 166.64 207.04
 
 bin_015 115.91 142.04

TAB-delimited matrix file for max_normalized_ratio: bins_across_samples/max_normalized_ratio.txt

Bin SAMPL ... SAMPL ...
 
 bin_000 0.80 0.94
 
 bin_063 0.93 0.84
 
 bin_038_Gemmatimonadetes 1.00 0.80
 
 bin_056_Proteobacteria 0.90 0.83
 
 bin_023_Proteobacteria 0.93 0.97
 
 bin_004_Proteobacteria 1.00 0.93
 
 bin_032_Bacteroidetes 0.95 0.96
 
 bin_064_Actinobacteria 0.97 0.91
 
 bin_045_Proteobacteria 0.96 0.88
 
 bin_062_Proteobacteria 0.99 0.87
 
 bin_048_Proteobacteria 0.98 0.79
 
 bin_047_Proteobacteria 0.98 0.76
 
 bin_009_Firmicutes 1.00 0.97
 
 bin_030_Verrucomicrobia 1.00 0.76
 
 bin_051 0.91 0.90
 
 bin_003_Planctomycetes 1.00 0.84
 
 bin_075 0.94 0.85
 
 bin_058 0.83 0.99
 
 bin_031_Chloroflexi 1.00 0.94
 
 bin_016_Proteobacteria 1.00 0.78
 
 bin_049_Ignavibacteriae 0.74 0.98
 
 bin_020_Ignavibacteriae 0.95 1.00
 
 bin_010_Ignavibacteriae 1.00 0.82
 
 bin_037 0.93 0.93
 
 bin_067_Ignavibacteriae 0.68 1.00
 
 bin_006_Proteobacteria 0.94 1.00
 
 bin_086_Bacteroidetes 0.69 1.00
 
 bin_013_mixed 0.93 1.00
 
 bin_029_Proteobacteria 0.98 0.83
 
 bin_014_Proteobacteria 1.00 0.78
 
 bin_053 0.98 0.84
 
 bin_068_Proteobacteria 0.94 0.96
 
 bin_005_Chloroflexi 0.89 1.00
 
 bin_026_Chloroflexi 1.00 0.75
 
 bin_007_Acidobacteria 1.00 0.93
 
 bin_101_Chlorobi 0.35 1.00
 
 bin_059 0.45 1.00
 
 bin_050_Ignavibacteriae 0.60 1.00
 
 bin_090_Gemmatimonadetes 0.35 1.00
 
 bin_096_Actinobacteria 0.67 1.00
 
 bin_072 0.90 0.95
 
 bin_102 0.79 0.96
 
 bin_087_Proteobacteria 0.81 0.99
 
 bin_036_Proteobacteria 1.00 0.72
 
 bin_012_Verrucomicrobia 1.00 0.86
 
 bin_041_Chloroflexi 1.00 0.92
 
 bin_070_Ignavibacteriae 0.64 1.00
 
 bin_001_Chloroflexi 0.94 1.00
 
 bin_022_Armatimonadetes 1.00 0.86
 
 bin_018_Bacteroidetes 0.99 0.98
 
 bin_069_Bacteroidetes 0.90 0.97
 
 bin_060 0.98 0.73
 
 bin_071 0.87 0.89
 
 bin_035 1.00 0.81
 
 bin_025_Proteobacteria 1.00 0.93
 
 bin_092_Proteobacteria 0.80 0.98
 
 bin_039_Chloroflexi 0.99 0.87
 
 bin_091 0.85 0.91
 
 bin_019_Proteobacteria 1.00 0.80
 
 bin_066_Actinobacteria 0.97 0.91
 
 bin_034_Proteobacteria 0.98 0.89
 
 bin_084_Actinobacteria 1.00 0.73
 
 bin_095 0.80 0.96
 
 bin_042_Chloroflexi 0.99 0.95
 
 bin_076_Gemmatimonadetes 0.99 0.84
 
 bin_021 0.99 0.99
 
 bin_052 0.99 0.84
 
 bin_017 1.00 0.87
 
 bin_046_Ignavibacteriae 0.35 1.00
 
 bin_065 0.65 0.97
 
 bin_024 1.00 0.85
 
 bin_002_Unknown 0.87 1.00
 
 bin_109 0.74 0.95
 
 bin_082 0.67 0.91
 
 bin_033_Ignavibacteriae 1.00 0.87
 
 bin_027 0.84 0.99
 
 bin_103 0.75 0.96
 
 bin_057 0.66 0.99
 
 bin_028 1.00 0.83
 
 bin_079 0.93 0.88
 
 bin_081 0.74 0.96
 
 bin_077 0.89 0.94
 
 bin_083 0.86 0.95
 
 bin_089 0.90 0.88
 
 bin_111 0.63 0.98
 
 bin_106 0.66 0.99
 
 bin_074 0.89 0.95
 
 bin_100 0.67 0.96
 
 bin_094 0.76 0.96
 
 bin_080 0.87 0.91
 
 bin_043 0.64 0.99
 
 bin_093 0.80 0.96
 
 bin_105 0.75 0.95
 
 bin_110 0.76 0.94
 
 bin_061 0.66 0.98
 
 bin_108 0.73 0.96
 
 bin_085 0.95 0.85
 
 bin_107 0.72 0.97
 
 bin_054 0.98 0.87
 
 bin_099 0.79 0.93
 
 bin_008_Planctomycetes 1.00 0.98
 
 bin_104 0.75 0.97
 
 bin_088 0.81 0.97
 
 bin_097 0.86 0.93
 
 bin_044 0.62 1.00
 
 bin_098 0.75 0.95
 
 bin_055 0.98 0.85
 
 bin_073 0.92 0.89
 
 bin_078 0.60 0.99
 
 bin_021_rest 0.99 0.96
 
 bin_011 0.92 0.93
 
 bin_015 0.94 0.94

TAB-delimited matrix file for relative_abundance: bins_across_samples/relative_abundance.txt

Bin SAMPL ... SAMPL ...
 
