Key | Value |
---|---|
Created on | 2020-02-12 18:36:37 |
Version | 31 |
Minimum contig length | 1,000 |
Number of contigs | 90,979 |
Number of splits | 97,297 |
Total nucleotides | 500.65 Mb |
SNVs profiled | 1 |
SCVs profiled | 0 |
Key | Value |
---|---|
Created on | 2020-02-12 18:36:37 |
Version | 14 |
Split length | 20,000 |
Number of contigs | 90,979 |
Number of splits | 97,297 |
Total nucleotides | 500.65 Mb |
K-mer size | 4 |
Genes are called | 1 |
Splits consider gene calls | 1 |
Gene function sources | COG_CATEGORY, COG_FUNCTION |
No description is provided
Summary of of each bin. You can download the information below also as a TAB-delimited file. Here is another TAB-delimited file that reports data for each single profile (such as number of reads mapped, etc).
Bin | Source | Taxonomy | Total Size | Num Contigs | N50 | GC Content | Compl. | Red. | SCG Domain | |
---|---|---|---|---|---|---|---|---|---|---|
bin_000 | UNKNOWN | 15,403 | 8,098 | 60.47% | 842.25% | bacteria | ||||
bin_063 | UNKNOWN | 1,647 | 6,194 | 74.93% | 38.03% | bacteria | ||||
bin_038_Gemmatimonadetes | UNKNOWN | 73 | 111,952 | 67.75% | 2.82% | bacteria | ||||
bin_056_Proteobacteria | UNKNOWN | 515 | 30,096 | 63.45% | 7.04% | bacteria | ||||
bin_023_Proteobacteria | UNKNOWN | 234 | 41,764 | 61.10% | 7.04% | bacteria | ||||
bin_004_Proteobacteria | UNKNOWN | 27 | 206,048 | 65.67% | 2.82% | bacteria | ||||
bin_032_Bacteroidetes | UNKNOWN | 100 | 101,615 | 36.55% | 0.00% | bacteria | ||||
bin_064_Actinobacteria | UNKNOWN | 281 | 22,637 | 67.43% | 1.41% | bacteria | ||||
bin_045_Proteobacteria | UNKNOWN | 324 | 49,748 | 62.30% | 36.62% | bacteria | ||||
bin_062_Proteobacteria | UNKNOWN | 178 | 48,554 | 55.90% | 1.41% | bacteria | ||||
bin_048_Proteobacteria | UNKNOWN | 322 | 36,850 | 61.17% | 0.00% | bacteria | ||||
bin_047_Proteobacteria | UNKNOWN | 111 | 83,634 | 61.42% | 5.63% | bacteria | ||||
bin_009_Firmicutes | UNKNOWN | 93 | 87,433 | 44.35% | 0.00% | bacteria | ||||
bin_030_Verrucomicrobia | UNKNOWN | 23 | 212,925 | 66.55% | 1.41% | bacteria | ||||
bin_051 | UNKNOWN | 870 | 8,436 | 70.83% | 38.03% | bacteria | ||||
bin_003_Planctomycetes | UNKNOWN | 208 | 30,344 | 40.77% | 12.68% | bacteria | ||||
bin_075 | UNKNOWN | 1,484 | 8,254 | 63.41% | 45.07% | bacteria | ||||
bin_058 | UNKNOWN | 184 | 83,902 | 46.87% | 1.41% | bacteria | ||||
bin_031_Chloroflexi | UNKNOWN | 51 | 149,493 | 59.49% | 1.41% | bacteria | ||||
bin_016_Proteobacteria | UNKNOWN | 81 | 178,727 | 62.81% | 5.63% | bacteria | ||||
bin_049_Ignavibacteriae | UNKNOWN | 253 | 42,236 | 35.87% | 1.41% | bacteria | ||||
bin_020_Ignavibacteriae | UNKNOWN | 59 | 107,749 | 40.58% | 1.41% | bacteria | ||||
bin_010_Ignavibacteriae | UNKNOWN | 287 | 23,711 | 33.34% | 1.41% | bacteria | ||||
bin_037 | UNKNOWN | 572 | 11,089 | 66.75% | 2.82% | bacteria | ||||
bin_067_Ignavibacteriae | UNKNOWN | 315 | 16,384 | 40.32% | 5.63% | bacteria | ||||
bin_006_Proteobacteria | UNKNOWN | 120 | 60,502 | 64.13% | 7.04% | bacteria | ||||
bin_086_Bacteroidetes | UNKNOWN | 117 | 42,493 | 39.11% | 1.41% | bacteria | ||||
bin_013_mixed | UNKNOWN | 28 | 331,130 | 58.98% | 0.00% | bacteria | ||||
bin_029_Proteobacteria | UNKNOWN | 179 | 30,579 | 68.65% | 8.45% | bacteria | ||||
bin_014_Proteobacteria | UNKNOWN | 148 | 81,157 | 69.94% | 0.00% | bacteria | ||||
bin_053 | UNKNOWN | 338 | 54,079 | 68.09% | 91.55% | bacteria | ||||
bin_068_Proteobacteria | UNKNOWN | 485 | 13,567 | 68.46% | 4.23% | bacteria | ||||
bin_005_Chloroflexi | UNKNOWN | 57 | 149,802 | 54.03% | 2.82% | bacteria | ||||
bin_026_Chloroflexi | UNKNOWN | 40 | 253,413 | 61.13% | 0.00% | bacteria | ||||
bin_007_Acidobacteria | UNKNOWN | 15 | 392,789 | 53.74% | 1.41% | bacteria | ||||
bin_101_Chlorobi | UNKNOWN | 60 | 74,637 | 35.73% | 0.00% | bacteria | ||||
bin_059 | UNKNOWN | 29 | 339,977 | 50.56% | 0.00% | bacteria | ||||
bin_050_Ignavibacteriae | UNKNOWN | 199 | 26,951 | 61.50% | 2.82% | bacteria | ||||
bin_090_Gemmatimonadetes | UNKNOWN | 21 | 170,057 | 67.04% | 0.00% | bacteria | ||||
bin_096_Actinobacteria | UNKNOWN | 468 | 6,710 | 65.84% | 4.23% | bacteria | ||||
bin_072 | UNKNOWN | 625 | 39,721 | 57.95% | 28.17% | bacteria | ||||
bin_102 | UNKNOWN | 2,482 | 3,593 | 59.17% | 50.70% | bacteria | ||||
bin_087_Proteobacteria | UNKNOWN | 994 | 9,481 | 69.31% | 14.08% | bacteria | ||||
bin_036_Proteobacteria | UNKNOWN | 75 | 136,744 | 70.10% | 4.23% | bacteria | ||||
bin_012_Verrucomicrobia | UNKNOWN | 78 | 79,543 | 62.51% | 2.82% | bacteria | ||||
bin_041_Chloroflexi | UNKNOWN | 227 | 28,430 | 63.52% | 1.41% | bacteria | ||||
bin_070_Ignavibacteriae | UNKNOWN | 94 | 55,493 | 55.04% | 1.41% | bacteria | ||||
bin_001_Chloroflexi | UNKNOWN | 60 | 121,528 | 59.27% | 1.41% | bacteria | ||||
bin_022_Armatimonadetes | UNKNOWN | 35 | 94,516 | 63.41% | 1.41% | bacteria | ||||
bin_018_Bacteroidetes | UNKNOWN | 19 | 283,578 | 32.96% | 1.41% | bacteria | ||||
bin_069_Bacteroidetes | UNKNOWN | 173 | 30,327 | 35.28% | 1.41% | bacteria | ||||
bin_060 | UNKNOWN | 1,032 | 18,963 | 60.53% | 22.54% | bacteria | ||||
bin_071 | UNKNOWN | 635 | 40,486 | 70.34% | 29.58% | bacteria | ||||
bin_035 | UNKNOWN | 144 | 57,260 | 56.22% | 0.00% | bacteria | ||||
bin_025_Proteobacteria | UNKNOWN | 64 | 109,280 | 70.77% | 0.00% | bacteria | ||||
bin_092_Proteobacteria | UNKNOWN | 955 | 3,959 | 69.89% | 5.63% | bacteria | ||||
bin_039_Chloroflexi | UNKNOWN | 173 | 23,317 | 71.08% | 2.82% | bacteria | ||||
bin_091 | UNKNOWN | 2,551 | 3,277 | 60.50% | 32.39% | bacteria | ||||
bin_019_Proteobacteria | UNKNOWN | 166 | 48,779 | 69.79% | 7.04% | bacteria | ||||
bin_066_Actinobacteria | UNKNOWN | 255 | 24,209 | 65.56% | 1.41% | bacteria | ||||
bin_034_Proteobacteria | UNKNOWN | 270 | 16,787 | 62.66% | 9.86% | bacteria | ||||
bin_084_Actinobacteria | UNKNOWN | 265 | 13,840 | 73.14% | 5.63% | bacteria | ||||
bin_095 | UNKNOWN | 2,301 | 3,349 | 62.18% | 64.79% | bacteria | ||||
bin_042_Chloroflexi | UNKNOWN | 72 | 60,132 | 68.40% | 2.82% | bacteria | ||||
bin_076_Gemmatimonadetes | UNKNOWN | 272 | 11,740 | 69.90% | 2.82% | bacteria | ||||
bin_021 | UNKNOWN | 56 | 54,077 | 59.94% | 0.00% | bacteria | ||||
bin_052 | UNKNOWN | 118 | 62,564 | 65.04% | 11.27% | bacteria | ||||
bin_017 | UNKNOWN | 610 | 6,114 | 69.99% | 4.23% | bacteria | ||||
bin_046_Ignavibacteriae | UNKNOWN | 20 | 101,247 | 46.99% | 0.00% | bacteria | ||||
bin_065 | UNKNOWN | 2,039 | 8,458 | 50.26% | 43.66% | bacteria | ||||
bin_024 | UNKNOWN | 445 | 13,239 | 67.68% | 7.04% | bacteria | ||||
bin_002_Unknown | UNKNOWN | 36 | 56,800 | 36.61% | 2.82% | bacteria | ||||
bin_109 | UNKNOWN | 4,519 | 1,768 | 57.44% | 76.06% | bacteria | ||||
bin_082 | UNKNOWN | 1,316 | 6,874 | 71.38% | 32.39% | bacteria | ||||
bin_033_Ignavibacteriae | UNKNOWN | 39 | 77,228 | 53.96% | 1.41% | bacteria | ||||
