Trinity_ID uninfected_cold infected_cold uninfected_warm infected_warm baseMean log2FoldChange lfcSE stat pvalue padj cluster V2 uniprot_acc_ID V4 V5 V6 V7 V8.x V9.x V10.x V11.x V12 V13 V14 entry_name review_status protein_name gene_name organism length V8.y V9.y V10.y V11.y gene_ontology_IDs TRINITY_DN83943_c0_g1_i4 0 322 18 355 173.628955 6.337655582 1.13506748 5.583505558 2.36e-08 5.58e-05 1 sp Q99L47 F10A1_MOUSE 50.2 239 115 1 36 740 1 239 1.6e-47 192.6 F10A1_MOUSE reviewed Hsc70-interacting protein (Hip) (Protein FAM10A1) (Protein ST13 homolog) St13 Fam10a1 Hip Mus musculus (Mouse) 371 chaperone cofactor-dependent protein refolding [GO:0070389]; negative regulation of protein refolding [GO:0061084]; protein homooligomerization [GO:0051260] cytosol [GO:0005829]; extracellular exosome [GO:0070062]; protein complex [GO:0043234] chaperone binding [GO:0051087]; dATP binding [GO:0032564]; Hsp70 protein binding [GO:0030544]; identical protein binding [GO:0042802]; protein complex binding [GO:0032403]; protein dimerization activity [GO:0046983]; protein domain specific binding [GO:0019904]; unfolded protein binding [GO:0051082] cytosol [GO:0005829]; extracellular exosome [GO:0070062]; protein complex [GO:0043234]; chaperone binding [GO:0051087]; dATP binding [GO:0032564]; Hsp70 protein binding [GO:0030544]; identical protein binding [GO:0042802]; protein complex binding [GO:0032403]; protein dimerization activity [GO:0046983]; protein domain specific binding [GO:0019904]; unfolded protein binding [GO:0051082]; chaperone cofactor-dependent protein refolding [GO:0070389]; negative regulation of protein refolding [GO:0061084]; protein homooligomerization [GO:0051260] GO:0005829; GO:0019904; GO:0030544; GO:0032403; GO:0032564; GO:0042802; GO:0043234; GO:0046983; GO:0051082; GO:0051087; GO:0051260; GO:0061084; GO:0070062; GO:0070389 TRINITY_DN7721_c0_g2_i1 0 39 0 87 30.54890757 8.381214665 2.447986011 3.423718366 0.000617706 0.038703367 1 sp Q5I0G4 GARS_RAT 45.2 633 326 8 106 1986 96 713 1e-155 552 GARS_RAT reviewed Glycine--tRNA ligase (EC 3.6.1.17) (EC 6.1.1.14) (Diadenosine tetraphosphate synthetase) (AP-4-A synthetase) (Glycyl-tRNA synthetase) (GlyRS) (Fragment) Gars Rattus norvegicus (Rat) 637 diadenosine tetraphosphate biosynthetic process [GO:0015966]; mitochondrial glycyl-tRNA aminoacylation [GO:0070150] axon [GO:0030424]; extracellular exosome [GO:0070062]; mitochondrion [GO:0005739] ATP binding [GO:0005524]; bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity [GO:0004081]; glycine-tRNA ligase activity [GO:0004820]; protein dimerization activity [GO:0046983] axon [GO:0030424]; extracellular exosome [GO:0070062]; mitochondrion [GO:0005739]; ATP binding [GO:0005524]; bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity [GO:0004081]; glycine-tRNA ligase activity [GO:0004820]; protein dimerization activity [GO:0046983]; diadenosine tetraphosphate biosynthetic process [GO:0015966]; mitochondrial glycyl-tRNA aminoacylation [GO:0070150] GO:0004081; GO:0004820; GO:0005524; GO:0005739; GO:0015966; GO:0030424; GO:0046983; GO:0070062; GO:0070150 TRINITY_DN4517_c0_g1_i3 0 89 0 71 40.74863683 8.817579351 2.240947016 3.934755836 8.33e-05 0.010312842 1 sp Q6NRI1 ZNT7B_XENLA 53.3 394 138 2 373 1428 1 390 5.7e-97 357.5 ZNT7B_XENLA reviewed Zinc transporter 7-B (ZnT-7-B) (Solute carrier family 30 member 7-B) slc30a7-b znt7-b Xenopus laevis (African clawed frog) 390 zinc II ion transport [GO:0006829] Golgi apparatus [GO:0005794]; integral component of membrane [GO:0016021] cation transmembrane transporter activity [GO:0008324] Golgi apparatus [GO:0005794]; integral component of membrane [GO:0016021]; cation transmembrane transporter activity [GO:0008324]; zinc II ion transport [GO:0006829] GO:0005794; GO:0006829; GO:0008324; GO:0016021 TRINITY_DN8440_c0_g1_i1 0 54 0 190 58.09151835 9.185781624 2.042887386 4.496469892 6.91e-06 0.002315106 1 sp Q9SHG6 STIP1_ARATH 31.2 202 122 5 365 955 192 381 1.2e-12 76.6 STIP1_ARATH reviewed Septin and tuftelin-interacting protein 1 homolog 1 (Nineteen complex-related protein 1 homolog) (AtNTR1) (Protein SPLICEOSOMAL TIMEKEEPER LOCUS 1) STIPL1 NTR1 At1g17070 F20D23.23 Arabidopsis thaliana (Mouse-ear cress) 849 mRNA splicing, via spliceosome [GO:0000398]; regulation of circadian rhythm [GO:0042752]; regulation of transcription, DNA-templated [GO:0006355]; spliceosomal complex disassembly [GO:0000390] nuclear lumen [GO:0031981]; U2-type post-mRNA release spliceosomal complex [GO:0071008] DNA binding [GO:0003677]; U1 snRNP binding [GO:1990446] nuclear lumen [GO:0031981]; U2-type post-mRNA release spliceosomal complex [GO:0071008]; DNA binding [GO:0003677]; U1 snRNP binding [GO:1990446]; mRNA splicing, via spliceosome [GO:0000398]; regulation of circadian rhythm [GO:0042752]; regulation of transcription, DNA-templated [GO:0006355]; spliceosomal complex disassembly [GO:0000390] GO:0000390; GO:0000398; GO:0003677; GO:0006355; GO:0031981; GO:0042752; GO:0071008; GO:1990446 TRINITY_DN22802_c0_g1_i1 0 45 0 134 42.88320247 8.801894834 2.211290962 3.98043269 6.88e-05 0.009044179 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN13344_c0_g1_i1 0 43 0 101 34.83515988 8.559740496 2.349419406 3.643342894 0.00026912 0.021712067 1 sp Q9FPS4 UBP23_ARATH 34.5 177 94 7 159 635 108 280 3.1e-12 75.1 UBP23_ARATH reviewed Ubiquitin carboxyl-terminal hydrolase 23 (EC 3.4.19.12) (Deubiquitinating enzyme 23) (AtUBP23) (Ubiquitin thioesterase 23) (Ubiquitin-specific-processing protease 23) UBP23 At5g57990 MTI20.25 Arabidopsis thaliana (Mouse-ear cress) 859 protein deubiquitination [GO:0016579]; ubiquitin-dependent protein catabolic process [GO:0006511] thiol-dependent ubiquitinyl hydrolase activity [GO:0036459] thiol-dependent ubiquitinyl hydrolase activity [GO:0036459]; protein deubiquitination [GO:0016579]; ubiquitin-dependent protein catabolic process [GO:0006511] GO:0006511; GO:0016579; GO:0036459 TRINITY_DN46552_c0_g1_i4 0 41 0 85 30.64802419 8.398202918 2.445175726 3.434600969 0.000593427 0.037617264 1 sp Q9TZM3 LRK1_CAEEL 32.4 2433 1185 61 641 7735 351 2391 0 1086.2 LRK1_CAEEL reviewed Leucine-rich repeat serine/threonine-protein kinase 1 (EC 2.7.11.1) (Leucine-rich repeats, ras-like domain, kinase protein 1) (PARK8-related kinase) lrk-1 T27C10.6 Caenorhabditis elegans 2393 axon extension involved in axon guidance [GO:0048846]; cellular protein localization [GO:0034613]; intracellular signal transduction [GO:0035556]; negative regulation of neuron death [GO:1901215]; response to endoplasmic reticulum stress [GO:0034976]; response to oxidative stress [GO:0006979]; small GTPase mediated signal transduction [GO:0007264]; synaptic vesicle transport [GO:0048489] cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]; neuronal cell body [GO:0043025]; synapse [GO:0045202] ATP binding [GO:0005524]; GTP binding [GO:0005525]; metal ion binding [GO:0046872]; protein serine/threonine kinase activity [GO:0004674]; signal transducer activity [GO:0004871] cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]; neuronal cell body [GO:0043025]; synapse [GO:0045202]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; metal ion binding [GO:0046872]; protein serine/threonine kinase activity [GO:0004674]; signal transducer activity [GO:0004871]; axon extension involved in axon guidance [GO:0048846]; cellular protein localization [GO:0034613]; intracellular signal transduction [GO:0035556]; negative regulation of neuron death [GO:1901215]; response to endoplasmic reticulum stress [GO:0034976]; response to oxidative stress [GO:0006979]; small GTPase mediated signal transduction [GO:0007264]; synaptic vesicle transport [GO:0048489] GO:0004674; GO:0004871; GO:0005524; GO:0005525; GO:0005737; GO:0005794; GO:0006979; GO:0007264; GO:0034613; GO:0034976; GO:0035556; GO:0043025; GO:0045202; GO:0046872; GO:0048489; GO:0048846; GO:1901215 TRINITY_DN6754_c0_g1_i2 0 62 0 134 47.58660063 9.02272813 2.147230392 4.202030749 2.65e-05 0.004899348 1 sp Q8R3Q2 PP6R2_MOUSE 21.3 470 289 13 210 1562 20 427 1.5e-18 96.7 PP6R2_MOUSE reviewed Serine/threonine-protein phosphatase 6 regulatory subunit 2 (SAPS domain family member 2) Ppp6r2 Kiaa0685 Pp6r2 Saps2 Mus musculus (Mouse) 923 regulation of phosphoprotein phosphatase activity [GO:0043666] cytosol [GO:0005829]; intracellular membrane-bounded organelle [GO:0043231] protein phosphatase binding [GO:0019903] cytosol [GO:0005829]; intracellular membrane-bounded organelle [GO:0043231]; protein phosphatase binding [GO:0019903]; regulation of phosphoprotein phosphatase activity [GO:0043666] GO:0005829; GO:0019903; GO:0043231; GO:0043666 TRINITY_DN2093_c0_g1_i6 0 98 2 57 40.49423852 6.678816258 2.009802716 3.323120326 0.000890165 0.04772315 1 sp P0C5P9 YL54B_YEAST 81.2 32 6 0 386 291 21 52 1e-06 55.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2779_c0_g1_i9 82 490 48 276 230.4453908 2.612981975 0.710991027 3.675126515 0.000237732 0.020417117 1 sp Q9QX67 DAP1_RAT 35 117 55 4 105 437 1 102 3.9e-06 55.8 DAP1_RAT reviewed Death-associated protein 1 (DAP-1) (Rap7a) Dap Rap7a Rattus norvegicus (Rat) 102 apoptotic signaling pathway [GO:0097190]; autophagy [GO:0006914]; cellular response to amino acid starvation [GO:0034198]; negative regulation of autophagy [GO:0010507] death domain binding [GO:0070513] death domain binding [GO:0070513]; apoptotic signaling pathway [GO:0097190]; autophagy [GO:0006914]; cellular response to amino acid starvation [GO:0034198]; negative regulation of autophagy [GO:0010507] GO:0006914; GO:0010507; GO:0034198; GO:0070513; GO:0097190 TRINITY_DN4589_c0_g2_i1 0 41 0 75 28.37690248 8.304912791 2.506718962 3.313060983 0.000922809 0.048650742 1 sp Q9H9B1 EHMT1_HUMAN 30 210 108 6 617 1237 776 949 7.4e-11 70.5 EHMT1_HUMAN reviewed Histone-lysine N-methyltransferase EHMT1 (EC 2.1.1.-) (EC 2.1.1.43) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP) (GLP1) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Lysine N-methyltransferase 1D) EHMT1 EUHMTASE1 GLP KIAA1876 KMT1D Homo sapiens (Human) 1298 chromatin organization [GO:0006325]; DNA methylation [GO:0006306]; embryo development [GO:0009790]; histone methylation [GO:0016571]; negative regulation of transcription, DNA-templated [GO:0045892]; negative regulation of transcription from RNA polymerase II promoter [GO:0000122]; peptidyl-lysine dimethylation [GO:0018027]; peptidyl-lysine monomethylation [GO:0018026]; regulation of signal transduction by p53 class mediator [GO:1901796]; response to fungicide [GO:0060992] chromosome [GO:0005694]; nuclear body [GO:0016604]; nucleoplasm [GO:0005654]; nucleus [GO:0005634] C2H2 zinc finger domain binding [GO:0070742]; histone-lysine N-methyltransferase activity [GO:0018024]; histone methyltransferase activity (H3-K27 specific) [GO:0046976]; histone methyltransferase activity (H3-K9 specific) [GO:0046974]; methyltransferase activity [GO:0008168]; p53 binding [GO:0002039]; protein-lysine N-methyltransferase activity [GO:0016279]; zinc ion binding [GO:0008270] chromosome [GO:0005694]; nuclear body [GO:0016604]; nucleoplasm [GO:0005654]; nucleus [GO:0005634]; C2H2 zinc finger domain binding [GO:0070742]; histone methyltransferase activity (H3-K27 specific) [GO:0046976]; histone methyltransferase activity (H3-K9 specific) [GO:0046974]; histone-lysine N-methyltransferase activity [GO:0018024]; methyltransferase activity [GO:0008168]; p53 binding [GO:0002039]; protein-lysine N-methyltransferase activity [GO:0016279]; zinc ion binding [GO:0008270]; chromatin organization [GO:0006325]; DNA methylation [GO:0006306]; embryo development [GO:0009790]; histone methylation [GO:0016571]; negative regulation of transcription from RNA polymerase II promoter [GO:0000122]; negative regulation of transcription, DNA-templated [GO:0045892]; peptidyl-lysine dimethylation [GO:0018027]; peptidyl-lysine monomethylation [GO:0018026]; regulation of signal transduction by p53 class mediator [GO:1901796]; response to fungicide [GO:0060992] GO:0000122; GO:0002039; GO:0005634; GO:0005654; GO:0005694; GO:0006306; GO:0006325; GO:0008168; GO:0008270; GO:0009790; GO:0016279; GO:0016571; GO:0016604; GO:0018024; GO:0018026; GO:0018027; GO:0045892; GO:0046974; GO:0046976; GO:0060992; GO:0070742; GO:1901796 TRINITY_DN29262_c0_g1_i1 0 35 0 103 33.07602038 8.434407256 2.388509623 3.531242736 0.000413612 0.029122756 1 sp Q28DS0 SAE1_XENTR 33.8 201 117 4 47 607 9 207 9.8e-20 99 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN11078_c0_g1_i6 0 38 0 230 62.7492775 9.088881147 2.011172458 4.519195314 6.21e-06 0.002201189 1 sp Q5E988 RS5_BOVIN 71.2 198 48 2 147 740 16 204 7.7e-73 275.4 RS5_BOVIN reviewed 40S ribosomal protein S5 [Cleaved into: 40S ribosomal protein S5, N-terminally processed] RPS5 Bos taurus (Bovine) 204 regulation of translational fidelity [GO:0006450]; ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412] cytosolic small ribosomal subunit [GO:0022627]; extracellular exosome [GO:0070062]; extracellular matrix [GO:0031012]; focal adhesion [GO:0005925]; membrane [GO:0016020] mRNA binding [GO:0003729]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735] cytosolic small ribosomal subunit [GO:0022627]; extracellular exosome [GO:0070062]; extracellular matrix [GO:0031012]; focal adhesion [GO:0005925]; membrane [GO:0016020]; mRNA binding [GO:0003729]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]; regulation of translational fidelity [GO:0006450]; ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412] GO:0000028; GO:0003729; GO:0003735; GO:0005925; GO:0006412; GO:0006450; GO:0016020; GO:0019843; GO:0022627; GO:0031012; GO:0070062 TRINITY_DN336_c0_g1_i6 0 82 0 55 35.17814874 8.576363982 2.341233616 3.663181634 0.000249102 0.020970825 1 sp P90519 EF1A_CRYPV 43.9 469 229 7 48 1454 1 435 4.9e-102 373.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN225_c0_g1_i18 0 22 0 153 40.83491267 8.427322188 2.250634089 3.744421285 0.00018081 0.017953944 1 sp Q9H361 PABP3_HUMAN 28.9 374 203 11 714 1757 71 407 1.2e-29 133.3 PABP3_HUMAN reviewed Polyadenylate-binding protein 3 (PABP-3) (Poly(A)-binding protein 3) (Testis-specific poly(A)-binding protein) PABPC3 PABP3 PABPL3 Homo sapiens (Human) 631 mRNA metabolic process [GO:0016071] cytoplasm [GO:0005737]; cytosol [GO:0005829]; extracellular exosome [GO:0070062] poly(A) binding [GO:0008143] cytoplasm [GO:0005737]; cytosol [GO:0005829]; extracellular exosome [GO:0070062]; poly(A) binding [GO:0008143]; mRNA metabolic process [GO:0016071] GO:0005737; GO:0005829; GO:0008143; GO:0016071; GO:0070062 TRINITY_DN1470_c0_g1_i10 152 1 89 0 59.9584681 -7.91769923 1.900226051 -4.16671439 3.09e-05 0.005304145 2 sp O97172 U729_DROME 39.8 83 40 2 237 479 1 75 9.8e-10 68.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1667_c0_g1_i15 0 44 0 101 35.11183036 8.575527645 2.343644184 3.659056995 0.000253145 0.020989914 1 sp P0A9Y8 CSPC_ECO57 63.4 71 24 2 64 276 1 69 1.1e-16 89 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN8869_c0_g1_i3 0 38 0 80 28.68245189 8.300613241 2.498351601 3.322435976 0.000892351 0.04772315 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN11898_c1_g1_i8 0 23 0 109 31.11864764 8.199588448 2.438646745 3.362351872 0.000772816 0.043777136 1 sp Q6AZT7 NPHP3_XENLA 28.4 162 116 0 3303 3788 1079 1240 8.1e-12 75.1 NPHP3_XENLA reviewed Nephrocystin-3 nphp3 Xenopus laevis (African clawed frog) 1300 cilium assembly [GO:0060271]; convergent extension involved in gastrulation [GO:0060027]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; regulation of Wnt signaling pathway, planar cell polarity pathway [GO:2000095]; Wnt signaling pathway [GO:0016055] cilium [GO:0005929] cilium [GO:0005929]; cilium assembly [GO:0060271]; convergent extension involved in gastrulation [GO:0060027]; negative regulation of canonical Wnt signaling pathway [GO:0090090]; regulation of Wnt signaling pathway, planar cell polarity pathway [GO:2000095]; Wnt signaling pathway [GO:0016055] GO:0005929; GO:0016055; GO:0060027; GO:0060271; GO:0090090; GO:2000095 TRINITY_DN246_c0_g2_i1 0 49 0 97 35.58673407 8.619788528 2.333507201 3.693919832 0.000220823 0.019904877 1 sp P18101 RL40_DROME 90.6 128 12 0 40 423 1 128 3.5e-61 236.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN932_c1_g1_i21 241 24 48 0 81.00891298 -4.761167443 1.412626029 -3.370437289 0.00075049 0.043176317 2 sp Q4R562 ARRB1_MACFA 61.9 415 130 4 272 1516 4 390 6.1e-142 507.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN13897_c0_g1_i1 0 41 0 80 29.51246333 8.352979527 2.474956476 3.375000574 0.000738155 0.042851867 1 sp Q4E123 MTR1_TRYCC 31.3 335 194 9 137 1096 46 359 1.2e-30 136 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN713_c0_g1_i26 310 23 112 0 112.9589768 -5.371237056 1.253776662 -4.284046129 1.84e-05 0.003870194 2 sp A4Z943 ZBED5_BOVIN 35.5 557 319 10 552 2144 152 694 1.2e-88 331.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN5457_c0_g2_i1 0 37 0 190 53.38812019 8.929851501 2.089913152 4.272833774 1.93e-05 0.003952692 1 sp Q84M24 AB1A_ARATH 26.5 1791 1023 55 1102 5961 211 1879 4.4e-119 431.8 AB1A_ARATH reviewed ABC transporter A family member 1 (ABC transporter ABCA.1) (AtABCA1) (ABC one homolog protein 1) (AtAOH1) ABCA1 ABC1 AOH1 At2g41700 T32G6.22 Arabidopsis thaliana (Mouse-ear cress) 1882 lipid transport [GO:0006869] integral component of membrane [GO:0016021]; vacuolar membrane [GO:0005774] ATPase activity, coupled to transmembrane movement of substances [GO:0042626]; ATP binding [GO:0005524] integral component of membrane [GO:0016021]; vacuolar membrane [GO:0005774]; ATP binding [GO:0005524]; ATPase activity, coupled to transmembrane movement of substances [GO:0042626]; lipid transport [GO:0006869] GO:0005524; GO:0005774; GO:0006869; GO:0016021; GO:0042626 TRINITY_DN7881_c1_g1_i5 219 0 60 0 71.14412382 -9.239105067 1.950371396 -4.737100373 2.17e-06 0.001154394 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN644_c0_g1_i2 0 46 0 98 34.9838348 8.583675721 2.345952411 3.658930029 0.00025327 0.020989914 1 sp P98158 LRP2_RAT 27.6 185 110 7 509 1054 2787 2950 1e-06 57.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN6955_c0_g1_i2 0 25 0 256 65.0574777 8.890597461 2.00329802 4.437980456 9.08e-06 0.002650122 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN13413_c0_g1_i8 59 0 68 0 30.44449879 -8.366714157 2.448967202 -3.416425565 0.00063449 0.039171026 3 sp Q2F637 1433Z_BOMMO 94.2 137 8 0 140 550 4 140 3.7e-63 245.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN13413_c0_g1_i8 59 0 68 0 30.44449879 -8.366714157 2.448967202 -3.416425565 0.00063449 0.039171026 3 sp Q2F637 1433Z_BOMMO 63.8 138 12 1 1966 2379 147 246 2.6e-40 169.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN13413_c0_g1_i8 59 0 68 0 30.44449879 -8.366714157 2.448967202 -3.416425565 0.00063449 0.039171026 3 sp Q2F637 1433Z_BOMMO 67.6 74 24 0 1661 1882 140 213 7.1e-22 108.2 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN100883_c0_g1_i1 0 41 0 101 34.28181892 8.527122679 2.361217529 3.611324487 0.000304637 0.023508942 1 sp Q9UHR6 ZNHI2_HUMAN 57.9 38 15 1 64 177 18 54 6.5e-07 56.6 ZNHI2_HUMAN reviewed Zinc finger HIT domain-containing protein 2 (Protein FON) ZNHIT2 C11orf5 Homo sapiens (Human) 403 neurogenesis [GO:0022008] metal ion binding [GO:0046872] metal ion binding [GO:0046872]; neurogenesis [GO:0022008] GO:0022008; GO:0046872 TRINITY_DN3042_c0_g1_i3 0 38 0 90 30.9535736 8.388838406 2.437955649 3.440931507 0.000579715 0.037398902 1 sp Q72JR7 TAL_THET2 26 262 124 10 136 912 6 200 9.5e-09 63.2 TAL_THET2 reviewed Probable transaldolase (EC 2.2.1.2) tal TT_C0701 Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) 223 carbohydrate metabolic process [GO:0005975]; pentose-phosphate shunt [GO:0006098] cytoplasm [GO:0005737] aldehyde-lyase activity [GO:0016832]; sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity [GO:0004801] cytoplasm [GO:0005737]; aldehyde-lyase activity [GO:0016832]; sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity [GO:0004801]; carbohydrate metabolic process [GO:0005975]; pentose-phosphate shunt [GO:0006098] GO:0004801; GO:0005737; GO:0005975; GO:0006098; GO:0016832 TRINITY_DN90_c1_g1_i5 0 92 0 144 58.15783673 9.353166685 2.038514775 4.588226095 4.47e-06 0.001728471 1 sp Q9LT78 RD21C_ARATH 41.5 313 164 8 148 1062 43 344 7.6e-59 229.6 RD21C_ARATH reviewed Probable cysteine protease RD21C (EC 3.4.22.-) RD21C At3g19390 MLD14.12 Arabidopsis thaliana (Mouse-ear cress) 452 cysteine-type peptidase activity [GO:0008234] cysteine-type peptidase activity [GO:0008234] GO:0008234 TRINITY_DN3032_c0_g1_i1 0 41 0 140 43.13919357 8.771389159 2.208508452 3.971634862 7.14e-05 0.009214215 1 sp Q3EDF8 PPR28_ARATH 24.5 343 237 11 141 1103 207 549 2.8e-17 91.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN83977_c0_g1_i3 2035 7431 4205 10554 5907.543317 1.658952442 0.288672361 5.746835054 9.09e-09 3.23e-05 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN299_c0_g3_i2 0 80 0 223 72.77965246 9.575641031 1.938278974 4.940280094 7.8e-07 0.000666394 1 sp P78615 FAS2_EMEND 40 2130 920 35 6410 12553 3 1856 0 1325.