 bin_000 0.45 0.55
 
 bin_063 0.52 0.48
 
 bin_038_Gemmatimonadetes 0.56 0.44
 
 bin_056_Proteobacteria 0.52 0.48
 
 bin_023_Proteobacteria 0.49 0.51
 
 bin_004_Proteobacteria 0.52 0.48
 
 bin_032_Bacteroidetes 0.50 0.50
 
 bin_064_Actinobacteria 0.51 0.49
 
 bin_045_Proteobacteria 0.52 0.48
 
 bin_062_Proteobacteria 0.54 0.46
 
 bin_048_Proteobacteria 0.55 0.45
 
 bin_047_Proteobacteria 0.56 0.44
 
 bin_009_Firmicutes 0.51 0.49
 
 bin_030_Verrucomicrobia 0.57 0.43
 
 bin_051 0.50 0.50
 
 bin_003_Planctomycetes 0.54 0.46
 
 bin_075 0.52 0.48
 
 bin_058 0.45 0.55
 
 bin_031_Chloroflexi 0.51 0.49
 
 bin_016_Proteobacteria 0.56 0.44
 
 bin_049_Ignavibacteriae 0.43 0.57
 
 bin_020_Ignavibacteriae 0.49 0.51
 
 bin_010_Ignavibacteriae 0.55 0.45
 
 bin_037 0.50 0.50
 
 bin_067_Ignavibacteriae 0.41 0.59
 
 bin_006_Proteobacteria 0.48 0.52
 
 bin_086_Bacteroidetes 0.41 0.59
 
 bin_013_mixed 0.48 0.52
 
 bin_029_Proteobacteria 0.54 0.46
 
 bin_014_Proteobacteria 0.56 0.44
 
 bin_053 0.54 0.46
 
 bin_068_Proteobacteria 0.50 0.50
 
 bin_005_Chloroflexi 0.47 0.53
 
 bin_026_Chloroflexi 0.57 0.43
 
 bin_007_Acidobacteria 0.52 0.48
 
 bin_101_Chlorobi 0.26 0.74
 
 bin_059 0.31 0.69
 
 bin_050_Ignavibacteriae 0.37 0.63
 
 bin_090_Gemmatimonadetes 0.26 0.74
 
 bin_096_Actinobacteria 0.40 0.60
 
 bin_072 0.49 0.51
 
 bin_102 0.44 0.56
 
 bin_087_Proteobacteria 0.45 0.55
 
 bin_036_Proteobacteria 0.58 0.42
 
 bin_012_Verrucomicrobia 0.54 0.46
 
 bin_041_Chloroflexi 0.52 0.48
 
 bin_070_Ignavibacteriae 0.39 0.61
 
 bin_001_Chloroflexi 0.48 0.52
 
 bin_022_Armatimonadetes 0.54 0.46
 
 bin_018_Bacteroidetes 0.50 0.50
 
 bin_069_Bacteroidetes 0.48 0.52
 
 bin_060 0.57 0.43
 
 bin_071 0.49 0.51
 
 bin_035 0.55 0.45
 
 bin_025_Proteobacteria 0.52 0.48
 
 bin_092_Proteobacteria 0.45 0.55
 
 bin_039_Chloroflexi 0.53 0.47
 
 bin_091 0.48 0.52
 
 bin_019_Proteobacteria 0.56 0.44
 
 bin_066_Actinobacteria 0.52 0.48
 
 bin_034_Proteobacteria 0.52 0.48
 
 bin_084_Actinobacteria 0.58 0.42
 
 bin_095 0.45 0.55
 
 bin_042_Chloroflexi 0.51 0.49
 
 bin_076_Gemmatimonadetes 0.54 0.46
 
 bin_021 0.50 0.50
 
 bin_052 0.54 0.46
 
 bin_017 0.53 0.47
 
 bin_046_Ignavibacteriae 0.26 0.74
 
 bin_065 0.38 0.62
 
 bin_024 0.54 0.46
 
 bin_002_Unknown 0.47 0.53
 
 bin_109 0.43 0.57
 
 bin_082 0.40 0.60
 
 bin_033_Ignavibacteriae 0.53 0.47
 
 bin_027 0.46 0.54
 
 bin_103 0.43 0.57
 
 bin_057 0.39 0.61
 
 bin_028 0.55 0.45
 
 bin_079 0.51 0.49
 
 bin_081 0.41 0.59
 
 bin_077 0.48 0.52
 
 bin_083 0.47 0.53
 
 bin_089 0.50 0.50
 
 bin_111 0.38 0.62
 
 bin_106 0.39 0.61
 
 bin_074 0.48 0.52
 
 bin_100 0.39 0.61
 
 bin_094 0.44 0.56
 
 bin_080 0.48 0.52
 
 bin_043 0.39 0.61
 
 bin_093 0.45 0.55
 
 bin_105 0.43 0.57
 
 bin_110 0.43 0.57
 
 bin_061 0.39 0.61
 
 bin_108 0.42 0.58
 
 bin_085 0.53 0.47
 
 bin_107 0.41 0.59
 
 bin_054 0.53 0.47
 
 bin_099 0.45 0.55
 
 bin_008_Planctomycetes 0.51 0.49
 
 bin_104 0.43 0.57
 
 bin_088 0.45 0.55
 
 bin_097 0.47 0.53
 
 bin_044 0.38 0.62
 
 bin_098 0.43 0.57
 
 bin_055 0.54 0.46
 
 bin_073 0.51 0.49
 
 bin_078 0.37 0.63
 
 bin_021_rest 0.51 0.49
 
 bin_011 0.50 0.50
 
 bin_015 0.50 0.50

TAB-delimited matrix file for detection: bins_across_samples/detection.txt

Bin SAMPL ... SAMPL ...
 