bin_027 | UNKNOWN | 797 | 3,858 | 66.45% | 14.08% | bacteria | ||||
bin_103 | UNKNOWN | 2,117 | 2,127 | 67.18% | 33.80% | bacteria | ||||
bin_057 | UNKNOWN | 341 | 13,652 | 66.00% | 4.23% | bacteria | ||||
bin_028 | UNKNOWN | 1,158 | 9,164 | 71.03% | 8.45% | bacteria | ||||
bin_079 | UNKNOWN | 2,118 | 3,367 | 72.49% | 26.76% | bacteria | ||||
bin_081 | UNKNOWN | 1,125 | 10,355 | 57.80% | 26.76% | bacteria | ||||
bin_077 | UNKNOWN | 672 | 15,886 | 67.63% | 25.35% | bacteria | ||||
bin_083 | UNKNOWN | 1,030 | 9,475 | 70.63% | 32.39% | bacteria | ||||
bin_089 | UNKNOWN | 1,664 | 2,337 | 63.32% | 21.13% | bacteria | ||||
bin_111 | UNKNOWN | 2,205 | 1,699 | 70.10% | 38.03% | bacteria | ||||
bin_106 | UNKNOWN | 1,644 | 1,889 | 61.53% | 8.45% | bacteria | ||||
bin_074 | UNKNOWN | 556 | 13,834 | 67.89% | 11.27% | bacteria | ||||
bin_100 | UNKNOWN | 1,278 | 2,398 | 66.79% | 57.75% | bacteria | ||||
bin_094 | UNKNOWN | 1,399 | 8,343 | 65.75% | 9.86% | bacteria | ||||
bin_080 | UNKNOWN | 1,245 | 2,943 | 62.78% | 43.66% | bacteria | ||||
bin_043 | UNKNOWN | 298 | 22,797 | 72.94% | 1.41% | bacteria | ||||
bin_093 | UNKNOWN | 1,032 | 2,622 | 65.26% | 50.70% | bacteria | ||||
bin_105 | UNKNOWN | 2,335 | 1,741 | 62.23% | 28.17% | bacteria | ||||
bin_110 | UNKNOWN | 1,655 | 1,546 | 54.49% | 14.08% | bacteria | ||||
bin_061 | UNKNOWN | 372 | 7,287 | 62.23% | 23.94% | bacteria | ||||
bin_108 | UNKNOWN | 2,986 | 1,576 | 65.74% | 18.31% | bacteria | ||||
bin_085 | UNKNOWN | 1,079 | 4,545 | 65.41% | 14.08% | bacteria | ||||
bin_107 | UNKNOWN | 1,202 | 1,818 | 73.40% | 2.82% | bacteria | ||||
bin_054 | UNKNOWN | 278 | 18,657 | 69.50% | 11.27% | bacteria | ||||
bin_099 | UNKNOWN | 3,497 | 2,130 | 63.52% | 11.27% | bacteria | ||||
bin_008_Planctomycetes | UNKNOWN | 26 | 26,585 | 62.65% | 0.00% | bacteria | ||||
bin_104 | UNKNOWN | 1,197 | 1,898 | 66.91% | 22.54% | bacteria | ||||
bin_088 | UNKNOWN | 976 | 2,995 | 69.82% | 9.86% | bacteria | ||||
bin_097 | UNKNOWN | 1,438 | 2,096 | 71.17% | 2.82% | bacteria | ||||
bin_044 | UNKNOWN | 420 | 20,074 | 76.37% | 1.41% | bacteria | ||||
bin_098 | UNKNOWN | 1,384 | 2,223 | 59.24% | 8.45% | bacteria | ||||
bin_055 | UNKNOWN | 403 | 14,004 | 70.78% | 11.27% | bacteria | ||||
bin_073 | UNKNOWN | 1,295 | 2,274 | 64.66% | 9.86% | bacteria | ||||
bin_078 | UNKNOWN | 777 | 4,822 | 67.84% | 4.23% | bacteria | ||||
bin_021_rest | UNKNOWN | 39 | 23,312 | 59.08% | 0.00% | blank | ||||
bin_011 | UNKNOWN | 19 | 65,316 | 59.63% | 0.00% | blank | ||||
bin_015 | UNKNOWN | 32 | 51,870 | 57.42% | 0.00% | blank |
TAB-delimited matrix file for std_coverage: bins_across_samples/std_coverage.txt
Bin | SAMPL ... | SAMPL ... | |
---|---|---|---|
bin_000 | 7.23 | 8.39 | |
bin_063 | 3.38 | 3.29 | |
bin_038_Gemmatimonadetes | 4.81 | 4.85 | |
bin_056_Proteobacteria | 2.81 | 2.77 | |
bin_023_Proteobacteria | 11.64 | 13.82 | |
bin_004_Proteobacteria | 32.23 | 35.99 | |
bin_032_Bacteroidetes | 6.90 | 7.82 | |
bin_064_Actinobacteria | 3.44 | 3.70 | |
bin_045_Proteobacteria | 5.05 | 5.71 | |
bin_062_Proteobacteria | 4.10 | 4.27 | |
bin_048_Proteobacteria | 4.52 | 4.60 | |
bin_047_Proteobacteria | 4.10 | 4.11 | |
bin_009_Firmicutes | 32.13 | 35.89 | |
bin_030_Verrucomicrobia | 6.14 | 6.07 | |
bin_051 | 3.64 | 3.93 | |
bin_003_Planctomycetes | 112.91 | 113.22 | |
bin_075 | 2.88 | 2.87 | |
bin_058 | 5.55 | 7.05 | |
bin_031_Chloroflexi | 5.93 | 6.48 | |
bin_016_Proteobacteria | 15.42 | 15.53 | |
bin_049_Ignavibacteriae | 4.93 | 6.32 | |
bin_020_Ignavibacteriae | 11.99 | 13.86 | |
bin_010_Ignavibacteriae | 34.80 | 34.23 | |
bin_037 | 6.29 | 7.66 | |
bin_067_Ignavibacteriae | 3.39 | 4.74 | |
bin_006_Proteobacteria | 37.77 | 47.57 | |
bin_086_Bacteroidetes | 2.60 | 3.48 | |
bin_013_mixed | 14.65 | 17.74 | |
bin_029_Proteobacteria | 9.10 | 10.21 | |
bin_014_Proteobacteria | 18.59 | 17.76 | |
bin_053 | 4.46 | 4.72 | |
bin_068_Proteobacteria | 4.55 | 5.00 | |
bin_005_Chloroflexi | 36.45 | 48.21 | |
bin_026_Chloroflexi | 8.43 | 8.07 | |
bin_007_Acidobacteria | 23.55 | 25.35 | |
bin_101_Chlorobi | 2.34 | 4.62 | |
bin_059 | 3.57 | 6.16 | |
bin_050_Ignavibacteriae | 3.92 | 6.04 | |
bin_090_Gemmatimonadetes | 2.47 | 4.67 | |
bin_096_Actinobacteria | 2.19 | 2.96 | |
bin_072 | 3.40 | 3.97 | |
bin_102 | 2.04 | 2.29 | |
bin_087_Proteobacteria | 2.78 | 3.50 | |
bin_036_Proteobacteria | 5.36 | 5.11 | |
bin_012_Verrucomicrobia | 14.60 | 15.34 | |
bin_041_Chloroflexi | 4.71 | 5.19 | |
bin_070_Ignavibacteriae | 3.25 | 4.69 | |
bin_001_Chloroflexi | 220.55 | 279.34 | |
bin_022_Armatimonadetes | 9.56 | 10.11 | |
bin_018_Bacteroidetes | 14.07 | 15.94 | |
bin_069_Bacteroidetes | 3.24 | 3.85 | |
bin_060 | 4.05 | 3.91 | |
bin_071 | 3.70 | 4.03 | |
bin_035 | 5.19 | 5.24 | |
bin_025_Proteobacteria | 9.62 | 10.68 | |
bin_092_Proteobacteria | 2.26 | 2.75 | |
bin_039_Chloroflexi | 4.95 | 5.31 | |
bin_091 | 2.19 | 2.29 | |
bin_019_Proteobacteria | 14.50 | 14.78 | |
bin_066_Actinobacteria | 4.31 | 4.67 | |
bin_034_Proteobacteria | 6.52 | 6.98 | |
bin_084_Actinobacteria | 3.65 | 3.44 | |
bin_095 | 2.11 | 2.46 | |
bin_042_Chloroflexi | 4.28 | 4.76 | |
bin_076_Gemmatimonadetes | 3.19 | 3.26 | |
bin_021 | 10.97 | 12.54 | |
bin_052 | 4.63 | 5.03 | |
bin_017 | 17.67 | 18.68 | |
bin_046_Ignavibacteriae | 4.00 | 8.11 | |
bin_065 | 3.21 | 3.84 | |
bin_024 | 12.20 | 12.91 | |
bin_002_Unknown | 137.52 | 181.91 | |
bin_109 | 1.82 | 2.03 | |
bin_082 | 2.24 | 2.69 | |
bin_033_Ignavibacteriae | 5.90 | 6.15 | |
bin_027 | 12.05 | 16.28 | |
bin_103 | 1.96 | 2.27 | |
bin_057 | 12.00 | 17.14 | |
bin_028 | 9.24 | 9.41 | |
bin_079 | 3.08 | 3.05 | |
bin_081 | 2.15 | 2.56 | |
bin_077 | 2.84 | 3.21 | |
bin_083 | 2.73 | 3.05 | |
bin_089 | 2.83 | 3.00 | |
bin_111 | 1.69 | 2.11 | |
bin_106 | 1.94 | 2.59 | |
bin_074 | 2.99 | 3.39 | |
bin_100 | 1.93 | 2.35 | |
bin_094 | 2.22 | 2.67 | |
bin_080 | 3.10 | 3.26 | |
bin_043 | 6.10 | 9.70 | |
bin_093 | 2.35 | 2.71 | |
bin_105 | 1.84 | 2.02 | |
bin_110 | 1.73 | 1.87 | |
bin_061 | 6.17 | 8.74 | |
bin_108 | 1.78 | 2.03 | |
bin_085 | 2.66 | 2.65 | |
bin_107 | 1.81 | 2.12 | |
bin_054 | 4.78 | 4.98 | |
bin_099 | 2.04 | 2.21 | |
bin_008_Planctomycetes | 25.35 | 28.80 | |
bin_104 | 1.96 | 2.25 | |
bin_088 | 2.26 | 2.61 | |
bin_097 | 2.17 | 2.27 | |
bin_044 | 5.48 | 8.50 | |
bin_098 | 2.09 | 2.45 | |
bin_055 | 4.01 | 4.21 | |
bin_073 | 3.67 | 3.87 | |
bin_078 | 7.82 | 11.26 | |
bin_021_rest | 13.88 | 15.16 | |
bin_011 | 54.13 | 64.04 | |
bin_015 | 49.66 | 63.77 |
TAB-delimited matrix file for mean_coverage: bins_across_samples/mean_coverage.txt
Bin | SAMPL ... | SAMPL ... | |
---|---|---|---|
bin_000 | 27.33 | 33.46 | |
bin_063 | 7.79 | 8.05 | |
bin_038_Gemmatimonadetes | 18.17 | 17.60 | |
bin_056_Proteobacteria | 7.09 | 6.95 | |
bin_023_Proteobacteria | 54.86 | 68.90 | |
bin_004_Proteobacteria | 346.69 | 389.57 | |
bin_032_Bacteroidetes | 25.12 | 30.00 | |