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN11222_c0_g1_i1 0 38 0 120 37.76693872 8.604668333 2.294425095 3.75025027 0.000176658 0.017793978 1 sp Q9C9C6 RL62_ARATH 53.3 150 65 2 144 578 84 233 9.1e-35 148.7 RL62_ARATH reviewed 60S ribosomal protein L6-2 RPL6B At1g74060 F2P9.7 Arabidopsis thaliana (Mouse-ear cress) 233 cytoplasmic translation [GO:0002181]; mature ribosome assembly [GO:0042256]; ribosomal large subunit assembly [GO:0000027] cytosolic large ribosomal subunit [GO:0022625]; cytosolic ribosome [GO:0022626]; nucleolus [GO:0005730] mRNA binding [GO:0003729]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735] cytosolic large ribosomal subunit [GO:0022625]; cytosolic ribosome [GO:0022626]; nucleolus [GO:0005730]; mRNA binding [GO:0003729]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]; cytoplasmic translation [GO:0002181]; mature ribosome assembly [GO:0042256]; ribosomal large subunit assembly [GO:0000027] GO:0000027; GO:0002181; GO:0003723; GO:0003729; GO:0003735; GO:0005730; GO:0022625; GO:0022626; GO:0042256 TRINITY_DN1469_c0_g1_i10 0 63 0 89 37.64322343 8.732591117 2.293610087 3.807356433 0.00014046 0.01503348 1 sp Q9TW32 PPIB_DICDI 75 168 42 0 113 616 30 197 1e-70 268.9 PPIB_DICDI reviewed Peptidyl-prolyl cis-trans isomerase B (PPIase B) (EC 5.2.1.8) (Cyclophilin B) (Rotamase B) cypB cyp2 DDB_G0269120 Dictyostelium discoideum (Slime mold) 197 protein folding [GO:0006457] endoplasmic reticulum [GO:0005783]; intracellular membrane-bounded organelle [GO:0043231] peptidyl-prolyl cis-trans isomerase activity [GO:0003755] endoplasmic reticulum [GO:0005783]; intracellular membrane-bounded organelle [GO:0043231]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]; protein folding [GO:0006457] GO:0003755; GO:0005783; GO:0006457; GO:0043231 TRINITY_DN332_c0_g2_i3 0 88 0 70 40.24485418 8.799225791 2.249023314 3.912465352 9.14e-05 0.010866699 1 sp Q03043 KGP24_DROME 66.5 714 214 5 409 2535 395 1088 1.5e-270 934.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN28126_c0_g1_i1 0 53 0 89 34.87651863 8.610776795 2.347452346 3.668136995 0.000244324 0.02073252 1 sp Q9JK81 MYG1_MOUSE 47 321 144 8 163 1056 44 361 9.3e-80 299.3 MYG1_MOUSE reviewed UPF0160 protein MYG1, mitochondrial (Protein Gamm1) Myg1 Mus musculus (Mouse) 380 locomotory exploration behavior [GO:0035641] extracellular exosome [GO:0070062]; mitochondrion [GO:0005739]; nucleoplasm [GO:0005654]; nucleus [GO:0005634] extracellular exosome [GO:0070062]; mitochondrion [GO:0005739]; nucleoplasm [GO:0005654]; nucleus [GO:0005634]; locomotory exploration behavior [GO:0035641] GO:0005634; GO:0005654; GO:0005739; GO:0035641; GO:0070062 TRINITY_DN5143_c0_g1_i16 0 63 0 78 35.14498955 8.636186016 2.341270802 3.688674547 0.000225425 0.020005561 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1710_c2_g1_i20 0 46 0 133 42.93276078 8.811303793 2.210395054 3.98630271 6.71e-05 0.008989904 1 sp Q5EA10 PIGM_BOVIN 43.7 394 205 6 1355 2491 24 415 5e-81 304.3 PIGM_BOVIN reviewed GPI mannosyltransferase 1 (EC 2.4.1.-) (GPI mannosyltransferase I) (GPI-MT-I) (Phosphatidylinositol-glycan biosynthesis class M protein) (PIG-M) PIGM Bos taurus (Bovine) 423 GPI anchor biosynthetic process [GO:0006506] endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021] transferase activity, transferring hexosyl groups [GO:0016758] endoplasmic reticulum membrane [GO:0005789]; integral component of membrane [GO:0016021]; transferase activity, transferring hexosyl groups [GO:0016758]; GPI anchor biosynthetic process [GO:0006506] GO:0005789; GO:0006506; GO:0016021; GO:0016758 TRINITY_DN5291_c0_g2_i24 0 74 0 137 51.5879829 9.162843785 2.101392804 4.360366975 1.3e-05 0.003352398 1 sp Q24154 RL29_DROME 54.9 71 29 1 67 279 1 68 6.9e-11 68.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN3295_c0_g1_i2 0 30 0 141 40.32293047 8.56797986 2.254165385 3.800954409 0.00014414 0.015273802 1 sp Q29116 TENA_PIG 33.2 575 248 13 1559 3217 161 621 1.7e-32 143.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN3104_c0_g1_i17 0 38 0 117 37.08560221 8.585679477 2.306735333 3.722004581 0.000197647 0.018709746 1 sp Q5JKB0 MCM4_ORYSJ 40.9 762 390 17 286 2502 135 859 1e-146 522.7 MCM4_ORYSJ reviewed DNA replication licensing factor MCM4 (EC 3.6.4.12) (Minichromosome maintenance protein 4) (OsMCM4) MCM4 Os01g0544450 LOC_Os01g36390 OSJNBa0051H17.26 Oryza sativa subsp. japonica (Rice) 862 cell cycle [GO:0007049]; DNA replication initiation [GO:0006270] cytosol [GO:0005829]; MCM complex [GO:0042555]; THO complex [GO:0000347] ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]; metal ion binding [GO:0046872] cytosol [GO:0005829]; MCM complex [GO:0042555]; THO complex [GO:0000347]; ATP binding [GO:0005524]; DNA binding [GO:0003677]; DNA helicase activity [GO:0003678]; metal ion binding [GO:0046872]; cell cycle [GO:0007049]; DNA replication initiation [GO:0006270] GO:0000347; GO:0003677; GO:0003678; GO:0005524; GO:0005829; GO:0006270; GO:0007049; GO:0042555; GO:0046872 TRINITY_DN6024_c1_g1_i7 0 19 0 150 39.32356472 8.318920932 2.277182363 3.653164132 0.000259029 0.021228347 1 sp Q869Y7 ODO2_DICDI 56.5 386 145 4 558 1709 75 439 8.7e-85 316.6 ODO2_DICDI reviewed Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial (EC 2.3.1.61) (2-oxoglutarate dehydrogenase complex component E2) (OGDC-E2) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex) odhB dlst DDB_G0275029 Dictyostelium discoideum (Slime mold) 439 L-lysine catabolic process to acetyl-CoA via saccharopine [GO:0033512]; tricarboxylic acid cycle [GO:0006099] mitochondrion [GO:0005739]; oxoglutarate dehydrogenase complex [GO:0045252] dihydrolipoyllysine-residue succinyltransferase activity [GO:0004149] mitochondrion [GO:0005739]; oxoglutarate dehydrogenase complex [GO:0045252]; dihydrolipoyllysine-residue succinyltransferase activity [GO:0004149]; L-lysine catabolic process to acetyl-CoA via saccharopine [GO:0033512]; tricarboxylic acid cycle [GO:0006099] GO:0004149; GO:0005739; GO:0006099; GO:0033512; GO:0045252 TRINITY_DN2128_c0_g1_i7 0 91 0 135 55.83715672 9.298259314 2.058994411 4.515922561 6.3e-06 0.002201189 1 sp P87262 RL34A_YEAST 48 127 57 2 47 424 3 121 3e-21 103.2 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN7393_c0_g1_i1 0 51 0 113 39.77386976 8.760900254 2.257944865 3.880032852 0.000104442 0.01208977 1 sp O80725 AB4B_ARATH 25.4 461 331 8 373 1725 161 618 8.9e-35 150.2 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN14733_c0_g1_i3 0 25 0 141 38.93957807 8.44855826 2.279190139 3.706824682 0.000209874 0.019351121 1 sp Q9LHQ7 MCES1_ARATH 29.1 330 196 11 2387 3337 43 347 1.6e-22 110.2 MCES1_ARATH reviewed mRNA cap guanine-N7 methyltransferase 1 (EC 2.1.1.56) (mRNA (guanine-N(7)-)-methyltransferase 1) (mRNA cap methyltransferase 1) At3g20650 F3H11.3 Arabidopsis thaliana (Mouse-ear cress) 370 7-methylguanosine mRNA capping [GO:0006370]; RNA (guanine-N7)-methylation [GO:0036265] mRNA cap binding complex [GO:0005845]; nucleus [GO:0005634] mRNA (guanine-N7-)-methyltransferase activity [GO:0004482]; RNA binding [GO:0003723] mRNA cap binding complex [GO:0005845]; nucleus [GO:0005634]; mRNA (guanine-N7-)-methyltransferase activity [GO:0004482]; RNA binding [GO:0003723]; 7-methylguanosine mRNA capping [GO:0006370]; RNA (guanine-N7)-methylation [GO:0036265] GO:0003723; GO:0004482; GO:0005634; GO:0005845; GO:0006370; GO:0036265 TRINITY_DN2038_c0_g1_i25 0 40 0 241 65.80085233 9.157677508 1.989260518 4.603558671 4.15e-06 0.001669087 1 sp Q98SJ2 DAZP1_XENLA 44 84 40 2 76 309 114 196 3.1e-11 71.2 DAZP1_XENLA reviewed DAZ-associated protein 1 (Deleted in azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) dazap1 prrp Xenopus laevis (African clawed frog) 360 multicellular organism development [GO:0007275]; oogenesis [GO:0048477] cytoplasm [GO:0005737] RNA binding [GO:0003723] cytoplasm [GO:0005737]; RNA binding [GO:0003723]; multicellular organism development [GO:0007275]; oogenesis [GO:0048477] GO:0003723; GO:0005737; GO:0007275; GO:0048477 TRINITY_DN2002_c0_g1_i2 0 33 0 92 30.02444554 8.309635847 2.462719968 3.374170005 0.000740386 0.042851867 1 sp P09622 DLDH_HUMAN 60.2 470 182 4 162 1568 43 508 1.2e-152 541.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN894_c0_g1_i35 0 60 0 153 51.34839091 9.098033005 2.105223355 4.321647384 1.55e-05 0.003598946 1 sp Q6GMC7 AK1A1_XENLA 51.2 328 147 4 111 1091 9 324 5.3e-92 340.1 AK1A1_XENLA reviewed Alcohol dehydrogenase [NADP(+)] (EC 1.1.1.2) (Aldehyde reductase) (Aldo-keto reductase family 1 member A1) akr1a1 Xenopus laevis (African clawed frog) 327 alcohol dehydrogenase (NADP+) activity [GO:0008106] alcohol dehydrogenase (NADP+) activity [GO:0008106] GO:0008106 TRINITY_DN1988_c1_g1_i12 0 28 0 224 58.61989967 8.866894754 2.048140524 4.329241402 1.5e-05 0.00356971 1 sp P22953 MD37E_ARATH 58.3 551 219 5 532 2160 8 555 1.7e-171 604.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2876_c0_g1_i4 77 0 41 0 29.34465883 -8.201673053 2.479606426 -3.307651153 0.000940819 0.0494778 2 sp Q9CYA6 ZCHC8_MOUSE 39.7 189 104 4 696 1238 222 408 2e-32 142.5 ZCHC8_MOUSE reviewed Zinc finger CCHC domain-containing protein 8 (TRAMP-like complex RNA-binding factor ZCCHC8) Zcchc8 Mus musculus (Mouse) 709 mRNA processing [GO:0006397]; RNA splicing [GO:0008380] catalytic step 2 spliceosome [GO:0071013]; nuclear body [GO:0016604]; nucleoplasm [GO:0005654] RNA binding [GO:0003723]; zinc ion binding [GO:0008270] catalytic step 2 spliceosome [GO:0071013]; nuclear body [GO:0016604]; nucleoplasm [GO:0005654]; RNA binding [GO:0003723]; zinc ion binding [GO:0008270]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380] GO:0003723; GO:0005654; GO:0006397; GO:0008270; GO:0008380; GO:0016604; GO:0071013 TRINITY_DN11720_c0_g1_i2 0 65 0 78 35.69833051 8.65849739 2.33015089 3.715852663 0.00020252 0.018918704 1 sp P62312 LSM6_HUMAN 58.1 74 31 0 37 258 1 74 6.2e-20 99 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN6978_c0_g1_i27 0 60 0 204 62.93111162 9.310648851 2.003982693 4.646072485 3.38e-06 0.001504594 1 sp P43508 CPR4_CAEEL 34.3 289 149 11 140 943 67 335 7.3e-37 158.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1545_c0_g1_i7 0 55 0 111 40.42632734 8.800027799 2.246973635 3.916391213 8.99e-05 0.010816083 1 sp P26182 ACT_ACHBI 89.4 369 39 0 49 1155 1 369 2.2e-194 679.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN9803_c0_g1_i1 0 59 0 125 44.71257965 8.936797531 2.183980081 4.091977582 4.28e-05 0.006747997 1 sp B8AM21 RU2B_ORYSI 40.7 236 115 5 70 735 8 232 5e-37 156.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN5443_c0_g1_i29 0 68 0 43 28.57941597 8.265272277 2.50078397 3.305072479 0.000949518 0.049689909 1 sp Q502K3 ANR52_DANRE 28.6 217 140 3 664 1305 147 351 1.7e-15 86.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN20103_c0_g1_i1 0 42 0 76 28.88068513 8.331490713 2.492260292 3.342945655 0.000828941 0.045479627 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1289_c0_g1_i5 153 0 116 0 65.82140849 -9.439777386 1.979451195 -4.768886149 1.85e-06 0.001037731 3 sp P00522 ABL_DROME 55.5 884 285 15 292 2706 93 947 9.7e-250 866.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN6514_c0_g1_i1 0 28 0 129 37.04424346 8.455609812 2.310754559 3.659241862 0.000252963 0.020989914 1 sp Q8C5Q4 GRSF1_MOUSE 28 243 118 8 939 1526 242 474 1.3e-15 86.3 GRSF1_MOUSE reviewed G-rich sequence factor 1 (GRSF-1) Grsf1 Mus musculus (Mouse) 479 anterior/posterior pattern specification [GO:0009952]; morphogenesis of embryonic epithelium [GO:0016331]; mRNA processing [GO:0006397]; tRNA processing [GO:0008033] mitochondrial nucleoid [GO:0042645]; mitochondrion [GO:0005739]; ribonucleoprotein granule [GO:0035770] RNA binding [GO:0003723] mitochondrial nucleoid [GO:0042645]; mitochondrion [GO:0005739]; ribonucleoprotein granule [GO:0035770]; RNA binding [GO:0003723]; anterior/posterior pattern specification [GO:0009952]; morphogenesis of embryonic epithelium [GO:0016331]; mRNA processing [GO:0006397]; tRNA processing [GO:0008033] GO:0003723; GO:0005739; GO:0006397; GO:0008033; GO:0009952; GO:0016331; GO:0035770; GO:0042645 TRINITY_DN4549_c0_g1_i2 0 33 0 167 47.05785834 8.757688517 2.159888869 4.054694036 5.02e-05 0.007476987 1 sp Q5H8A6 CASTO_LOTJA 33.9 546 302 14 177 1712 172 692 1.6e-73 279.6 CASTO_LOTJA reviewed Ion channel CASTOR CASTOR Lotus japonicus (Lotus corniculatus var. japonicus) 853 ion transport [GO:0006811] integral component of membrane [GO:0016021]; nuclear membrane [GO:0031965] integral component of membrane [GO:0016021]; nuclear membrane [GO:0031965]; ion transport [GO:0006811] GO:0006811; GO:0016021; GO:0031965 TRINITY_DN6283_c0_g1_i7 0 79 0 147 55.24245701 9.260600491 2.065066807 4.484407216 7.31e-06 0.002315106 1 sp Q6GQN8 MECR_DANRE 24.4 287 196 8 99 941 48 319 2.6e-11 71.6 MECR_DANRE reviewed Enoyl-[acyl-carrier-protein] reductase, mitochondrial (EC 1.3.1.104) (2-enoyl thioester reductase) mecr zgc:110153 Danio rerio (Zebrafish) (Brachydanio rerio) 377 fatty acid biosynthetic process [GO:0006633]; pronephric nephron tubule development [GO:0039020] mitochondrion [GO:0005739] oxidoreductase activity [GO:0016491] mitochondrion [GO:0005739]; oxidoreductase activity [GO:0016491]; fatty acid biosynthetic process [GO:0006633]; pronephric nephron tubule development [GO:0039020] GO:0005739; GO:0006633; GO:0016491; GO:0039020 TRINITY_DN57501_c0_g1_i2 0 70 19 242 78.46188763 5.326168067 1.431826004 3.71984309 0.000199347 0.018755349 1 sp P98164 LRP2_HUMAN 37.8 4708 2571 110 53 13579 28 4575 0 3059.2 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN21508_c0_g1_i16 0 20 0 110 30.51574837 8.116582061 2.455542834 3.305412534 0.000948367 0.049689909 1 sp P19799 TRY1_XENLA 27.4 234 128 13 99 752 7 214 1e-10 70.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN5835_c0_g1_i1 0 39 0 78 28.50489803 8.299564655 2.503275608 3.315481775 0.000914853 0.048351006 1 sp Q5R814 PRP4B_PONAB 74.1 348 90 0 223 1266 660 1007 3e-156 553.1 PRP4B_PONAB reviewed Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1) (PRP4 pre-mRNA-processing factor 4 homolog) PRPF4B Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii) 1007 mRNA processing [GO:0006397]; RNA splicing [GO:0008380] spliceosomal complex [GO:0005681] ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674] spliceosomal complex [GO:0005681]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380] GO:0004674; GO:0005524; GO:0005681; GO:0006397; GO:0008380 TRINITY_DN16432_c0_g1_i25 0 43 0 110 36.87916941 8.623511279 2.30955944 3.733833878 0.000188587 0.018425287 1 sp Q6PFJ1 NGDN_DANRE 23.2 250 163 6 22 699 12 256 3e-08 61.2 NGDN_DANRE reviewed Neuroguidin (EIF4E-binding protein) ngdn zgc:66416 Danio rerio (Zebrafish) (Brachydanio rerio) 315 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; regulation of translation [GO:0006417] cytoplasm [GO:0005737]; nucleolus [GO:0005730]; small-subunit processome [GO:0032040] cytoplasm [GO:0005737]; nucleolus [GO:0005730]; small-subunit processome [GO:0032040]; maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; regulation of translation [GO:0006417] GO:0000462; GO:0005730; GO:0005737; GO:0006417; GO:0032040 TRINITY_DN16951_c0_g1_i2 0 57 0 142 48.02014559 9.007303177 2.142642012 4.20383019 2.62e-05 0.004899348 1 sp Q15427 SF3B4_HUMAN 60.5 200 77 2 35 628 1 200 5.1e-70 266.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN88_c1_g1_i23 0 40 0 110 36.04915797 8.574199412 2.325810698 3.686542254 0.000227322 0.020031922 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1474_c0_g1_i3 24 0 154 0 39.87163399 -8.367262455 2.264761073 -3.694545333 0.000220281 0.019904877 3 sp Q8AXB3 VGFR4_DANRE 26.2 1287 723 35 279 4004 50 1154 1.4e-109 399.8 VGFR4_DANRE reviewed Vascular endothelial growth factor receptor kdr-like (EC 2.7.10.1) (Fetal liver kinase 1) (FLK-1) (Kinase insert domain receptor-A) (Kinase insert domain receptor-like) (Protein-tyrosine kinase receptor flk-1) (Vascular endothelial growth factor receptor 4) (VEGFR-4) kdrl flk flk-1 flk1 flka kdr kdra vegfr2 vegfr4 vegr2 si:ch211-276g21.4 Danio rerio (Zebrafish) (Brachydanio rerio) 1302 angiogenesis [GO:0001525]; artery morphogenesis [GO:0048844]; blood vessel development [GO:0001568]; cell differentiation [GO:0030154]; embryonic heart tube development [GO:0035050]; peptidyl-tyrosine phosphorylation [GO:0018108]; sprouting angiogenesis [GO:0002040]; thyroid gland development [GO:0030878]; transmembrane receptor protein tyrosine kinase signaling pathway [GO:0007169] integral component of membrane [GO:0016021]; plasma membrane [GO:0005886] ATP binding [GO:0005524]; protein tyrosine kinase activity [GO:0004713]; transmembrane receptor protein tyrosine kinase activity [GO:0004714] integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; ATP binding [GO:0005524]; protein tyrosine kinase activity [GO:0004713]; transmembrane receptor protein tyrosine kinase activity [GO:0004714]; angiogenesis [GO:0001525]; artery morphogenesis [GO:0048844]; blood vessel development [GO:0001568]; cell differentiation [GO:0030154]; embryonic heart tube development [GO:0035050]; peptidyl-tyrosine phosphorylation [GO:0018108]; sprouting angiogenesis [GO:0002040]; thyroid gland development [GO:0030878]; transmembrane receptor protein tyrosine kinase signaling pathway [GO:0007169] GO:0001525; GO:0001568; GO:0002040; GO:0004713; GO:0004714; GO:0005524; GO:0005886; GO:0007169; GO:0016021; GO:0018108; GO:0030154; GO:0030878; GO:0035050; GO:0048844 TRINITY_DN8550_c0_g1_i1 0 95 0 188 68.98078368 9.570975106 1.959559054 4.884249385 1.04e-06 0.000737113 1 sp A2ZB00 RS16_ORYSI 69.3 137 42 0 75 485 13 149 4.7e-52 206.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1863_c0_g1_i19 0 27 0 133 37.67602166 8.454771774 2.299855394 3.67621886 0.000236716 0.020412243 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN5797_c0_g1_i11 0 28 0 137 38.86114082 8.500930947 2.278902091 3.730274759 0.000191271 0.018517648 1 sp P29980 CPXN_NOSS1 28.2 220 139 7 958 1605 251 455 6.8e-15 84 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN6665_c0_g1_i1 0 23 0 126 34.97955455 8.309629858 2.352971575 3.531547064 0.000413136 0.029122756 1 sp Q27268 DX39B_DROME 65.1 427 140 4 83 1360 3 421 5.7e-156 552.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN21022_c0_g1_i1 0 34 0 113 35.07047161 8.484670324 2.346500646 3.615882373 0.000299326 0.023352932 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN16015_c0_g1_i1 0 54 0 107 39.24120818 8.760076502 2.266439452 3.86512708 0.000111031 0.012646295 1 sp Q74GM3 COXX_GEOSL 35.7 143 85 3 466 885 7 145 1.1e-12 75.9 COXX_GEOSL reviewed Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme B farnesyltransferase) (Heme O synthase) ctaB GSU0223 Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) 270 cellular respiration [GO:0045333]; heme biosynthetic process [GO:0006783]; heme O biosynthetic process [GO:0048034] integral component of membrane [GO:0016021]; plasma membrane [GO:0005886] farnesyltranstransferase activity [GO:0004311]; protoheme IX farnesyltransferase activity [GO:0008495] integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; farnesyltranstransferase activity [GO:0004311]; protoheme IX farnesyltransferase activity [GO:0008495]; cellular respiration [GO:0045333]; heme biosynthetic process [GO:0006783]; heme O biosynthetic process [GO:0048034] GO:0004311; GO:0005886; GO:0006783; GO:0008495; GO:0016021; GO:0045333; GO:0048034 TRINITY_DN325_c1_g1_i15 243 45 382 11 162.5157352 -3.667760068 0.937608323 -3.911825415 9.16e-05 0.010866699 3 sp Q94572 TBA3_HOMAM 94.7 451 22 1 464 1810 1 451 5.3e-257 888.3 TBA3_HOMAM reviewed Tubulin alpha-3 chain (Alpha-III tubulin) Homarus americanus (American lobster) 451 microtubule-based process [GO:0007017] cytoplasm [GO:0005737]; microtubule [GO:0005874] GTPase activity [GO:0003924]; GTP binding [GO:0005525]; structural constituent of cytoskeleton [GO:0005200] cytoplasm [GO:0005737]; microtubule [GO:0005874]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; structural constituent of cytoskeleton [GO:0005200]; microtubule-based process [GO:0007017] GO:0003924; GO:0005200; GO:0005525; GO:0005737; GO:0005874; GO:0007017 TRINITY_DN9522_c0_g1_i23 94 0 44 0 34.50663418 -8.399008512 2.356097769 -3.564796259 0.000364139 0.026836662 2 sp Q1L8G6 AKIB1_DANRE 46.9 780 360 8 483 2771 1 743 2.2e-200 702.2 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN12088_c0_g1_i7 0 81 0 34 30.13212268 8.233097639 2.459617106 3.34730866 0.000816003 0.045479627 1 sp A1Z713 VPS13_DROME 19.8 3335 1995 95 258 9641 6 2866 1.3e-110 404.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN12088_c0_g1_i7 0 81 0 34 30.13212268 8.233097639 2.459617106 3.34730866 0.000816003 0.045479627 1 sp A1Z713 VPS13_DROME 37.5 336 201 5 9830 10828 2915 3244 4.7e-57 226.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2365_c0_g1_i12 0 61 0 108 41.40501371 8.852093 2.231170939 3.967465174 7.26e-05 0.009217134 1 sp P12532 KCRU_HUMAN 50.8 372 163 5 180 1292 52 404 7.5e-102 372.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN752_c0_g1_i5 0 22 0 113 31.75042585 8.198282412 2.424008753 3.382117495 0.000719294 0.042597624 1 sp Q9AAV6 KPRS_CAUVC 48.3 319 155 5 119 1075 3 311 5.4e-72 273.1 KPRS_CAUCR reviewed Ribose-phosphate pyrophosphokinase (RPPK) (EC 2.7.6.1) (5-phospho-D-ribosyl alpha-1-diphosphate) (Phosphoribosyl diphosphate synthase) (Phosphoribosyl pyrophosphate synthase) (P-Rib-PP synthase) (PRPP synthase) (PRPPase) prs CC_0487 Caulobacter crescentus (strain ATCC 19089 / CB15) 312 5-phosphoribose 1-diphosphate biosynthetic process [GO:0006015]; nucleoside metabolic process [GO:0009116]; nucleotide biosynthetic process [GO:0009165]; ribonucleoside monophosphate biosynthetic process [GO:0009156] cytoplasm [GO:0005737] ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749] cytoplasm [GO:0005737]; ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]; 5-phosphoribose 1-diphosphate biosynthetic process [GO:0006015]; nucleoside metabolic process [GO:0009116]; nucleotide biosynthetic process [GO:0009165]; ribonucleoside monophosphate biosynthetic process [GO:0009156] GO:0000287; GO:0004749; GO:0005524; GO:0005737; GO:0006015; GO:0009116; GO:0009156; GO:0009165; GO:0016301 TRINITY_DN10746_c0_g1_i2 0 64 0 151 52.00084849 9.133073055 2.09798443 4.353260646 1.34e-05 0.003372345 1 sp Q15024 EXOS7_HUMAN 29.8 285 152 12 128 889 4 271 6.3e-19 96.