 bin_000 0.93 1.00
 
 bin_063 0.97 1.00
 
 bin_038_Gemmatimonadetes 1.00 1.00
 
 bin_056_Proteobacteria 0.95 1.00
 
 bin_023_Proteobacteria 1.00 1.00
 
 bin_004_Proteobacteria 1.00 1.00
 
 bin_032_Bacteroidetes 1.00 1.00
 
 bin_064_Actinobacteria 0.99 1.00
 
 bin_045_Proteobacteria 1.00 1.00
 
 bin_062_Proteobacteria 1.00 1.00
 
 bin_048_Proteobacteria 0.99 1.00
 
 bin_047_Proteobacteria 0.99 1.00
 
 bin_009_Firmicutes 1.00 1.00
 
 bin_030_Verrucomicrobia 1.00 1.00
 
 bin_051 0.98 1.00
 
 bin_003_Planctomycetes 1.00 1.00
 
 bin_075 0.97 1.00
 
 bin_058 0.98 1.00
 
 bin_031_Chloroflexi 1.00 1.00
 
 bin_016_Proteobacteria 1.00 1.00
 
 bin_049_Ignavibacteriae 1.00 1.00
 
 bin_020_Ignavibacteriae 1.00 1.00
 
 bin_010_Ignavibacteriae 1.00 1.00
 
 bin_037 1.00 1.00
 
 bin_067_Ignavibacteriae 1.00 1.00
 
 bin_006_Proteobacteria 1.00 1.00
 
 bin_086_Bacteroidetes 0.98 1.00
 
 bin_013_mixed 1.00 1.00
 
 bin_029_Proteobacteria 1.00 1.00
 
 bin_014_Proteobacteria 1.00 1.00
 
 bin_053 0.99 1.00
 
 bin_068_Proteobacteria 0.99 1.00
 
 bin_005_Chloroflexi 1.00 1.00
 
 bin_026_Chloroflexi 1.00 1.00
 
 bin_007_Acidobacteria 1.00 1.00
 
 bin_101_Chlorobi 0.98 1.00
 
 bin_059 1.00 1.00
 
 bin_050_Ignavibacteriae 1.00 1.00
 
 bin_090_Gemmatimonadetes 0.99 1.00
 
 bin_096_Actinobacteria 0.95 1.00
 
 bin_072 0.99 1.00
 
 bin_102 0.92 1.00
 
 bin_087_Proteobacteria 0.98 1.00
 
 bin_036_Proteobacteria 1.00 1.00
 
 bin_012_Verrucomicrobia 1.00 1.00
 
 bin_041_Chloroflexi 1.00 1.00
 
 bin_070_Ignavibacteriae 1.00 1.00
 
 bin_001_Chloroflexi 1.00 1.00
 
 bin_022_Armatimonadetes 1.00 1.00
 
 bin_018_Bacteroidetes 1.00 1.00
 
 bin_069_Bacteroidetes 0.99 1.00
 
 bin_060 0.99 1.00
 
 bin_071 0.98 1.00
 
 bin_035 1.00 1.00
 
 bin_025_Proteobacteria 1.00 1.00
 
 bin_092_Proteobacteria 0.96 1.00
 
 bin_039_Chloroflexi 1.00 1.00
 
 bin_091 0.92 1.00
 
 bin_019_Proteobacteria 1.00 1.00
 
 bin_066_Actinobacteria 1.00 1.00
 
 bin_034_Proteobacteria 1.00 1.00
 
 bin_084_Actinobacteria 0.99 1.00
 
 bin_095 0.93 1.00
 
 bin_042_Chloroflexi 1.00 1.00
 
 bin_076_Gemmatimonadetes 0.99 1.00
 
 bin_021 1.00 1.00
 
 bin_052 1.00 1.00
 
 bin_017 1.00 1.00
 
 bin_046_Ignavibacteriae 1.00 1.00
 
 bin_065 0.82 1.00
 
 bin_024 1.00 1.00
 
 bin_002_Unknown 1.00 1.00
 
 bin_109 0.87 0.99
 
 bin_082 0.86 1.00
 
 bin_033_Ignavibacteriae 1.00 1.00
 
 bin_027 1.00 1.00
 
 bin_103 0.91 1.00
 
 bin_057 1.00 1.00
 
 bin_028 1.00 1.00
 
 bin_079 0.97 1.00
 
 bin_081 0.86 1.00
 
 bin_077 0.97 1.00
 
 bin_083 0.95 1.00
 
 bin_089 0.95 1.00
 
 bin_111 0.86 1.00
 
 bin_106 0.90 1.00
 
 bin_074 0.98 1.00
 
 bin_100 0.86 1.00
 
 bin_094 0.94 1.00
 
 bin_080 0.95 1.00
 
 bin_043 1.00 1.00
 
 bin_093 0.93 1.00
 
 bin_105 0.88 0.99
 
 bin_110 0.87 0.99
 
 bin_061 0.95 1.00
 
 bin_108 0.88 1.00
 
 bin_085 0.97 1.00
 
 bin_107 0.89 1.00
 
 bin_054 0.99 1.00
 
 bin_099 0.90 1.00
 
 bin_008_Planctomycetes 1.00 1.00
 
 bin_104 0.90 1.00
 
 bin_088 0.94 1.00
 
 bin_097 0.94 1.00
 
 bin_044 0.99 1.00
 
 bin_098 0.89 1.00
 
 bin_055 0.99 1.00
 
 bin_073 0.97 1.00
 
 bin_078 0.96 1.00
 
 bin_021_rest 1.00 1.00
 
 bin_011 1.00 1.00
 
 bin_015 1.00 1.00

TAB-delimited matrix file for abundance: bins_across_samples/abundance.txt

Bin SAMPL ... SAMPL ...
 