bin_064_Actinobacteria | 8.74 | 9.89 | |
bin_045_Proteobacteria | 13.11 | 14.84 | |
bin_062_Proteobacteria | 9.84 | 10.35 | |
bin_048_Proteobacteria | 11.91 | 11.69 | |
bin_047_Proteobacteria | 12.43 | 11.69 | |
bin_009_Firmicutes | 238.96 | 281.20 | |
bin_030_Verrucomicrobia | 29.39 | 26.97 | |
bin_051 | 9.60 | 10.68 | |
bin_003_Planctomycetes | 603.65 | 614.38 | |
bin_075 | 6.33 | 6.67 | |
bin_058 | 15.34 | 21.17 | |
bin_031_Chloroflexi | 25.58 | 29.27 | |
bin_016_Proteobacteria | 98.79 | 93.88 | |
bin_049_Ignavibacteriae | 13.76 | 21.24 | |
bin_020_Ignavibacteriae | 69.08 | 87.72 | |
bin_010_Ignavibacteriae | 188.52 | 187.21 | |
bin_037 | 19.68 | 24.15 | |
bin_067_Ignavibacteriae | 8.61 | 15.10 | |
bin_006_Proteobacteria | 273.86 | 353.22 | |
bin_086_Bacteroidetes | 5.40 | 9.29 | |
bin_013_mixed | 113.96 | 148.06 | |
bin_029_Proteobacteria | 34.56 | 35.54 | |
bin_014_Proteobacteria | 111.94 | 106.09 | |
bin_053 | 11.36 | 11.89 | |
bin_068_Proteobacteria | 8.38 | 10.11 | |
bin_005_Chloroflexi | 343.82 | 465.84 | |
bin_026_Chloroflexi | 49.17 | 44.48 | |
bin_007_Acidobacteria | 260.10 | 291.96 | |
bin_101_Chlorobi | 4.37 | 14.81 | |
bin_059 | 10.29 | 27.35 | |
bin_050_Ignavibacteriae | 11.77 | 23.64 | |
bin_090_Gemmatimonadetes | 5.01 | 16.64 | |
bin_096_Actinobacteria | 4.05 | 7.14 | |
bin_072 | 7.52 | 9.52 | |
bin_102 | 3.53 | 5.05 | |
bin_087_Proteobacteria | 5.63 | 8.26 | |
bin_036_Proteobacteria | 19.50 | 16.91 | |
bin_012_Verrucomicrobia | 121.99 | 126.72 | |
bin_041_Chloroflexi | 16.29 | 18.22 | |
bin_070_Ignavibacteriae | 8.36 | 15.79 | |
bin_001_Chloroflexi | 1.86 Kb | 2.41 Kb | |
bin_022_Armatimonadetes | 64.47 | 67.56 | |
bin_018_Bacteroidetes | 82.18 | 98.46 | |
bin_069_Bacteroidetes | 7.43 | 9.53 | |
bin_060 | 10.36 | 9.37 | |
bin_071 | 8.35 | 10.23 | |
bin_035 | 19.72 | 19.41 | |
bin_025_Proteobacteria | 53.24 | 59.81 | |
bin_092_Proteobacteria | 4.26 | 6.28 | |
bin_039_Chloroflexi | 16.93 | 18.11 | |
bin_091 | 4.19 | 5.13 | |
bin_019_Proteobacteria | 81.36 | 79.31 | |
bin_066_Actinobacteria | 10.60 | 11.96 | |
bin_034_Proteobacteria | 21.07 | 23.24 | |
bin_084_Actinobacteria | 9.50 | 8.51 | |
bin_095 | 3.87 | 5.43 | |
bin_042_Chloroflexi | 15.10 | 17.33 | |
bin_076_Gemmatimonadetes | 7.83 | 8.05 | |
bin_021 | 66.01 | 79.87 | |
bin_052 | 11.79 | 12.18 | |
bin_017 | 83.25 | 87.79 | |
bin_046_Ignavibacteriae | 12.66 | 43.81 | |
bin_065 | 9.62 | 12.67 | |
bin_024 | 55.17 | 57.48 | |
bin_002_Unknown | 1.13 Kb | 1.56 Kb | |
bin_109 | 2.92 | 4.30 | |
bin_082 | 4.64 | 6.35 | |
bin_033_Ignavibacteriae | 24.08 | 25.49 | |
bin_027 | 37.99 | 53.96 | |
bin_103 | 3.38 | 5.00 | |
bin_057 | 16.81 | 29.51 | |
bin_028 | 37.62 | 37.89 | |
bin_079 | 6.44 | 7.03 | |
bin_081 | 4.23 | 5.94 | |
bin_077 | 6.12 | 7.60 | |
bin_083 | 5.55 | 7.08 | |
bin_089 | 6.30 | 7.47 | |
bin_111 | 2.64 | 4.72 | |
bin_106 | 3.21 | 5.74 | |
bin_074 | 6.52 | 8.09 | |
bin_100 | 3.30 | 5.18 | |
bin_094 | 4.14 | 6.18 | |
bin_080 | 6.25 | 7.40 | |
bin_043 | 15.71 | 29.60 | |
bin_093 | 4.26 | 5.92 | |
bin_105 | 3.02 | 4.39 | |
bin_110 | 2.79 | 3.98 | |
bin_061 | 11.70 | 19.14 | |
bin_108 | 2.90 | 4.44 | |
bin_085 | 5.81 | 6.12 | |
bin_107 | 3.09 | 4.81 | |
bin_054 | 11.35 | 11.99 | |
bin_099 | 3.62 | 4.83 | |
bin_008_Planctomycetes | 239.71 | 283.82 | |
bin_104 | 3.30 | 4.94 | |
bin_088 | 4.24 | 5.96 | |
bin_097 | 4.03 | 5.12 | |
bin_044 | 12.95 | 25.30 | |
bin_098 | 3.55 | 5.17 | |
bin_055 | 10.47 | 10.90 | |
bin_073 | 7.93 | 8.85 | |
bin_078 | 10.31 | 17.90 | |
bin_021_rest | 67.71 | 78.94 | |
bin_011 | 170.61 | 212.26 | |
bin_015 | 125.84 | 155.41 |
TAB-delimited matrix file for mean_coverage_Q2Q3: bins_across_samples/mean_coverage_Q2Q3.txt
Bin | SAMPL ... | SAMPL ... | |
---|---|---|---|
bin_000 | 27.41 | 33.62 | |
bin_063 | 7.70 | 7.92 | |
bin_038_Gemmatimonadetes | 18.00 | 17.43 | |
bin_056_Proteobacteria | 6.93 | 6.77 | |
bin_023_Proteobacteria | 54.78 | 68.89 | |
bin_004_Proteobacteria | 348.33 | 391.30 | |
bin_032_Bacteroidetes | 24.81 | 29.58 | |
bin_064_Actinobacteria | 8.58 | 9.73 | |
bin_045_Proteobacteria | 12.78 | 14.38 | |
bin_062_Proteobacteria | 9.46 | 9.94 | |
bin_048_Proteobacteria | 11.64 | 11.37 | |
bin_047_Proteobacteria | 12.23 | 11.46 | |
bin_009_Firmicutes | 239.18 | 281.73 | |
bin_030_Verrucomicrobia | 29.18 | 26.72 | |
bin_051 | 9.42 | 10.49 | |
bin_003_Planctomycetes | 604.41 | 615.74 | |
bin_075 | 6.16 | 6.48 | |
bin_058 | 15.28 | 21.09 | |
bin_031_Chloroflexi | 25.30 | 28.99 | |
bin_016_Proteobacteria | 98.36 | 93.36 | |
bin_049_Ignavibacteriae | 13.48 | 21.01 | |
bin_020_Ignavibacteriae | 68.70 | 87.27 | |
bin_010_Ignavibacteriae | 192.06 | 190.79 | |
bin_037 | 19.52 | 23.87 | |
bin_067_Ignavibacteriae | 8.41 | 14.97 | |
bin_006_Proteobacteria | 278.36 | 359.08 | |
bin_086_Bacteroidetes | 5.20 | 9.08 | |
bin_013_mixed | 114.08 | 148.37 | |
bin_029_Proteobacteria | 34.20 | 34.89 | |
bin_014_Proteobacteria | 112.44 | 106.40 | |
bin_053 | 11.05 | 11.54 | |
bin_068_Proteobacteria | 7.75 | 9.46 | |
bin_005_Chloroflexi | 344.40 | 467.16 | |
bin_026_Chloroflexi | 48.93 | 44.30 | |
bin_007_Acidobacteria | 259.64 | 291.78 | |
bin_101_Chlorobi | 4.15 | 14.55 | |
bin_059 | 10.10 | 27.11 | |
bin_050_Ignavibacteriae | 11.61 | 23.59 | |
bin_090_Gemmatimonadetes | 4.80 | 16.42 | |
bin_096_Actinobacteria | 3.88 | 6.98 | |
bin_072 | 7.23 | 9.18 | |
bin_102 | 3.35 | 4.89 | |
bin_087_Proteobacteria | 5.43 | 8.05 | |
bin_036_Proteobacteria | 19.27 | 16.66 | |
bin_012_Verrucomicrobia | 122.06 | 126.77 | |
bin_041_Chloroflexi | 16.14 | 18.03 | |
bin_070_Ignavibacteriae | 8.16 | 15.56 | |
bin_001_Chloroflexi | 1.88 Kb | 2.44 Kb | |
bin_022_Armatimonadetes | 64.31 | 67.40 | |
bin_018_Bacteroidetes | 81.41 | 97.69 | |
bin_069_Bacteroidetes | 7.17 | 9.23 | |
bin_060 | 10.14 | 9.10 | |
bin_071 | 8.15 | 10.04 | |
bin_035 | 19.61 | 19.26 | |
bin_025_Proteobacteria | 53.03 | 59.51 | |
bin_092_Proteobacteria | 4.09 | 6.11 | |
bin_039_Chloroflexi | 16.79 | 17.96 | |
bin_091 | 4.04 | 4.97 | |
bin_019_Proteobacteria | 81.85 | 79.38 | |
bin_066_Actinobacteria | 10.37 | 11.70 | |
bin_034_Proteobacteria | 20.72 | 22.88 | |
bin_084_Actinobacteria | 9.40 | 8.34 | |
bin_095 | 3.70 | 5.26 | |
bin_042_Chloroflexi | 14.93 | 17.15 | |
bin_076_Gemmatimonadetes | 7.71 | 7.86 | |
bin_021 | 65.79 | 79.64 | |
bin_052 | 11.35 | 11.65 | |
bin_017 | 85.81 | 90.52 | |
bin_046_Ignavibacteriae | 12.44 | 43.62 | |
bin_065 | 9.90 | 12.99 | |
bin_024 | 55.59 | 57.79 | |
bin_002_Unknown | 1.13 Kb | 1.57 Kb | |
bin_109 | 2.74 | 4.12 | |
bin_082 | 4.47 | 6.19 | |
bin_033_Ignavibacteriae | 23.79 | 25.20 | |
bin_027 | 38.56 | 55.01 | |
bin_103 | 3.22 | 4.85 | |
bin_057 | 14.22 | 26.07 | |
bin_028 | 38.00 | 38.16 | |
bin_079 | 6.27 | 6.87 | |
bin_081 | 4.06 | 5.75 | |
bin_077 | 5.94 | 7.39 | |
bin_083 | 5.36 | 6.90 | |
bin_089 | 6.36 | 7.58 | |