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1883_c0_g1_i20 0 28 0 151 42.04071121 8.574004543 2.228970034 3.846621719 0.000119758 0.013393409 1 sp P18562 UPP_YEAST 49.2 199 95 4 88 681 21 214 3.7e-48 193.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2990_c0_g1_i15 0 49 0 91 34.22406105 8.57241212 2.361383756 3.630249466 0.000283147 0.022587105 1 sp P56286 IF2A_SCHPO 47.8 276 140 3 65 886 4 277 8.1e-65 249.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN23911_c0_g1_i1 0 54 0 86 34.4718526 8.59859965 2.355763965 3.65002597 0.000262214 0.021398052 1 sp Q67XX3 FB252_ARATH 32.6 457 270 12 31 1347 60 496 4.1e-60 233.8 FB252_ARATH reviewed F-box protein At5g06550 At5g06550 F15M7.8 Arabidopsis thaliana (Mouse-ear cress) 502 histone H4-R3 methylation [GO:0043985]; positive regulation of seed germination [GO:0010030] nucleus [GO:0005634] core promoter proximal region sequence-specific DNA binding [GO:0000987] nucleus [GO:0005634]; core promoter proximal region sequence-specific DNA binding [GO:0000987]; histone H4-R3 methylation [GO:0043985]; positive regulation of seed germination [GO:0010030] GO:0000987; GO:0005634; GO:0010030; GO:0043985 TRINITY_DN38_c0_g3_i1 0 33 0 90 29.5702212 8.293057761 2.474779093 3.351029506 0.000805117 0.045126821 1 sp P42867 GPT_MOUSE 43.8 432 205 7 135 1412 11 410 2.9e-92 341.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2934_c0_g1_i12 63 0 74 0 32.81091648 -8.475119235 2.391455522 -3.54391673 0.00039423 0.028463387 3 sp Q9ET30 TM9S3_MOUSE 75.7 564 137 0 142 1833 24 587 2.7e-239 829.7 TM9S3_MOUSE reviewed Transmembrane 9 superfamily member 3 Tm9sf3 Smbp Mus musculus (Mouse) 587 integral component of membrane [GO:0016021] integral component of membrane [GO:0016021] GO:0016021 TRINITY_DN1883_c0_g1_i30 0 77 0 84 40.38104929 8.833691366 2.246671791 3.931901136 8.43e-05 0.01037578 1 sp P18562 UPP_YEAST 49.2 199 95 4 88 681 21 214 4e-48 193.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN713_c0_g1_i19 0 37 0 112 35.67337087 8.534884956 2.333755969 3.657145421 0.00025504 0.021054615 1 sp A4Z943 ZBED5_BOVIN 35.5 557 319 10 541 2133 152 694 1.2e-88 331.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN24177_c0_g1_i1 0 28 0 101 30.68510268 8.270497626 2.447193902 3.37958411 0.000725956 0.04271308 1 sp Q9P6R2 YOH8_SCHPO 26.3 186 104 6 1095 1601 87 256 4.6e-06 54.7 YOH8_SCHPO reviewed Uncharacterized protein C13E7.08c SPBC13E7.08c Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) 429 histone modification [GO:0016570]; negative regulation of extent of heterochromatin assembly [GO:0033696]; positive regulation of transcription elongation from RNA polymerase II promoter [GO:0032968]; transcription elongation from RNA polymerase II promoter [GO:0006368] Cdc73/Paf1 complex [GO:0016593]; nucleus [GO:0005634] RNA binding [GO:0003723]; RNA polymerase II C-terminal domain phosphoserine binding [GO:1990269] Cdc73/Paf1 complex [GO:0016593]; nucleus [GO:0005634]; RNA binding [GO:0003723]; RNA polymerase II C-terminal domain phosphoserine binding [GO:1990269]; histone modification [GO:0016570]; negative regulation of extent of heterochromatin assembly [GO:0033696]; positive regulation of transcription elongation from RNA polymerase II promoter [GO:0032968]; transcription elongation from RNA polymerase II promoter [GO:0006368] GO:0003723; GO:0005634; GO:0006368; GO:0016570; GO:0016593; GO:0032968; GO:0033696; GO:1990269 TRINITY_DN12706_c0_g1_i2 0 49 0 166 51.25747385 9.019308725 2.107942847 4.278725459 1.88e-05 0.003894083 1 sp P21342 PFPA_SOLTU 33.4 527 333 8 2287 3837 89 607 5.5e-90 334.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN13034_c0_g1_i22 0 61 0 108 41.40501371 8.852093 2.231170939 3.967465174 7.26e-05 0.009217134 1 sp Q38896 CSP4_ARATH 59 78 31 1 119 352 14 90 9.6e-16 85.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN644_c0_g1_i1 0 53 0 162 51.45570709 9.054893768 2.105125165 4.301356478 1.7e-05 0.003727564 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1919_c0_g1_i21 0 40 0 95 32.64247541 8.46440206 2.397302582 3.530802545 0.000414301 0.029122756 1 sp P27484 GRP2_NICSY 45.6 68 34 2 184 381 8 74 1.3e-07 58.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN752_c0_g1_i18 0 42 0 94 32.9687042 8.489937432 2.389583989 3.552893505 0.000381019 0.027772504 1 sp Q9LEB3 RBP47_NICPL 24.6 345 213 12 101 1126 72 372 8.9e-10 67.4 RBP47_NICPL reviewed Polyadenylate-binding protein RBP47 (Poly(A)-binding protein RBP47) (RNA-binding protein 47) (NplRBP47) RBP47 Nicotiana plumbaginifolia (Leadwort-leaved tobacco) (Tex-Mex tobacco) 428 cellular response to heat [GO:0034605]; mRNA processing [GO:0006397] cytoplasmic stress granule [GO:0010494]; nucleus [GO:0005634] poly(A) binding [GO:0008143] cytoplasmic stress granule [GO:0010494]; nucleus [GO:0005634]; poly(A) binding [GO:0008143]; cellular response to heat [GO:0034605]; mRNA processing [GO:0006397] GO:0005634; GO:0006397; GO:0008143; GO:0010494; GO:0034605 TRINITY_DN336_c0_g1_i17 0 45 0 115 38.56807123 8.687815366 2.279034264 3.812060005 0.000137813 0.014824686 1 sp P90519 EF1A_CRYPV 43.5 469 231 8 33 1439 1 435 1.3e-100 368.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN4645_c1_g1_i7 0 22 0 136 36.97400577 8.338703494 2.315208026 3.601708097 0.000316133 0.02430802 1 sp B2X050 MNR1_CAPAN 27 307 168 11 82 861 9 306 6.7e-16 86.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2195_c1_g1_i1 0 60 0 57 29.54562253 8.37394843 2.473225121 3.385841572 0.000709603 0.042335693 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1765_c0_g1_i2 0 143 0 177 79.76273284 9.81815826 1.898557276 5.171378491 2.32e-07 0.000390585 1 sp P27484 GRP2_NICSY 55.9 59 25 1 1 177 20 77 1.1e-10 69.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN108285_c0_g1_i1 0 54 0 61 28.79404833 8.347130428 2.49395636 3.34694326 0.000817079 0.045479627 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN4655_c0_g1_i16 13 226 442 1027 395.3854372 2.631520371 0.714932374 3.680796207 0.000232507 0.020254142 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1469_c0_g1_i14 0 26 0 161 43.75849196 8.5735623 2.205572629 3.887227374 0.000101396 0.011801248 1 sp Q9TW32 PPIB_DICDI 75 168 42 0 113 616 30 197 1e-70 268.5 PPIB_DICDI reviewed Peptidyl-prolyl cis-trans isomerase B (PPIase B) (EC 5.2.1.8) (Cyclophilin B) (Rotamase B) cypB cyp2 DDB_G0269120 Dictyostelium discoideum (Slime mold) 197 protein folding [GO:0006457] endoplasmic reticulum [GO:0005783]; intracellular membrane-bounded organelle [GO:0043231] peptidyl-prolyl cis-trans isomerase activity [GO:0003755] endoplasmic reticulum [GO:0005783]; intracellular membrane-bounded organelle [GO:0043231]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]; protein folding [GO:0006457] GO:0003755; GO:0005783; GO:0006457; GO:0043231 TRINITY_DN4232_c0_g1_i18 0 95 0 136 57.17095081 9.334244873 2.046918026 4.560145915 5.11e-06 0.001845363 1 sp P0DJ52 RL8_TETTS 72.4 156 43 0 2 469 99 254 2.3e-62 240 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN332_c0_g2_i2 0 124 0 48 45.2085237 8.787264911 2.178694329 4.033271117 5.5e-05 0.007955996 1 sp Q03043 KGP24_DROME 66.5 714 214 5 493 2619 395 1088 1.5e-270 934.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN286_c0_g2_i1 0 110 0 170 69.04282181 9.601313376 1.958477007 4.90243865 9.47e-07 0.000737113 1 sp Q9HGL8 RL43A_SCHPO 59.6 94 37 1 41 322 1 93 1.8e-26 120.2 RL43A_SCHPO reviewed 60S ribosomal protein L43-A (L37A) rpl4301 rpl43a SPBC800.04c Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) 94 cytoplasmic translation [GO:0002181] cytosol [GO:0005829]; cytosolic large ribosomal subunit [GO:0022625] metal ion binding [GO:0046872]; structural constituent of ribosome [GO:0003735] cytosol [GO:0005829]; cytosolic large ribosomal subunit [GO:0022625]; metal ion binding [GO:0046872]; structural constituent of ribosome [GO:0003735]; cytoplasmic translation [GO:0002181] GO:0002181; GO:0003735; GO:0005829; GO:0022625; GO:0046872 TRINITY_DN98858_c0_g1_i1 0 37 0 85 29.54134227 8.327758098 2.474772418 3.365060172 0.00076527 0.043557514 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN18468_c0_g1_i2 0 41 0 109 36.09871628 8.584169654 2.324667094 3.692644712 0.000221934 0.019904877 1 sp O74835 RRP5_SCHPO 27.6 1917 1070 56 30 5531 5 1686 1.7e-123 446.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2394_c1_g1_i7 0 35 0 199 54.87878877 8.927053089 2.076504666 4.299076827 1.72e-05 0.003727564 1 sp Q8LC68 NRP2_ARATH 23.9 222 147 5 52 663 9 226 7.1e-18 93.2 NRP2_ARATH reviewed NAP1-related protein 2 (Nucleosome/chromatin assembly factor group A5) (Protein SET homolog 2) NRP2 NFA5 At1g18800 F6A14.10 Arabidopsis thaliana (Mouse-ear cress) 255 double-strand break repair via homologous recombination [GO:0000724]; nucleosome assembly [GO:0006334]; somatic cell DNA recombination [GO:0016444] cytoplasm [GO:0005737]; nucleus [GO:0005634] cytoplasm [GO:0005737]; nucleus [GO:0005634]; double-strand break repair via homologous recombination [GO:0000724]; nucleosome assembly [GO:0006334]; somatic cell DNA recombination [GO:0016444] GO:0000724; GO:0005634; GO:0005737; GO:0006334; GO:0016444 TRINITY_DN90_c1_g1_i1 0 3 0 234 53.97425938 7.411420752 2.040440996 3.632264186 0.000280945 0.02249569 1 sp Q9LT78 RD21C_ARATH 41.5 313 164 8 127 1041 43 344 7.4e-59 229.6 RD21C_ARATH reviewed Probable cysteine protease RD21C (EC 3.4.22.-) RD21C At3g19390 MLD14.12 Arabidopsis thaliana (Mouse-ear cress) 452 cysteine-type peptidase activity [GO:0008234] cysteine-type peptidase activity [GO:0008234] GO:0008234 TRINITY_DN7420_c0_g1_i11 98 0 98 0 47.31635812 -8.995983416 2.149103013 -4.185924714 2.84e-05 0.00517015 3 sp Q92982 NINJ1_HUMAN 45.1 113 56 2 403 738 35 142 1.7e-17 92 NINJ1_HUMAN reviewed Ninjurin-1 (Nerve injury-induced protein 1) NINJ1 Homo sapiens (Human) 152 cell adhesion [GO:0007155]; hyaloid vascular plexus regression [GO:1990384]; nervous system development [GO:0007399]; positive regulation of cell-matrix adhesion [GO:0001954]; tissue regeneration [GO:0042246] integral component of membrane [GO:0016021] integral component of membrane [GO:0016021]; cell adhesion [GO:0007155]; hyaloid vascular plexus regression [GO:1990384]; nervous system development [GO:0007399]; positive regulation of cell-matrix adhesion [GO:0001954]; tissue regeneration [GO:0042246] GO:0001954; GO:0007155; GO:0007399; GO:0016021; GO:0042246; GO:1990384 TRINITY_DN3922_c0_g1_i7 0 51 0 128 43.18055232 8.853529342 2.20606292 4.013271454 5.99e-05 0.008282127 1 sp Q9XIE6 ALA3_ARATH 36.1 1162 664 28 481 3882 49 1160 3.9e-164 580.9 ALA3_ARATH reviewed Phospholipid-transporting ATPase 3 (AtALA3) (EC 3.6.3.1) (Aminophospholipid ATPase 3) (Aminophospholipid flippase 3) (Protein IRREGULAR TRICHOME BRANCH 2) ALA3 ITB2 At1g59820 F23H11.14 Arabidopsis thaliana (Mouse-ear cress) 1213 Golgi vesicle budding [GO:0048194]; root development [GO:0048364]; shoot system development [GO:0048367] endoplasmic reticulum membrane [GO:0005789]; endosome [GO:0005768]; Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; trans-Golgi network [GO:0005802] ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phospholipid-translocating ATPase activity [GO:0004012]; phospholipid transporter activity [GO:0005548] endoplasmic reticulum membrane [GO:0005789]; endosome [GO:0005768]; Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; trans-Golgi network [GO:0005802]; ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phospholipid transporter activity [GO:0005548]; phospholipid-translocating ATPase activity [GO:0004012]; Golgi vesicle budding [GO:0048194]; root development [GO:0048364]; shoot system development [GO:0048367] GO:0000139; GO:0000287; GO:0004012; GO:0005524; GO:0005548; GO:0005768; GO:0005789; GO:0005794; GO:0005802; GO:0005886; GO:0016021; GO:0048194; GO:0048364; GO:0048367 TRINITY_DN493_c0_g1_i14 0 59 0 158 52.20728129 9.110206427 2.096472623 4.345492675 1.39e-05 0.003433197 1 sp P35684 RL3_ORYSJ 68.2 380 117 3 2 1132 10 388 4.3e-151 535.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN3598_c0_g1_i17 0 40 0 132 41.04562573 8.71070929 2.239659922 3.88929998 0.000100534 0.011765215 1 sp O42668 TPR1_SCHPO 19.3 865 596 28 174 2693 35 822 7.7e-08 61.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN48389_c0_g2_i1 0 45 0 115 38.56807123 8.687815366 2.279034264 3.812060005 0.000137813 0.014824686 1 sp A5DW14 PABP_LODEL 23.1 364 222 10 40 1119 157 466 1.8e-14 82.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN14658_c0_g1_i1 0 62 0 155 52.35595621 9.130354302 2.094583383 4.359031193 1.31e-05 0.003352398 1 sp Q28141 DHX9_BOVIN 32.6 1155 668 25 186 3455 33 1141 6.4e-161 570.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1237_c0_g1_i22 0 96 0 21 31.32972166 8.040078027 2.434255391 3.302890099 0.000956939 0.049955491 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN140_c0_g1_i4 0 53 0 82 33.28673343 8.550363829 2.38137287 3.590518703 0.000330021 0.025103956 1 sp Q9SIP7 RS31_ARATH 78.3 217 47 0 62 712 4 220 8.1e-93 342.4 RS31_ARATH reviewed 40S ribosomal protein S3-1 RPS3A At2g31610 T9H9.13 Arabidopsis thaliana (Mouse-ear cress) 250 cytoplasmic translation [GO:0002181]; DNA repair [GO:0006281]; mature ribosome assembly [GO:0042256]; response to salt stress [GO:0009651] chloroplast [GO:0009507]; cytosol [GO:0005829]; cytosolic ribosome [GO:0022626]; cytosolic small ribosomal subunit [GO:0022627]; membrane [GO:0016020]; nucleus [GO:0005634]; plasmodesma [GO:0009506]; vacuolar membrane [GO:0005774]; vacuole [GO:0005773] damaged DNA binding [GO:0003684]; mRNA binding [GO:0003729]; oxidized purine nucleobase lesion DNA N-glycosylase activity [GO:0008534]; structural constituent of ribosome [GO:0003735] chloroplast [GO:0009507]; cytosol [GO:0005829]; cytosolic ribosome [GO:0022626]; cytosolic small ribosomal subunit [GO:0022627]; membrane [GO:0016020]; nucleus [GO:0005634]; plasmodesma [GO:0009506]; vacuolar membrane [GO:0005774]; vacuole [GO:0005773]; damaged DNA binding [GO:0003684]; mRNA binding [GO:0003729]; oxidized purine nucleobase lesion DNA N-glycosylase activity [GO:0008534]; structural constituent of ribosome [GO:0003735]; cytoplasmic translation [GO:0002181]; DNA repair [GO:0006281]; mature ribosome assembly [GO:0042256]; response to salt stress [GO:0009651] GO:0002181; GO:0003684; GO:0003729; GO:0003735; GO:0005634; GO:0005773; GO:0005774; GO:0005829; GO:0006281; GO:0008534; GO:0009506; GO:0009507; GO:0009651; GO:0016020; GO:0022626; GO:0022627; GO:0042256 TRINITY_DN9446_c0_g1_i1 0 41 0 152 45.86453962 8.832772811 2.171983978 4.066684147 4.77e-05 0.007254866 1 sp Q921I9 EXOS4_MOUSE 35.9 217 135 2 37 675 1 217 9.5e-30 132.1 EXOS4_MOUSE reviewed Exosome complex component RRP41 (Exosome component 4) (Ribosomal RNA-processing protein 41) Exosc4 Rrp41 Mus musculus (Mouse) 245 defense response to virus [GO:0051607]; DNA deamination [GO:0045006]; histone mRNA catabolic process [GO:0071044]; maturation of 5.8S rRNA [GO:0000460]; nuclear mRNA surveillance [GO:0071028]; nuclear-transcribed mRNA catabolic process [GO:0000956]; nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' [GO:0034427]; polyadenylation-dependent snoRNA 3'-end processing [GO:0071051]; positive regulation of cell growth [GO:0030307]; rRNA 3'-end processing [GO:0031125]; rRNA catabolic process [GO:0016075]; U4 snRNA 3'-end processing [GO:0034475] cytoplasm [GO:0005737]; cytoplasmic exosome (RNase complex) [GO:0000177]; cytosol [GO:0005829]; exosome (RNase complex) [GO:0000178]; intermediate filament cytoskeleton [GO:0045111]; nuclear exosome (RNase complex) [GO:0000176]; nucleolus [GO:0005730]; nucleus [GO:0005634]; transcriptionally active chromatin [GO:0035327] AU-rich element binding [GO:0017091] cytoplasm [GO:0005737]; cytoplasmic exosome (RNase complex) [GO:0000177]; cytosol [GO:0005829]; exosome (RNase complex) [GO:0000178]; intermediate filament cytoskeleton [GO:0045111]; nuclear exosome (RNase complex) [GO:0000176]; nucleolus [GO:0005730]; nucleus [GO:0005634]; transcriptionally active chromatin [GO:0035327]; AU-rich element binding [GO:0017091]; defense response to virus [GO:0051607]; DNA deamination [GO:0045006]; histone mRNA catabolic process [GO:0071044]; maturation of 5.8S rRNA [GO:0000460]; nuclear mRNA surveillance [GO:0071028]; nuclear-transcribed mRNA catabolic process [GO:0000956]; nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' [GO:0034427]; polyadenylation-dependent snoRNA 3'-end processing [GO:0071051]; positive regulation of cell growth [GO:0030307]; rRNA 3'-end processing [GO:0031125]; rRNA catabolic process [GO:0016075]; U4 snRNA 3'-end processing [GO:0034475] GO:0000176; GO:0000177; GO:0000178; GO:0000460; GO:0000956; GO:0005634; GO:0005730; GO:0005737; GO:0005829; GO:0016075; GO:0017091; GO:0030307; GO:0031125; GO:0034427; GO:0034475; GO:0035327; GO:0045006; GO:0045111; GO:0051607; GO:0071028; GO:0071044; GO:0071051 TRINITY_DN4615_c1_g1_i1 0 26 0 111 32.40288343 8.293315516 2.4066893 3.445943569 0.000569069 0.036840743 1 sp Q9W422 JOSL_DROME 26.9 156 85 6 263 679 39 182 6.4e-07 58.2 JOSL_DROME reviewed Josephin-like protein (EC 3.4.19.12) CG3781 Drosophila melanogaster (Fruit fly) 221 protein deubiquitination [GO:0016579] thiol-dependent ubiquitin-specific protease activity [GO:0004843] thiol-dependent ubiquitin-specific protease activity [GO:0004843]; protein deubiquitination [GO:0016579] GO:0004843; GO:0016579 TRINITY_DN104797_c0_g1_i1 0 70 0 69 35.03767337 8.62291731 2.343669472 3.679237798 0.000233932 0.020254142 1 sp Q9CAX6 RS142_ARATH 84 150 24 0 50 499 1 150 8.3e-67 255 RS142_ARATH reviewed 40S ribosomal protein S14-2 RPS14B At3g11510 F24K9.19 Arabidopsis thaliana (Mouse-ear cress) 150 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; mature ribosome assembly [GO:0042256]; ribosomal small subunit assembly [GO:0000028]; ribosome assembly [GO:0042255]; translation [GO:0006412] cytosolic ribosome [GO:0022626]; cytosolic small ribosomal subunit [GO:0022627]; nucleolus [GO:0005730]; polysomal ribosome [GO:0042788] mRNA 5'-UTR binding [GO:0048027]; mRNA binding [GO:0003729]; small ribosomal subunit rRNA binding [GO:0070181]; structural constituent of ribosome [GO:0003735] cytosolic ribosome [GO:0022626]; cytosolic small ribosomal subunit [GO:0022627]; nucleolus [GO:0005730]; polysomal ribosome [GO:0042788]; mRNA 5'-UTR binding [GO:0048027]; mRNA binding [GO:0003729]; small ribosomal subunit rRNA binding [GO:0070181]; structural constituent of ribosome [GO:0003735]; maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; mature ribosome assembly [GO:0042256]; ribosomal small subunit assembly [GO:0000028]; ribosome assembly [GO:0042255]; translation [GO:0006412] GO:0000028; GO:0000462; GO:0003729; GO:0003735; GO:0005730; GO:0006412; GO:0022626; GO:0022627; GO:0042255; GO:0042256; GO:0042788; GO:0048027; GO:0070181 TRINITY_DN493_c0_g1_i10 0 84 0 152 57.76137026 9.328387463 2.042293587 4.567603561 4.93e-06 0.001811634 1 sp P35684 RL3_ORYSJ 68.4 380 116 3 2 1132 10 388 8e-152 538.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN14760_c0_g1_i2 0 66 0 113 43.92392696 8.940747719 2.194145707 4.074819503 4.61e-05 0.007056259 1 sp Q28BT8 DUS3L_XENTR 41.6 563 250 12 268 1812 107 638 5.2e-112 406.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN16439_c0_g1_i2 0 41 0 87 31.10224853 8.415567249 2.433776445 3.457822622 0.00054456 0.035798083 1 sp P87303 TFB2_SCHPO 34.2 111 68 2 1065 1385 287 396 5e-09 64.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2496_c0_g1_i1 0 67 0 185 60.55267373 9.31478594 2.020916765 4.609188315 4.04e-06 0.001655768 1 sp P78946 RL26_SCHPO 57.9 76 32 0 74 301 1 76 3.7e-16 85.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN13106_c0_g1_i1 0 81 0 114 48.30109633 9.092042304 2.137513791 4.253559598 2.1e-05 0.004227629 1 sp Q21355 GST4_CAEEL 29.3 208 136 4 35 646 3 203 5.8e-15 83.2 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN527_c14_g1_i2 0 32 0 111 34.0629063 8.430657658 2.367887723 3.560412758 0.000370272 0.027194586 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN7324_c0_g1_i1 0 29 0 118 34.82268006 8.411460164 2.353161624 3.57453567 0.00035085 0.02615765 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN4596_c0_g1_i5 0 23 0 107 30.6644233 8.185486646 2.449923654 3.341119071 0.000834414 0.045479627 1 sp Q9LZQ9 DEAH2_ARATH 61.2 688 257 3 727 2772 39 722 1.6e-252 874 DEAH2_ARATH reviewed Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 (EC 3.6.4.13) (DEAH RNA helicase homolog PRP43) At3g62310 T12C14_10 Arabidopsis thaliana (Mouse-ear cress) 726 mRNA processing [GO:0006397]; RNA processing [GO:0006396]; RNA splicing [GO:0008380] cytoplasm [GO:0005737]; cytosol [GO:0005829]; nucleolus [GO:0005730]; spliceosomal complex [GO:0005681] ATP binding [GO:0005524]; ATP-dependent RNA helicase activity [GO:0004004]; RNA binding [GO:0003723] cytoplasm [GO:0005737]; cytosol [GO:0005829]; nucleolus [GO:0005730]; spliceosomal complex [GO:0005681]; ATP binding [GO:0005524]; ATP-dependent RNA helicase activity [GO:0004004]; RNA binding [GO:0003723]; mRNA processing [GO:0006397]; RNA processing [GO:0006396]; RNA splicing [GO:0008380] GO:0003723; GO:0004004; GO:0005524; GO:0005681; GO:0005730; GO:0005737; GO:0005829; GO:0006396; GO:0006397; GO:0008380 TRINITY_DN4979_c0_g1_i1 0 27 0 103 30.86265654 8.261354855 2.443115902 3.381482985 0.000720957 0.042597624 1 sp Q8VYP6 NOL9_ARATH 28.4 296 180 10 416 1246 15 297 1.7e-18 95.9 NOL9_ARATH reviewed Polynucleotide 5'-hydroxyl-kinase NOL9 (EC 2.7.1.