 bin_000 0.46 0.47
 
 bin_063 0.13 0.11
 
 bin_038_Gemmatimonadetes 0.31 0.25
 
 bin_056_Proteobacteria 0.12 0.10
 
 bin_023_Proteobacteria 0.93 0.96
 
 bin_004_Proteobacteria 5.85 5.43
 
 bin_032_Bacteroidetes 0.42 0.42
 
 bin_064_Actinobacteria 0.15 0.14
 
 bin_045_Proteobacteria 0.22 0.21
 
 bin_062_Proteobacteria 0.17 0.14
 
 bin_048_Proteobacteria 0.20 0.16
 
 bin_047_Proteobacteria 0.21 0.16
 
 bin_009_Firmicutes 4.03 3.92
 
 bin_030_Verrucomicrobia 0.50 0.38
 
 bin_051 0.16 0.15
 
 bin_003_Planctomycetes 10.19 8.56
 
 bin_075 0.11 0.09
 
 bin_058 0.26 0.29
 
 bin_031_Chloroflexi 0.43 0.41
 
 bin_016_Proteobacteria 1.67 1.31
 
 bin_049_Ignavibacteriae 0.23 0.30
 
 bin_020_Ignavibacteriae 1.17 1.22
 
 bin_010_Ignavibacteriae 3.18 2.61
 
 bin_037 0.33 0.34
 
 bin_067_Ignavibacteriae 0.15 0.21
 
 bin_006_Proteobacteria 4.62 4.92
 
 bin_086_Bacteroidetes 0.09 0.13
 
 bin_013_mixed 1.92 2.06
 
 bin_029_Proteobacteria 0.58 0.50
 
 bin_014_Proteobacteria 1.89 1.48
 
 bin_053 0.19 0.17
 
 bin_068_Proteobacteria 0.14 0.14
 
 bin_005_Chloroflexi 5.80 6.49
 
 bin_026_Chloroflexi 0.83 0.62
 
 bin_007_Acidobacteria 4.39 4.07
 
 bin_101_Chlorobi 0.07 0.21
 
 bin_059 0.17 0.38
 
 bin_050_Ignavibacteriae 0.20 0.33
 
 bin_090_Gemmatimonadetes 0.08 0.23
 
 bin_096_Actinobacteria 0.07 0.10
 
 bin_072 0.13 0.13
 
 bin_102 0.06 0.07
 
 bin_087_Proteobacteria 0.09 0.12
 
 bin_036_Proteobacteria 0.33 0.24
 
 bin_012_Verrucomicrobia 2.06 1.77
 
 bin_041_Chloroflexi 0.28 0.25
 
 bin_070_Ignavibacteriae 0.14 0.22
 
 bin_001_Chloroflexi 31.47 33.64
 
 bin_022_Armatimonadetes 1.09 0.94
 
 bin_018_Bacteroidetes 1.39 1.37
 
 bin_069_Bacteroidetes 0.13 0.13
 
 bin_060 0.17 0.13
 
 bin_071 0.14 0.14
 
 bin_035 0.33 0.27
 
 bin_025_Proteobacteria 0.90 0.83
 
 bin_092_Proteobacteria 0.07 0.09
 
 bin_039_Chloroflexi 0.29 0.25
 
 bin_091 0.07 0.07
 
 bin_019_Proteobacteria 1.37 1.11
 
 bin_066_Actinobacteria 0.18 0.17
 
 bin_034_Proteobacteria 0.36 0.32
 
 bin_084_Actinobacteria 0.16 0.12
 
 bin_095 0.07 0.08
 
 bin_042_Chloroflexi 0.25 0.24
 
 bin_076_Gemmatimonadetes 0.13 0.11
 
 bin_021 1.11 1.11
 
 bin_052 0.20 0.17
 
 bin_017 1.41 1.22
 
 bin_046_Ignavibacteriae 0.21 0.61
 
 bin_065 0.16 0.18
 
 bin_024 0.93 0.80
 
 bin_002_Unknown 19.04 21.81
 
 bin_109 0.05 0.06
 
 bin_082 0.08 0.09
 
 bin_033_Ignavibacteriae 0.41 0.36
 
 bin_027 0.64 0.75
 
 bin_103 0.06 0.07
 
 bin_057 0.28 0.41
 
 bin_028 0.64 0.53
 
 bin_079 0.11 0.10
 
 bin_081 0.07 0.08
 
 bin_077 0.10 0.11
 
 bin_083 0.09 0.10
 
 bin_089 0.11 0.10
 
 bin_111 0.04 0.07
 
 bin_106 0.05 0.08
 
 bin_074 0.11 0.11
 
 bin_100 0.06 0.07
 
 bin_094 0.07 0.09
 
 bin_080 0.11 0.10
 
 bin_043 0.27 0.41
 
 bin_093 0.07 0.08
 
 bin_105 0.05 0.06
 
 bin_110 0.05 0.06
 
 bin_061 0.20 0.27
 
 bin_108 0.05 0.06
 
 bin_085 0.10 0.09
 
 bin_107 0.05 0.07
 
 bin_054 0.19 0.17
 
 bin_099 0.06 0.07
 
 bin_008_Planctomycetes 4.05 3.96
 
 bin_104 0.06 0.07
 
 bin_088 0.07 0.08
 
 bin_097 0.07 0.07
 
 bin_044 0.22 0.35
 
 bin_098 0.06 0.07
 
 bin_055 0.18 0.15
 
 bin_073 0.13 0.12
 
 bin_078 0.17 0.25
 
 bin_021_rest 1.14 1.10
 
 bin_011 2.88 2.96
 
 bin_015 2.12 2.17

TAB-delimited matrix file for variability: bins_across_samples/variability.txt

Bin SAMPL ... SAMPL ...
 