bin_111 | 2.47 | 4.59 | |
bin_106 | 3.05 | 5.61 | |
bin_074 | 6.31 | 7.86 | |
bin_100 | 3.11 | 5.02 | |
bin_094 | 3.98 | 6.03 | |
bin_080 | 6.04 | 7.19 | |
bin_043 | 15.34 | 29.12 | |
bin_093 | 4.05 | 5.70 | |
bin_105 | 2.85 | 4.24 | |
bin_110 | 2.62 | 3.83 | |
bin_061 | 10.85 | 18.14 | |
bin_108 | 2.74 | 4.31 | |
bin_085 | 5.68 | 5.96 | |
bin_107 | 2.94 | 4.69 | |
bin_054 | 10.92 | 11.55 | |
bin_099 | 3.45 | 4.67 | |
bin_008_Planctomycetes | 240.20 | 284.58 | |
bin_104 | 3.12 | 4.79 | |
bin_088 | 4.07 | 5.81 | |
bin_097 | 3.88 | 4.98 | |
bin_044 | 12.81 | 25.22 | |
bin_098 | 3.36 | 4.98 | |
bin_055 | 10.31 | 10.72 | |
bin_073 | 7.75 | 8.65 | |
bin_078 | 8.70 | 15.87 | |
bin_021_rest | 68.15 | 79.57 | |
bin_011 | 166.64 | 207.04 | |
bin_015 | 115.91 | 142.04 |
TAB-delimited matrix file for max_normalized_ratio: bins_across_samples/max_normalized_ratio.txt
Bin | SAMPL ... | SAMPL ... | |
---|---|---|---|
bin_000 | 0.80 | 0.94 | |
bin_063 | 0.93 | 0.84 | |
bin_038_Gemmatimonadetes | 1.00 | 0.80 | |
bin_056_Proteobacteria | 0.90 | 0.83 | |
bin_023_Proteobacteria | 0.93 | 0.97 | |
bin_004_Proteobacteria | 1.00 | 0.93 | |
bin_032_Bacteroidetes | 0.95 | 0.96 | |
bin_064_Actinobacteria | 0.97 | 0.91 | |
bin_045_Proteobacteria | 0.96 | 0.88 | |
bin_062_Proteobacteria | 0.99 | 0.87 | |
bin_048_Proteobacteria | 0.98 | 0.79 | |
bin_047_Proteobacteria | 0.98 | 0.76 | |
bin_009_Firmicutes | 1.00 | 0.97 | |
bin_030_Verrucomicrobia | 1.00 | 0.76 | |
bin_051 | 0.91 | 0.90 | |
bin_003_Planctomycetes | 1.00 | 0.84 | |
bin_075 | 0.94 | 0.85 | |
bin_058 | 0.83 | 0.99 | |
bin_031_Chloroflexi | 1.00 | 0.94 | |
bin_016_Proteobacteria | 1.00 | 0.78 | |
bin_049_Ignavibacteriae | 0.74 | 0.98 | |
bin_020_Ignavibacteriae | 0.95 | 1.00 | |
bin_010_Ignavibacteriae | 1.00 | 0.82 | |
bin_037 | 0.93 | 0.93 | |
bin_067_Ignavibacteriae | 0.68 | 1.00 | |
bin_006_Proteobacteria | 0.94 | 1.00 | |
bin_086_Bacteroidetes | 0.69 | 1.00 | |
bin_013_mixed | 0.93 | 1.00 | |
bin_029_Proteobacteria | 0.98 | 0.83 | |
bin_014_Proteobacteria | 1.00 | 0.78 | |
bin_053 | 0.98 | 0.84 | |
bin_068_Proteobacteria | 0.94 | 0.96 | |
bin_005_Chloroflexi | 0.89 | 1.00 | |
bin_026_Chloroflexi | 1.00 | 0.75 | |
bin_007_Acidobacteria | 1.00 | 0.93 | |
bin_101_Chlorobi | 0.35 | 1.00 | |
bin_059 | 0.45 | 1.00 | |
bin_050_Ignavibacteriae | 0.60 | 1.00 | |
bin_090_Gemmatimonadetes | 0.35 | 1.00 | |
bin_096_Actinobacteria | 0.67 | 1.00 | |
bin_072 | 0.90 | 0.95 | |
bin_102 | 0.79 | 0.96 | |
bin_087_Proteobacteria | 0.81 | 0.99 | |
bin_036_Proteobacteria | 1.00 | 0.72 | |
bin_012_Verrucomicrobia | 1.00 | 0.86 | |
bin_041_Chloroflexi | 1.00 | 0.92 | |
bin_070_Ignavibacteriae | 0.64 | 1.00 | |
bin_001_Chloroflexi | 0.94 | 1.00 | |
bin_022_Armatimonadetes | 1.00 | 0.86 | |
bin_018_Bacteroidetes | 0.99 | 0.98 | |
bin_069_Bacteroidetes | 0.90 | 0.97 | |
bin_060 | 0.98 | 0.73 | |
bin_071 | 0.87 | 0.89 | |
bin_035 | 1.00 | 0.81 | |
bin_025_Proteobacteria | 1.00 | 0.93 | |
bin_092_Proteobacteria | 0.80 | 0.98 | |
bin_039_Chloroflexi | 0.99 | 0.87 | |
bin_091 | 0.85 | 0.91 | |
bin_019_Proteobacteria | 1.00 | 0.80 | |
bin_066_Actinobacteria | 0.97 | 0.91 | |
bin_034_Proteobacteria | 0.98 | 0.89 | |
bin_084_Actinobacteria | 1.00 | 0.73 | |
bin_095 | 0.80 | 0.96 | |
bin_042_Chloroflexi | 0.99 | 0.95 | |
bin_076_Gemmatimonadetes | 0.99 | 0.84 | |
bin_021 | 0.99 | 0.99 | |
bin_052 | 0.99 | 0.84 | |
bin_017 | 1.00 | 0.87 | |
bin_046_Ignavibacteriae | 0.35 | 1.00 | |
bin_065 | 0.65 | 0.97 | |
bin_024 | 1.00 | 0.85 | |
bin_002_Unknown | 0.87 | 1.00 | |
bin_109 | 0.74 | 0.95 | |
bin_082 | 0.67 | 0.91 | |
bin_033_Ignavibacteriae | 1.00 | 0.87 | |
bin_027 | 0.84 | 0.99 | |
bin_103 | 0.75 | 0.96 | |
bin_057 | 0.66 | 0.99 | |
bin_028 | 1.00 | 0.83 | |
bin_079 | 0.93 | 0.88 | |
bin_081 | 0.74 | 0.96 | |
bin_077 | 0.89 | 0.94 | |
bin_083 | 0.86 | 0.95 | |
bin_089 | 0.90 | 0.88 | |
bin_111 | 0.63 | 0.98 | |
bin_106 | 0.66 | 0.99 | |
bin_074 | 0.89 | 0.95 | |
bin_100 | 0.67 | 0.96 | |
bin_094 | 0.76 | 0.96 | |
bin_080 | 0.87 | 0.91 | |
bin_043 | 0.64 | 0.99 | |
bin_093 | 0.80 | 0.96 | |
bin_105 | 0.75 | 0.95 | |
bin_110 | 0.76 | 0.94 | |
bin_061 | 0.66 | 0.98 | |
bin_108 | 0.73 | 0.96 | |
bin_085 | 0.95 | 0.85 | |
bin_107 | 0.72 | 0.97 | |
bin_054 | 0.98 | 0.87 | |
bin_099 | 0.79 | 0.93 | |
bin_008_Planctomycetes | 1.00 | 0.98 | |
bin_104 | 0.75 | 0.97 | |
bin_088 | 0.81 | 0.97 | |
bin_097 | 0.86 | 0.93 | |
bin_044 | 0.62 | 1.00 | |
bin_098 | 0.75 | 0.95 | |
bin_055 | 0.98 | 0.85 | |
bin_073 | 0.92 | 0.89 | |
bin_078 | 0.60 | 0.99 | |
bin_021_rest | 0.99 | 0.96 | |
bin_011 | 0.92 | 0.93 | |
bin_015 | 0.94 | 0.94 |
TAB-delimited matrix file for relative_abundance: bins_across_samples/relative_abundance.txt
Bin | SAMPL ... | SAMPL ... | |
---|---|---|---|
bin_000 | 0.45 | 0.55 | |
bin_063 | 0.52 | 0.48 | |
bin_038_Gemmatimonadetes | 0.56 | 0.44 | |
bin_056_Proteobacteria | 0.52 | 0.48 | |
bin_023_Proteobacteria | 0.49 | 0.51 | |
bin_004_Proteobacteria | 0.52 | 0.48 | |
bin_032_Bacteroidetes | 0.50 | 0.50 | |
bin_064_Actinobacteria | 0.51 | 0.49 | |
bin_045_Proteobacteria | 0.52 | 0.48 | |
bin_062_Proteobacteria | 0.54 | 0.46 | |
bin_048_Proteobacteria | 0.55 | 0.45 | |
bin_047_Proteobacteria | 0.56 | 0.44 | |
bin_009_Firmicutes | 0.51 | 0.49 | |
bin_030_Verrucomicrobia | 0.57 | 0.43 | |
bin_051 | 0.50 | 0.50 | |
bin_003_Planctomycetes | 0.54 | 0.46 | |
bin_075 | 0.52 | 0.48 | |
bin_058 | 0.45 | 0.55 | |
bin_031_Chloroflexi | 0.51 | 0.49 | |
bin_016_Proteobacteria | 0.56 | 0.44 | |
bin_049_Ignavibacteriae | 0.43 | 0.57 | |
bin_020_Ignavibacteriae | 0.49 | 0.51 | |
bin_010_Ignavibacteriae | 0.55 | 0.45 | |
bin_037 | 0.50 | 0.50 | |
bin_067_Ignavibacteriae | 0.41 | 0.59 | |
bin_006_Proteobacteria | 0.48 | 0.52 | |
bin_086_Bacteroidetes | 0.41 | 0.59 | |
bin_013_mixed | 0.48 | 0.52 | |
bin_029_Proteobacteria | 0.54 | 0.46 | |
bin_014_Proteobacteria | 0.56 | 0.44 | |
bin_053 | 0.54 | 0.46 | |
bin_068_Proteobacteria | 0.50 | 0.50 | |
bin_005_Chloroflexi | 0.47 | 0.53 | |
bin_026_Chloroflexi | 0.57 | 0.43 | |
bin_007_Acidobacteria | 0.52 | 0.48 | |
bin_101_Chlorobi | 0.26 | 0.74 | |
bin_059 | 0.31 | 0.69 | |
bin_050_Ignavibacteriae | 0.37 | 0.63 | |
bin_090_Gemmatimonadetes | 0.26 | 0.74 | |
bin_096_Actinobacteria | 0.40 | 0.60 | |
bin_072 | 0.49 | 0.51 | |
bin_102 | 0.44 | 0.56 | |
bin_087_Proteobacteria | 0.45 | 0.55 | |
bin_036_Proteobacteria | 0.58 | 0.42 | |
bin_012_Verrucomicrobia | 0.54 | 0.46 | |
bin_041_Chloroflexi | 0.52 | 0.48 | |
bin_070_Ignavibacteriae | 0.39 | 0.61 | |
bin_001_Chloroflexi | 0.48 | 0.52 | |
bin_022_Armatimonadetes | 0.54 | 0.46 | |
bin_018_Bacteroidetes | 0.50 | 0.50 | |
bin_069_Bacteroidetes | 0.48 | 0.52 | |
bin_060 | 0.57 | 0.43 | |
bin_071 | 0.49 | 0.51 | |
bin_035 | 0.55 | 0.45 | |
bin_025_Proteobacteria | 0.52 | 0.48 | |
bin_092_Proteobacteria | 0.45 | 0.55 | |