-) (Nucleolar protein 9 homolog) At5g11010 T30N20.280 Arabidopsis thaliana (Mouse-ear cress) 368 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000448]; rRNA processing [GO:0006364] nucleolus [GO:0005730]; nucleus [GO:0005634] ATP binding [GO:0005524]; polynucleotide 5'-hydroxyl-kinase activity [GO:0051731] nucleolus [GO:0005730]; nucleus [GO:0005634]; ATP binding [GO:0005524]; polynucleotide 5'-hydroxyl-kinase activity [GO:0051731]; cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000448]; rRNA processing [GO:0006364] GO:0000448; GO:0005524; GO:0005634; GO:0005730; GO:0006364; GO:0051731 TRINITY_DN10685_c0_g1_i2 0 73 0 149 54.03665847 9.215066708 2.076889454 4.4369558 9.12e-06 0.002650122 1 sp Q940B0 RL183_ARATH 61.1 193 69 1 36 614 1 187 1.3e-56 221.5 RL183_ARATH reviewed 60S ribosomal protein L18-3 RPL18C At5g27850 F14I23.10 Arabidopsis thaliana (Mouse-ear cress) 187 mature ribosome assembly [GO:0042256]; translation [GO:0006412] cytosol [GO:0005829]; cytosolic large ribosomal subunit [GO:0022625]; cytosolic ribosome [GO:0022626]; membrane [GO:0016020]; plasmodesma [GO:0009506]; vacuole [GO:0005773] mRNA binding [GO:0003729]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735] cytosol [GO:0005829]; cytosolic large ribosomal subunit [GO:0022625]; cytosolic ribosome [GO:0022626]; membrane [GO:0016020]; plasmodesma [GO:0009506]; vacuole [GO:0005773]; mRNA binding [GO:0003729]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]; mature ribosome assembly [GO:0042256]; translation [GO:0006412] GO:0003723; GO:0003729; GO:0003735; GO:0005773; GO:0005829; GO:0006412; GO:0009506; GO:0016020; GO:0022625; GO:0022626; GO:0042256 TRINITY_DN30747_c0_g1_i1 0 68 0 105 42.66037056 8.907838972 2.211977468 4.027092998 5.65e-05 0.008018463 1 sp Q54N38 UCHL5_DICDI 47.1 206 105 2 83 697 7 209 7.5e-46 186 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1447_c0_g1_i22 0 56 0 148 49.10614814 9.025750859 2.130209966 4.237024051 2.27e-05 0.004346183 1 sp P33188 TBB1_PARTE 93.6 437 28 0 61 1371 1 437 7.6e-249 861.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN10564_c0_g1_i1 0 37 0 85 29.54134227 8.327758098 2.474772418 3.365060172 0.00076527 0.043557514 1 sp O61585 KTNB1_STRPU 42 174 99 1 460 981 519 690 9.3e-34 147.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN63820_c0_g1_i1 358 91 172 3 158.2400916 -3.625447733 1.024618863 -3.538337876 0.000402654 0.028778985 2 sp Q90YR7 RS7_ICTPU 64.9 111 36 2 36 359 5 115 7e-30 131.3 RS7_ICTPU reviewed 40S ribosomal protein S7 rps7 Ictalurus punctatus (Channel catfish) (Silurus punctatus) 194 translation [GO:0006412] ribosome [GO:0005840] structural constituent of ribosome [GO:0003735] ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412] GO:0003735; GO:0005840; GO:0006412 TRINITY_DN9426_c0_g1_i20 0 83 0 118 49.76288598 9.134568033 2.120668233 4.307400796 1.65e-05 0.003703428 1 sp Q5PQL3 SPP2B_RAT 39.1 486 273 8 204 1637 22 492 1.7e-75 285.4 SPP2B_RAT reviewed Signal peptide peptidase-like 2B (SPP-like 2B) (SPPL2b) (EC 3.4.23.-) Sppl2b Rattus norvegicus (Rat) 577 membrane protein ectodomain proteolysis [GO:0006509]; membrane protein intracellular domain proteolysis [GO:0031293]; membrane protein proteolysis [GO:0033619]; regulation of immune response [GO:0050776] actin cytoskeleton [GO:0015629]; centrosome [GO:0005813]; endosome membrane [GO:0010008]; Golgi-associated vesicle membrane [GO:0030660]; Golgi membrane [GO:0000139]; integral component of cytoplasmic side of endoplasmic reticulum membrane [GO:0071458]; integral component of lumenal side of endoplasmic reticulum membrane [GO:0071556]; lysosomal membrane [GO:0005765]; membrane [GO:0016020]; nucleoplasm [GO:0005654]; plasma membrane [GO:0005886] aspartic endopeptidase activity, intramembrane cleaving [GO:0042500]; protein homodimerization activity [GO:0042803] actin cytoskeleton [GO:0015629]; centrosome [GO:0005813]; endosome membrane [GO:0010008]; Golgi membrane [GO:0000139]; Golgi-associated vesicle membrane [GO:0030660]; integral component of cytoplasmic side of endoplasmic reticulum membrane [GO:0071458]; integral component of lumenal side of endoplasmic reticulum membrane [GO:0071556]; lysosomal membrane [GO:0005765]; membrane [GO:0016020]; nucleoplasm [GO:0005654]; plasma membrane [GO:0005886]; aspartic endopeptidase activity, intramembrane cleaving [GO:0042500]; protein homodimerization activity [GO:0042803]; membrane protein ectodomain proteolysis [GO:0006509]; membrane protein intracellular domain proteolysis [GO:0031293]; membrane protein proteolysis [GO:0033619]; regulation of immune response [GO:0050776] GO:0000139; GO:0005654; GO:0005765; GO:0005813; GO:0005886; GO:0006509; GO:0010008; GO:0015629; GO:0016020; GO:0030660; GO:0031293; GO:0033619; GO:0042500; GO:0042803; GO:0050776; GO:0071458; GO:0071556 TRINITY_DN1815_c0_g1_i2 0 35 0 88 29.66933782 8.315959783 2.471695938 3.36447524 0.000766894 0.043557514 1 sp Q8NF37 PCAT1_HUMAN 32.6 288 169 7 543 1367 45 320 3e-31 139 PCAT1_HUMAN reviewed Lysophosphatidylcholine acyltransferase 1 (LPC acyltransferase 1) (LPCAT-1) (LysoPC acyltransferase 1) (EC 2.3.1.23) (1-acylglycerophosphocholine O-acyltransferase) (1-alkylglycerophosphocholine O-acetyltransferase) (EC 2.3.1.67) (Acetyl-CoA:lyso-platelet-activating factor acetyltransferase) (Acetyl-CoA:lyso-PAF acetyltransferase) (Lyso-PAF acetyltransferase) (LysoPAFAT) (Acyltransferase-like 2) (Phosphonoformate immuno-associated protein 3) LPCAT1 AYTL2 PFAAP3 Homo sapiens (Human) 534 negative regulation of phosphatidylcholine biosynthetic process [GO:2001246]; neutrophil degranulation [GO:0043312]; phosphatidic acid biosynthetic process [GO:0006654]; phosphatidylcholine acyl-chain remodeling [GO:0036151]; phosphatidylcholine biosynthetic process [GO:0006656]; phosphatidylglycerol acyl-chain remodeling [GO:0036148]; phospholipid biosynthetic process [GO:0008654]; positive regulation of protein catabolic process [GO:0045732]; retina development in camera-type eye [GO:0060041]; surfactant homeostasis [GO:0043129] azurophil granule membrane [GO:0035577]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]; Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; lipid particle [GO:0005811]; membrane [GO:0016020]; plasma membrane [GO:0005886] 1-acylglycerol-3-phosphate O-acyltransferase activity [GO:0003841]; 1-acylglycerophosphocholine O-acyltransferase activity [GO:0047184]; 1-alkenylglycerophosphocholine O-acyltransferase activity [GO:0047159]; 1-alkylglycerophosphocholine O-acetyltransferase activity [GO:0047192]; 1-alkylglycerophosphocholine O-acyltransferase activity [GO:0047191]; 2-acylglycerol-3-phosphate O-acyltransferase activity [GO:0047144]; calcium ion binding [GO:0005509] azurophil granule membrane [GO:0035577]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]; Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]; integral component of membrane [GO:0016021]; lipid particle [GO:0005811]; membrane [GO:0016020]; plasma membrane [GO:0005886]; 1-acylglycerol-3-phosphate O-acyltransferase activity [GO:0003841]; 1-acylglycerophosphocholine O-acyltransferase activity [GO:0047184]; 1-alkenylglycerophosphocholine O-acyltransferase activity [GO:0047159]; 1-alkylglycerophosphocholine O-acetyltransferase activity [GO:0047192]; 1-alkylglycerophosphocholine O-acyltransferase activity [GO:0047191]; 2-acylglycerol-3-phosphate O-acyltransferase activity [GO:0047144]; calcium ion binding [GO:0005509]; negative regulation of phosphatidylcholine biosynthetic process [GO:2001246]; neutrophil degranulation [GO:0043312]; phosphatidic acid biosynthetic process [GO:0006654]; phosphatidylcholine acyl-chain remodeling [GO:0036151]; phosphatidylcholine biosynthetic process [GO:0006656]; phosphatidylglycerol acyl-chain remodeling [GO:0036148]; phospholipid biosynthetic process [GO:0008654]; positive regulation of protein catabolic process [GO:0045732]; retina development in camera-type eye [GO:0060041]; surfactant homeostasis [GO:0043129] GO:0000139; GO:0003841; GO:0005509; GO:0005783; GO:0005789; GO:0005794; GO:0005811; GO:0005886; GO:0006654; GO:0006656; GO:0008654; GO:0016020; GO:0016021; GO:0035577; GO:0036148; GO:0036151; GO:0043129; GO:0043312; GO:0045732; GO:0047144; GO:0047159; GO:0047184; GO:0047191; GO:0047192; GO:0060041; GO:2001246 TRINITY_DN20621_c0_g1_i3 0 87 0 37 32.47348207 8.344435761 2.401638062 3.474476813 0.000511851 0.034203466 1 sp Q05B17 WDR48_XENTR 63 687 232 11 238 2271 1 674 3.7e-235 817 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN13033_c0_g1_i5 0 102 0 26 34.12530539 8.226320682 2.368477324 3.473252878 0.000514191 0.034224207 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2557_c0_g1_i7 0 44 0 149 46.01321455 8.865713922 2.169372993 4.086763294 4.37e-05 0.006800646 1 sp Q8WVB6 CTF18_HUMAN 29.3 379 206 11 511 1509 246 608 2.9e-23 112.5 CTF18_HUMAN reviewed Chromosome transmission fidelity protein 18 homolog (hCTF18) (CHL12) CHTF18 C16orf41 CTF18 Homo sapiens (Human) 975 cell cycle [GO:0007049]; DNA replication [GO:0006260]; positive regulation of DNA-directed DNA polymerase activity [GO:1900264] Ctf18 RFC-like complex [GO:0031390]; cytosol [GO:0005829]; membrane [GO:0016020]; nucleoplasm [GO:0005654] ATP binding [GO:0005524]; DNA binding [GO:0003677] Ctf18 RFC-like complex [GO:0031390]; cytosol [GO:0005829]; membrane [GO:0016020]; nucleoplasm [GO:0005654]; ATP binding [GO:0005524]; DNA binding [GO:0003677]; cell cycle [GO:0007049]; DNA replication [GO:0006260]; positive regulation of DNA-directed DNA polymerase activity [GO:1900264] GO:0003677; GO:0005524; GO:0005654; GO:0005829; GO:0006260; GO:0007049; GO:0016020; GO:0031390; GO:1900264 TRINITY_DN4_c0_g1_i32 0 101 0 69 43.61445825 8.889614587 2.198322342 4.043817605 5.26e-05 0.007778252 1 sp P0CG82 UBIQP_TETPY 98.7 305 4 0 57 971 1 305 3.8e-164 579.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN12414_c1_g1_i4 0 31 0 97 30.60666543 8.307619809 2.448224991 3.393323669 0.0006905 0.041662773 1 sp Q5XHF8 VIP2_XENLA 26.6 920 543 31 132 2738 58 896 1.8e-73 279.3 VIP2_XENLA reviewed Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 (EC 2.7.4.21) (EC 2.7.4.24) (Diphosphoinositol pentakisphosphate kinase 2) (Histidine acid phosphatase domain-containing protein 1) (InsP6 and PP-IP5 kinase 2) (VIP1 homolog 2) ppip5k2 hisppd1 vip2 Xenopus laevis (African clawed frog) 1131 inositol metabolic process [GO:0006020] cytosol [GO:0005829] acid phosphatase activity [GO:0003993]; ATP binding [GO:0005524]; diphosphoinositol-pentakisphosphate kinase activity [GO:0033857]; inositol-1,3,4,5,6-pentakisphosphate kinase activity [GO:0000827]; inositol hexakisphosphate 1-kinase activity [GO:0052723]; inositol hexakisphosphate 3-kinase activity [GO:0052724]; inositol hexakisphosphate 5-kinase activity [GO:0000832] cytosol [GO:0005829]; acid phosphatase activity [GO:0003993]; ATP binding [GO:0005524]; diphosphoinositol-pentakisphosphate kinase activity [GO:0033857]; inositol hexakisphosphate 1-kinase activity [GO:0052723]; inositol hexakisphosphate 3-kinase activity [GO:0052724]; inositol hexakisphosphate 5-kinase activity [GO:0000832]; inositol-1,3,4,5,6-pentakisphosphate kinase activity [GO:0000827]; inositol metabolic process [GO:0006020] GO:0000827; GO:0000832; GO:0003993; GO:0005524; GO:0005829; GO:0006020; GO:0033857; GO:0052723; GO:0052724 TRINITY_DN64_c0_g1_i35 182 0 23 0 53.27978453 -8.457477117 2.098366806 -4.030504626 5.57e-05 0.007955996 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN14376_c0_g1_i1 0 60 0 112 42.03679191 8.867352656 2.221700213 3.991246255 6.57e-05 0.008916682 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN20215_c0_g1_i1 0 61 0 104 40.49656503 8.824275631 2.245354388 3.930014646 8.49e-05 0.010397424 1 sp Q9CAX6 RS142_ARATH 84.7 150 23 0 47 496 1 150 2.3e-67 256.9 RS142_ARATH reviewed 40S ribosomal protein S14-2 RPS14B At3g11510 F24K9.19 Arabidopsis thaliana (Mouse-ear cress) 150 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; mature ribosome assembly [GO:0042256]; ribosomal small subunit assembly [GO:0000028]; ribosome assembly [GO:0042255]; translation [GO:0006412] cytosolic ribosome [GO:0022626]; cytosolic small ribosomal subunit [GO:0022627]; nucleolus [GO:0005730]; polysomal ribosome [GO:0042788] mRNA 5'-UTR binding [GO:0048027]; mRNA binding [GO:0003729]; small ribosomal subunit rRNA binding [GO:0070181]; structural constituent of ribosome [GO:0003735] cytosolic ribosome [GO:0022626]; cytosolic small ribosomal subunit [GO:0022627]; nucleolus [GO:0005730]; polysomal ribosome [GO:0042788]; mRNA 5'-UTR binding [GO:0048027]; mRNA binding [GO:0003729]; small ribosomal subunit rRNA binding [GO:0070181]; structural constituent of ribosome [GO:0003735]; maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; mature ribosome assembly [GO:0042256]; ribosomal small subunit assembly [GO:0000028]; ribosome assembly [GO:0042255]; translation [GO:0006412] GO:0000028; GO:0000462; GO:0003729; GO:0003735; GO:0005730; GO:0006412; GO:0022626; GO:0022627; GO:0042255; GO:0042256; GO:0042788; GO:0048027; GO:0070181 TRINITY_DN109346_c0_g1_i1 0 62 0 120 44.40703024 8.941214411 2.187822482 4.086809824 4.37e-05 0.006800646 1 sp P34091 RL6_MESCR 48.8 164 78 3 94 570 72 234 6.7e-31 135.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN239_c15_g1_i3 504 136 1233 400 530.4210377 -1.693933111 0.502007222 -3.374320202 0.000739982 0.042851867 3 sp C0KJQ4 ALPS_PORTR 67.5 123 40 0 79 447 1 123 4.3e-46 186.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN90_c1_g1_i4 0 30 0 94 29.64865844 8.261933669 2.473448979 3.340248269 0.000837035 0.045479627 1 sp Q9LT78 RD21C_ARATH 41.9 313 163 8 148 1062 43 344 1.8e-59 231.5 RD21C_ARATH reviewed Probable cysteine protease RD21C (EC 3.4.22.-) RD21C At3g19390 MLD14.12 Arabidopsis thaliana (Mouse-ear cress) 452 cysteine-type peptidase activity [GO:0008234] cysteine-type peptidase activity [GO:0008234] GO:0008234 TRINITY_DN17354_c0_g3_i1 0 51 0 117 40.68231845 8.78674533 2.243369555 3.916762315 8.97e-05 0.010816083 1 sp Q5KYR4 IOLA2_GEOKA 40.3 481 280 5 60 1484 5 484 1.6e-100 368.6 IOLA2_GEOKA reviewed Methylmalonate semialdehyde dehydrogenase [acylating] 2 (MMSA dehydrogenase 2) (MMSDH 2) (MSDH 2) (EC 1.2.1.27) (Malonate semialdehyde dehydrogenase [acetylating] 2) (MSA dehydrogenase 2) (EC 1.2.1.18) iolA2 GK1887 Geobacillus kaustophilus (strain HTA426) 484 malonate-semialdehyde dehydrogenase (acetylating) activity [GO:0018478]; methylmalonate-semialdehyde dehydrogenase (acylating) activity [GO:0004491] malonate-semialdehyde dehydrogenase (acetylating) activity [GO:0018478]; methylmalonate-semialdehyde dehydrogenase (acylating) activity [GO:0004491] GO:0004491; GO:0018478 TRINITY_DN29271_c0_g1_i23 106 1 175 0 66.46784119 -8.093962525 1.937725163 -4.177043618 2.95e-05 0.00518319 3 sp Q13127 REST_HUMAN 27 159 87 5 7109 7558 250 388 3e-07 61.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2756_c0_g1_i4 0 79 0 183 63.41849515 9.421585513 1.998087337 4.715302149 2.41e-06 0.001223944 1 sp Q6ICX4 PTBP3_ARATH 30.6 180 109 6 581 1114 35 200 1.2e-10 69.3 PTBP3_ARATH reviewed Polypyrimidine tract-binding protein homolog 3 At1g43190 F1I21.14 Arabidopsis thaliana (Mouse-ear cress) 432 mRNA processing [GO:0006397]; regulation of RNA splicing [GO:0043484]; regulation of translation [GO:0006417]; RNA splicing [GO:0008380] cytoplasm [GO:0005737]; nucleus [GO:0005634]; P-body [GO:0000932] mRNA binding [GO:0003729] cytoplasm [GO:0005737]; nucleus [GO:0005634]; P-body [GO:0000932]; mRNA binding [GO:0003729]; mRNA processing [GO:0006397]; regulation of RNA splicing [GO:0043484]; regulation of translation [GO:0006417]; RNA splicing [GO:0008380] GO:0000932; GO:0003729; GO:0005634; GO:0005737; GO:0006397; GO:0006417; GO:0008380; GO:0043484 TRINITY_DN525_c0_g2_i13 0 67 5 113 45.28844185 6.107337279 1.838009095 3.322800358 0.000891187 0.04772315 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN8494_c0_g1_i43 0 36 0 116 36.30514908 8.54277289 2.321799699 3.679375484 0.000233806 0.020254142 1 sp F4ISQ7 TOP3B_ARATH 48.1 54 23 1 219 365 472 525 3e-05 51.2 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN76264_c0_g1_i1 3 445 135 279 216.6502113 3.925870897 1.074681234 3.653056156 0.000259138 0.021228347 1 sp P29522 EF1B2_BOMMO 71.6 109 31 0 129 455 114 222 3.1e-38 159.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN234_c0_g2_i1 0 42 0 101 34.5584894 8.543610688 2.355276519 3.62743424 0.000286252 0.022749529 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN11683_c0_g1_i2 0 80 0 149 55.97335183 9.279378034 2.058301517 4.508269539 6.54e-06 0.002245276 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN11616_c0_g1_i1 0 74 0 155 55.67600197 9.253655619 2.061437126 4.488934201 7.16e-06 0.002315106 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2756_c0_g1_i1 0 43 0 99 34.38093554 8.544804441 2.358824245 3.622484575 0.000291787 0.023103228 1 sp Q6ICX4 PTBP3_ARATH 30.6 180 109 6 581 1114 35 200 1.4e-10 69.3 PTBP3_ARATH reviewed Polypyrimidine tract-binding protein homolog 3 At1g43190 F1I21.14 Arabidopsis thaliana (Mouse-ear cress) 432 mRNA processing [GO:0006397]; regulation of RNA splicing [GO:0043484]; regulation of translation [GO:0006417]; RNA splicing [GO:0008380] cytoplasm [GO:0005737]; nucleus [GO:0005634]; P-body [GO:0000932] mRNA binding [GO:0003729] cytoplasm [GO:0005737]; nucleus [GO:0005634]; P-body [GO:0000932]; mRNA binding [GO:0003729]; mRNA processing [GO:0006397]; regulation of RNA splicing [GO:0043484]; regulation of translation [GO:0006417]; RNA splicing [GO:0008380] GO:0000932; GO:0003729; GO:0005634; GO:0005737; GO:0006397; GO:0006417; GO:0008380; GO:0043484 TRINITY_DN71_c0_g1_i5 0 26 0 137 38.30779986 8.452429956 2.2893369 3.69208654 0.000222422 0.019904877 1 sp Q93050 VPP1_HUMAN 61.2 852 291 12 6268 8769 1 830 1.5e-290 1002.3 VPP1_HUMAN reviewed V-type proton ATPase 116 kDa subunit a isoform 1 (V-ATPase 116 kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar adenosine triphosphatase subunit Ac116) (Vacuolar proton pump subunit 1) (Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1) ATP6V0A1 ATP6N1 ATP6N1A VPP1 Homo sapiens (Human) 837 ATP hydrolysis coupled proton transport [GO:0015991]; ATP synthesis coupled proton transport [GO:0015986]; insulin receptor signaling pathway [GO:0008286]; ion transmembrane transport [GO:0034220]; neutrophil degranulation [GO:0043312]; phagosome acidification [GO:0090383]; regulation of macroautophagy [GO:0016241]; toxin transport [GO:1901998]; transferrin transport [GO:0033572]; vacuolar acidification [GO:0007035]; vacuolar proton-transporting V-type ATPase complex assembly [GO:0070072] cytosol [GO:0005829]; endosome membrane [GO:0010008]; extracellular exosome [GO:0070062]; ficolin-1-rich granule membrane [GO:0101003]; Golgi apparatus [GO:0005794]; integral component of membrane [GO:0016021]; intracellular membrane-bounded organelle [GO:0043231]; lysosomal membrane [GO:0005765]; melanosome [GO:0042470]; nuclear speck [GO:0016607]; phagocytic vesicle membrane [GO:0030670]; plasma membrane [GO:0005886]; secretory granule membrane [GO:0030667]; vacuolar proton-transporting V-type ATPase, V0 domain [GO:0000220]; vacuolar proton-transporting V-type ATPase complex [GO:0016471] ATPase binding [GO:0051117]; proton-transporting ATPase activity, rotational mechanism [GO:0046961] cytosol [GO:0005829]; endosome membrane [GO:0010008]; extracellular exosome [GO:0070062]; ficolin-1-rich granule membrane [GO:0101003]; Golgi apparatus [GO:0005794]; integral component of membrane [GO:0016021]; intracellular membrane-bounded organelle [GO:0043231]; lysosomal membrane [GO:0005765]; melanosome [GO:0042470]; nuclear speck [GO:0016607]; phagocytic vesicle membrane [GO:0030670]; plasma membrane [GO:0005886]; secretory granule membrane [GO:0030667]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]; vacuolar proton-transporting V-type ATPase, V0 domain [GO:0000220]; ATPase binding [GO:0051117]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]; ATP hydrolysis coupled proton transport [GO:0015991]; ATP synthesis coupled proton transport [GO:0015986]; insulin receptor signaling pathway [GO:0008286]; ion transmembrane transport [GO:0034220]; neutrophil degranulation [GO:0043312]; phagosome acidification [GO:0090383]; regulation of macroautophagy [GO:0016241]; toxin transport [GO:1901998]; transferrin transport [GO:0033572]; vacuolar acidification [GO:0007035]; vacuolar proton-transporting V-type ATPase complex assembly [GO:0070072] GO:0000220; GO:0005765; GO:0005794; GO:0005829; GO:0005886; GO:0007035; GO:0008286; GO:0010008; GO:0015986; GO:0015991; GO:0016021; GO:0016241; GO:0016471; GO:0016607; GO:0030667; GO:0030670; GO:0033572; GO:0034220; GO:0042470; GO:0043231; GO:0043312; GO:0046961; GO:0051117; GO:0070062; GO:0070072; GO:0090383; GO:0101003; GO:1901998 TRINITY_DN9764_c0_g1_i17 0 35 0 97 31.71334735 8.389233362 2.419972011 3.466665451 0.000526957 0.034856099 1 sp Q9C587 RFC1_ARATH 31.2 725 425 21 37 2085 191 883 1.9e-73 278.9 RFC1_ARATH reviewed Replication factor C subunit 1 (AtRFC1) (Activator 1 large subunit) (Activator 1 subunit 1) RFC1 At5g22010 T6G21 Arabidopsis thaliana (Mouse-ear cress) 956 cellular response to DNA damage stimulus [GO:0006974]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; regulation of chromatin silencing [GO:0031935]; regulation of histone H3-K9 methylation [GO:0051570]; reproduction [GO:0000003]; resolution of meiotic recombination intermediates [GO:0000712]; response to abscisic acid [GO:0009737] DNA replication factor C complex [GO:0005663]; nucleus [GO:0005634] ATP binding [GO:0005524]; DNA clamp loader activity [GO:0003689] DNA replication factor C complex [GO:0005663]; nucleus [GO:0005634]; ATP binding [GO:0005524]; DNA clamp loader activity [GO:0003689]; cellular response to DNA damage stimulus [GO:0006974]; DNA repair [GO:0006281]; DNA replication [GO:0006260]; regulation of chromatin silencing [GO:0031935]; regulation of histone H3-K9 methylation [GO:0051570]; reproduction [GO:0000003]; resolution of meiotic recombination intermediates [GO:0000712]; response to abscisic acid [GO:0009737] GO:0000003; GO:0000712; GO:0003689; GO:0005524; GO:0005634; GO:0005663; GO:0006260; GO:0006281; GO:0006974; GO:0009737; GO:0031935; GO:0051570 TRINITY_DN1373_c0_g1_i20 107 0 63 0 42.08870721 -8.745115162 2.220765982 -3.93788235 8.22e-05 0.010267863 2 sp Q502I9 FCHO2_DANRE 33.5 1019 487 13 105 3119 6 847 6.2e-137 490.