 bin_000 2.00 2.22
 
 bin_063 3.72 2.65
 
 bin_038_Gemmatimonadetes 0.01 0.02
 
 bin_056_Proteobacteria 0.05 0.06
 
 bin_023_Proteobacteria 2.46 7.88
 
 bin_004_Proteobacteria 0.88 0.83
 
 bin_032_Bacteroidetes 2.53 2.73
 
 bin_064_Actinobacteria 1.51 1.59
 
 bin_045_Proteobacteria 6.33 6.08
 
 bin_062_Proteobacteria 0.43 0.42
 
 bin_048_Proteobacteria 4.13 3.75
 
 bin_047_Proteobacteria 0.54 0.64
 
 bin_009_Firmicutes 1.95 1.97
 
 bin_030_Verrucomicrobia 0.21 0.21
 
 bin_051 3.31 3.41
 
 bin_003_Planctomycetes 4.63 4.60
 
 bin_075 0.36 0.33
 
 bin_058 1.50 1.69
 
 bin_031_Chloroflexi 0.25 0.27
 
 bin_016_Proteobacteria 2.01 1.99
 
 bin_049_Ignavibacteriae 2.74 4.79
 
 bin_020_Ignavibacteriae 2.48 2.53
 
 bin_010_Ignavibacteriae 12.18 11.79
 
 bin_037 6.59 7.23
 
 bin_067_Ignavibacteriae 0.84 2.74
 
 bin_006_Proteobacteria 7.99 8.88
 
 bin_086_Bacteroidetes 0.07 0.13
 
 bin_013_mixed 1.38 1.26
 
 bin_029_Proteobacteria 5.64 8.14
 
 bin_014_Proteobacteria 1.52 1.51
 
 bin_053 4.17 4.02
 
 bin_068_Proteobacteria 3.08 3.33
 
 bin_005_Chloroflexi 1.95 1.96
 
 bin_026_Chloroflexi 1.12 0.89
 
 bin_007_Acidobacteria 0.57 0.57
 
 bin_101_Chlorobi 0.06 0.79
 
 bin_059 0.04 0.08
 
 bin_050_Ignavibacteriae 2.83 5.80
 
 bin_090_Gemmatimonadetes 0.01 0.01
 
 bin_096_Actinobacteria 0.10 0.91
 
 bin_072 1.47 1.66
 
 bin_102 0.07 0.08
 
 bin_087_Proteobacteria 0.29 0.38
 
 bin_036_Proteobacteria 0.33 0.43
 
 bin_012_Verrucomicrobia 0.83 0.82
 
 bin_041_Chloroflexi 2.26 2.57
 
 bin_070_Ignavibacteriae 0.27 1.04
 
 bin_001_Chloroflexi 4.18 4.18
 
 bin_022_Armatimonadetes 0.36 0.36
 
 bin_018_Bacteroidetes 0.89 0.94
 
 bin_069_Bacteroidetes 0.58 0.66
 
 bin_060 1.44 1.29
 
 bin_071 2.65 2.37
 
 bin_035 2.58 2.20
 
 bin_025_Proteobacteria 0.75 0.89
 
 bin_092_Proteobacteria 0.14 0.20
 
 bin_039_Chloroflexi 0.97 5.16
 
 bin_091 0.02 0.03
 
 bin_019_Proteobacteria 5.99 7.08
 
 bin_066_Actinobacteria 3.00 3.29
 
 bin_034_Proteobacteria 6.65 7.00
 
 bin_084_Actinobacteria 2.21 1.25
 
 bin_095 0.16 0.27
 
 bin_042_Chloroflexi 0.34 0.55
 
 bin_076_Gemmatimonadetes 0.01 0.04
 
 bin_021 1.31 1.41
 
 bin_052 1.91 2.06
 
 bin_017 21.55 21.61
 
 bin_046_Ignavibacteriae 0.10 0.28
 
 bin_065 0.27 0.39
 
 bin_024 10.90 16.42
 
 bin_002_Unknown 3.18 3.15
 
 bin_109 0.09 0.13
 
 bin_082 0.39 0.32
 
 bin_033_Ignavibacteriae 0.11 0.11
 
 bin_027 11.98 17.21
 
 bin_103 0.04 0.07
 
 bin_057 19.57 23.33
 
 bin_028 8.07 8.83
 
 bin_079 4.82 3.78
 
 bin_081 0.05 0.08
 
 bin_077 0.73 0.67
 
 bin_083 1.07 0.85
 
 bin_089 0.07 0.06
 
 bin_111 0.07 0.22
 
 bin_106 0.09 1.15
 
 bin_074 1.65 1.72
 
 bin_100 0.62 0.62
 
 bin_094 0.02 0.02
 
 bin_080 4.34 4.31
 
 bin_043 3.39 4.51
 
 bin_093 1.04 1.41
 
 bin_105 0.09 0.13
 
 bin_110 0.04 0.03
 
 bin_061 5.68 7.21
 
 bin_108 0.09 0.12
 
 bin_085 0.08 0.07
 
 bin_107 0.11 0.11
 
 bin_054 5.24 4.71
 
 bin_099 0.11 0.13
 
 bin_008_Planctomycetes 1.70 1.61
 
 bin_104 0.29 0.39
 
 bin_088 0.45 0.53
 
 bin_097 0.15 0.17
 
 bin_044 0.99 1.49
 
 bin_098 0.48 0.59
 
 bin_055 3.06 2.87
 
 bin_073 8.32 7.71
 
 bin_078 14.91 18.89
 
 bin_021_rest 2.44 2.71
 
 bin_011 9.56 10.17
 
 bin_015 20.51 20.59

Percent Recruitment

This panel shows how much of the mapped data is recruited by each bin (and how much of the mapped data was not binned under 'splits_not_binned' column). The way these percents calculated is quite simple: summarize the mean coverage of each split in each bin, and normalize every bin with respect to each other. It is critical to remember that these values do not take the unasssambled data into account. This is how you should read this table: "X percent of all mapped reads in Sample Y mapped to splits that were binned into bin Z".

TAB-delimited matrix file for percent recruitment: bins_across_samples/bins_percent_recruitment.txt

Sample __splits_not_binned__ bin_000 bin_001_Chloroflexi bin_002_Unknown bin_003_Planctomycetes bin_004_Proteobacteria bin_005_Chloroflexi bin_006_Proteobacteria bin_007_Acidobacteria bin_008_Planctomycetes bin_009_Firmicutes bin_010_Ignavibacteriae bin_011 bin_012_Verrucomicrobia bin_013_mixed bin_014_Proteobacteria bin_015 bin_016_Proteobacteria bin_017 bin_018_Bacteroidetes bin_019_Proteobacteria bin_020_Ignavibacteriae bin_021 bin_021_rest bin_022_Armatimonadetes bin_023_Proteobacteria bin_024 bin_025_Proteobacteria bin_026_Chloroflexi bin_027 bin_028 bin_029_Proteobacteria bin_030_Verrucomicrobia bin_031_Chloroflexi bin_032_Bacteroidetes bin_033_Ignavibacteriae bin_034_Proteobacteria bin_035 bin_036_Proteobacteria bin_037 bin_038_Gemmatimonadetes bin_039_Chloroflexi bin_041_Chloroflexi bin_042_Chloroflexi bin_043 bin_044 bin_045_Proteobacteria bin_046_Ignavibacteriae bin_047_Proteobacteria bin_048_Proteobacteria bin_049_Ignavibacteriae bin_050_Ignavibacteriae bin_051 bin_052 bin_053 bin_054 bin_055 bin_056_Proteobacteria bin_057 bin_058 bin_059 bin_060 bin_061 bin_062_Proteobacteria bin_063 bin_064_Actinobacteria bin_065 bin_066_Actinobacteria bin_067_Ignavibacteriae bin_068_Proteobacteria bin_069_Bacteroidetes bin_070_Ignavibacteriae bin_071 bin_072 bin_073 bin_074 bin_075 bin_076_Gemmatimonadetes bin_077 bin_078 bin_079 bin_080 bin_081 bin_082 bin_083 bin_084_Actinobacteria bin_085 bin_086_Bacteroidetes bin_087_Proteobacteria bin_088 bin_089 bin_090_Gemmatimonadetes bin_091 bin_092_Proteobacteria bin_093 bin_094 bin_095 bin_096_Actinobacteria bin_097 bin_098 bin_099 bin_100 bin_101_Chlorobi bin_102 bin_103 bin_104 bin_105 bin_106 bin_107 bin_108 bin_109 bin_110 bin_111
SAMPLE_BIOF3_01 0.00% 19.96% 14.86% 4.81% 6.80% 2.95% 2.76% 2.36% 1.91% 0.68% 2.41% 2.66% 0.20% 1.19% 0.80% 1.96% 0.20% 1.00% 2.33% 0.60% 0.89% 0.56% 0.44% 0.16% 0.45% 0.77% 1.14% 0.44% 0.39% 1.39% 2.01% 0.33% 0.27% 0.28% 0.23% 0.15% 0.27% 0.20% 0.20% 0.52% 0.21% 0.14% 0.19% 0.11% 0.23% 0.26% 0.25% 0.07% 0.13% 0.21% 0.19% 0.12% 0.38% 0.10% 0.23% 0.15% 0.19% 0.18% 0.27% 0.22% 0.07% 0.51% 0.20% 0.12% 0.59% 0.12% 0.92% 0.14% 0.13% 0.19% 0.07% 0.07% 0.28% 0.26% 0.47% 0.17% 0.43% 0.10% 0.19% 0.37% 0.63% 0.36% 0.23% 0.28% 0.26% 0.12% 0.29% 0.04% 0.26% 0.19% 0.48% 0.03% 0.49% 0.19% 0.20% 0.27% 0.41% 0.09% 0.27% 0.23% 0.58% 0.19% 0.03% 0.40% 0.33% 0.18% 0.32% 0.24% 0.17% 0.40% 0.61% 0.21% 0.27%
SAMPLE_BIOF4_02 0.00% 20.08% 15.82% 5.48% 5.69% 2.73% 3.07% 2.50% 1.76% 0.66% 2.33% 2.17% 0.21% 1.02% 0.85% 1.53% 0.20% 0.78% 2.02% 0.59% 0.72% 0.59% 0.44% 0.15% 0.39% 0.79% 0.98% 0.41% 0.29% 1.62% 1.66% 0.28% 0.20% 0.26% 0.22% 0.13% 0.24% 0.16% 0.14% 0.52% 0.17% 0.12% 0.18% 0.10% 0.36% 0.42% 0.23% 0.20% 0.10% 0.17% 0.25% 0.20% 0.35% 0.09% 0.20% 0.13% 0.17% 0.15% 0.38% 0.26% 0.16% 0.38% 0.27% 0.11% 0.50% 0.11% 1.00% 0.13% 0.18% 0.19% 0.07% 0.10% 0.28% 0.27% 0.43% 0.17% 0.37% 0.08% 0.20% 0.53% 0.56% 0.35% 0.26% 0.32% 0.28% 0.09% 0.25% 0.06% 0.31% 0.22% 0.47% 0.08% 0.49% 0.23% 0.23% 0.33% 0.47% 0.13% 0.28% 0.27% 0.64% 0.25% 0.09% 0.47% 0.40% 0.22% 0.39% 0.36% 0.22% 0.50% 0.73% 0.25% 0.39%

Gene calls (their functions, coverage and detection across samples, etc)

An overview of genes and functions based on the information found in the contigs database. If you haven't assigned any functions, these tables will only contain coverages of ORFs across samples.