bin_039_Chloroflexi | 0.53 | 0.47 | |
bin_091 | 0.48 | 0.52 | |
bin_019_Proteobacteria | 0.56 | 0.44 | |
bin_066_Actinobacteria | 0.52 | 0.48 | |
bin_034_Proteobacteria | 0.52 | 0.48 | |
bin_084_Actinobacteria | 0.58 | 0.42 | |
bin_095 | 0.45 | 0.55 | |
bin_042_Chloroflexi | 0.51 | 0.49 | |
bin_076_Gemmatimonadetes | 0.54 | 0.46 | |
bin_021 | 0.50 | 0.50 | |
bin_052 | 0.54 | 0.46 | |
bin_017 | 0.53 | 0.47 | |
bin_046_Ignavibacteriae | 0.26 | 0.74 | |
bin_065 | 0.38 | 0.62 | |
bin_024 | 0.54 | 0.46 | |
bin_002_Unknown | 0.47 | 0.53 | |
bin_109 | 0.43 | 0.57 | |
bin_082 | 0.40 | 0.60 | |
bin_033_Ignavibacteriae | 0.53 | 0.47 | |
bin_027 | 0.46 | 0.54 | |
bin_103 | 0.43 | 0.57 | |
bin_057 | 0.39 | 0.61 | |
bin_028 | 0.55 | 0.45 | |
bin_079 | 0.51 | 0.49 | |
bin_081 | 0.41 | 0.59 | |
bin_077 | 0.48 | 0.52 | |
bin_083 | 0.47 | 0.53 | |
bin_089 | 0.50 | 0.50 | |
bin_111 | 0.38 | 0.62 | |
bin_106 | 0.39 | 0.61 | |
bin_074 | 0.48 | 0.52 | |
bin_100 | 0.39 | 0.61 | |
bin_094 | 0.44 | 0.56 | |
bin_080 | 0.48 | 0.52 | |
bin_043 | 0.39 | 0.61 | |
bin_093 | 0.45 | 0.55 | |
bin_105 | 0.43 | 0.57 | |
bin_110 | 0.43 | 0.57 | |
bin_061 | 0.39 | 0.61 | |
bin_108 | 0.42 | 0.58 | |
bin_085 | 0.53 | 0.47 | |
bin_107 | 0.41 | 0.59 | |
bin_054 | 0.53 | 0.47 | |
bin_099 | 0.45 | 0.55 | |
bin_008_Planctomycetes | 0.51 | 0.49 | |
bin_104 | 0.43 | 0.57 | |
bin_088 | 0.45 | 0.55 | |
bin_097 | 0.47 | 0.53 | |
bin_044 | 0.38 | 0.62 | |
bin_098 | 0.43 | 0.57 | |
bin_055 | 0.54 | 0.46 | |
bin_073 | 0.51 | 0.49 | |
bin_078 | 0.37 | 0.63 | |
bin_021_rest | 0.51 | 0.49 | |
bin_011 | 0.50 | 0.50 | |
bin_015 | 0.50 | 0.50 |
TAB-delimited matrix file for detection: bins_across_samples/detection.txt
Bin | SAMPL ... | SAMPL ... | |
---|---|---|---|
bin_000 | 0.93 | 1.00 | |
bin_063 | 0.97 | 1.00 | |
bin_038_Gemmatimonadetes | 1.00 | 1.00 | |
bin_056_Proteobacteria | 0.95 | 1.00 | |
bin_023_Proteobacteria | 1.00 | 1.00 | |
bin_004_Proteobacteria | 1.00 | 1.00 | |
bin_032_Bacteroidetes | 1.00 | 1.00 | |
bin_064_Actinobacteria | 0.99 | 1.00 | |
bin_045_Proteobacteria | 1.00 | 1.00 | |
bin_062_Proteobacteria | 1.00 | 1.00 | |
bin_048_Proteobacteria | 0.99 | 1.00 | |
bin_047_Proteobacteria | 0.99 | 1.00 | |
bin_009_Firmicutes | 1.00 | 1.00 | |
bin_030_Verrucomicrobia | 1.00 | 1.00 | |
bin_051 | 0.98 | 1.00 | |
bin_003_Planctomycetes | 1.00 | 1.00 | |
bin_075 | 0.97 | 1.00 | |
bin_058 | 0.98 | 1.00 | |
bin_031_Chloroflexi | 1.00 | 1.00 | |
bin_016_Proteobacteria | 1.00 | 1.00 | |
bin_049_Ignavibacteriae | 1.00 | 1.00 | |
bin_020_Ignavibacteriae | 1.00 | 1.00 | |
bin_010_Ignavibacteriae | 1.00 | 1.00 | |
bin_037 | 1.00 | 1.00 | |
bin_067_Ignavibacteriae | 1.00 | 1.00 | |
bin_006_Proteobacteria | 1.00 | 1.00 | |
bin_086_Bacteroidetes | 0.98 | 1.00 | |
bin_013_mixed | 1.00 | 1.00 | |
bin_029_Proteobacteria | 1.00 | 1.00 | |
bin_014_Proteobacteria | 1.00 | 1.00 | |
bin_053 | 0.99 | 1.00 | |
bin_068_Proteobacteria | 0.99 | 1.00 | |
bin_005_Chloroflexi | 1.00 | 1.00 | |
bin_026_Chloroflexi | 1.00 | 1.00 | |
bin_007_Acidobacteria | 1.00 | 1.00 | |
bin_101_Chlorobi | 0.98 | 1.00 | |
bin_059 | 1.00 | 1.00 | |
bin_050_Ignavibacteriae | 1.00 | 1.00 | |
bin_090_Gemmatimonadetes | 0.99 | 1.00 | |
bin_096_Actinobacteria | 0.95 | 1.00 | |
bin_072 | 0.99 | 1.00 | |
bin_102 | 0.92 | 1.00 | |
bin_087_Proteobacteria | 0.98 | 1.00 | |
bin_036_Proteobacteria | 1.00 | 1.00 | |
bin_012_Verrucomicrobia | 1.00 | 1.00 | |
bin_041_Chloroflexi | 1.00 | 1.00 | |
bin_070_Ignavibacteriae | 1.00 | 1.00 | |
bin_001_Chloroflexi | 1.00 | 1.00 | |
bin_022_Armatimonadetes | 1.00 | 1.00 | |
bin_018_Bacteroidetes | 1.00 | 1.00 | |
bin_069_Bacteroidetes | 0.99 | 1.00 | |
bin_060 | 0.99 | 1.00 | |
bin_071 | 0.98 | 1.00 | |
bin_035 | 1.00 | 1.00 | |
bin_025_Proteobacteria | 1.00 | 1.00 | |
bin_092_Proteobacteria | 0.96 | 1.00 | |
bin_039_Chloroflexi | 1.00 | 1.00 | |
bin_091 | 0.92 | 1.00 | |
bin_019_Proteobacteria | 1.00 | 1.00 | |
bin_066_Actinobacteria | 1.00 | 1.00 | |
bin_034_Proteobacteria | 1.00 | 1.00 | |
bin_084_Actinobacteria | 0.99 | 1.00 | |
bin_095 | 0.93 | 1.00 | |
bin_042_Chloroflexi | 1.00 | 1.00 | |
bin_076_Gemmatimonadetes | 0.99 | 1.00 | |
bin_021 | 1.00 | 1.00 | |
bin_052 | 1.00 | 1.00 | |
bin_017 | 1.00 | 1.00 | |
bin_046_Ignavibacteriae | 1.00 | 1.00 | |
bin_065 | 0.82 | 1.00 | |
bin_024 | 1.00 | 1.00 | |
bin_002_Unknown | 1.00 | 1.00 | |
bin_109 | 0.87 | 0.99 | |
bin_082 | 0.86 | 1.00 | |
bin_033_Ignavibacteriae | 1.00 | 1.00 | |
bin_027 | 1.00 | 1.00 | |
bin_103 | 0.91 | 1.00 | |
bin_057 | 1.00 | 1.00 | |
bin_028 | 1.00 | 1.00 | |
bin_079 | 0.97 | 1.00 | |
bin_081 | 0.86 | 1.00 | |
bin_077 | 0.97 | 1.00 | |
bin_083 | 0.95 | 1.00 | |
bin_089 | 0.95 | 1.00 | |
bin_111 | 0.86 | 1.00 | |
bin_106 | 0.90 | 1.00 | |
bin_074 | 0.98 | 1.00 | |
bin_100 | 0.86 | 1.00 | |
bin_094 | 0.94 | 1.00 | |
bin_080 | 0.95 | 1.00 | |
bin_043 | 1.00 | 1.00 | |
bin_093 | 0.93 | 1.00 | |
bin_105 | 0.88 | 0.99 | |
bin_110 | 0.87 | 0.99 | |
bin_061 | 0.95 | 1.00 | |
bin_108 | 0.88 | 1.00 | |
bin_085 | 0.97 | 1.00 | |
bin_107 | 0.89 | 1.00 | |
bin_054 | 0.99 | 1.00 | |
bin_099 | 0.90 | 1.00 | |
bin_008_Planctomycetes | 1.00 | 1.00 | |
bin_104 | 0.90 | 1.00 | |
bin_088 | 0.94 | 1.00 | |
bin_097 | 0.94 | 1.00 | |
bin_044 | 0.99 | 1.00 | |
bin_098 | 0.89 | 1.00 | |
bin_055 | 0.99 | 1.00 | |
bin_073 | 0.97 | 1.00 | |
bin_078 | 0.96 | 1.00 | |
bin_021_rest | 1.00 | 1.00 | |
bin_011 | 1.00 | 1.00 | |
bin_015 | 1.00 | 1.00 |
TAB-delimited matrix file for abundance: bins_across_samples/abundance.txt
Bin | SAMPL ... | SAMPL ... | |
---|---|---|---|
bin_000 | 0.46 | 0.47 | |
bin_063 | 0.13 | 0.11 | |
bin_038_Gemmatimonadetes | 0.31 | 0.25 | |
bin_056_Proteobacteria | 0.12 | 0.10 | |
bin_023_Proteobacteria | 0.93 | 0.96 | |
bin_004_Proteobacteria | 5.85 | 5.43 | |
bin_032_Bacteroidetes | 0.42 | 0.42 | |
bin_064_Actinobacteria | 0.15 | 0.14 | |
bin_045_Proteobacteria | 0.22 | 0.21 | |
bin_062_Proteobacteria | 0.17 | 0.14 | |
bin_048_Proteobacteria | 0.20 | 0.16 | |
bin_047_Proteobacteria | 0.21 | 0.16 | |
bin_009_Firmicutes | 4.03 | 3.92 | |
bin_030_Verrucomicrobia | 0.50 | 0.38 | |
bin_051 | 0.16 | 0.15 | |
bin_003_Planctomycetes | 10.19 | 8.56 | |
bin_075 | 0.11 | 0.09 | |
bin_058 | 0.26 | 0.29 | |
bin_031_Chloroflexi | 0.43 | 0.41 | |
bin_016_Proteobacteria | 1.67 | 1.31 | |
bin_049_Ignavibacteriae | 0.23 | 0.30 | |
bin_020_Ignavibacteriae | 1.17 | 1.22 | |
bin_010_Ignavibacteriae | 3.18 | 2.61 | |
bin_037 | 0.33 | 0.34 | |
bin_067_Ignavibacteriae | 0.15 | 0.21 | |
bin_006_Proteobacteria | 4.62 | 4.92 | |
bin_086_Bacteroidetes | 0.09 | 0.13 | |
bin_013_mixed | 1.92 | 2.06 | |
bin_029_Proteobacteria | 0.58 | 0.50 | |
bin_014_Proteobacteria | 1.89 | 1.48 | |
bin_053 | 0.19 | 0.17 | |
bin_068_Proteobacteria | 0.14 | 0.14 | |
bin_005_Chloroflexi | 5.80 | 6.49 | |