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1667_c0_g2_i2 0 99 0 144 60.09453009 9.405289903 2.022265249 4.650868579 3.31e-06 0.001504594 1 sp P0A9Y8 CSPC_ECO57 59.4 69 26 2 68 274 1 67 4.8e-14 80.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN5341_c0_g1_i3 384 10 852 73 306.5710019 -4.272248386 0.705063664 -6.059379601 1.37e-09 5.82e-06 3 sp Q6DH69 FAH2A_DANRE 36.3 135 83 1 201 596 391 525 6.5e-15 82.8 FAH2A_DANRE reviewed Fatty-acid amide hydrolase 2-A (EC 3.5.1.99) faah2a zgc:92625 Danio rerio (Zebrafish) (Brachydanio rerio) 532 integral component of membrane [GO:0016021] anandamide amidohydrolase activity [GO:0103073]; oleamide hydrolase activity [GO:0102077] integral component of membrane [GO:0016021]; anandamide amidohydrolase activity [GO:0103073]; oleamide hydrolase activity [GO:0102077] GO:0016021; GO:0102077; GO:0103073 TRINITY_DN8534_c0_g1_i2 7 194 0 179 96.18390936 6.515530671 1.361171585 4.786707821 1.7e-06 0.001003061 1 sp O75844 FACE1_HUMAN 55.6 455 188 1 147 1469 16 470 6.9e-142 506.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2688_c0_g1_i6 0 59 0 88 36.30942934 8.677899668 2.318639974 3.742668015 0.000182077 0.017953944 1 sp Q8SQA4 CD97_BOVIN 27.7 213 146 5 4 639 527 732 4.2e-09 65.1 CD97_BOVIN reviewed CD97 antigen (CD antigen CD97) CD97 Bos taurus (Bovine) 734 cell adhesion [GO:0007155]; cell surface receptor signaling pathway [GO:0007166] integral component of membrane [GO:0016021]; plasma membrane [GO:0005886] calcium ion binding [GO:0005509]; G-protein coupled receptor activity [GO:0004930] integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; calcium ion binding [GO:0005509]; G-protein coupled receptor activity [GO:0004930]; cell adhesion [GO:0007155]; cell surface receptor signaling pathway [GO:0007166] GO:0004930; GO:0005509; GO:0005886; GO:0007155; GO:0007166; GO:0016021 TRINITY_DN15481_c0_g1_i1 0 54 0 159 51.05104106 9.053865593 2.109208278 4.292542225 1.77e-05 0.003762233 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN16384_c0_g1_i1 0 62 0 149 50.99328319 9.101166631 2.108737426 4.315931665 1.59e-05 0.003601143 1 sp Q8R2N2 UTP4_MOUSE 24.8 600 375 20 85 1773 8 568 7e-35 150.6 UTP4_MOUSE reviewed U3 small nucleolar RNA-associated protein 4 homolog (Cirhin) (Testis-expressed gene 292 protein) Utp4 Cirh1a Kiaa1988 Tex292 Mus musculus (Mouse) 686 maturation of SSU-rRNA [GO:0030490]; regulation of transcription, DNA-templated [GO:0006355]; transcription, DNA-templated [GO:0006351] chromosome [GO:0005694]; fibrillar center [GO:0001650]; nucleolus [GO:0005730]; t-UTP complex [GO:0034455] RNA binding [GO:0003723] chromosome [GO:0005694]; fibrillar center [GO:0001650]; nucleolus [GO:0005730]; t-UTP complex [GO:0034455]; RNA binding [GO:0003723]; maturation of SSU-rRNA [GO:0030490]; regulation of transcription, DNA-templated [GO:0006355]; transcription, DNA-templated [GO:0006351] GO:0001650; GO:0003723; GO:0005694; GO:0005730; GO:0006351; GO:0006355; GO:0030490; GO:0034455 TRINITY_DN5058_c1_g1_i5 0 86 0 202 69.67031975 9.553621705 1.955933951 4.88442961 1.04e-06 0.000737113 1 sp Q5ZLR4 ESRP2_CHICK 28.1 210 138 5 542 1165 214 412 2.7e-19 98.2 ESRP2_CHICK reviewed Epithelial splicing regulatory protein 2 (RNA-binding motif protein 35B) (RNA-binding protein 35B) ESRP2 RBM35B RCJMB04_5c3 Gallus gallus (Chicken) 701 mRNA processing [GO:0006397]; regulation of RNA splicing [GO:0043484]; RNA splicing [GO:0008380] nucleus [GO:0005634] mRNA binding [GO:0003729] nucleus [GO:0005634]; mRNA binding [GO:0003729]; mRNA processing [GO:0006397]; regulation of RNA splicing [GO:0043484]; RNA splicing [GO:0008380] GO:0003729; GO:0005634; GO:0006397; GO:0008380; GO:0043484 TRINITY_DN16462_c0_g2_i13 0 51 0 97 36.14007503 8.647594302 2.322493712 3.723409134 0.000196551 0.018688981 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN113091_c0_g1_i1 0 115 0 180 72.69729592 9.67461878 1.936470892 4.99600527 5.85e-07 0.000566651 1 sp Q98TF5 RL39_CHICK 77.6 49 11 0 36 182 1 49 1.1e-14 80.9 RL39_CHICK reviewed 60S ribosomal protein L39 RPL39 Gallus gallus (Chicken) 51 translation [GO:0006412] cytosolic large ribosomal subunit [GO:0022625] RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735] cytosolic large ribosomal subunit [GO:0022625]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412] GO:0003723; GO:0003735; GO:0006412; GO:0022625 TRINITY_DN5985_c0_g1_i3 0 42 0 77 29.1077973 8.341211299 2.485925244 3.355374954 0.000792575 0.04454103 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN10840_c0_g1_i2 134 0 218 0 82.97366338 -9.800374551 1.883974461 -5.201967837 1.97e-07 0.000381812 3 sp Q9Y2B0 CNPY2_HUMAN 32.5 169 110 1 378 884 7 171 6.7e-23 109.8 CNPY2_HUMAN reviewed Protein canopy homolog 2 (MIR-interacting saposin-like protein) (Putative secreted protein Zsig9) (Transmembrane protein 4) CNPY2 MSAP TMEM4 ZSIG9 UNQ1943/PRO4426 Homo sapiens (Human) 182 enzyme linked receptor protein signaling pathway [GO:0007167]; negative regulation of gene expression [GO:0010629]; positive regulation of low-density lipoprotein particle receptor biosynthetic process [GO:0045716]; regulation of low-density lipoprotein particle clearance [GO:0010988]; tissue development [GO:0009888] endoplasmic reticulum [GO:0005783]; integral component of plasma membrane [GO:0005887] endoplasmic reticulum [GO:0005783]; integral component of plasma membrane [GO:0005887]; enzyme linked receptor protein signaling pathway [GO:0007167]; negative regulation of gene expression [GO:0010629]; positive regulation of low-density lipoprotein particle receptor biosynthetic process [GO:0045716]; regulation of low-density lipoprotein particle clearance [GO:0010988]; tissue development [GO:0009888] GO:0005783; GO:0005887; GO:0007167; GO:0009888; GO:0010629; GO:0010988; GO:0045716 TRINITY_DN26743_c0_g1_i5 0 108 0 101 52.81874107 9.210625484 2.087871855 4.411489843 1.03e-05 0.002803324 1 sp P04069 CBPB_ASTAS 38.8 309 177 7 457 1371 1 301 1e-55 219.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN88138_c0_g1_i6 0 33 0 123 37.06492283 8.52852954 2.308474194 3.694444392 0.000220368 0.019904877 1 sp O88759 KCNS3_RAT 31.8 242 134 4 340 1017 187 413 6.8e-18 93.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN6564_c0_g1_i1 0 55 0 213 63.59176875 9.282751575 2.000173295 4.64097366 3.47e-06 0.001504594 1 sp Q6P5B0 RRP12_MOUSE 22.7 1254 822 39 59 3649 116 1279 6.6e-33 144.8 RRP12_MOUSE reviewed RRP12-like protein Rrp12 Kiaa0690 Mus musculus (Mouse) 1295 integral component of membrane [GO:0016021]; nuclear membrane [GO:0031965]; nucleolus [GO:0005730] RNA binding [GO:0003723] integral component of membrane [GO:0016021]; nuclear membrane [GO:0031965]; nucleolus [GO:0005730]; RNA binding [GO:0003723] GO:0003723; GO:0005730; GO:0016021; GO:0031965 TRINITY_DN726_c0_g1_i3 0 108 0 205 76.43840682 9.724952612 1.916409813 5.074568366 3.88e-07 0.000393906 1 sp P18445 RL27A_RAT 61.5 148 56 1 39 479 1 148 3.4e-47 189.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN3835_c2_g1_i9 23 107 0 192 79.31005343 5.197954618 1.523470061 3.411917798 0.000645076 0.039709439 1 sp P89116 CASP1_SPOFR 41.4 278 154 4 253 1074 24 296 9.6e-54 214.2 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1804_c1_g1_i20 3411 1676 1544 128 1733.467937 -2.228873262 0.499441347 -4.462732762 8.09e-06 0.002427515 2 sp Q9YHV4 FSTA_DANRE 43.1 51 26 2 172 324 122 169 9.9e-05 48.9 FSTA_DANRE reviewed Follistatin-A (FS) (Activin-binding protein) (Follistatin-1) (zFst1) fsta fst fst1 si:dkey-111k10.2 si:dkeyp-88a5.1 Danio rerio (Zebrafish) (Brachydanio rerio) 322 determination of dorsal identity [GO:0048263]; dorsal/ventral pattern formation [GO:0009953]; embryonic viscerocranium morphogenesis [GO:0048703]; midbrain development [GO:0030901]; oocyte differentiation [GO:0009994]; otic placode formation [GO:0043049] extracellular region [GO:0005576] extracellular region [GO:0005576]; determination of dorsal identity [GO:0048263]; dorsal/ventral pattern formation [GO:0009953]; embryonic viscerocranium morphogenesis [GO:0048703]; midbrain development [GO:0030901]; oocyte differentiation [GO:0009994]; otic placode formation [GO:0043049] GO:0005576; GO:0009953; GO:0009994; GO:0030901; GO:0043049; GO:0048263; GO:0048703 TRINITY_DN1556_c0_g1_i1 0 19 0 145 38.18800387 8.293433697 2.296202905 3.611803504 0.000304075 0.023508942 1 sp Q54WR9 GLNA3_DICDI 37.5 704 395 10 298 2319 45 733 1.7e-127 458.8 GLNA3_DICDI reviewed Type-3 glutamine synthetase (EC 6.3.1.2) (Type-3 glutamate--ammonia ligase) (Type-3 GS) glnA3 glnB DDB_G0279591 Dictyostelium discoideum (Slime mold) 735 nitrogen compound metabolic process [GO:0006807]; response to bacterium [GO:0009617] phagocytic vesicle [GO:0045335] ATP binding [GO:0005524]; glutamate-ammonia ligase activity [GO:0004356] phagocytic vesicle [GO:0045335]; ATP binding [GO:0005524]; glutamate-ammonia ligase activity [GO:0004356]; nitrogen compound metabolic process [GO:0006807]; response to bacterium [GO:0009617] GO:0004356; GO:0005524; GO:0006807; GO:0009617; GO:0045335 TRINITY_DN14532_c0_g1_i10 0 54 0 118 41.73944206 8.832612565 2.226736036 3.966618595 7.29e-05 0.009217134 1 sp Q6MDI2 PNP_PARUW 43.3 615 333 7 1013 2854 18 617 2e-124 449.1 PNP_PARUW reviewed Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase) pnp pc0643 Protochlamydia amoebophila (strain UWE25) 697 mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396] cytoplasm [GO:0005737] 3'-5'-exoribonuclease activity [GO:0000175]; metal ion binding [GO:0046872]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723] cytoplasm [GO:0005737]; 3'-5'-exoribonuclease activity [GO:0000175]; metal ion binding [GO:0046872]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723]; mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396] GO:0000175; GO:0003723; GO:0004654; GO:0005737; GO:0006396; GO:0006402; GO:0046872 TRINITY_DN20632_c0_g1_i1 0 36 0 93 31.08156915 8.376640575 2.435141095 3.439899475 0.00058193 0.037398902 1 sp Q9LYZ9 PP362_ARATH 22.8 473 340 12 350 1738 361 818 2.7e-26 122.1 PP362_ARATH reviewed Pentatricopeptide repeat-containing protein At5g02860 At5g02860 F9G14_170 Arabidopsis thaliana (Mouse-ear cress) 819 RNA modification [GO:0009451] intracellular membrane-bounded organelle [GO:0043231] endonuclease activity [GO:0004519]; RNA binding [GO:0003723] intracellular membrane-bounded organelle [GO:0043231]; endonuclease activity [GO:0004519]; RNA binding [GO:0003723]; RNA modification [GO:0009451] GO:0003723; GO:0004519; GO:0009451; GO:0043231 TRINITY_DN90_c1_g1_i3 0 68 0 118 45.61282878 8.993595721 2.171384513 4.141871543 3.44e-05 0.005687713 1 sp Q9LT78 RD21C_ARATH 41.9 313 163 8 127 1041 43 344 1.8e-59 231.5 RD21C_ARATH reviewed Probable cysteine protease RD21C (EC 3.4.22.-) RD21C At3g19390 MLD14.12 Arabidopsis thaliana (Mouse-ear cress) 452 cysteine-type peptidase activity [GO:0008234] cysteine-type peptidase activity [GO:0008234] GO:0008234 TRINITY_DN9157_c1_g1_i1 0 83 0 132 52.94245637 9.216547984 2.087018971 4.416130428 1e-05 0.002779477 1 sp Q8IVL1 NAV2_HUMAN 47.9 900 366 23 5323 7950 1668 2488 1.8e-194 682.9 NAV2_HUMAN reviewed Neuron navigator 2 (EC 3.6.4.12) (Helicase APC down-regulated 1) (Pore membrane and/or filament-interacting-like protein 2) (Retinoic acid inducible in neuroblastoma 1) (Steerin-2) (Unc-53 homolog 2) (unc53H2) NAV2 HELAD1 KIAA1419 POMFIL2 RAINB1 STEERIN2 Homo sapiens (Human) 2488 glossopharyngeal nerve development [GO:0021563]; locomotory behavior [GO:0007626]; optic nerve development [GO:0021554]; regulation of systemic arterial blood pressure by baroreceptor feedback [GO:0003025]; sensory perception of smell [GO:0007608]; sensory perception of sound [GO:0007605]; vagus nerve development [GO:0021564] interstitial matrix [GO:0005614]; nucleoplasm [GO:0005654] ATP binding [GO:0005524]; helicase activity [GO:0004386]; heparin binding [GO:0008201] interstitial matrix [GO:0005614]; nucleoplasm [GO:0005654]; ATP binding [GO:0005524]; helicase activity [GO:0004386]; heparin binding [GO:0008201]; glossopharyngeal nerve development [GO:0021563]; locomotory behavior [GO:0007626]; optic nerve development [GO:0021554]; regulation of systemic arterial blood pressure by baroreceptor feedback [GO:0003025]; sensory perception of smell [GO:0007608]; sensory perception of sound [GO:0007605]; vagus nerve development [GO:0021564] GO:0003025; GO:0004386; GO:0005524; GO:0005614; GO:0005654; GO:0007605; GO:0007608; GO:0007626; GO:0008201; GO:0021554; GO:0021563; GO:0021564 TRINITY_DN2510_c0_g1_i10 0 25 0 103 30.30931558 8.210804594 2.457955749 3.34050139 0.000836273 0.045479627 1 sp Q5HZH7 S38A8_MOUSE 25.9 386 248 11 285 1418 31 386 9.8e-22 106.7 S38A8_MOUSE reviewed Putative sodium-coupled neutral amino acid transporter 8 (Solute carrier family 38 member 8) Slc38a8 Gm587 Mus musculus (Mouse) 432 amino acid transmembrane transport [GO:0003333]; sodium ion transport [GO:0006814] integral component of membrane [GO:0016021] amino acid transmembrane transporter activity [GO:0015171] integral component of membrane [GO:0016021]; amino acid transmembrane transporter activity [GO:0015171]; amino acid transmembrane transport [GO:0003333]; sodium ion transport [GO:0006814] GO:0003333; GO:0006814; GO:0015171; GO:0016021 TRINITY_DN1108_c0_g1_i1 0 81 0 88 42.39617989 8.903765306 2.215545673 4.018768565 5.85e-05 0.00818453 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2278_c0_g1_i12 0 48 0 100 35.99140011 8.628128427 2.325689365 3.709922984 0.000207322 0.019282785 1 sp Q16JS8 SPNE_AEDAE 30.1 685 413 17 166 2142 9 653 1.3e-74 283.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN6967_c0_g1_i3 64 0 126 0 44.38974936 -8.876873036 2.187990297 -4.057089762 4.97e-05 0.007452848 3 sp P14562 LAMP1_RAT 29.7 229 129 7 307 978 206 407 9.1e-15 83.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN6834_c0_g1_i29 0 109 0 163 67.17636613 9.564161124 1.970486712 4.853704958 1.21e-06 0.000832557 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN14959_c1_g1_i27 24 0 218 0 53.79604234 -8.625801212 2.09392245 -4.119446359 3.8e-05 0.006174821 3 sp P51610 HCFC1_HUMAN 73.6 402 101 3 64 1257 8 408 9.9e-189 662.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN14959_c1_g1_i27 24 0 218 0 53.79604234 -8.625801212 2.09392245 -4.119446359 3.8e-05 0.006174821 3 sp P51610 HCFC1_HUMAN 55.5 236 98 3 3145 3852 1807 2035 1.4e-65 253.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN20212_c0_g1_i1 0 34 0 107 33.70779858 8.44358517 2.374909302 3.555329529 0.000377506 0.027630559 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN104405_c3_g1_i1 22753 11074 19626 6920 14940.73025 -1.209921723 0.261140256 -4.633225607 3.6e-06 0.001504594 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN11251_c0_g1_i2 0 42 0 125 40.00918149 8.703028576 2.255564824 3.85846972 0.000114099 0.01292659 1 sp Q9U2R0 BIN3D_CAEEL 30.7 251 121 8 572 1174 117 364 2.7e-26 121.3 BIN3D_CAEEL reviewed Probable RNA methyltransferase Y17G7B.18 (EC 2.1.1.-) Y17G7B.18 Caenorhabditis elegans 378 methyltransferase activity [GO:0008168] methyltransferase activity [GO:0008168] GO:0008168 TRINITY_DN104441_c0_g1_i1 0 39 0 93 31.91158059 8.431157977 2.414478288 3.491917081 0.000479567 0.03273814 1 sp O94365 UTP15_SCHPO 26.8 489 336 9 113 1558 16 489 1.3e-39 166 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN9542_c1_g1_i1 0 74 0 178 60.8995819 9.355509316 2.017443664 4.637308829 3.53e-06 0.001504594 1 sp P09446 HSP7A_CAEEL 88 83 10 0 3 251 135 217 2.3e-35 149.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN12630_c0_g1_i1 0 39 0 94 32.13869276 8.439171225 2.40912374 3.503004467 0.000460042 0.031710127 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN30662_c0_g1_i1 0 41 0 81 29.7395755 8.362241014 2.468848009 3.387102399 0.00070635 0.042259979 1 sp P52434 RPAB3_HUMAN 32.2 146 91 3 61 480 4 147 4.7e-16 86.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN101360_c1_g1_i1 0 46 0 77 30.21447922 8.404570689 2.455795236 3.422341801 0.000620842 0.038703367 1 sp Q4HXF6 PPID_GIBZE 57 172 68 4 167 682 14 179 4.8e-49 196.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN21521_c0_g1_i1 0 32 0 124 37.01536452 8.514123456 2.309712236 3.686226934 0.000227603 0.020031922 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN4320_c2_g1_i8 108 0 126 10 58.33191948 -5.618645819 1.637408969 -3.431424847 0.000600419 0.037919042 3 sp P98083 SHC1_MOUSE 41.1 492 216 10 1097 2509 139 577 1.8e-85 319.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN15905_c0_g1_i2 0 84 0 64 37.77549924 8.701440535 2.291277288 3.797637493 0.000146082 0.01532707 1 sp Q9SJ36 RS172_ARATH 64.3 140 43 1 58 456 1 140 3.7e-43 176 RS172_ARATH reviewed 40S ribosomal protein S17-2 RPS17B At2g05220 F5G3.12 Arabidopsis thaliana (Mouse-ear cress) 140 mature ribosome assembly [GO:0042256]; ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412] cytosolic small ribosomal subunit [GO:0022627] structural constituent of ribosome [GO:0003735] cytosolic small ribosomal subunit [GO:0022627]; structural constituent of ribosome [GO:0003735]; mature ribosome assembly [GO:0042256]; ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412] GO:0000028; GO:0003735; GO:0006412; GO:0022627; GO:0042256 TRINITY_DN5952_c0_g1_i3 0 74 0 64 35.00879444 8.609117639 2.344326357 3.672320457 0.000240358 0.02055978 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2751_c1_g2_i5 0 42 0 88 31.60603118 8.440695564 2.421319667 3.48598976 0.00049032 0.0331534 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2847_c1_g1_i1 0 48 0 144 45.98433562 8.899555827 2.168928862 4.10320319 4.07e-05 0.00647663 1 sp Q7PC79 XPOT_ARATH 21.1 786 555 24 307 2529 55 820 1.2e-19 100.5 XPOT_ARATH reviewed Exportin-T (Exportin(tRNA)) (Protein PAUSED) (tRNA exportin) PSD At1g72560 F28P22.25 Arabidopsis thaliana (Mouse-ear cress) 988 flower development [GO:0009908]; meristem initiation [GO:0010014]; tRNA export from nucleus [GO:0006409]; tRNA processing [GO:0008033]; tRNA re-export from nucleus [GO:0071528] cytosol [GO:0005829]; nuclear matrix [GO:0016363] nucleocytoplasmic transporter activity [GO:0005487]; Ran GTPase binding [GO:0008536]; tRNA binding [GO:0000049] cytosol [GO:0005829]; nuclear matrix [GO:0016363]; nucleocytoplasmic transporter activity [GO:0005487]; Ran GTPase binding [GO:0008536]; tRNA binding [GO:0000049]; flower development [GO:0009908]; meristem initiation [GO:0010014]; tRNA export from nucleus [GO:0006409]; tRNA processing [GO:0008033]; tRNA re-export from nucleus [GO:0071528] GO:0000049; GO:0005487; GO:0005829; GO:0006409; GO:0008033; GO:0008536; GO:0009908; GO:0010014; GO:0016363; GO:0071528 TRINITY_DN30373_c0_g1_i1 0 34 0 103 32.7993499 8.414883866 2.394959638 3.51358066 0.00044211 0.03077289 1 sp Q9Y4C8 RBM19_HUMAN 34 567 298 12 752 2305 401 940 2.9e-80 301.6 RBM19_HUMAN reviewed Probable RNA-binding protein 19 (RNA-binding motif protein 19) RBM19 KIAA0682 Homo sapiens (Human) 960 multicellular organism development [GO:0007275]; positive regulation of embryonic development [GO:0040019] chromosome [GO:0005694]; cytoplasm [GO:0005737]; membrane [GO:0016020]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654] RNA binding [GO:0003723] chromosome [GO:0005694]; cytoplasm [GO:0005737]; membrane [GO:0016020]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]; RNA binding [GO:0003723]; multicellular organism development [GO:0007275]; positive regulation of embryonic development [GO:0040019] GO:0003723; GO:0005654; GO:0005694; GO:0005730; GO:0005737; GO:0007275; GO:0016020; GO:0040019 TRINITY_DN205_c7_g1_i11 207 31 111 0 87.63390839 -4.911698653 1.412412066 -3.47752527 0.000506065 0.034002163 2 sp Q9VLS1 KPBB_DROME 68.2 730 218 2 314 2503 36 751 8.3e-294 1011.9 KPBB_DROME reviewed Probable phosphorylase b kinase regulatory subunit beta (Phosphorylase kinase subunit beta) CG8475 Drosophila melanogaster (Fruit fly) 1093 glycogen metabolic process [GO:0005977]; protein phosphorylation [GO:0006468] phosphorylase kinase complex [GO:0005964]; plasma membrane [GO:0005886] calmodulin binding [GO:0005516]; catalytic activity [GO:0003824] phosphorylase kinase complex [GO:0005964]; plasma membrane [GO:0005886]; calmodulin binding [GO:0005516]; catalytic activity [GO:0003824]; glycogen metabolic process [GO:0005977]; protein phosphorylation [GO:0006468] GO:0003824; GO:0005516; GO:0005886; GO:0005964; GO:0005977; GO:0006468 TRINITY_DN205_c7_g1_i11 207 31 111 0 87.63390839 -4.911698653 1.412412066 -3.47752527 0.000506065 0.034002163 2 sp Q9VLS1 KPBB_DROME 45.9 303 142 4 2481 3326 792 1093 7.2e-64 248.1 KPBB_DROME reviewed Probable phosphorylase b kinase regulatory subunit beta (Phosphorylase kinase subunit beta) CG8475 Drosophila melanogaster (Fruit fly) 1093 glycogen metabolic process [GO:0005977]; protein phosphorylation [GO:0006468] phosphorylase kinase complex [GO:0005964]; plasma membrane [GO:0005886] calmodulin binding [GO:0005516]; catalytic activity [GO:0003824] phosphorylase kinase complex [GO:0005964]; plasma membrane [GO:0005886]; calmodulin binding [GO:0005516]; catalytic activity [GO:0003824]; glycogen metabolic process [GO:0005977]; protein phosphorylation [GO:0006468] GO:0003824; GO:0005516; GO:0005886; GO:0005964; GO:0005977; GO:0006468 TRINITY_DN4842_c0_g1_i1 0 59 0 88 36.30942934 8.677899668 2.318639974 3.742668015 0.000182077 0.017953944 1 sp Q9S7U0 INO1_WHEAT 68 510 158 2 67 1581 1 510 5.7e-207 722.2 INO1_WHEAT reviewed Inositol-3-phosphate synthase (MIP synthase) (EC 5.5.1.4) (Myo-inositol 1-phosphate synthase) (IPS) (MI-1-P synthase) MIPS Triticum aestivum (Wheat) 510 inositol biosynthetic process [GO:0006021]; phospholipid biosynthetic process [GO:0008654] cytoplasm [GO:0005737] inositol-3-phosphate synthase activity [GO:0004512] cytoplasm [GO:0005737]; inositol-3-phosphate synthase activity [GO:0004512]; inositol biosynthetic process [GO:0006021]; phospholipid biosynthetic process [GO:0008654] GO:0004512; GO:0005737; GO:0006021; GO:0008654 TRINITY_DN1571_c2_g1_i11 0 60 0 87 36.35898765 8.681388359 2.317636427 3.745793886 0.000179824 0.017953944 1 sp P45335 Y1706_HAEIN 30.6 630 294 10 352 2235 8 496 7.2e-79 297.