Bin Total Size Num Genes Identified Tabular data
 
 bin_000 64,811 🔗 genes | gene_coverages | detection
 
 bin_063 7,541 🔗 genes | gene_coverages | detection
 
 bin_038_Gemmatimonadetes 4,528 🔗 genes | gene_coverages | detection
 
 bin_056_Proteobacteria 5,425 🔗 genes | gene_coverages | detection
 
 bin_023_Proteobacteria 4,556 🔗 genes | gene_coverages | detection
 
 bin_004_Proteobacteria 3,757 🔗 genes | gene_coverages | detection
 
 bin_032_Bacteroidetes 2,799 🔗 genes | gene_coverages | detection
 
 bin_064_Actinobacteria 3,118 🔗 genes | gene_coverages | detection
 
 bin_045_Proteobacteria 5,152 🔗 genes | gene_coverages | detection
 
 bin_062_Proteobacteria 4,859 🔗 genes | gene_coverages | detection
 
 bin_048_Proteobacteria 4,401 🔗 genes | gene_coverages | detection
 
 bin_047_Proteobacteria 4,020 🔗 genes | gene_coverages | detection
 
 bin_009_Firmicutes 4,074 🔗 genes | gene_coverages | detection
 
 bin_030_Verrucomicrobia 3,338 🔗 genes | gene_coverages | detection
 
 bin_051 4,785 🔗 genes | gene_coverages | detection
 
 bin_003_Planctomycetes 3,563 🔗 genes | gene_coverages | detection
 
 bin_075 7,145 🔗 genes | gene_coverages | detection
 
 bin_058 4,089 🔗 genes | gene_coverages | detection
 
 bin_031_Chloroflexi 4,325 🔗 genes | gene_coverages | detection
 
 bin_016_Proteobacteria 3,932 🔗 genes | gene_coverages | detection
 
 bin_049_Ignavibacteriae 3,594 🔗 genes | gene_coverages | detection
 
 bin_020_Ignavibacteriae 2,985 🔗 genes | gene_coverages | detection
 
 bin_010_Ignavibacteriae 3,518 🔗 genes | gene_coverages | detection
 
 bin_037 3,963 🔗 genes | gene_coverages | detection
 
 bin_067_Ignavibacteriae 3,107 🔗 genes | gene_coverages | detection
 
 bin_006_Proteobacteria 3,376 🔗 genes | gene_coverages | detection
 
 bin_086_Bacteroidetes 2,752 🔗 genes | gene_coverages | detection
 
 bin_013_mixed 2,467 🔗 genes | gene_coverages | detection
 
 bin_029_Proteobacteria 2,678 🔗 genes | gene_coverages | detection
 
 bin_014_Proteobacteria 7,240 🔗 genes | gene_coverages | detection
 
 bin_053 5,423 🔗 genes | gene_coverages | detection
 
 bin_068_Proteobacteria 4,417 🔗 genes | gene_coverages | detection
 
 bin_005_Chloroflexi 3,597 🔗 genes | gene_coverages | detection
 
 bin_026_Chloroflexi 3,158 🔗 genes | gene_coverages | detection
 
 bin_007_Acidobacteria 3,059 🔗 genes | gene_coverages | detection
 
 bin_101_Chlorobi 2,808 🔗 genes | gene_coverages | detection
 
 bin_059 2,699 🔗 genes | gene_coverages | detection
 
 bin_050_Ignavibacteriae 2,594 🔗 genes | gene_coverages | detection
 
 bin_090_Gemmatimonadetes 2,324 🔗 genes | gene_coverages | detection
 
 bin_096_Actinobacteria 2,322 🔗 genes | gene_coverages | detection
 
 bin_072 7,704 🔗 genes | gene_coverages | detection
 
 bin_102 7,980 🔗 genes | gene_coverages | detection
 
 bin_087_Proteobacteria 5,872 🔗 genes | gene_coverages | detection
 
 bin_036_Proteobacteria 4,401 🔗 genes | gene_coverages | detection
 
 bin_012_Verrucomicrobia 3,701 🔗 genes | gene_coverages | detection
 
 bin_041_Chloroflexi 3,909 🔗 genes | gene_coverages | detection
 
 bin_070_Ignavibacteriae 3,037 🔗 genes | gene_coverages | detection
 
 bin_001_Chloroflexi 3,344 🔗 genes | gene_coverages | detection
 
 bin_022_Armatimonadetes 2,897 🔗 genes | gene_coverages | detection
 
 bin_018_Bacteroidetes 2,715 🔗 genes | gene_coverages | detection
 
 bin_069_Bacteroidetes 2,642 🔗 genes | gene_coverages | detection
 
 bin_060 8,654 🔗 genes | gene_coverages | detection
 
 bin_071 5,784 🔗 genes | gene_coverages | detection
 
 bin_035 3,505 🔗 genes | gene_coverages | detection
 
 bin_025_Proteobacteria 3,505 🔗 genes | gene_coverages | detection
 
 bin_092_Proteobacteria 3,737 🔗 genes | gene_coverages | detection
 
 bin_039_Chloroflexi 2,694 🔗 genes | gene_coverages | detection
 
 bin_091 7,765 🔗 genes | gene_coverages | detection
 
 bin_019_Proteobacteria 4,052 🔗 genes | gene_coverages | detection
 
 bin_066_Actinobacteria 2,965 🔗 genes | gene_coverages | detection
 
 bin_034_Proteobacteria 2,573 🔗 genes | gene_coverages | detection
 
 bin_084_Actinobacteria 2,377 🔗 genes | gene_coverages | detection
 
 bin_095 6,751 🔗 genes | gene_coverages | detection
 
 bin_042_Chloroflexi 3,190 🔗 genes | gene_coverages | detection
 
 bin_076_Gemmatimonadetes 2,104 🔗 genes | gene_coverages | detection
 
 bin_021 2,548 🔗 genes | gene_coverages | detection
 
 bin_052 3,354 🔗 genes | gene_coverages | detection
 
 bin_017 2,947 🔗 genes | gene_coverages | detection
 
 bin_046_Ignavibacteriae 2,164 🔗 genes | gene_coverages | detection
 
 bin_065 7,849 🔗 genes | gene_coverages | detection
 
 bin_024 3,671 🔗 genes | gene_coverages | detection
 
 bin_002_Unknown 1,702 🔗 genes | gene_coverages | detection
 
 bin_109 10,890 🔗 genes | gene_coverages | detection
 
 bin_082 6,304 🔗 genes | gene_coverages | detection
 
 bin_033_Ignavibacteriae 2,375 🔗 genes | gene_coverages | detection
 
 bin_027 2,950 🔗 genes | gene_coverages | detection
 