bin_026_Chloroflexi | 0.83 | 0.62 | |
bin_007_Acidobacteria | 4.39 | 4.07 | |
bin_101_Chlorobi | 0.07 | 0.21 | |
bin_059 | 0.17 | 0.38 | |
bin_050_Ignavibacteriae | 0.20 | 0.33 | |
bin_090_Gemmatimonadetes | 0.08 | 0.23 | |
bin_096_Actinobacteria | 0.07 | 0.10 | |
bin_072 | 0.13 | 0.13 | |
bin_102 | 0.06 | 0.07 | |
bin_087_Proteobacteria | 0.09 | 0.12 | |
bin_036_Proteobacteria | 0.33 | 0.24 | |
bin_012_Verrucomicrobia | 2.06 | 1.77 | |
bin_041_Chloroflexi | 0.28 | 0.25 | |
bin_070_Ignavibacteriae | 0.14 | 0.22 | |
bin_001_Chloroflexi | 31.47 | 33.64 | |
bin_022_Armatimonadetes | 1.09 | 0.94 | |
bin_018_Bacteroidetes | 1.39 | 1.37 | |
bin_069_Bacteroidetes | 0.13 | 0.13 | |
bin_060 | 0.17 | 0.13 | |
bin_071 | 0.14 | 0.14 | |
bin_035 | 0.33 | 0.27 | |
bin_025_Proteobacteria | 0.90 | 0.83 | |
bin_092_Proteobacteria | 0.07 | 0.09 | |
bin_039_Chloroflexi | 0.29 | 0.25 | |
bin_091 | 0.07 | 0.07 | |
bin_019_Proteobacteria | 1.37 | 1.11 | |
bin_066_Actinobacteria | 0.18 | 0.17 | |
bin_034_Proteobacteria | 0.36 | 0.32 | |
bin_084_Actinobacteria | 0.16 | 0.12 | |
bin_095 | 0.07 | 0.08 | |
bin_042_Chloroflexi | 0.25 | 0.24 | |
bin_076_Gemmatimonadetes | 0.13 | 0.11 | |
bin_021 | 1.11 | 1.11 | |
bin_052 | 0.20 | 0.17 | |
bin_017 | 1.41 | 1.22 | |
bin_046_Ignavibacteriae | 0.21 | 0.61 | |
bin_065 | 0.16 | 0.18 | |
bin_024 | 0.93 | 0.80 | |
bin_002_Unknown | 19.04 | 21.81 | |
bin_109 | 0.05 | 0.06 | |
bin_082 | 0.08 | 0.09 | |
bin_033_Ignavibacteriae | 0.41 | 0.36 | |
bin_027 | 0.64 | 0.75 | |
bin_103 | 0.06 | 0.07 | |
bin_057 | 0.28 | 0.41 | |
bin_028 | 0.64 | 0.53 | |
bin_079 | 0.11 | 0.10 | |
bin_081 | 0.07 | 0.08 | |
bin_077 | 0.10 | 0.11 | |
bin_083 | 0.09 | 0.10 | |
bin_089 | 0.11 | 0.10 | |
bin_111 | 0.04 | 0.07 | |
bin_106 | 0.05 | 0.08 | |
bin_074 | 0.11 | 0.11 | |
bin_100 | 0.06 | 0.07 | |
bin_094 | 0.07 | 0.09 | |
bin_080 | 0.11 | 0.10 | |
bin_043 | 0.27 | 0.41 | |
bin_093 | 0.07 | 0.08 | |
bin_105 | 0.05 | 0.06 | |
bin_110 | 0.05 | 0.06 | |
bin_061 | 0.20 | 0.27 | |
bin_108 | 0.05 | 0.06 | |
bin_085 | 0.10 | 0.09 | |
bin_107 | 0.05 | 0.07 | |
bin_054 | 0.19 | 0.17 | |
bin_099 | 0.06 | 0.07 | |
bin_008_Planctomycetes | 4.05 | 3.96 | |
bin_104 | 0.06 | 0.07 | |
bin_088 | 0.07 | 0.08 | |
bin_097 | 0.07 | 0.07 | |
bin_044 | 0.22 | 0.35 | |
bin_098 | 0.06 | 0.07 | |
bin_055 | 0.18 | 0.15 | |
bin_073 | 0.13 | 0.12 | |
bin_078 | 0.17 | 0.25 | |
bin_021_rest | 1.14 | 1.10 | |
bin_011 | 2.88 | 2.96 | |
bin_015 | 2.12 | 2.17 |
TAB-delimited matrix file for variability: bins_across_samples/variability.txt
Bin | SAMPL ... | SAMPL ... | |
---|---|---|---|
bin_000 | 2.00 | 2.22 | |
bin_063 | 3.72 | 2.65 | |
bin_038_Gemmatimonadetes | 0.01 | 0.02 | |
bin_056_Proteobacteria | 0.05 | 0.06 | |
bin_023_Proteobacteria | 2.46 | 7.88 | |
bin_004_Proteobacteria | 0.88 | 0.83 | |
bin_032_Bacteroidetes | 2.53 | 2.73 | |
bin_064_Actinobacteria | 1.51 | 1.59 | |
bin_045_Proteobacteria | 6.33 | 6.08 | |
bin_062_Proteobacteria | 0.43 | 0.42 | |
bin_048_Proteobacteria | 4.13 | 3.75 | |
bin_047_Proteobacteria | 0.54 | 0.64 | |
bin_009_Firmicutes | 1.95 | 1.97 | |
bin_030_Verrucomicrobia | 0.21 | 0.21 | |
bin_051 | 3.31 | 3.41 | |
bin_003_Planctomycetes | 4.63 | 4.60 | |
bin_075 | 0.36 | 0.33 | |
bin_058 | 1.50 | 1.69 | |
bin_031_Chloroflexi | 0.25 | 0.27 | |
bin_016_Proteobacteria | 2.01 | 1.99 | |
bin_049_Ignavibacteriae | 2.74 | 4.79 | |
bin_020_Ignavibacteriae | 2.48 | 2.53 | |
bin_010_Ignavibacteriae | 12.18 | 11.79 | |
bin_037 | 6.59 | 7.23 | |
bin_067_Ignavibacteriae | 0.84 | 2.74 | |
bin_006_Proteobacteria | 7.99 | 8.88 | |
bin_086_Bacteroidetes | 0.07 | 0.13 | |
bin_013_mixed | 1.38 | 1.26 | |
bin_029_Proteobacteria | 5.64 | 8.14 | |
bin_014_Proteobacteria | 1.52 | 1.51 | |
bin_053 | 4.17 | 4.02 | |
bin_068_Proteobacteria | 3.08 | 3.33 | |
bin_005_Chloroflexi | 1.95 | 1.96 | |
bin_026_Chloroflexi | 1.12 | 0.89 | |
bin_007_Acidobacteria | 0.57 | 0.57 | |
bin_101_Chlorobi | 0.06 | 0.79 | |
bin_059 | 0.04 | 0.08 | |
bin_050_Ignavibacteriae | 2.83 | 5.80 | |
bin_090_Gemmatimonadetes | 0.01 | 0.01 | |
bin_096_Actinobacteria | 0.10 | 0.91 | |
bin_072 | 1.47 | 1.66 | |
bin_102 | 0.07 | 0.08 | |
bin_087_Proteobacteria | 0.29 | 0.38 | |
bin_036_Proteobacteria | 0.33 | 0.43 | |
bin_012_Verrucomicrobia | 0.83 | 0.82 | |
bin_041_Chloroflexi | 2.26 | 2.57 | |
bin_070_Ignavibacteriae | 0.27 | 1.04 | |
bin_001_Chloroflexi | 4.18 | 4.18 | |
bin_022_Armatimonadetes | 0.36 | 0.36 | |
bin_018_Bacteroidetes | 0.89 | 0.94 | |
bin_069_Bacteroidetes | 0.58 | 0.66 | |
bin_060 | 1.44 | 1.29 | |
bin_071 | 2.65 | 2.37 | |
bin_035 | 2.58 | 2.20 | |
bin_025_Proteobacteria | 0.75 | 0.89 | |
bin_092_Proteobacteria | 0.14 | 0.20 | |
bin_039_Chloroflexi | 0.97 | 5.16 | |
bin_091 | 0.02 | 0.03 | |
bin_019_Proteobacteria | 5.99 | 7.08 | |
bin_066_Actinobacteria | 3.00 | 3.29 | |
bin_034_Proteobacteria | 6.65 | 7.00 | |
bin_084_Actinobacteria | 2.21 | 1.25 | |
bin_095 | 0.16 | 0.27 | |
bin_042_Chloroflexi | 0.34 | 0.55 | |
bin_076_Gemmatimonadetes | 0.01 | 0.04 | |
bin_021 | 1.31 | 1.41 | |
bin_052 | 1.91 | 2.06 | |
bin_017 | 21.55 | 21.61 | |
bin_046_Ignavibacteriae | 0.10 | 0.28 | |
bin_065 | 0.27 | 0.39 | |
bin_024 | 10.90 | 16.42 | |
bin_002_Unknown | 3.18 | 3.15 | |
bin_109 | 0.09 | 0.13 | |
bin_082 | 0.39 | 0.32 | |
bin_033_Ignavibacteriae | 0.11 | 0.11 | |
bin_027 | 11.98 | 17.21 | |
bin_103 | 0.04 | 0.07 | |
bin_057 | 19.57 | 23.33 | |
bin_028 | 8.07 | 8.83 | |
bin_079 | 4.82 | 3.78 | |
bin_081 | 0.05 | 0.08 | |
bin_077 | 0.73 | 0.67 | |
bin_083 | 1.07 | 0.85 | |
bin_089 | 0.07 | 0.06 | |
bin_111 | 0.07 | 0.22 | |
bin_106 | 0.09 | 1.15 | |
bin_074 | 1.65 | 1.72 | |
bin_100 | 0.62 | 0.62 | |
bin_094 | 0.02 | 0.02 | |
bin_080 | 4.34 | 4.31 | |
bin_043 | 3.39 | 4.51 | |
bin_093 | 1.04 | 1.41 | |
bin_105 | 0.09 | 0.13 | |
bin_110 | 0.04 | 0.03 | |
bin_061 | 5.68 | 7.21 | |
bin_108 | 0.09 | 0.12 | |
bin_085 | 0.08 | 0.07 | |
bin_107 | 0.11 | 0.11 | |
bin_054 | 5.24 | 4.71 | |
bin_099 | 0.11 | 0.13 | |
bin_008_Planctomycetes | 1.70 | 1.61 | |
bin_104 | 0.29 | 0.39 | |
bin_088 | 0.45 | 0.53 | |
bin_097 | 0.15 | 0.17 | |
bin_044 | 0.99 | 1.49 | |
bin_098 | 0.48 | 0.59 | |
bin_055 | 3.06 | 2.87 | |
bin_073 | 8.32 | 7.71 | |
bin_078 | 14.91 | 18.89 | |
bin_021_rest | 2.44 | 2.71 | |
bin_011 | 9.56 | 10.17 | |
bin_015 | 20.51 | 20.59 |
This panel shows how much of the mapped data is recruited by each bin (and how much of the mapped data was not binned under 'splits_not_binned' column). The way these percents calculated is quite simple: summarize the mean coverage of each split in each bin, and normalize every bin with respect to each other. It is critical to remember that these values do not take the unasssambled data into account. This is how you should read this table: "X percent of all mapped reads in Sample Y mapped to splits that were binned into bin Z".