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN28910_c0_g1_i4 0 39 0 143 43.26718913 8.753482204 2.207214349 3.965850534 7.31e-05 0.009217134 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN8561_c2_g1_i1 0 47 0 78 30.71826187 8.429156415 2.44275616 3.45067451 0.000559188 0.036311387 1 sp Q9FMU5 UTP18_ARATH 33.7 419 263 7 82 1299 127 543 2.2e-62 241.5 UTP18_ARATH reviewed U3 small nucleolar RNA-associated protein 18 homolog At5g14050 MUA22.5 Arabidopsis thaliana (Mouse-ear cress) 546 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462] Cul4-RING E3 ubiquitin ligase complex [GO:0080008]; Pwp2p-containing subcomplex of 90S preribosome [GO:0034388]; small-subunit processome [GO:0032040] Cul4-RING E3 ubiquitin ligase complex [GO:0080008]; Pwp2p-containing subcomplex of 90S preribosome [GO:0034388]; small-subunit processome [GO:0032040]; maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462] GO:0000462; GO:0032040; GO:0034388; GO:0080008 TRINITY_DN18645_c0_g1_i1 0 42 0 88 31.60603118 8.440695564 2.421319667 3.48598976 0.00049032 0.0331534 1 sp Q3UMC0 AFG2H_MOUSE 46.8 570 270 9 640 2274 326 887 1.1e-142 508.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN9349_c0_g1_i7 0 26 0 129 36.4909025 8.407059122 2.321955672 3.620680284 0.000293829 0.023107099 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2038_c1_g1_i1 0 53 0 72 31.01561173 8.454802413 2.434869716 3.472383906 0.000515858 0.034228228 1 sp P0CT60 RL23A_SCHPO 71.9 139 38 1 45 458 1 139 9.3e-50 198.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN377_c0_g1_i4 0 57 0 73 32.34940582 8.516552603 2.402269705 3.545210842 0.000392299 0.028420339 1 sp O77302 RS10_LUMRU 53.9 102 44 1 69 365 1 102 8.5e-25 115.2 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN15144_c0_g1_i9 106 1 97 0 49.49746852 -7.709859532 2.020941941 -3.814983189 0.000136192 0.014799785 3 sp Q6P4R8 NFRKB_HUMAN 48.4 318 147 5 1603 2556 363 663 1.6e-80 303.1 NFRKB_HUMAN reviewed Nuclear factor related to kappa-B-binding protein (DNA-binding protein R kappa-B) (INO80 complex subunit G) NFRKB INO80G Homo sapiens (Human) 1299 DNA recombination [GO:0006310]; DNA repair [GO:0006281]; inflammatory response [GO:0006954]; protein deubiquitination [GO:0016579]; regulation of transcription, DNA-templated [GO:0006355]; transcription from RNA polymerase II promoter [GO:0006366] Ino80 complex [GO:0031011]; nucleoplasm [GO:0005654]; nucleus [GO:0005634] DNA binding [GO:0003677]; protease binding [GO:0002020] Ino80 complex [GO:0031011]; nucleoplasm [GO:0005654]; nucleus [GO:0005634]; DNA binding [GO:0003677]; protease binding [GO:0002020]; DNA recombination [GO:0006310]; DNA repair [GO:0006281]; inflammatory response [GO:0006954]; protein deubiquitination [GO:0016579]; regulation of transcription, DNA-templated [GO:0006355]; transcription from RNA polymerase II promoter [GO:0006366] GO:0002020; GO:0003677; GO:0005634; GO:0005654; GO:0006281; GO:0006310; GO:0006355; GO:0006366; GO:0006954; GO:0016579; GO:0031011 TRINITY_DN70_c0_g1_i13 553 144 572 128 340.0441651 -1.989040721 0.599212457 -3.319424853 0.000902031 0.047911107 3 sp P06800 PTPRC_MOUSE 28.2 607 376 17 1422 3080 620 1220 2e-59 233.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2569_c0_g1_i4 0 20 0 117 32.10553357 8.163610439 2.417053426 3.377505168 0.000731466 0.042851867 1 sp A6SFG0 CLU_BOTFB 26 131 97 0 2420 2812 997 1127 1.2e-06 57.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN33929_c2_g2_i2 1 86 0 81 42.4549982 7.563217319 2.103026572 3.59634891 0.000322715 0.024636216 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1470_c0_g1_i7 89 0 108 0 47.10478702 -8.997117802 2.151569136 -4.181654055 2.89e-05 0.00518319 3 sp O97172 U729_DROME 39.8 83 40 2 237 479 1 75 9.8e-10 68.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2622_c0_g1_i13 0 55 0 183 56.77840363 9.170592591 2.053948697 4.464859617 8.01e-06 0.002427515 1 sp P21187 PABP_DROME 29 183 107 4 1161 1697 81 244 4.2e-09 65.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN4189_c0_g1_i13 0 19 0 127 34.0999848 8.193279961 2.373665472 3.451741644 0.000556981 0.036278695 1 sp P16521 EF3A_YEAST 35.8 991 572 17 113 3013 53 1003 2.9e-165 584.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN9696_c0_g1_i1 0 44 0 97 34.20338167 8.545381797 2.362397675 3.617249494 0.00029775 0.023315379 1 sp O14325 YB7A_SCHPO 49.8 615 250 7 568 2235 155 769 9.2e-158 558.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN18195_c0_g1_i1 0 38 0 102 33.67891965 8.482730105 2.37462255 3.572243557 0.000353936 0.026266491 1 sp Q9SZY1 NACA4_ARATH 55.3 150 61 1 171 602 63 212 5.6e-35 149.4 NACA4_ARATH reviewed Nascent polypeptide-associated complex subunit alpha-like protein 4 (NAC-alpha-like protein 4) (Alpha-NAC-like protein 4) At4g10480 F7L13.60 Arabidopsis thaliana (Mouse-ear cress) 212 protein transport [GO:0015031] nascent polypeptide-associated complex [GO:0005854] nascent polypeptide-associated complex [GO:0005854]; protein transport [GO:0015031] GO:0005854; GO:0015031 TRINITY_DN670_c0_g1_i5 0 116 0 140 63.88947957 9.49804062 1.99287149 4.766007577 1.88e-06 0.001037731 1 sp P0CT58 RS22A_SCHPO 81.8 33 6 0 48 146 1 33 1.2e-07 58.2 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1430_c0_g1_i1 0 43 1 197 56.85549714 7.788796981 1.864450244 4.177530083 2.95e-05 0.00518319 1 sp Q8K4K3 TRIB2_MOUSE 48.7 273 131 6 327 1127 40 309 1.5e-63 246.9 TRIB2_MOUSE reviewed Tribbles homolog 2 (TRB-2) Trib2 Mus musculus (Mouse) 343 negative regulation of fat cell differentiation [GO:0045599]; negative regulation of interleukin-10 biosynthetic process [GO:0045081]; negative regulation of sequence-specific DNA binding transcription factor activity [GO:0043433]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of ubiquitin-protein transferase activity [GO:0051443]; regulation of MAP kinase activity [GO:0043405] cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; nucleus [GO:0005634] mitogen-activated protein kinase kinase binding [GO:0031434]; protein kinase inhibitor activity [GO:0004860]; transcription factor binding [GO:0008134]; ubiquitin protein ligase binding [GO:0031625]; ubiquitin-protein transferase regulator activity [GO:0055106] cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; nucleus [GO:0005634]; mitogen-activated protein kinase kinase binding [GO:0031434]; protein kinase inhibitor activity [GO:0004860]; transcription factor binding [GO:0008134]; ubiquitin protein ligase binding [GO:0031625]; ubiquitin-protein transferase regulator activity [GO:0055106]; negative regulation of fat cell differentiation [GO:0045599]; negative regulation of interleukin-10 biosynthetic process [GO:0045081]; negative regulation of sequence-specific DNA binding transcription factor activity [GO:0043433]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; positive regulation of ubiquitin-protein transferase activity [GO:0051443]; regulation of MAP kinase activity [GO:0043405] GO:0004860; GO:0005634; GO:0005737; GO:0005856; GO:0008134; GO:0031434; GO:0031625; GO:0032436; GO:0043405; GO:0043433; GO:0045081; GO:0045599; GO:0051443; GO:0055106 TRINITY_DN1447_c0_g1_i28 0 31 0 124 36.73869404 8.493029353 2.315170903 3.668424366 0.00024405 0.02073252 1 sp P33188 TBB1_PARTE 93.6 437 28 0 61 1371 1 437 7.3e-249 861.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN16224_c0_g1_i1 0 32 0 92 29.74777506 8.288918874 2.470268052 3.355473454 0.000792293 0.04454103 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN3547_c1_g1_i3 0 59 0 216 65.37978719 9.341235803 1.986955856 4.701279988 2.59e-06 0.001251489 1 sp P09189 HSP7C_PETHY 75.3 89 22 0 2 268 39 127 3e-33 142.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN173_c0_g1_i4 0 105 0 43 38.81622373 8.58790587 2.274980757 3.77493561 0.000160049 0.016546295 1 sp P31007 DLG1_DROME 60.9 778 238 12 155 2323 204 970 2.6e-251 870.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN14_c0_g1_i18 0 49 0 67 28.77336895 8.3464562 2.494736457 3.345626419 0.000820969 0.045479627 1 sp Q7ZVR8 ESRP2_DANRE 32.9 328 188 10 53 1000 225 532 3.7e-34 147.9 ESRP2_DANRE reviewed Epithelial splicing regulatory protein 2 (RNA-binding motif protein 35B) (RNA-binding protein 35B) esrp2 rbm35b zgc:77254 Danio rerio (Zebrafish) (Brachydanio rerio) 736 mRNA processing [GO:0006397]; regulation of RNA splicing [GO:0043484]; RNA splicing [GO:0008380] nucleus [GO:0005634] mRNA binding [GO:0003729] nucleus [GO:0005634]; mRNA binding [GO:0003729]; mRNA processing [GO:0006397]; regulation of RNA splicing [GO:0043484]; RNA splicing [GO:0008380] GO:0003729; GO:0005634; GO:0006397; GO:0008380; GO:0043484 TRINITY_DN6571_c0_g1_i1 0 74 0 154 55.4488898 9.248891898 2.063518678 4.482097494 7.39e-06 0.002315106 1 sp P0DKJ9 PRS7A_ORYSJ 75 424 102 2 79 1347 6 426 9.7e-190 664.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN5443_c0_g1_i18 0 57 0 133 45.97613606 8.958786394 2.167693162 4.132866472 3.58e-05 0.005869789 1 sp Q502K3 ANR52_DANRE 28.6 217 140 3 664 1305 147 351 1.7e-15 86.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2394_c1_g1_i3 0 37 0 90 30.67690312 8.370645575 2.445086657 3.423455586 0.000618304 0.038703367 1 sp Q8LC68 NRP2_ARATH 23.9 222 147 5 52 663 9 226 6.2e-18 93.2 NRP2_ARATH reviewed NAP1-related protein 2 (Nucleosome/chromatin assembly factor group A5) (Protein SET homolog 2) NRP2 NFA5 At1g18800 F6A14.10 Arabidopsis thaliana (Mouse-ear cress) 255 double-strand break repair via homologous recombination [GO:0000724]; nucleosome assembly [GO:0006334]; somatic cell DNA recombination [GO:0016444] cytoplasm [GO:0005737]; nucleus [GO:0005634] cytoplasm [GO:0005737]; nucleus [GO:0005634]; double-strand break repair via homologous recombination [GO:0000724]; nucleosome assembly [GO:0006334]; somatic cell DNA recombination [GO:0016444] GO:0000724; GO:0005634; GO:0005737; GO:0006334; GO:0016444 TRINITY_DN2520_c0_g1_i5 0 56 0 65 30.25583797 8.419319857 2.454021819 3.430825183 0.000601748 0.037919042 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2571_c0_g1_i4 0 28 0 169 46.12873029 8.658196389 2.173508012 3.983512525 6.79e-05 0.009039308 1 sp Q07327 ROP_DROME 65.2 598 187 6 143 1885 1 594 2.3e-217 756.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN12521_c0_g1_i1 0 34 0 179 50.05987487 8.829186454 2.125160651 4.154597183 3.26e-05 0.005464973 1 sp Q9FNU2 AB25B_ORYSJ 38.3 627 359 8 429 2297 25 627 4.6e-104 380.6 AB25B_ORYSJ reviewed ABC transporter B family member 25 (ABC transporter ABCB.25) (OsABCB25) (Protein ALS1 homolog) OsABCB25 Os03g0755100 LOC_Os03g54790 OSJNBb0081K01.19 Oryza sativa subsp. japonica (Rice) 641 response to aluminum ion [GO:0010044] integral component of membrane [GO:0016021]; plant-type vacuole [GO:0000325]; vacuolar membrane [GO:0005774] ATPase activity, coupled to transmembrane movement of substances [GO:0042626]; ATP binding [GO:0005524] integral component of membrane [GO:0016021]; plant-type vacuole [GO:0000325]; vacuolar membrane [GO:0005774]; ATP binding [GO:0005524]; ATPase activity, coupled to transmembrane movement of substances [GO:0042626]; response to aluminum ion [GO:0010044] GO:0000325; GO:0005524; GO:0005774; GO:0010044; GO:0016021; GO:0042626 TRINITY_DN6598_c0_g1_i1 71 930 90 1309 593.0074051 3.848787326 0.489235196 7.866946936 3.63e-15 7.74e-11 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN16305_c0_g1_i2 0 46 0 72 29.07891837 8.354927207 2.486364075 3.360299198 0.000778581 0.043986732 1 sp Q55C77 FCL_DICDI 53.8 312 140 3 55 981 10 320 8.1e-101 369 FCL_DICDI reviewed GDP-L-fucose synthase (EC 1.1.1.271) (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) ger DDB_G0270184 Dictyostelium discoideum (Slime mold) 320 'de novo' GDP-L-fucose biosynthetic process [GO:0042351] coenzyme binding [GO:0050662]; GDP-L-fucose synthase activity [GO:0050577]; isomerase activity [GO:0016853] coenzyme binding [GO:0050662]; GDP-L-fucose synthase activity [GO:0050577]; isomerase activity [GO:0016853]; 'de novo' GDP-L-fucose biosynthetic process [GO:0042351] GO:0016853; GO:0042351; GO:0050577; GO:0050662 TRINITY_DN14262_c0_g1_i1 0 35 0 93 30.80489867 8.357539482 2.442246917 3.422069825 0.000621464 0.038703367 1 sp Q3T1L0 A16A1_RAT 42.9 802 432 13 90 2465 17 802 4.1e-164 580.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN682_c0_g1_i1 97 0 118 5 52.53804548 -6.187982475 1.758580674 -3.518736766 0.000433607 0.030279965 3 sp Q3V009 TMED1_MOUSE 35.8 193 121 2 132 710 33 222 1.5e-25 119.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN507_c1_g1_i14 0 66 0 56 30.97853323 8.430413416 2.43582707 3.461006538 0.00053816 0.035486887 1 sp Q5ZIA5 COPB_CHICK 69.4 956 285 4 85 2943 1 951 0 1287.7 COPB_CHICK reviewed Coatomer subunit beta (Beta-coat protein) (Beta-COP) COPB1 COPB RCJMB04_28l17 Gallus gallus (Chicken) 953 ER to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]; intra-Golgi vesicle-mediated transport [GO:0006891]; retrograde vesicle-mediated transport, Golgi to ER [GO:0006890] COPI vesicle coat [GO:0030126]; cytosol [GO:0005829]; Golgi membrane [GO:0000139] structural molecule activity [GO:0005198] COPI vesicle coat [GO:0030126]; cytosol [GO:0005829]; Golgi membrane [GO:0000139]; structural molecule activity [GO:0005198]; ER to Golgi vesicle-mediated transport [GO:0006888]; intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; retrograde vesicle-mediated transport, Golgi to ER [GO:0006890] GO:0000139; GO:0005198; GO:0005829; GO:0006886; GO:0006888; GO:0006890; GO:0006891; GO:0030126 TRINITY_DN8480_c0_g1_i5 0 35 0 96 31.48623518 8.381433748 2.425439019 3.455635736 0.000548997 0.035868345 1 sp Q76LC6 RBM24_DANRE 60.1 148 53 2 206 649 5 146 4.8e-42 176 RBM24_DANRE reviewed RNA-binding protein 24 (RNA-binding motif protein 24) (RNA-binding protein SEB-4) rbm24 Danio rerio (Zebrafish) (Brachydanio rerio) 230 atrial cardiac muscle tissue development [GO:0003228]; cardiovascular system development [GO:0072358]; cell differentiation [GO:0030154]; embryonic neurocranium morphogenesis [GO:0048702]; heart looping [GO:0001947]; mRNA processing [GO:0006397]; regulation of mRNA stability [GO:0043488]; regulation of myotube differentiation [GO:0010830]; regulation of sarcomere organization [GO:0060297]; skeletal muscle tissue development [GO:0007519]; somitogenesis [GO:0001756] cytoplasm [GO:0005737]; nucleus [GO:0005634] mRNA 3'-UTR binding [GO:0003730] cytoplasm [GO:0005737]; nucleus [GO:0005634]; mRNA 3'-UTR binding [GO:0003730]; atrial cardiac muscle tissue development [GO:0003228]; cardiovascular system development [GO:0072358]; cell differentiation [GO:0030154]; embryonic neurocranium morphogenesis [GO:0048702]; heart looping [GO:0001947]; mRNA processing [GO:0006397]; regulation of mRNA stability [GO:0043488]; regulation of myotube differentiation [GO:0010830]; regulation of sarcomere organization [GO:0060297]; skeletal muscle tissue development [GO:0007519]; somitogenesis [GO:0001756] GO:0001756; GO:0001947; GO:0003228; GO:0003730; GO:0005634; GO:0005737; GO:0006397; GO:0007519; GO:0010830; GO:0030154; GO:0043488; GO:0048702; GO:0060297; GO:0072358 TRINITY_DN3377_c0_g1_i6 920 142 1259 63 571.5455077 -3.43588858 0.555014732 -6.190625907 5.99e-10 3.19e-06 3 sp P53634 CATC_HUMAN 50 456 218 4 2481 3821 7 461 1.5e-136 489.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN726_c0_g1_i4 0 136 0 168 75.78202995 9.744323871 1.918867294 5.07816455 3.81e-07 0.000393906 1 sp P18445 RL27A_RAT 62.2 148 55 1 39 479 1 148 3e-48 193 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN9055_c5_g1_i18 2984 1391 2976 676 1977.370737 -1.556858932 0.368819099 -4.221199325 2.43e-05 0.004580339 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN410_c0_g1_i12 0 67 0 106 42.61081225 8.904334601 2.212754298 4.024095494 5.72e-05 0.008067484 1 sp Q6MDI2 PNP_PARUW 41.1 698 373 14 1049 3127 13 677 1.4e-127 459.5 PNP_PARUW reviewed Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase) pnp pc0643 Protochlamydia amoebophila (strain UWE25) 697 mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396] cytoplasm [GO:0005737] 3'-5'-exoribonuclease activity [GO:0000175]; metal ion binding [GO:0046872]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723] cytoplasm [GO:0005737]; 3'-5'-exoribonuclease activity [GO:0000175]; metal ion binding [GO:0046872]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723]; mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396] GO:0000175; GO:0003723; GO:0004654; GO:0005737; GO:0006396; GO:0006402; GO:0046872 TRINITY_DN3768_c0_g1_i5 938 156 1076 149 559.9099558 -2.658751495 0.494544367 -5.37616374 7.61e-08 0.000162063 3 sp A5GFY8 SERA_PIG 48.6 529 259 8 245 1819 4 523 1.8e-123 444.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN3970_c0_g1_i9 0 42 0 109 36.37538676 8.600607138 2.319196201 3.708443095 0.000208538 0.01931148 1 sp P30182 TOP2_ARATH 46.1 1203 570 15 36 3542 32 1190 1.3e-291 1005 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1473_c3_g1_i11 0 45 0 114 38.34095906 8.681298662 2.282963222 3.802644991 0.000143159 0.015245764 1 sp P56941 NPC1_PIG 37.3 1441 660 29 338 4546 25 1259 2.1e-247 857.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2128_c0_g1_i8 0 100 0 226 78.99439857 9.741920686 1.904030421 5.116473234 3.11e-07 0.000390585 1 sp P87262 RL34A_YEAST 47.9 119 61 1 42 395 3 121 1.4e-21 104.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN8294_c0_g1_i1 0 62 0 82 35.77676775 8.661295231 2.328834143 3.719155036 0.00019989 0.018755349 1 sp Q9VE50 GOSR1_DROME 22.9 170 123 3 233 718 58 227 1.1e-06 55.5 GOSR1_DROME reviewed Golgi SNAP receptor complex member 1 (Probable 28 kDa Golgi SNARE protein) Gos28 CG7700 Drosophila melanogaster (Fruit fly) 232 ER to Golgi vesicle-mediated transport [GO:0006888]; Golgi vesicle transport [GO:0048193]; intra-Golgi vesicle-mediated transport [GO:0006891]; protein transport [GO:0015031]; regulation of vesicle targeting, to, from or within Golgi [GO:0048209]; vesicle fusion [GO:0006906]; vesicle-mediated transport [GO:0016192] cis-Golgi network [GO:0005801]; Golgi medial cisterna [GO:0005797]; Golgi membrane [GO:0000139]; Golgi trans cisterna [GO:0000138]; integral component of membrane [GO:0016021]; membrane [GO:0016020]; SNARE complex [GO:0031201] SNAP receptor activity [GO:0005484]; SNARE binding [GO:0000149] cis-Golgi network [GO:0005801]; Golgi medial cisterna [GO:0005797]; Golgi membrane [GO:0000139]; Golgi trans cisterna [GO:0000138]; integral component of membrane [GO:0016021]; membrane [GO:0016020]; SNARE complex [GO:0031201]; SNAP receptor activity [GO:0005484]; SNARE binding [GO:0000149]; ER to Golgi vesicle-mediated transport [GO:0006888]; Golgi vesicle transport [GO:0048193]; intra-Golgi vesicle-mediated transport [GO:0006891]; protein transport [GO:0015031]; regulation of vesicle targeting, to, from or within Golgi [GO:0048209]; vesicle fusion [GO:0006906]; vesicle-mediated transport [GO:0016192] GO:0000138; GO:0000139; GO:0000149; GO:0005484; GO:0005797; GO:0005801; GO:0006888; GO:0006891; GO:0006906; GO:0015031; GO:0016020; GO:0016021; GO:0016192; GO:0031201; GO:0048193; GO:0048209 TRINITY_DN2160_c2_g2_i14 311 0 265 6 141.5115186 -7.024703818 1.236082922 -5.683036059 1.32e-08 3.84e-05 3 sp P20042 IF2B_HUMAN 74 181 45 1 401 943 155 333 2.2e-74 282 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN782_c0_g1_i11 0 48 0 68 28.72381064 8.342762776 2.496202875 3.342181383 0.000831227 0.045479627 1 sp Q9XGL4 RL31_CYAPA 55.5 119 52 1 48 401 1 119 5.8e-31 136 RL31_CYAPA reviewed 60S ribosomal protein L31 RPL31 Cyanophora paradoxa 119 translation [GO:0006412] ribosome [GO:0005840] structural constituent of ribosome [GO:0003735] ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412] GO:0003735; GO:0005840; GO:0006412 TRINITY_DN3819_c1_g1_i24 113 0 95 0 50.64241799 -9.07670263 2.110723508 -4.300280258 1.71e-05 0.003727564 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN117103_c0_g1_i1 0 46 0 75 29.76025488 8.38509747 2.467788523 3.397818489 0.000679255 0.041217795 1 sp P0CQ45 REXO4_CRYNB 44.5 200 105 3 170 757 133 330 2.8e-35 150.