 bin_103 5,059 🔗 genes | gene_coverages | detection
 
 bin_057 2,843 🔗 genes | gene_coverages | detection
 
 bin_028 7,180 🔗 genes | gene_coverages | detection
 
 bin_079 7,241 🔗 genes | gene_coverages | detection
 
 bin_081 5,984 🔗 genes | gene_coverages | detection
 
 bin_077 4,513 🔗 genes | gene_coverages | detection
 
 bin_083 5,810 🔗 genes | gene_coverages | detection
 
 bin_089 4,322 🔗 genes | gene_coverages | detection
 
 bin_111 5,132 🔗 genes | gene_coverages | detection
 
 bin_106 3,901 🔗 genes | gene_coverages | detection
 
 bin_074 4,095 🔗 genes | gene_coverages | detection
 
 bin_100 3,545 🔗 genes | gene_coverages | detection
 
 bin_094 6,118 🔗 genes | gene_coverages | detection
 
 bin_080 4,030 🔗 genes | gene_coverages | detection
 
 bin_043 2,989 🔗 genes | gene_coverages | detection
 
 bin_093 3,124 🔗 genes | gene_coverages | detection
 
 bin_105 5,246 🔗 genes | gene_coverages | detection
 
 bin_110 3,782 🔗 genes | gene_coverages | detection
 
 bin_061 1,976 🔗 genes | gene_coverages | detection
 
 bin_108 6,652 🔗 genes | gene_coverages | detection
 
 bin_085 3,798 🔗 genes | gene_coverages | detection
 
 bin_107 2,823 🔗 genes | gene_coverages | detection
 
 bin_054 2,884 🔗 genes | gene_coverages | detection
 
 bin_099 8,725 🔗 genes | gene_coverages | detection
 
 bin_008_Planctomycetes 1,138 🔗 genes | gene_coverages | detection
 
 bin_104 3,143 🔗 genes | gene_coverages | detection
 
 bin_088 3,216 🔗 genes | gene_coverages | detection
 
 bin_097 3,791 🔗 genes | gene_coverages | detection
 
 bin_044 4,126 🔗 genes | gene_coverages | detection
 
 bin_098 4,010 🔗 genes | gene_coverages | detection
 
 bin_055 3,335 🔗 genes | gene_coverages | detection
 
 bin_073 3,553 🔗 genes | gene_coverages | detection
 
 bin_078 3,168 🔗 genes | gene_coverages | detection
 
 bin_021_rest 746 🔗 genes | gene_coverages | detection
 
 bin_011 251 🔗 genes | gene_coverages | detection
 
 bin_015 261 🔗 genes | gene_coverages | detection

Hits for non-single-copy gene HMM profiles

This panel shows you the result of non-single copy gene hits in your bins and contigs for each HMM profile. Here is a table that shows the total number of HMM hits in each bin for each HMM search type (from bins_across_samples/hmm_hit_totals.txt):

Bin Ribosomal_RNAs
 
 bin_000 66
 
 bin_063 None
 
 bin_038_Gemmatimonadetes None
 
 bin_056_Proteobacteria None
 
 bin_023_Proteobacteria None
 
 bin_004_Proteobacteria 1
 
 bin_032_Bacteroidetes 3
 
 bin_064_Actinobacteria None
 
 bin_045_Proteobacteria None
 
 bin_062_Proteobacteria 1
 
 bin_048_Proteobacteria None
 
 bin_047_Proteobacteria None
 
 bin_009_Firmicutes 1
 
 bin_030_Verrucomicrobia None
 
 bin_051 None
 
 bin_003_Planctomycetes 2
 
 bin_075 None
 
 bin_058 None
 
 bin_031_Chloroflexi None
 
 bin_016_Proteobacteria None
 
 bin_049_Ignavibacteriae None
 
 bin_020_Ignavibacteriae None
 
 bin_010_Ignavibacteriae 1
 
 bin_037 2
 
 bin_067_Ignavibacteriae None
 
 bin_006_Proteobacteria None
 
 bin_086_Bacteroidetes 2
 
 bin_013_mixed 2
 
 bin_029_Proteobacteria None
 
 bin_014_Proteobacteria None
 
 bin_053 None
 
 bin_068_Proteobacteria None
 
 bin_005_Chloroflexi 2
 
 bin_026_Chloroflexi 2
 
 bin_007_Acidobacteria 2
 
 bin_101_Chlorobi 1
 
 bin_059 2
 
 bin_050_Ignavibacteriae None
 
 bin_090_Gemmatimonadetes None
 
 bin_096_Actinobacteria None
 
 bin_072 1
 
 bin_102 None
 
 bin_087_Proteobacteria None
 
 bin_036_Proteobacteria None
 
 bin_012_Verrucomicrobia 1
 
 bin_041_Chloroflexi None
 
 bin_070_Ignavibacteriae None
 
 bin_001_Chloroflexi 1
 
 bin_022_Armatimonadetes 2
 
 bin_018_Bacteroidetes 2
 
 bin_069_Bacteroidetes 1
 
 bin_060 5
 
 bin_071 1
 
 bin_035 None
 
 bin_025_Proteobacteria None
 
 bin_092_Proteobacteria None
 
 bin_039_Chloroflexi 1
 
 bin_091 2
 
 bin_019_Proteobacteria None
 
 bin_066_Actinobacteria None
 
 bin_034_Proteobacteria None
 
 bin_084_Actinobacteria None
 
 bin_095 1
 
 bin_042_Chloroflexi None
 
 bin_076_Gemmatimonadetes None
 
 bin_021 None
 
 bin_052 None
 
 bin_017 None
 
 bin_046_Ignavibacteriae 1
 
 bin_065 14
 
 bin_024 None
 
 bin_002_Unknown 2
 
 bin_109 1
 
 bin_082 None
 
 bin_033_Ignavibacteriae None
 
 bin_027 2
 
 bin_103 None
 
 bin_057 None
 
 bin_028 None
 
 bin_079 None
 
 bin_081 1
 
 bin_077 None
 
 bin_083 None
 
 bin_089 None
 
 bin_111 None
 
 bin_106 None
 
 bin_074 None
 
 bin_100 None
 
 bin_094 None
 
 bin_080 None
 
 bin_043 2
 
 bin_093 None
 
 bin_105 None
 
 bin_110 None
 
 bin_061 None
 
 bin_108 None
 
 bin_085 None
 
 bin_107 None
 
 bin_054 None
 
 bin_099 None
 
 bin_008_Planctomycetes None
 
 bin_104 None
 
 bin_088 None
 
 bin_097 None
 
 bin_044 None
 
 bin_098 3
 
 bin_055 None
 
 bin_073 None
 
 bin_078 1
 
 bin_021_rest 3
 
 bin_011 None
 
 bin_015 8

The distribution of each HMM item found in your HMM collections is shown below. Different search types will be presented in their cognate tabs.