TAB-delimited matrix file for percent recruitment: bins_across_samples/bins_percent_recruitment.txt
Sample | __splits_not_binned__ | bin_000 | bin_001_Chloroflexi | bin_002_Unknown | bin_003_Planctomycetes | bin_004_Proteobacteria | bin_005_Chloroflexi | bin_006_Proteobacteria | bin_007_Acidobacteria | bin_008_Planctomycetes | bin_009_Firmicutes | bin_010_Ignavibacteriae | bin_011 | bin_012_Verrucomicrobia | bin_013_mixed | bin_014_Proteobacteria | bin_015 | bin_016_Proteobacteria | bin_017 | bin_018_Bacteroidetes | bin_019_Proteobacteria | bin_020_Ignavibacteriae | bin_021 | bin_021_rest | bin_022_Armatimonadetes | bin_023_Proteobacteria | bin_024 | bin_025_Proteobacteria | bin_026_Chloroflexi | bin_027 | bin_028 | bin_029_Proteobacteria | bin_030_Verrucomicrobia | bin_031_Chloroflexi | bin_032_Bacteroidetes | bin_033_Ignavibacteriae | bin_034_Proteobacteria | bin_035 | bin_036_Proteobacteria | bin_037 | bin_038_Gemmatimonadetes | bin_039_Chloroflexi | bin_041_Chloroflexi | bin_042_Chloroflexi | bin_043 | bin_044 | bin_045_Proteobacteria | bin_046_Ignavibacteriae | bin_047_Proteobacteria | bin_048_Proteobacteria | bin_049_Ignavibacteriae | bin_050_Ignavibacteriae | bin_051 | bin_052 | bin_053 | bin_054 | bin_055 | bin_056_Proteobacteria | bin_057 | bin_058 | bin_059 | bin_060 | bin_061 | bin_062_Proteobacteria | bin_063 | bin_064_Actinobacteria | bin_065 | bin_066_Actinobacteria | bin_067_Ignavibacteriae | bin_068_Proteobacteria | bin_069_Bacteroidetes | bin_070_Ignavibacteriae | bin_071 | bin_072 | bin_073 | bin_074 | bin_075 | bin_076_Gemmatimonadetes | bin_077 | bin_078 | bin_079 | bin_080 | bin_081 | bin_082 | bin_083 | bin_084_Actinobacteria | bin_085 | bin_086_Bacteroidetes | bin_087_Proteobacteria | bin_088 | bin_089 | bin_090_Gemmatimonadetes | bin_091 | bin_092_Proteobacteria | bin_093 | bin_094 | bin_095 | bin_096_Actinobacteria | bin_097 | bin_098 | bin_099 | bin_100 | bin_101_Chlorobi | bin_102 | bin_103 | bin_104 | bin_105 | bin_106 | bin_107 | bin_108 | bin_109 | bin_110 | bin_111 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SAMPLE_BIOF3_01 | 0.00% | 19.96% | 14.86% | 4.81% | 6.80% | 2.95% | 2.76% | 2.36% | 1.91% | 0.68% | 2.41% | 2.66% | 0.20% | 1.19% | 0.80% | 1.96% | 0.20% | 1.00% | 2.33% | 0.60% | 0.89% | 0.56% | 0.44% | 0.16% | 0.45% | 0.77% | 1.14% | 0.44% | 0.39% | 1.39% | 2.01% | 0.33% | 0.27% | 0.28% | 0.23% | 0.15% | 0.27% | 0.20% | 0.20% | 0.52% | 0.21% | 0.14% | 0.19% | 0.11% | 0.23% | 0.26% | 0.25% | 0.07% | 0.13% | 0.21% | 0.19% | 0.12% | 0.38% | 0.10% | 0.23% | 0.15% | 0.19% | 0.18% | 0.27% | 0.22% | 0.07% | 0.51% | 0.20% | 0.12% | 0.59% | 0.12% | 0.92% | 0.14% | 0.13% | 0.19% | 0.07% | 0.07% | 0.28% | 0.26% | 0.47% | 0.17% | 0.43% | 0.10% | 0.19% | 0.37% | 0.63% | 0.36% | 0.23% | 0.28% | 0.26% | 0.12% | 0.29% | 0.04% | 0.26% | 0.19% | 0.48% | 0.03% | 0.49% | 0.19% | 0.20% | 0.27% | 0.41% | 0.09% | 0.27% | 0.23% | 0.58% | 0.19% | 0.03% | 0.40% | 0.33% | 0.18% | 0.32% | 0.24% | 0.17% | 0.40% | 0.61% | 0.21% | 0.27% |
SAMPLE_BIOF4_02 | 0.00% | 20.08% | 15.82% | 5.48% | 5.69% | 2.73% | 3.07% | 2.50% | 1.76% | 0.66% | 2.33% | 2.17% | 0.21% | 1.02% | 0.85% | 1.53% | 0.20% | 0.78% | 2.02% | 0.59% | 0.72% | 0.59% | 0.44% | 0.15% | 0.39% | 0.79% | 0.98% | 0.41% | 0.29% | 1.62% | 1.66% | 0.28% | 0.20% | 0.26% | 0.22% | 0.13% | 0.24% | 0.16% | 0.14% | 0.52% | 0.17% | 0.12% | 0.18% | 0.10% | 0.36% | 0.42% | 0.23% | 0.20% | 0.10% | 0.17% | 0.25% | 0.20% | 0.35% | 0.09% | 0.20% | 0.13% | 0.17% | 0.15% | 0.38% | 0.26% | 0.16% | 0.38% | 0.27% | 0.11% | 0.50% | 0.11% | 1.00% | 0.13% | 0.18% | 0.19% | 0.07% | 0.10% | 0.28% | 0.27% | 0.43% | 0.17% | 0.37% | 0.08% | 0.20% | 0.53% | 0.56% | 0.35% | 0.26% | 0.32% | 0.28% | 0.09% | 0.25% | 0.06% | 0.31% | 0.22% | 0.47% | 0.08% | 0.49% | 0.23% | 0.23% | 0.33% | 0.47% | 0.13% | 0.28% | 0.27% | 0.64% | 0.25% | 0.09% | 0.47% | 0.40% | 0.22% | 0.39% | 0.36% | 0.22% | 0.50% | 0.73% | 0.25% | 0.39% |
An overview of genes and functions based on the information found in the contigs database. If you haven't assigned any functions, these tables will only contain coverages of ORFs across samples.
Bin | Total Size | Num Genes Identified | Tabular data | |
---|---|---|---|---|
bin_000 | 64,811 | 🔗 genes | gene_coverages | detection | ||
bin_063 | 7,541 | 🔗 genes | gene_coverages | detection | ||
bin_038_Gemmatimonadetes | 4,528 | 🔗 genes | gene_coverages | detection | ||
bin_056_Proteobacteria | 5,425 | 🔗 genes | gene_coverages | detection | ||
bin_023_Proteobacteria | 4,556 | 🔗 genes | gene_coverages | detection | ||
bin_004_Proteobacteria | 3,757 | 🔗 genes | gene_coverages | detection | ||
bin_032_Bacteroidetes | 2,799 | 🔗 genes | gene_coverages | detection | ||
bin_064_Actinobacteria | 3,118 | 🔗 genes | gene_coverages | detection | ||
bin_045_Proteobacteria | 5,152 | 🔗 genes | gene_coverages | detection | ||
bin_062_Proteobacteria | 4,859 | 🔗 genes | gene_coverages | detection | ||
bin_048_Proteobacteria | 4,401 | 🔗 genes | gene_coverages | detection | ||
bin_047_Proteobacteria | 4,020 | 🔗 genes | gene_coverages | detection | ||
bin_009_Firmicutes | 4,074 | 🔗 genes | gene_coverages | detection | ||
bin_030_Verrucomicrobia | 3,338 | 🔗 genes | gene_coverages | detection | ||
bin_051 | 4,785 | 🔗 genes | gene_coverages | detection | ||
bin_003_Planctomycetes | 3,563 | 🔗 genes | gene_coverages | detection | ||
bin_075 | 7,145 | 🔗 genes | gene_coverages | detection | ||
bin_058 | 4,089 | 🔗 genes | gene_coverages | detection | ||
bin_031_Chloroflexi | 4,325 | 🔗 genes | gene_coverages | detection | ||
bin_016_Proteobacteria | 3,932 | 🔗 genes | gene_coverages | detection | ||
bin_049_Ignavibacteriae | 3,594 | 🔗 genes | gene_coverages | detection | ||
bin_020_Ignavibacteriae | 2,985 | 🔗 genes | gene_coverages | detection | ||
bin_010_Ignavibacteriae | 3,518 | 🔗 genes | gene_coverages | detection | ||
bin_037 | 3,963 | 🔗 genes | gene_coverages | detection | ||
bin_067_Ignavibacteriae | 3,107 | 🔗 genes | gene_coverages | detection | ||
bin_006_Proteobacteria | 3,376 | 🔗 genes | gene_coverages | detection | ||
bin_086_Bacteroidetes | 2,752 | 🔗 genes | gene_coverages | detection | ||
bin_013_mixed | 2,467 | 🔗 genes | gene_coverages | detection | ||
bin_029_Proteobacteria | 2,678 | 🔗 genes | gene_coverages | detection | ||
bin_014_Proteobacteria | 7,240 | 🔗 genes | gene_coverages | detection | ||
bin_053 | 5,423 | 🔗 genes | gene_coverages | detection | ||
bin_068_Proteobacteria | 4,417 | 🔗 genes | gene_coverages | detection | ||
bin_005_Chloroflexi | 3,597 | 🔗 genes | gene_coverages | detection | ||
bin_026_Chloroflexi | 3,158 | 🔗 genes | gene_coverages | detection | ||
bin_007_Acidobacteria | 3,059 | 🔗 genes | gene_coverages | detection | ||
bin_101_Chlorobi | 2,808 | 🔗 genes | gene_coverages | detection | ||
bin_059 | 2,699 | 🔗 genes | gene_coverages | detection | ||
bin_050_Ignavibacteriae | 2,594 | 🔗 genes | gene_coverages | detection | ||
bin_090_Gemmatimonadetes | 2,324 | 🔗 genes | gene_coverages | detection | ||
bin_096_Actinobacteria | 2,322 | 🔗 genes | gene_coverages | detection | ||
bin_072 | 7,704 | 🔗 genes | gene_coverages | detection | ||
bin_102 | 7,980 | 🔗 genes | gene_coverages | detection | ||
bin_087_Proteobacteria | 5,872 | 🔗 genes | gene_coverages | detection | ||
bin_036_Proteobacteria | 4,401 | 🔗 genes | gene_coverages | detection | ||
bin_012_Verrucomicrobia | 3,701 | 🔗 genes | gene_coverages | detection | ||
bin_041_Chloroflexi | 3,909 | 🔗 genes | gene_coverages | detection | ||
bin_070_Ignavibacteriae | 3,037 | 🔗 genes | gene_coverages | detection | ||
bin_001_Chloroflexi | 3,344 | 🔗 genes | gene_coverages | detection | ||
bin_022_Armatimonadetes | 2,897 | 🔗 genes | gene_coverages | detection | ||
bin_018_Bacteroidetes | 2,715 | 🔗 genes | gene_coverages | detection | ||
bin_069_Bacteroidetes | 2,642 | 🔗 genes | gene_coverages | detection | ||
bin_060 | 8,654 | 🔗 genes | gene_coverages | detection | ||
bin_071 | 5,784 | 🔗 genes | gene_coverages | detection | ||
bin_035 | 3,505 | 🔗 genes | gene_coverages | detection | ||
bin_025_Proteobacteria | 3,505 | 🔗 genes | gene_coverages | detection | ||
bin_092_Proteobacteria | 3,737 | 🔗 genes | gene_coverages | detection | ||
bin_039_Chloroflexi | 2,694 | 🔗 genes | gene_coverages | detection | ||
bin_091 | 7,765 | 🔗 genes | gene_coverages | detection | ||
bin_019_Proteobacteria | 4,052 | 🔗 genes | gene_coverages | detection | ||
bin_066_Actinobacteria | 2,965 | 🔗 genes | gene_coverages | detection | ||
bin_034_Proteobacteria | 2,573 | 🔗 genes | gene_coverages | detection | ||
bin_084_Actinobacteria | 2,377 | 🔗 genes | gene_coverages | detection | ||
bin_095 | 6,751 | 🔗 genes | gene_coverages | detection | ||
bin_042_Chloroflexi | 3,190 | 🔗 genes | gene_coverages | detection | ||
bin_076_Gemmatimonadetes | 2,104 | 🔗 genes | gene_coverages | detection | ||
bin_021 | 2,548 | 🔗 genes | gene_coverages | detection | ||
bin_052 | 3,354 | 🔗 genes | gene_coverages | detection | ||
bin_017 | 2,947 | 🔗 genes | gene_coverages | detection | ||
bin_046_Ignavibacteriae | 2,164 | 🔗 genes | gene_coverages | detection | ||
bin_065 | 7,849 | 🔗 genes | gene_coverages | detection | ||
bin_024 | 3,671 | 🔗 genes | gene_coverages | detection | ||
bin_002_Unknown | 1,702 | 🔗 genes | gene_coverages | detection | ||
bin_109 | 10,890 | 🔗 genes | gene_coverages | detection | ||
bin_082 | 6,304 | 🔗 genes | gene_coverages | detection | ||
bin_033_Ignavibacteriae | 2,375 | 🔗 genes | gene_coverages | detection | ||
bin_027 | 2,950 | 🔗 genes | gene_coverages | detection | ||
bin_103 | 5,059 | 🔗 genes | gene_coverages | detection | ||
bin_057 | 2,843 | 🔗 genes | gene_coverages | detection | ||
bin_028 | 7,180 | 🔗 genes | gene_coverages | detection | ||
bin_079 | 7,241 | 🔗 genes | gene_coverages | detection | ||
bin_081 | 5,984 | 🔗 genes | gene_coverages | detection | ||
bin_077 | 4,513 | 🔗 genes | gene_coverages | detection | ||
bin_083 | 5,810 | 🔗 genes | gene_coverages | detection | ||
bin_089 | 4,322 | 🔗 genes | gene_coverages | detection | ||
bin_111 | 5,132 | 🔗 genes | gene_coverages | detection | ||
bin_106 | 3,901 | 🔗 genes | gene_coverages | detection | ||
bin_074 | 4,095 | 🔗 genes | gene_coverages | detection | ||
bin_100 | 3,545 | 🔗 genes | gene_coverages | detection | ||
bin_094 | 6,118 | 🔗 genes | gene_coverages | detection | ||
bin_080 | 4,030 | 🔗 genes | gene_coverages | detection | ||
bin_043 | 2,989 | 🔗 genes | gene_coverages | detection | ||
bin_093 | 3,124 | 🔗 genes | gene_coverages | detection | ||
bin_105 | 5,246 | 🔗 genes | gene_coverages | detection | ||
bin_110 | 3,782 | 🔗 genes | gene_coverages | detection | ||
bin_061 | 1,976 | 🔗 genes | gene_coverages | detection | ||
bin_108 | 6,652 | 🔗 genes | gene_coverages | detection | ||
bin_085 | 3,798 | 🔗 genes | gene_coverages | detection | ||
bin_107 | 2,823 | 🔗 genes | gene_coverages | detection | ||
bin_054 | 2,884 | 🔗 genes | gene_coverages | detection | ||
bin_099 | 8,725 | 🔗 genes | gene_coverages | detection | ||
bin_008_Planctomycetes | 1,138 | 🔗 genes | gene_coverages | detection | ||
bin_104 | 3,143 | 🔗 genes | gene_coverages | detection | ||
bin_088 | 3,216 | 🔗 genes | gene_coverages | detection | ||
bin_097 | 3,791 | 🔗 genes | gene_coverages | detection | ||
bin_044 | 4,126 | 🔗 genes | gene_coverages | detection | ||
bin_098 | 4,010 | 🔗 genes | gene_coverages | detection | ||
bin_055 | 3,335 | 🔗 genes | gene_coverages | detection | ||
bin_073 | 3,553 | 🔗 genes | gene_coverages | detection | ||
bin_078 | 3,168 | 🔗 genes | gene_coverages | detection | ||
bin_021_rest | 746 | 🔗 genes | gene_coverages | detection | ||
bin_011 | 251 | 🔗 genes | gene_coverages | detection | ||
bin_015 | 261 | 🔗 genes | gene_coverages | detection |
This panel shows you the result of non-single copy gene hits in your bins and contigs for each HMM profile. Here is a table that shows the total number of HMM hits in each bin for each HMM search type (from bins_across_samples/hmm_hit_totals.txt):
Bin | Ribosomal_RNAs | |
---|---|---|
bin_000 | 66 | |