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1447_c0_g1_i38 0 37 0 243 65.42506524 9.111468819 1.993060067 4.571597701 4.84e-06 0.00180862 1 sp P33188 TBB1_PARTE 93.6 437 28 0 61 1371 1 437 6.7e-249 861.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN17556_c0_g1_i1 0 31 0 154 43.55205916 8.655747496 2.206022692 3.923689239 8.72e-05 0.010613378 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2362_c0_g1_i5 0 22 0 109 30.84197716 8.170836797 2.446054379 3.340415023 0.000836533 0.045479627 1 sp P57106 MDHC2_ARATH 57.5 332 132 4 139 1122 2 328 2.2e-102 374.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1517_c1_g1_i3 37 0 215 0 56.5916 -8.89991261 2.060839573 -4.318585846 1.57e-05 0.003598946 3 sp Q99LE6 ABCF2_MOUSE 69 567 174 1 387 2087 59 623 1.7e-235 817.4 ABCF2_MOUSE reviewed ATP-binding cassette sub-family F member 2 Abcf2 Mus musculus (Mouse) 628 membrane [GO:0016020]; mitochondrion [GO:0005739] ATPase activity [GO:0016887]; ATP binding [GO:0005524] membrane [GO:0016020]; mitochondrion [GO:0005739]; ATP binding [GO:0005524]; ATPase activity [GO:0016887] GO:0005524; GO:0005739; GO:0016020; GO:0016887 TRINITY_DN13529_c0_g1_i15 0 55 0 58 28.3893823 8.32373568 2.505702015 3.321917623 0.000894011 0.04772315 1 sp Q9FMU6 MPCP3_ARATH 45.3 298 146 6 107 997 77 358 2.5e-59 230.7 MPCP3_ARATH reviewed Mitochondrial phosphate carrier protein 3, mitochondrial (Mitochondrial phosphate transporter 3) (MPT3) (Phosphate transporter 3;1) MPT3 AT5 PHT3;1 At5g14040 MUA22_4 Arabidopsis thaliana (Mouse-ear cress) 375 mitochondrial transport [GO:0006839]; response to salt stress [GO:0009651] cell wall [GO:0005618]; chloroplast [GO:0009507]; integral component of membrane [GO:0016021]; membrane [GO:0016020]; mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]; vacuolar membrane [GO:0005774] phosphate ion transmembrane transporter activity [GO:0015114] cell wall [GO:0005618]; chloroplast [GO:0009507]; integral component of membrane [GO:0016021]; membrane [GO:0016020]; mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]; vacuolar membrane [GO:0005774]; phosphate ion transmembrane transporter activity [GO:0015114]; mitochondrial transport [GO:0006839]; response to salt stress [GO:0009651] GO:0005618; GO:0005739; GO:0005743; GO:0005774; GO:0006839; GO:0009507; GO:0009651; GO:0015114; GO:0016020; GO:0016021 TRINITY_DN2530_c0_g1_i5 0 101 0 172 67.00701183 9.54921628 1.971908308 4.842626931 1.28e-06 0.000842597 1 sp P02640 VILI_CHICK 34 832 475 21 54 2387 15 826 1.6e-121 438.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN565_c1_g1_i2 0 122 0 34 41.47561235 8.540076756 2.234410792 3.82207103 0.000132336 0.014454436 1 sp Q8Q0U0 Y045_METMA 37.5 120 65 3 428 763 206 323 2.2e-10 68.2 Y045_METMA reviewed Putative ankyrin repeat protein MM_0045 MM_0045 Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (Methanosarcina frisia) 360 TRINITY_DN16395_c0_g1_i1 0 70 0 119 46.39328191 9.020201456 2.161282324 4.173541492 3e-05 0.005193164 1 sp Q5A761 CCR4_CANAL 25 376 249 11 635 1735 429 780 3.9e-20 101.3 CCR4_CANAL reviewed Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase) CCR4 CAALFM_C108220WA Ca41C10.13c CaO19.12567 CaO19.5101 Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast) 787 cellular response to starvation [GO:0009267]; filamentous growth [GO:0030447]; filamentous growth of a population of unicellular organisms in response to biotic stimulus [GO:0036180]; filamentous growth of a population of unicellular organisms in response to starvation [GO:0036170]; fungal-type cell wall biogenesis [GO:0009272]; nuclear-transcribed mRNA poly(A) tail shortening [GO:0000289]; pathogenesis [GO:0009405]; phospholipid homeostasis [GO:0055091]; regulation of transcription, DNA-templated [GO:0006355]; transcription, DNA-templated [GO:0006351] CCR4-NOT core complex [GO:0030015]; cytoplasm [GO:0005737]; nucleus [GO:0005634] 3'-5'-exoribonuclease activity [GO:0000175]; metal ion binding [GO:0046872]; poly(A)-specific ribonuclease activity [GO:0004535]; RNA binding [GO:0003723] CCR4-NOT core complex [GO:0030015]; cytoplasm [GO:0005737]; nucleus [GO:0005634]; 3'-5'-exoribonuclease activity [GO:0000175]; metal ion binding [GO:0046872]; poly(A)-specific ribonuclease activity [GO:0004535]; RNA binding [GO:0003723]; cellular response to starvation [GO:0009267]; filamentous growth [GO:0030447]; filamentous growth of a population of unicellular organisms in response to biotic stimulus [GO:0036180]; filamentous growth of a population of unicellular organisms in response to starvation [GO:0036170]; fungal-type cell wall biogenesis [GO:0009272]; nuclear-transcribed mRNA poly(A) tail shortening [GO:0000289]; pathogenesis [GO:0009405]; phospholipid homeostasis [GO:0055091]; regulation of transcription, DNA-templated [GO:0006355]; transcription, DNA-templated [GO:0006351] GO:0000175; GO:0000289; GO:0003723; GO:0004535; GO:0005634; GO:0005737; GO:0006351; GO:0006355; GO:0009267; GO:0009272; GO:0009405; GO:0030015; GO:0030447; GO:0036170; GO:0036180; GO:0046872; GO:0055091 TRINITY_DN679_c6_g1_i2 0 58 0 56 28.76516939 8.336697422 2.494918821 3.341470412 0.000833359 0.045479627 1 sp D3YTS9 PPAT_MOUSE 26.7 378 202 13 17 1042 16 354 1.2e-19 99.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN6524_c0_g1_i16 0 88 0 102 47.51244364 9.070259888 2.146807105 4.22499994 2.39e-05 0.004543929 1 sp Q8SX83 SPEN_DROME 56.5 184 77 1 9725 10267 5376 5559 8.4e-48 196.1 SPEN_DROME reviewed Protein split ends spen CG18497 Drosophila melanogaster (Fruit fly) 5560 axon guidance [GO:0007411]; compound eye development [GO:0048749]; defense response to fungus [GO:0050832]; epidermal growth factor receptor signaling pathway [GO:0007173]; establishment of thoracic bristle planar orientation [GO:0048106]; glial cell fate determination [GO:0007403]; imaginal disc-derived wing vein morphogenesis [GO:0008586]; maintenance of imaginal disc-derived wing hair orientation [GO:0035321]; mRNA splicing, via spliceosome [GO:0000398]; neuroblast fate determination [GO:0007400]; peripheral nervous system development [GO:0007422]; positive regulation of Wnt signaling pathway [GO:0030177]; regulation of transcription, DNA-templated [GO:0006355]; segment specification [GO:0007379]; sleep [GO:0030431]; transcription, DNA-templated [GO:0006351]; wing disc pattern formation [GO:0035222]; Wnt signaling pathway [GO:0016055] nucleus [GO:0005634] nucleic acid binding [GO:0003676]; RNA binding [GO:0003723] nucleus [GO:0005634]; nucleic acid binding [GO:0003676]; RNA binding [GO:0003723]; axon guidance [GO:0007411]; compound eye development [GO:0048749]; defense response to fungus [GO:0050832]; epidermal growth factor receptor signaling pathway [GO:0007173]; establishment of thoracic bristle planar orientation [GO:0048106]; glial cell fate determination [GO:0007403]; imaginal disc-derived wing vein morphogenesis [GO:0008586]; maintenance of imaginal disc-derived wing hair orientation [GO:0035321]; mRNA splicing, via spliceosome [GO:0000398]; neuroblast fate determination [GO:0007400]; peripheral nervous system development [GO:0007422]; positive regulation of Wnt signaling pathway [GO:0030177]; regulation of transcription, DNA-templated [GO:0006355]; segment specification [GO:0007379]; sleep [GO:0030431]; transcription, DNA-templated [GO:0006351]; wing disc pattern formation [GO:0035222]; Wnt signaling pathway [GO:0016055] GO:0000398; GO:0003676; GO:0003723; GO:0005634; GO:0006351; GO:0006355; GO:0007173; GO:0007379; GO:0007400; GO:0007403; GO:0007411; GO:0007422; GO:0008586; GO:0016055; GO:0030177; GO:0030431; GO:0035222; GO:0035321; GO:0048106; GO:0048749; GO:0050832 TRINITY_DN11719_c0_g1_i4 0 37 0 133 40.44272646 8.663817793 2.249837341 3.850864076 0.000117702 0.013264185 1 sp P45974 UBP5_HUMAN 35.8 871 434 23 108 2402 4 855 1.3e-133 478.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN8884_c0_g1_i1 0 48 0 98 35.53717576 8.613110607 2.334598786 3.689332256 0.000224843 0.020005561 1 sp F4IMH3 NOC4_ARATH 25.1 514 292 19 294 1604 57 554 7.2e-21 104 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN993_c0_g1_i16 0 35 0 105 33.53024472 8.448881126 2.378505656 3.552180381 0.000382053 0.027772504 1 sp Q9XHS0 RS12_HORVU 49.6 137 62 1 49 438 1 137 2.4e-30 133.7 RS12_HORVU reviewed 40S ribosomal protein S12 RPS12 Hordeum vulgare (Barley) 143 translation [GO:0006412] ribosome [GO:0005840] structural constituent of ribosome [GO:0003735] ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412] GO:0003735; GO:0005840; GO:0006412 TRINITY_DN10685_c0_g2_i1 0 109 0 212 78.3048625 9.756011354 1.906885502 5.116201967 3.12e-07 0.000390585 1 sp P42791 RL182_ARATH 61.7 193 68 1 54 632 1 187 4.5e-56 219.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1670_c0_g1_i24 0 137 0 127 66.74710143 9.54743935 1.973053406 4.838915825 1.31e-06 0.000842597 1 sp Q6PJP8 DCR1A_HUMAN 46.2 342 181 2 2201 3226 696 1034 2.4e-85 318.9 DCR1A_HUMAN reviewed DNA cross-link repair 1A protein (SNM1 homolog A) (hSNM1) (hSNM1A) DCLRE1A KIAA0086 SNM1 SNM1A Homo sapiens (Human) 1040 cell cycle [GO:0007049]; cell division [GO:0051301]; double-strand break repair via nonhomologous end joining [GO:0006303]; interstrand cross-link repair [GO:0036297]; protection from non-homologous end joining at telomere [GO:0031848] fibrillar center [GO:0001650]; nuclear chromosome, telomeric region [GO:0000784]; nucleoplasm [GO:0005654] 5'-3' exodeoxyribonuclease activity [GO:0035312]; damaged DNA binding [GO:0003684] fibrillar center [GO:0001650]; nuclear chromosome, telomeric region [GO:0000784]; nucleoplasm [GO:0005654]; 5'-3' exodeoxyribonuclease activity [GO:0035312]; damaged DNA binding [GO:0003684]; cell cycle [GO:0007049]; cell division [GO:0051301]; double-strand break repair via nonhomologous end joining [GO:0006303]; interstrand cross-link repair [GO:0036297]; protection from non-homologous end joining at telomere [GO:0031848] GO:0000784; GO:0001650; GO:0003684; GO:0005654; GO:0006303; GO:0007049; GO:0031848; GO:0035312; GO:0036297; GO:0051301 TRINITY_DN793_c0_g1_i1 0 3 0 218 50.34046465 7.362473021 2.085098951 3.530994545 0.000414 0.029122756 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN7332_c0_g1_i4 0 57 0 69 31.44095713 8.475437581 2.42401972 3.496439205 0.000471512 0.032388026 1 sp Q96FW1 OTUB1_HUMAN 37.6 266 150 8 64 843 14 269 5.9e-43 176.4 OTUB1_HUMAN reviewed Ubiquitin thioesterase OTUB1 (EC 3.4.19.12) (Deubiquitinating enzyme OTUB1) (OTU domain-containing ubiquitin aldehyde-binding protein 1) (Otubain-1) (hOTU1) (Ubiquitin-specific-processing protease OTUB1) OTUB1 OTB1 OTU1 HSPC263 Homo sapiens (Human) 271 adaptive immune response [GO:0002250]; cellular response to DNA damage stimulus [GO:0006974]; cellular response to interleukin-1 [GO:0071347]; DNA repair [GO:0006281]; negative regulation of double-strand break repair [GO:2000780]; negative regulation of histone H2A K63-linked ubiquitination [GO:1901315]; protein deubiquitination [GO:0016579]; protein K48-linked deubiquitination [GO:0071108] cytosol [GO:0005829]; extracellular exosome [GO:0070062]; nucleoplasm [GO:0005654]; nucleus [GO:0005634] NEDD8-specific protease activity [GO:0019784]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]; ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625] cytosol [GO:0005829]; extracellular exosome [GO:0070062]; nucleoplasm [GO:0005654]; nucleus [GO:0005634]; NEDD8-specific protease activity [GO:0019784]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]; ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625]; adaptive immune response [GO:0002250]; cellular response to DNA damage stimulus [GO:0006974]; cellular response to interleukin-1 [GO:0071347]; DNA repair [GO:0006281]; negative regulation of double-strand break repair [GO:2000780]; negative regulation of histone H2A K63-linked ubiquitination [GO:1901315]; protein deubiquitination [GO:0016579]; protein K48-linked deubiquitination [GO:0071108] GO:0002250; GO:0004843; GO:0005634; GO:0005654; GO:0005829; GO:0006281; GO:0006974; GO:0016579; GO:0019784; GO:0031625; GO:0043130; GO:0070062; GO:0071108; GO:0071347; GO:1901315; GO:2000780 TRINITY_DN4104_c1_g1_i3 0 44 0 93 33.29493299 8.513984201 2.382037767 3.574244002 0.000351241 0.02615765 1 sp Q5XJQ5 EXOS9_DANRE 37.1 318 183 5 97 999 13 330 7.4e-49 196.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1838_c1_g2_i1 0 62 0 111 42.3630207 8.883695447 2.216710057 4.00760371 6.13e-05 0.008374593 1 sp O94432 YHKF_SCHPO 36.6 216 98 5 465 1112 163 339 4.8e-29 130.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN4645_c1_g1_i6 0 54 0 105 38.78698384 8.746101584 2.274130972 3.845909357 0.000120106 0.013393409 1 sp B2X050 MNR1_CAPAN 27.6 308 167 11 82 864 9 307 1.3e-16 89 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN7447_c0_g1_i1 0 48 0 94 34.62872708 8.582149688 2.353013647 3.647301281 0.000265009 0.021540619 1 sp Q9D9Q0 LRC69_MOUSE 32.2 205 133 6 171 770 23 226 7.4e-14 80.5 LRC69_MOUSE reviewed Leucine-rich repeat-containing protein 69 Lrrc69 Mus musculus (Mouse) 347 TRINITY_DN19953_c0_g1_i1 0 58 0 82 34.67008583 8.613989115 2.35139711 3.663349366 0.000248939 0.020970825 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1745_c0_g1_i2 0 141 0 162 75.80270932 9.743901973 1.918842576 5.078010095 3.81e-07 0.000393906 1 sp Q5E958 RS8_BOVIN 57.8 206 81 2 45 644 1 206 7.7e-63 241.9 RS8_BOVIN reviewed 40S ribosomal protein S8 RPS8 Bos taurus (Bovine) 208 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; translation [GO:0006412] cytosolic small ribosomal subunit [GO:0022627]; intracellular ribonucleoprotein complex [GO:0030529]; membrane [GO:0016020] structural constituent of ribosome [GO:0003735] cytosolic small ribosomal subunit [GO:0022627]; intracellular ribonucleoprotein complex [GO:0030529]; membrane [GO:0016020]; structural constituent of ribosome [GO:0003735]; maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; translation [GO:0006412] GO:0000462; GO:0003735; GO:0006412; GO:0016020; GO:0022627; GO:0030529 TRINITY_DN644_c0_g1_i5 0 82 0 144 55.39113193 9.27173615 2.063509975 4.49318698 7.02e-06 0.002315106 1 sp P98158 LRP2_RAT 27.6 185 110 7 497 1042 2787 2950 1e-06 57.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN8308_c0_g1_i1 0 75 0 44 30.7432215 8.353826768 2.442459019 3.420252583 0.00062563 0.038849262 1 sp Q9P2Q2 FRM4A_HUMAN 44.4 550 261 6 288 1934 15 520 1.5e-110 403.3 FRM4A_HUMAN reviewed FERM domain-containing protein 4A FRMD4A FRMD4 KIAA1294 Homo sapiens (Human) 1039 establishment of epithelial cell polarity [GO:0090162] bicellular tight junction [GO:0005923]; cytoplasm [GO:0005737]; cytoskeleton [GO:0005856] protein binding, bridging [GO:0030674] bicellular tight junction [GO:0005923]; cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; protein binding, bridging [GO:0030674]; establishment of epithelial cell polarity [GO:0090162] GO:0005737; GO:0005856; GO:0005923; GO:0030674; GO:0090162 TRINITY_DN1396_c0_g1_i1 0 94 0 118 52.80626125 9.223312197 2.087863838 4.417583191 9.98e-06 0.002779477 1 sp Q9W5N2 RL38_DROME 58.6 70 29 0 29 238 1 70 1.9e-15 84 RL38_DROME reviewed 60S ribosomal protein L38 RpL38 CG18001 Drosophila melanogaster (Fruit fly) 70 cytoplasmic translation [GO:0002181]; ribonucleoprotein complex assembly [GO:0022618] cytosolic large ribosomal subunit [GO:0022625]; cytosolic ribosome [GO:0022626]; ribosome [GO:0005840] RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735] cytosolic large ribosomal subunit [GO:0022625]; cytosolic ribosome [GO:0022626]; ribosome [GO:0005840]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]; cytoplasmic translation [GO:0002181]; ribonucleoprotein complex assembly [GO:0022618] GO:0002181; GO:0003723; GO:0003735; GO:0005840; GO:0022618; GO:0022625; GO:0022626 TRINITY_DN12600_c0_g1_i13 91 0 89 0 43.50148049 -8.873043801 2.199414911 -4.034274641 5.48e-05 0.007955996 3 sp Q8VHC8 MA2B1_CAVPO 48.1 1023 465 21 275 3307 34 1002 1.7e-252 874.4 MA2B1_CAVPO reviewed Lysosomal alpha-mannosidase (Laman) (EC 3.2.1.24) (Lysosomal acid alpha-mannosidase) (Mannosidase alpha class 2B member 1) (Mannosidase alpha-B) MAN2B1 MANB Cavia porcellus (Guinea pig) 1007 mannose metabolic process [GO:0006013] lysosome [GO:0005764] alpha-mannosidase activity [GO:0004559]; carbohydrate binding [GO:0030246]; metal ion binding [GO:0046872] lysosome [GO:0005764]; alpha-mannosidase activity [GO:0004559]; carbohydrate binding [GO:0030246]; metal ion binding [GO:0046872]; mannose metabolic process [GO:0006013] GO:0004559; GO:0005764; GO:0006013; GO:0030246; GO:0046872 TRINITY_DN246_c0_g3_i1 0 77 0 150 55.37045256 9.257412159 2.064016525 4.4851444 7.29e-06 0.002315106 1 sp P18101 RL40_DROME 90.6 128 12 0 37 420 1 128 2.3e-61 236.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN7794_c3_g1_i3 0 60 0 61 30.45407121 8.422826361 2.449113993 3.439132023 0.000583583 0.037398902 1 sp Q9LD90 CBF5_ARATH 64.5 397 139 2 60 1247 8 403 4.2e-151 536.6 CBF5_ARATH reviewed H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (CBF5 homolog) (Dyskerin) (Nopp-140-associated protein of 57 kDa homolog) (AtNAP57) (Nucleolar protein NAP57 homolog) CBF5 NAP57 At3g57150 F24I3.230 Arabidopsis thaliana (Mouse-ear cress) 565 box H/ACA snoRNA 3'-end processing [GO:0000495]; mRNA pseudouridine synthesis [GO:1990481]; rRNA pseudouridine synthesis [GO:0031118]; snRNA pseudouridine synthesis [GO:0031120] box H/ACA snoRNP complex [GO:0031429]; cytosol [GO:0005829]; nucleolus [GO:0005730]; plasmodesma [GO:0009506] pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723] box H/ACA snoRNP complex [GO:0031429]; cytosol [GO:0005829]; nucleolus [GO:0005730]; plasmodesma [GO:0009506]; pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; box H/ACA snoRNA 3'-end processing [GO:0000495]; mRNA pseudouridine synthesis [GO:1990481]; rRNA pseudouridine synthesis [GO:0031118]; snRNA pseudouridine synthesis [GO:0031120] GO:0000495; GO:0003723; GO:0005730; GO:0005829; GO:0009506; GO:0009982; GO:0031118; GO:0031120; GO:0031429; GO:1990481 TRINITY_DN3356_c0_g1_i12 0 33 0 103 32.52267942 8.394827318 2.401510396 3.495644795 0.000472918 0.032388026 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN287_c0_g1_i14 83 0 58 0 34.6348364 -8.500148179 2.352204436 -3.613694477 0.000301865 0.023465026 3 sp Q9BYW2 SETD2_HUMAN 48.6 370 163 5 210 1289 1476 1828 9.1e-100 367.5 SETD2_HUMAN reviewed Histone-lysine N-methyltransferase SETD2 (EC 2.1.1.43) (HIF-1) (Huntingtin yeast partner B) (Huntingtin-interacting protein 1) (HIP-1) (Huntingtin-interacting protein B) (Lysine N-methyltransferase 3A) (SET domain-containing protein 2) (hSET2) (p231HBP) SETD2 HIF1 HYPB KIAA1732 KMT3A SET2 HSPC069 Homo sapiens (Human) 2564 angiogenesis [GO:0001525]; cell migration involved in vasculogenesis [GO:0035441]; coronary vasculature morphogenesis [GO:0060977]; embryonic cranial skeleton morphogenesis [GO:0048701]; embryonic placenta morphogenesis [GO:0060669]; forebrain development [GO:0030900]; histone H3-K36 dimethylation [GO:0097676]; histone H3-K36 trimethylation [GO:0097198]; mesoderm morphogenesis [GO:0048332]; mismatch repair [GO:0006298]; morphogenesis of a branching structure [GO:0001763]; neural tube closure [GO:0001843]; nucleosome organization [GO:0034728]; pericardium development [GO:0060039]; regulation of mRNA export from nucleus [GO:0010793]; regulation of transcription, DNA-templated [GO:0006355]; stem cell development [GO:0048864]; transcription elongation from RNA polymerase II promoter [GO:0006368] chromosome [GO:0005694]; nucleoplasm [GO:0005654] histone-lysine N-methyltransferase activity [GO:0018024]; histone methyltransferase activity (H3-K36 specific) [GO:0046975] chromosome [GO:0005694]; nucleoplasm [GO:0005654]; histone methyltransferase activity (H3-K36 specific) [GO:0046975]; histone-lysine N-methyltransferase activity [GO:0018024]; angiogenesis [GO:0001525]; cell migration involved in vasculogenesis [GO:0035441]; coronary vasculature morphogenesis [GO:0060977]; embryonic cranial skeleton morphogenesis [GO:0048701]; embryonic placenta morphogenesis [GO:0060669]; forebrain development [GO:0030900]; histone H3-K36 dimethylation [GO:0097676]; histone H3-K36 trimethylation [GO:0097198]; mesoderm morphogenesis [GO:0048332]; mismatch repair [GO:0006298]; morphogenesis of a branching structure [GO:0001763]; neural tube closure [GO:0001843]; nucleosome organization [GO:0034728]; pericardium development [GO:0060039]; regulation of mRNA export from nucleus [GO:0010793]; regulation of transcription, DNA-templated [GO:0006355]; stem cell development [GO:0048864]; transcription elongation from RNA polymerase II promoter [GO:0006368] GO:0001525; GO:0001763; GO:0001843; GO:0005654; GO:0005694; GO:0006298; GO:0006355; GO:0006368; GO:0010793; GO:0018024; GO:0030900; GO:0034728; GO:0035441; GO:0046975; GO:0048332; GO:0048701; GO:0048864; GO:0060039; GO:0060669; GO:0060977; GO:0097198; GO:0097676 TRINITY_DN424_c0_g1_i20 211 0 30 0 62.4950486 -8.741331025 2.016595977 -4.334696252 1.46e-05 0.003532766 2 sp Q3BAI2 YCX91_PHAAO 58.7 63 26 0 2031 1843 1 63 4.1e-11 72 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN156_c1_g1_i7 0 30 0 133 38.5060331 8.524073834 2.284042235 3.732012353 0.000189956 0.018474323 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2990_c0_g1_i7 0 23 0 111 31.57287199 8.213425586 2.427645277 3.383289011 0.000716232 0.042597624 1 sp P56286 IF2A_SCHPO 47.8 276 140 3 65 886 4 277 7.7e-65 249.