HMM hits in bins for Ribosomal_RNAs (from bins_across_samples/hmms_Ribosomal_RNAs.txt):

Bin Archa ... Archa ... Archa ... Archa ... Bacte ... Bacte ... Bacte ... Eukar ... Eukar ... Eukar ... ...
 
 bin_000 4 24 None None 11 26 None 1 None None ...
 
 bin_063 None None None None None None None None None None ...
 
 bin_038_Gemmatimonadetes None None None None None None None None None None ...
 
 bin_056_Proteobacteria None None None None None None None None None None ...
 
 bin_023_Proteobacteria None None None None None None None None None None ...
 
 bin_004_Proteobacteria None None None None None 1 None None None None ...
 
 bin_032_Bacteroidetes None 1 None None 1 1 None None None None ...
 
 bin_064_Actinobacteria None None None None None None None None None None ...
 
 bin_045_Proteobacteria None None None None None None None None None None ...
 
 bin_062_Proteobacteria None None None None None 1 None None None None ...
 
 bin_048_Proteobacteria None None None None None None None None None None ...
 
 bin_047_Proteobacteria None None None None None None None None None None ...
 
 bin_009_Firmicutes None None None None 1 None None None None None ...
 
 bin_030_Verrucomicrobia None None None None None None None None None None ...
 
 bin_051 None None None None None None None None None None ...
 
 bin_003_Planctomycetes 1 1 None None None None None None None None ...
 
 bin_075 None None None None None None None None None None ...
 
 bin_058 None None None None None None None None None None ...
 
 bin_031_Chloroflexi None None None None None None None None None None ...
 
 bin_016_Proteobacteria None None None None None None None None None None ...
 
 bin_049_Ignavibacteriae None None None None None None None None None None ...
 
 bin_020_Ignavibacteriae None None None None None None None None None None ...
 
 bin_010_Ignavibacteriae None None None None None 1 None None None None ...
 
 bin_037 1 1 None None None None None None None None ...
 
 bin_067_Ignavibacteriae None None None None None None None None None None ...
 
 bin_006_Proteobacteria None None None None None None None None None None ...
 
 bin_086_Bacteroidetes None 1 None None 1 None None None None None ...
 
 bin_013_mixed 1 1 None None None None None None None None ...
 
 bin_029_Proteobacteria None None None None None None None None None None ...
 
 bin_014_Proteobacteria None None None None None None None None None None ...
 
 bin_053 None None None None None None None None None None ...
 
 bin_068_Proteobacteria None None None None None None None None None None ...
 
 bin_005_Chloroflexi None 1 None None 1 None None None None None ...
 
 bin_026_Chloroflexi None 1 None None 1 None None None None None ...
 
 bin_007_Acidobacteria None 1 None None 1 None None None None None ...
 
 bin_101_Chlorobi None None None None 1 None None None None None ...
 
 bin_059 1 1 None None None None None None None None ...
 
 bin_050_Ignavibacteriae None None None None None None None None None None ...
 
 bin_090_Gemmatimonadetes None None None None None None None None None None ...
 
 bin_096_Actinobacteria None None None None None None None None None None ...
 
 bin_072 None None None None None 1 None None None None ...
 
 bin_102 None None None None None None None None None None ...
 
 bin_087_Proteobacteria None None None None None None None None None None ...
 
 bin_036_Proteobacteria None None None None None None None None None None ...
 
 bin_012_Verrucomicrobia None None None None 1 None None None None None ...
 
 bin_041_Chloroflexi None None None None None None None None None None ...
 
 bin_070_Ignavibacteriae None None None None None None None None None None ...
 
 bin_001_Chloroflexi None 1 None None None None None None None None ...
 
 bin_022_Armatimonadetes None 1 None None 1 None None None None None ...
 
 bin_018_Bacteroidetes None 1 None None 1 None None None None None ...
 
 bin_069_Bacteroidetes None 1 None None None None None None None None ...
 
 bin_060 None None None None 2 3 None None None None ...
 
 bin_071 None None None None None 1 None None None None ...
 
 bin_035 None None None None None None None None None None ...
 
 bin_025_Proteobacteria None None None None None None None None None None ...
 
 bin_092_Proteobacteria None None None None None None None None None None ...
 
 bin_039_Chloroflexi 1 None None None None None None None None None ...
 
 bin_091 None None None None None None None 2 None None ...
 
 bin_019_Proteobacteria None None None None None None None None None None ...
 
 bin_066_Actinobacteria None None None None None None None None None None ...
 
 bin_034_Proteobacteria None None None None None None None None None None ...
 
 bin_084_Actinobacteria None None None None None None None None None None ...
 
 bin_095 None None None None None 1 None None None None ...
 
 bin_042_Chloroflexi None None None None None None None None None None ...
 
 bin_076_Gemmatimonadetes None None None None None None None None None None ...
 
 bin_021 None None None None None None None None None None ...
 
 bin_052 None None None None None None None None None None ...
 
 bin_017 None None None None None None None None None None ...
 
 bin_046_Ignavibacteriae None None None None 1 None None None None None ...
 
 bin_065 None 2 None None 5 4 None 3 None None ...
 
 bin_024 None None None None None None None None None None ...
 
 bin_002_Unknown None None None None 1 1 None None None None ...
 
 bin_109 None None None None None 1 None None None None ...
 
 bin_082 None None None None None None None None None None ...
 
 bin_033_Ignavibacteriae None None None None None None None None None None ...
 
 bin_027 None 1 None None None 1 None None None None ...
 
 bin_103 None None None None None None None None None None ...
 
 bin_057 None None None None None None None None None None ...
 
 bin_028 None None None None None None None None None None ...
 
 bin_079 None None None None None None None None None None ...
 
 bin_081 None None None None None 1 None None None None ...
 
 bin_077 None None None None None None None None None None ...
 
 bin_083 None None None None None None None None None None ...
 
 bin_089 None None None None None None None None None None ...
 
 bin_111 None None None None None None None None None None ...
 
 bin_106 None None None None None None None None None None ...
 
 bin_074 None None None None None None None None None None ...
 
 bin_100 None None None None None None None None None None ...
 
 bin_094 None None None None None None None None None None ...
 
 bin_080 None None None None None None None None None None ...
 
 bin_043 1 1 None None None None None None None None ...
 
 bin_093 None None None None None None None None None None ...
 
 bin_105 None None None None None None None None None None ...
 
 bin_110 None None None None None None None None None None ...
 
 bin_061 None None None None None None None None None None ...
 
 bin_108 None None None None None None None None None None ...
 
 bin_085 None None None None None None None None None None ...
 
 bin_107 None None None None None None None None None None ...
 
 bin_054 None None None None None None None None None None ...
 
 bin_099 None None None None None None None None None None ...
 
 bin_008_Planctomycetes None None None None None None None None None None ...
 
 bin_104 None None None None None None None None None None ...
 
 bin_088 None None None None None None None None None None ...
 
 bin_097 None None None None None None None None None None ...
 
 bin_044 None None None None None None None None None None ...
 
 bin_098 None None None None 1 2 None None None None ...
 
 bin_055 None None None None None None None None None None ...
 
 bin_073 None None None None None None None None None None ...
 
 bin_078 None 1 None None None None None None None None ...
 
 bin_021_rest None None None None 1 2 None None None None ...
 
 bin_011 None None None None None None None None None None ...
 
 bin_015 None None None None 3 5 None None None None ...

Misc Data

For layers

The directory misc data layers contains TAB-delimited files for additional data stored under the following data group names for each sample/layer found in the merged database: default.

The default data group, which often is added by anvi'o automatically and contains important information, contained these keys: num_SNVs_reported, total_reads_mapped.

For items

None found :(