bin_063 | None | |
bin_038_Gemmatimonadetes | None | |
bin_056_Proteobacteria | None | |
bin_023_Proteobacteria | None | |
bin_004_Proteobacteria | 1 | |
bin_032_Bacteroidetes | 3 | |
bin_064_Actinobacteria | None | |
bin_045_Proteobacteria | None | |
bin_062_Proteobacteria | 1 | |
bin_048_Proteobacteria | None | |
bin_047_Proteobacteria | None | |
bin_009_Firmicutes | 1 | |
bin_030_Verrucomicrobia | None | |
bin_051 | None | |
bin_003_Planctomycetes | 2 | |
bin_075 | None | |
bin_058 | None | |
bin_031_Chloroflexi | None | |
bin_016_Proteobacteria | None | |
bin_049_Ignavibacteriae | None | |
bin_020_Ignavibacteriae | None | |
bin_010_Ignavibacteriae | 1 | |
bin_037 | 2 | |
bin_067_Ignavibacteriae | None | |
bin_006_Proteobacteria | None | |
bin_086_Bacteroidetes | 2 | |
bin_013_mixed | 2 | |
bin_029_Proteobacteria | None | |
bin_014_Proteobacteria | None | |
bin_053 | None | |
bin_068_Proteobacteria | None | |
bin_005_Chloroflexi | 2 | |
bin_026_Chloroflexi | 2 | |
bin_007_Acidobacteria | 2 | |
bin_101_Chlorobi | 1 | |
bin_059 | 2 | |
bin_050_Ignavibacteriae | None | |
bin_090_Gemmatimonadetes | None | |
bin_096_Actinobacteria | None | |
bin_072 | 1 | |
bin_102 | None | |
bin_087_Proteobacteria | None | |
bin_036_Proteobacteria | None | |
bin_012_Verrucomicrobia | 1 | |
bin_041_Chloroflexi | None | |
bin_070_Ignavibacteriae | None | |
bin_001_Chloroflexi | 1 | |
bin_022_Armatimonadetes | 2 | |
bin_018_Bacteroidetes | 2 | |
bin_069_Bacteroidetes | 1 | |
bin_060 | 5 | |
bin_071 | 1 | |
bin_035 | None | |
bin_025_Proteobacteria | None | |
bin_092_Proteobacteria | None | |
bin_039_Chloroflexi | 1 | |
bin_091 | 2 | |
bin_019_Proteobacteria | None | |
bin_066_Actinobacteria | None | |
bin_034_Proteobacteria | None | |
bin_084_Actinobacteria | None | |
bin_095 | 1 | |
bin_042_Chloroflexi | None | |
bin_076_Gemmatimonadetes | None | |
bin_021 | None | |
bin_052 | None | |
bin_017 | None | |
bin_046_Ignavibacteriae | 1 | |
bin_065 | 14 | |
bin_024 | None | |
bin_002_Unknown | 2 | |
bin_109 | 1 | |
bin_082 | None | |
bin_033_Ignavibacteriae | None | |
bin_027 | 2 | |
bin_103 | None | |
bin_057 | None | |
bin_028 | None | |
bin_079 | None | |
bin_081 | 1 | |
bin_077 | None | |
bin_083 | None | |
bin_089 | None | |
bin_111 | None | |
bin_106 | None | |
bin_074 | None | |
bin_100 | None | |
bin_094 | None | |
bin_080 | None | |
bin_043 | 2 | |
bin_093 | None | |
bin_105 | None | |
bin_110 | None | |
bin_061 | None | |
bin_108 | None | |
bin_085 | None | |
bin_107 | None | |
bin_054 | None | |
bin_099 | None | |
bin_008_Planctomycetes | None | |
bin_104 | None | |
bin_088 | None | |
bin_097 | None | |
bin_044 | None | |
bin_098 | 3 | |
bin_055 | None | |
bin_073 | None | |
bin_078 | 1 | |
bin_021_rest | 3 | |
bin_011 | None | |
bin_015 | 8 |
The distribution of each HMM item found in your HMM collections is shown below. Different search types will be presented in their cognate tabs.
HMM hits in bins for Ribosomal_RNAs (from bins_across_samples/hmms_Ribosomal_RNAs.txt):
Bin | Archa ... | Archa ... | Archa ... | Archa ... | Bacte ... | Bacte ... | Bacte ... | Eukar ... | Eukar ... | Eukar ... | ... | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
bin_000 | 4 | 24 | None | None | 11 | 26 | None | 1 | None | None | ... | |
bin_063 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_038_Gemmatimonadetes | None | None | None | None | None | None | None | None | None | None | ... | |
bin_056_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_023_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_004_Proteobacteria | None | None | None | None | None | 1 | None | None | None | None | ... | |
bin_032_Bacteroidetes | None | 1 | None | None | 1 | 1 | None | None | None | None | ... | |
bin_064_Actinobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_045_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_062_Proteobacteria | None | None | None | None | None | 1 | None | None | None | None | ... | |
bin_048_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_047_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_009_Firmicutes | None | None | None | None | 1 | None | None | None | None | None | ... | |
bin_030_Verrucomicrobia | None | None | None | None | None | None | None | None | None | None | ... | |
bin_051 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_003_Planctomycetes | 1 | 1 | None | None | None | None | None | None | None | None | ... | |
bin_075 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_058 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_031_Chloroflexi | None | None | None | None | None | None | None | None | None | None | ... | |
bin_016_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_049_Ignavibacteriae | None | None | None | None | None | None | None | None | None | None | ... | |
bin_020_Ignavibacteriae | None | None | None | None | None | None | None | None | None | None | ... | |
bin_010_Ignavibacteriae | None | None | None | None | None | 1 | None | None | None | None | ... | |
bin_037 | 1 | 1 | None | None | None | None | None | None | None | None | ... | |
bin_067_Ignavibacteriae | None | None | None | None | None | None | None | None | None | None | ... | |
bin_006_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_086_Bacteroidetes | None | 1 | None | None | 1 | None | None | None | None | None | ... | |
bin_013_mixed | 1 | 1 | None | None | None | None | None | None | None | None | ... | |
bin_029_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_014_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_053 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_068_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_005_Chloroflexi | None | 1 | None | None | 1 | None | None | None | None | None | ... | |
bin_026_Chloroflexi | None | 1 | None | None | 1 | None | None | None | None | None | ... | |
bin_007_Acidobacteria | None | 1 | None | None | 1 | None | None | None | None | None | ... | |
bin_101_Chlorobi | None | None | None | None | 1 | None | None | None | None | None | ... | |
bin_059 | 1 | 1 | None | None | None | None | None | None | None | None | ... | |
bin_050_Ignavibacteriae | None | None | None | None | None | None | None | None | None | None | ... | |
bin_090_Gemmatimonadetes | None | None | None | None | None | None | None | None | None | None | ... | |
bin_096_Actinobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_072 | None | None | None | None | None | 1 | None | None | None | None | ... | |
bin_102 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_087_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_036_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_012_Verrucomicrobia | None | None | None | None | 1 | None | None | None | None | None | ... | |
bin_041_Chloroflexi | None | None | None | None | None | None | None | None | None | None | ... | |
bin_070_Ignavibacteriae | None | None | None | None | None | None | None | None | None | None | ... | |
bin_001_Chloroflexi | None | 1 | None | None | None | None | None | None | None | None | ... | |
bin_022_Armatimonadetes | None | 1 | None | None | 1 | None | None | None | None | None | ... | |
bin_018_Bacteroidetes | None | 1 | None | None | 1 | None | None | None | None | None | ... | |
bin_069_Bacteroidetes | None | 1 | None | None | None | None | None | None | None | None | ... | |
bin_060 | None | None | None | None | 2 | 3 | None | None | None | None | ... | |
bin_071 | None | None | None | None | None | 1 | None | None | None | None | ... | |
bin_035 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_025_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_092_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_039_Chloroflexi | 1 | None | None | None | None | None | None | None | None | None | ... | |
bin_091 | None | None | None | None | None | None | None | 2 | None | None | ... | |
bin_019_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_066_Actinobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_034_Proteobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_084_Actinobacteria | None | None | None | None | None | None | None | None | None | None | ... | |
bin_095 | None | None | None | None | None | 1 | None | None | None | None | ... | |
bin_042_Chloroflexi | None | None | None | None | None | None | None | None | None | None | ... | |
bin_076_Gemmatimonadetes | None | None | None | None | None | None | None | None | None | None | ... | |
bin_021 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_052 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_017 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_046_Ignavibacteriae | None | None | None | None | 1 | None | None | None | None | None | ... | |
bin_065 | None | 2 | None | None | 5 | 4 | None | 3 | None | None | ... | |
bin_024 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_002_Unknown | None | None | None | None | 1 | 1 | None | None | None | None | ... | |
bin_109 | None | None | None | None | None | 1 | None | None | None | None | ... | |
bin_082 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_033_Ignavibacteriae | None | None | None | None | None | None | None | None | None | None | ... | |
bin_027 | None | 1 | None | None | None | 1 | None | None | None | None | ... | |
bin_103 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_057 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_028 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_079 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_081 | None | None | None | None | None | 1 | None | None | None | None | ... | |
bin_077 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_083 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_089 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_111 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_106 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_074 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_100 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_094 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_080 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_043 | 1 | 1 | None | None | None | None | None | None | None | None | ... | |
bin_093 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_105 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_110 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_061 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_108 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_085 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_107 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_054 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_099 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_008_Planctomycetes | None | None | None | None | None | None | None | None | None | None | ... | |
bin_104 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_088 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_097 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_044 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_098 | None | None | None | None | 1 | 2 | None | None | None | None | ... | |
bin_055 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_073 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_078 | None | 1 | None | None | None | None | None | None | None | None | ... | |
bin_021_rest | None | None | None | None | 1 | 2 | None | None | None | None | ... | |
bin_011 | None | None | None | None | None | None | None | None | None | None | ... | |
bin_015 | None | None | None | None | 3 | 5 | None | None | None | None | ... |
For layers
The directory misc data layers contains TAB-delimited files for additional data stored under the following data group names for each sample/layer found in the merged database: default.
The default data group, which often is added by anvi'o automatically and contains important information, contained these keys: num_SNVs_reported, total_reads_mapped.
For items
None found :(