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN6197_c0_g1_i2 0 21 0 114 31.70086754 8.175062925 2.425829823 3.37000677 0.000751663 0.043176317 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN108250_c0_g1_i1 0 85 0 100 46.22820786 9.031029813 2.162686987 4.175837682 2.97e-05 0.00518319 1 sp Q9AT35 RL23A_DAUCA 55.4 148 64 1 45 482 7 154 5.5e-37 155.6 RL23A_DAUCA reviewed 60S ribosomal protein L23a RPL23A Daucus carota (Wild carrot) 154 translation [GO:0006412] ribosome [GO:0005840] rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735] ribosome [GO:0005840]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412] GO:0003735; GO:0005840; GO:0006412; GO:0019843 TRINITY_DN1095_c0_g1_i4 0 58 0 63 30.35495459 8.421776878 2.451680747 3.435103404 0.000592328 0.037617264 1 sp Q2KIA4 SCD5_BOVIN 47.8 253 129 2 462 1217 79 329 3.9e-68 260.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN18049_c0_g1_i8 0 42 0 74 28.42646079 8.311672393 2.505183247 3.317790187 0.000907326 0.048072485 1 sp Q3UHX9 CI114_MOUSE 48.4 308 135 8 205 1074 71 372 1.7e-68 261.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1988_c1_g1_i42 0 74 0 112 45.91017863 9.01496291 2.167213532 4.159702207 3.19e-05 0.005386666 1 sp P22953 MD37E_ARATH 58.3 551 219 5 532 2160 8 555 1.8e-171 604.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN8979_c0_g1_i3 0 94 0 54 38.27108233 8.664012016 2.283060321 3.794911565 0.000147696 0.015420486 1 sp Q9P2K8 E2AK4_HUMAN 31.1 1718 991 44 396 5282 26 1639 1.7e-169 599.4 E2AK4_HUMAN reviewed eIF-2-alpha kinase GCN2 (EC 2.7.11.1) (Eukaryotic translation initiation factor 2-alpha kinase 4) (GCN2-like protein) EIF2AK4 GCN2 KIAA1338 Homo sapiens (Human) 1649 adaptive immune response [GO:0002250]; cell cycle arrest [GO:0007050]; cellular response to amino acid starvation [GO:0034198]; cellular response to cold [GO:0070417]; cellular response to leucine starvation [GO:1990253]; cellular response to UV [GO:0034644]; defense response to virus [GO:0051607]; DNA damage checkpoint [GO:0000077]; eiF2alpha phosphorylation in response to endoplasmic reticulum stress [GO:0036492]; induction by virus of host autophagy [GO:0039520]; learning [GO:0007612]; long-term memory [GO:0007616]; negative regulation by host of viral genome replication [GO:0044828]; negative regulation of CREB transcription factor activity [GO:0032792]; negative regulation of neuron differentiation [GO:0045665]; negative regulation of translational initiation [GO:0045947]; negative regulation of translational initiation in response to stress [GO:0032057]; neuron projection extension [GO:1990138]; positive regulation of adaptive immune response [GO:0002821]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of long-term synaptic potentiation [GO:1900273]; positive regulation of translational initiation in response to starvation [GO:0071264]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; regulation of eIF2 alpha phosphorylation by amino acid starvation [GO:0060733]; regulation of feeding behavior [GO:0060259]; regulation of translational initiation [GO:0006446]; regulation of translational initiation by eIF2 alpha phosphorylation [GO:0010998]; T cell activation involved in immune response [GO:0002286]; viral translation [GO:0019081] cytosolic ribosome [GO:0022626]; polysome [GO:0005844] ATP binding [GO:0005524]; eukaryotic translation initiation factor 2alpha kinase activity [GO:0004694]; protein serine/threonine kinase activity [GO:0004674]; tRNA binding [GO:0000049] cytosolic ribosome [GO:0022626]; polysome [GO:0005844]; ATP binding [GO:0005524]; eukaryotic translation initiation factor 2alpha kinase activity [GO:0004694]; protein serine/threonine kinase activity [GO:0004674]; tRNA binding [GO:0000049]; adaptive immune response [GO:0002250]; cell cycle arrest [GO:0007050]; cellular response to amino acid starvation [GO:0034198]; cellular response to cold [GO:0070417]; cellular response to leucine starvation [GO:1990253]; cellular response to UV [GO:0034644]; defense response to virus [GO:0051607]; DNA damage checkpoint [GO:0000077]; eiF2alpha phosphorylation in response to endoplasmic reticulum stress [GO:0036492]; induction by virus of host autophagy [GO:0039520]; learning [GO:0007612]; long-term memory [GO:0007616]; negative regulation by host of viral genome replication [GO:0044828]; negative regulation of CREB transcription factor activity [GO:0032792]; negative regulation of neuron differentiation [GO:0045665]; negative regulation of translational initiation [GO:0045947]; negative regulation of translational initiation in response to stress [GO:0032057]; neuron projection extension [GO:1990138]; positive regulation of adaptive immune response [GO:0002821]; positive regulation of defense response to virus by host [GO:0002230]; positive regulation of long-term synaptic potentiation [GO:1900273]; positive regulation of translational initiation in response to starvation [GO:0071264]; protein autophosphorylation [GO:0046777]; protein phosphorylation [GO:0006468]; regulation of eIF2 alpha phosphorylation by amino acid starvation [GO:0060733]; regulation of feeding behavior [GO:0060259]; regulation of translational initiation [GO:0006446]; regulation of translational initiation by eIF2 alpha phosphorylation [GO:0010998]; T cell activation involved in immune response [GO:0002286]; viral translation [GO:0019081] GO:0000049; GO:0000077; GO:0002230; GO:0002250; GO:0002286; GO:0002821; GO:0004674; GO:0004694; GO:0005524; GO:0005844; GO:0006446; GO:0006468; GO:0007050; GO:0007612; GO:0007616; GO:0010998; GO:0019081; GO:0022626; GO:0032057; GO:0032792; GO:0034198; GO:0034644; GO:0036492; GO:0039520; GO:0044828; GO:0045665; GO:0045947; GO:0046777; GO:0051607; GO:0060259; GO:0060733; GO:0070417; GO:0071264; GO:1900273; GO:1990138; GO:1990253 TRINITY_DN14_c0_g1_i16 0 53 0 87 34.42229429 8.593999924 2.35687233 3.646357851 0.000265984 0.021540619 1 sp Q7ZVR8 ESRP2_DANRE 32.9 328 188 10 53 1000 225 532 3.8e-34 147.9 ESRP2_DANRE reviewed Epithelial splicing regulatory protein 2 (RNA-binding motif protein 35B) (RNA-binding protein 35B) esrp2 rbm35b zgc:77254 Danio rerio (Zebrafish) (Brachydanio rerio) 736 mRNA processing [GO:0006397]; regulation of RNA splicing [GO:0043484]; RNA splicing [GO:0008380] nucleus [GO:0005634] mRNA binding [GO:0003729] nucleus [GO:0005634]; mRNA binding [GO:0003729]; mRNA processing [GO:0006397]; regulation of RNA splicing [GO:0043484]; RNA splicing [GO:0008380] GO:0003729; GO:0005634; GO:0006397; GO:0008380; GO:0043484 TRINITY_DN14_c0_g1_i12 0 41 0 260 70.39265406 9.230013767 1.960289405 4.708495461 2.5e-06 0.001236095 1 sp Q7ZVR8 ESRP2_DANRE 32.9 328 188 10 53 1000 225 532 3.3e-34 147.9 ESRP2_DANRE reviewed Epithelial splicing regulatory protein 2 (RNA-binding motif protein 35B) (RNA-binding protein 35B) esrp2 rbm35b zgc:77254 Danio rerio (Zebrafish) (Brachydanio rerio) 736 mRNA processing [GO:0006397]; regulation of RNA splicing [GO:0043484]; RNA splicing [GO:0008380] nucleus [GO:0005634] mRNA binding [GO:0003729] nucleus [GO:0005634]; mRNA binding [GO:0003729]; mRNA processing [GO:0006397]; regulation of RNA splicing [GO:0043484]; RNA splicing [GO:0008380] GO:0003729; GO:0005634; GO:0006397; GO:0008380; GO:0043484 TRINITY_DN5410_c0_g1_i10 0 11 0 160 39.38132259 8.03037206 2.288520397 3.508979894 0.000449829 0.031149919 1 sp F4ILR7 DEXH1_ARATH 32.2 798 494 14 660 3026 216 975 8.7e-112 406.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN779_c0_g1_i22 0 63 0 96 39.23300862 8.788118195 2.265905112 3.878414038 0.00010514 0.012104701 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2216_c0_g1_i4 405 594 0 199 316.9642827 3.956621744 1.17217095 3.375464767 0.000736911 0.042851867 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2295_c0_g1_i16 0 74 0 71 36.59857963 8.68364074 2.31287605 3.754477349 0.000173704 0.017639904 1 sp Q50KB1 SEP2_EMIHU 49 149 71 2 92 526 14 161 3e-36 154.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN37235_c0_g2_i2 7469 4846 8273 2400 5666.922172 -1.142836765 0.327614772 -3.488355422 0.000486002 0.033071398 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN476_c0_g1_i1 0 43 0 109 36.65205724 8.616687195 2.313800084 3.724041354 0.000196059 0.018688981 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1433_c13_g1_i6 0 33 0 101 32.06845508 8.380038465 2.412038683 3.474255419 0.000512273 0.034203466 1 sp Q9UNX4 WDR3_HUMAN 39.2 961 530 16 184 3000 1 929 5.8e-185 649.8 WDR3_HUMAN reviewed WD repeat-containing protein 3 WDR3 Homo sapiens (Human) 943 maturation of SSU-rRNA [GO:0030490]; rRNA processing [GO:0006364] nuclear membrane [GO:0031965]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]; nucleus [GO:0005634]; Pwp2p-containing subcomplex of 90S preribosome [GO:0034388]; small-subunit processome [GO:0032040] RNA binding [GO:0003723]; snoRNA binding [GO:0030515] nuclear membrane [GO:0031965]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]; nucleus [GO:0005634]; Pwp2p-containing subcomplex of 90S preribosome [GO:0034388]; small-subunit processome [GO:0032040]; RNA binding [GO:0003723]; snoRNA binding [GO:0030515]; maturation of SSU-rRNA [GO:0030490]; rRNA processing [GO:0006364] GO:0003723; GO:0005634; GO:0005654; GO:0005730; GO:0006364; GO:0030490; GO:0030515; GO:0031965; GO:0032040; GO:0034388 TRINITY_DN4472_c1_g1_i3 464 28 381 30 220.5303926 -3.797024746 0.740612553 -5.126870629 2.95e-07 0.000390585 3 sp Q5F3J5 PSME3_CHICK 53.3 242 110 3 90 809 14 254 1.9e-71 271.9 PSME3_CHICK reviewed Proteasome activator complex subunit 3 (Activator of multicatalytic protease subunit 3) (Proteasome activator 28 subunit gamma) (PA28g) (PA28gamma) PSME3 RCJMB04_15e19 RCJMB04_5i13 Gallus gallus (Chicken) 254 negative regulation of extrinsic apoptotic signaling pathway [GO:2001237]; positive regulation of endopeptidase activity [GO:0010950]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of proteasomal protein catabolic process [GO:0061136] cytoplasm [GO:0005737]; cytosol [GO:0005829]; membrane [GO:0016020]; nucleoplasm [GO:0005654]; proteasome activator complex [GO:0008537]; proteasome complex [GO:0000502] endopeptidase activator activity [GO:0061133]; identical protein binding [GO:0042802]; MDM2/MDM4 family protein binding [GO:0097371]; p53 binding [GO:0002039] cytoplasm [GO:0005737]; cytosol [GO:0005829]; membrane [GO:0016020]; nucleoplasm [GO:0005654]; proteasome activator complex [GO:0008537]; proteasome complex [GO:0000502]; endopeptidase activator activity [GO:0061133]; identical protein binding [GO:0042802]; MDM2/MDM4 family protein binding [GO:0097371]; p53 binding [GO:0002039]; negative regulation of extrinsic apoptotic signaling pathway [GO:2001237]; positive regulation of endopeptidase activity [GO:0010950]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of proteasomal protein catabolic process [GO:0061136] GO:0000502; GO:0002039; GO:0005654; GO:0005737; GO:0005829; GO:0008537; GO:0010950; GO:0016020; GO:0042802; GO:0061133; GO:0061136; GO:0097371; GO:2000045; GO:2001237 TRINITY_DN647_c0_g1_i9 0 39 0 240 65.29706968 9.137614853 1.993030432 4.58478441 4.54e-06 0.001728471 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN351_c0_g1_i1 0 84 0 126 51.85645382 9.191005045 2.098058999 4.380718106 1.18e-05 0.003110412 1 sp Q6EV23 RS23_PAPDA 80.4 143 28 0 37 465 1 143 2.5e-64 246.5 RS23_PAPDA reviewed 40S ribosomal protein S23 RpS23 Papilio dardanus (African swallowtail butterfly) 143 translation [GO:0006412] small ribosomal subunit [GO:0015935] structural constituent of ribosome [GO:0003735] small ribosomal subunit [GO:0015935]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412] GO:0003735; GO:0006412; GO:0015935 TRINITY_DN8012_c0_g1_i2 0 40 0 84 30.14424154 8.372361129 2.458288471 3.405768374 0.000659781 0.04038127 1 sp Q8NFA0 UBP32_HUMAN 42.1 1739 784 26 109 5070 1 1601 0 1304.7 UBP32_HUMAN reviewed Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.4.19.12) (Deubiquitinating enzyme 32) (Renal carcinoma antigen NY-REN-60) (Ubiquitin thioesterase 32) (Ubiquitin-specific-processing protease 32) USP32 USP10 Homo sapiens (Human) 1604 protein deubiquitination [GO:0016579]; ubiquitin-dependent protein catabolic process [GO:0006511] cytosol [GO:0005829]; Golgi apparatus [GO:0005794]; membrane [GO:0016020] calcium ion binding [GO:0005509]; thiol-dependent ubiquitin-specific protease activity [GO:0004843] cytosol [GO:0005829]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]; calcium ion binding [GO:0005509]; thiol-dependent ubiquitin-specific protease activity [GO:0004843]; protein deubiquitination [GO:0016579]; ubiquitin-dependent protein catabolic process [GO:0006511] GO:0004843; GO:0005509; GO:0005794; GO:0005829; GO:0006511; GO:0016020; GO:0016579 TRINITY_DN75648_c0_g1_i1 8 525 1 135 178.2517227 6.446006268 1.005766367 6.409049338 1.46e-10 1.04e-06 1 sp Q5RFH3 NDKB_PONAB 73.7 57 15 0 92 262 5 61 3.1e-19 95.5 NDKB_PONAB reviewed Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (EC 2.7.4.6) (Histidine protein kinase NDKB) (EC 2.7.13.3) NME2 Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii) 152 CTP biosynthetic process [GO:0006241]; GTP biosynthetic process [GO:0006183]; integrin-mediated signaling pathway [GO:0007229]; positive regulation of transcription from RNA polymerase II promoter [GO:0045944]; UTP biosynthetic process [GO:0006228] cell periphery [GO:0071944]; cytoplasm [GO:0005737]; lamellipodium [GO:0030027]; nucleus [GO:0005634]; ruffle [GO:0001726] ATP binding [GO:0005524]; metal ion binding [GO:0046872]; nucleoside diphosphate kinase activity [GO:0004550]; protein histidine kinase activity [GO:0004673] cell periphery [GO:0071944]; cytoplasm [GO:0005737]; lamellipodium [GO:0030027]; nucleus [GO:0005634]; ruffle [GO:0001726]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]; nucleoside diphosphate kinase activity [GO:0004550]; protein histidine kinase activity [GO:0004673]; CTP biosynthetic process [GO:0006241]; GTP biosynthetic process [GO:0006183]; integrin-mediated signaling pathway [GO:0007229]; positive regulation of transcription from RNA polymerase II promoter [GO:0045944]; UTP biosynthetic process [GO:0006228] GO:0001726; GO:0004550; GO:0004673; GO:0005524; GO:0005634; GO:0005737; GO:0006183; GO:0006228; GO:0006241; GO:0007229; GO:0030027; GO:0045944; GO:0046872; GO:0071944 TRINITY_DN20770_c1_g1_i1 0 6 14 561 132.115915 5.316589595 1.212942657 4.383215946 1.17e-05 0.003110412 1 sp Q9ULD5 ZN777_HUMAN 37 138 85 2 514 924 692 828 3.4e-21 104 ZN777_HUMAN reviewed Zinc finger protein 777 ZNF777 KIAA1285 Homo sapiens (Human) 760 regulation of transcription, DNA-templated [GO:0006355]; transcription, DNA-templated [GO:0006351] nucleus [GO:0005634] DNA binding [GO:0003677]; metal ion binding [GO:0046872] nucleus [GO:0005634]; DNA binding [GO:0003677]; metal ion binding [GO:0046872]; regulation of transcription, DNA-templated [GO:0006355]; transcription, DNA-templated [GO:0006351] GO:0003677; GO:0005634; GO:0006351; GO:0006355; GO:0046872 TRINITY_DN13752_c0_g1_i1 0 33 0 122 36.83781066 8.522386937 2.312656737 3.685106743 0.000228607 0.020037434 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN16442_c0_g1_i11 0 153 0 51 53.91330413 8.984739519 2.08055791 4.318427992 1.57e-05 0.003598946 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN7231_c0_g1_i14 0 16 0 143 36.90376809 8.174982259 2.322180123 3.52039111 0.000430911 0.030190694 1 sp P34120 PSA7_DICDI 59.2 240 96 2 46 762 3 241 1.9e-77 290.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN67_c0_g1_i4 0 21 0 118 32.60931622 8.201303124 2.404795127 3.410395769 0.000648687 0.039816654 1 sp P36627 BYR3_SCHPO 31.4 118 54 5 468 773 25 131 1.2e-11 72.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1545_c0_g1_i24 0 53 0 109 39.41876204 8.760808435 2.263576561 3.870338908 0.000108684 0.012445504 1 sp P53470 ACT1_SCHMA 89.5 304 32 0 71 982 1 304 2.3e-160 566.2 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN76_c0_g1_i20 0 54 0 80 33.10917957 8.545362302 2.38527052 3.582554779 0.00034025 0.025698545 1 sp Q2KDW6 DNAK_RHIEC 69.7 598 181 0 170 1963 4 601 1.6e-236 820.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN98568_c3_g1_i1 19843 7902 15612 6331 12284.16023 -1.253878366 0.251712195 -4.981396973 6.31e-07 0.000584582 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN7794_c3_g1_i4 0 39 0 103 34.1827023 8.507704647 2.363661835 3.599374717 0.000318983 0.024438937 1 sp Q9LD90 CBF5_ARATH 64.5 397 139 2 59 1246 8 403 3.2e-151 536.6 CBF5_ARATH reviewed H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (CBF5 homolog) (Dyskerin) (Nopp-140-associated protein of 57 kDa homolog) (AtNAP57) (Nucleolar protein NAP57 homolog) CBF5 NAP57 At3g57150 F24I3.230 Arabidopsis thaliana (Mouse-ear cress) 565 box H/ACA snoRNA 3'-end processing [GO:0000495]; mRNA pseudouridine synthesis [GO:1990481]; rRNA pseudouridine synthesis [GO:0031118]; snRNA pseudouridine synthesis [GO:0031120] box H/ACA snoRNP complex [GO:0031429]; cytosol [GO:0005829]; nucleolus [GO:0005730]; plasmodesma [GO:0009506] pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723] box H/ACA snoRNP complex [GO:0031429]; cytosol [GO:0005829]; nucleolus [GO:0005730]; plasmodesma [GO:0009506]; pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]; box H/ACA snoRNA 3'-end processing [GO:0000495]; mRNA pseudouridine synthesis [GO:1990481]; rRNA pseudouridine synthesis [GO:0031118]; snRNA pseudouridine synthesis [GO:0031120] GO:0000495; GO:0003723; GO:0005730; GO:0005829; GO:0009506; GO:0009982; GO:0031118; GO:0031120; GO:0031429; GO:1990481 TRINITY_DN10730_c0_g1_i1 0 78 0 171 60.41647862 9.362799187 2.020860142 4.633076278 3.6e-06 0.001504594 1 sp Q9VKK2 WDR59_DROME 34.6 78 42 2 1532 1765 889 957 5.7e-06 54.3 WDR59_DROME reviewed GATOR complex protein WDR59 CG4705 Drosophila melanogaster (Fruit fly) 969 cellular response to amino acid starvation [GO:0034198]; positive regulation of TOR signaling [GO:0032008] GATOR2 complex [GO:0061700]; Seh1-associated complex [GO:0035859] GATOR2 complex [GO:0061700]; Seh1-associated complex [GO:0035859]; cellular response to amino acid starvation [GO:0034198]; positive regulation of TOR signaling [GO:0032008] GO:0032008; GO:0034198; GO:0035859; GO:0061700 TRINITY_DN2924_c0_g1_i2 0 27 0 142 39.7200312 8.504057084 2.265234758 3.754161485 0.000173923 0.017639904 1 sp O00782 TCPG_OXYGR 66.4 530 174 4 97 1677 9 537 1.3e-194 681 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN4232_c0_g1_i14 0 106 0 181 70.43437377 9.620744049 1.950083693 4.933503153 8.08e-07 0.000666394 1 sp P0DJ52 RL8_TETTS 72.8 136 37 0 7 414 117 252 1.1e-53 210.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN13049_c0_g1_i10 0 35 0 85 28.98800131 8.289873453 2.490290039 3.328878695 0.000871964 0.047136943 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN3059_c10_g1_i2 2385 1076 1974 401 1450.874261 -1.659691002 0.413104742 -4.017603365 5.88e-05 0.00818453 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN5835_c0_g1_i10 51 0 75 0 29.84547215 -8.334897392 2.465152309 -3.381088203 0.000721994 0.042597624 3 sp Q5R814 PRP4B_PONAB 74.1 348 90 0 223 1266 660 1007 3e-156 553.1 PRP4B_PONAB reviewed Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1) (PRP4 pre-mRNA-processing factor 4 homolog) PRPF4B Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii) 1007 mRNA processing [GO:0006397]; RNA splicing [GO:0008380] spliceosomal complex [GO:0005681] ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674] spliceosomal complex [GO:0005681]; ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]; mRNA processing [GO:0006397]; RNA splicing [GO:0008380] GO:0004674; GO:0005524; GO:0005681; GO:0006397; GO:0008380 TRINITY_DN2860_c0_g1_i2 0 37 0 178 50.66277414 8.881407822 2.117512868 4.19426392 2.74e-05 0.005026547 1 sp P85200 PRS6B_HELAN 79.2 379 79 0 35 1171 35 413 9.2e-174 611.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN993_c0_g2_i1 0 46 0 112 38.16340519 8.683173703 2.285909479 3.798564109 0.000145537 0.01532707 1 sp Q9XHS0 RS12_HORVU 49.6 137 62 1 77 466 1 137 4.8e-31 136 RS12_HORVU reviewed 40S ribosomal protein S12 RPS12 Hordeum vulgare (Barley) 143 translation [GO:0006412] ribosome [GO:0005840] structural constituent of ribosome [GO:0003735] ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412] GO:0003735; GO:0005840; GO:0006412 TRINITY_DN10621_c0_g1_i1 0 28 0 116 34.09178524 8.375387134 2.368692289 3.535869633 0.000406435 0.028952052 1 sp Q3TCH7 CUL4A_MOUSE 32.5 653 401 15 432 2345 132 759 4e-84 314.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN108273_c0_g1_i1 0 52 0 86 33.91851164 8.572108715 2.367642285 3.620525267 0.000294006 0.023107099 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2782_c0_g1_i5 0 69 0 51 30.67298382 8.396303812 2.443742792 3.435837781 0.000590725 0.037617264 1 sp Q58424 SERA_METJA 34.5 284 171 3 170 976 31 314 1.5e-37 159.1 SERA_METJA reviewed D-3-phosphoglycerate dehydrogenase (PGDH) (EC 1.1.1.95) serA MJ1018 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) 524 L-serine biosynthetic process [GO:0006564] NAD binding [GO:0051287]; phosphoglycerate dehydrogenase activity [GO:0004617] NAD binding [GO:0051287]; phosphoglycerate dehydrogenase activity [GO:0004617]; L-serine biosynthetic process [GO:0006564] GO:0004617; GO:0006564; GO:0051287 TRINITY_DN6357_c0_g1_i1 0 56 0 74 32.29984751 8.513920047 2.403673775 3.542044738 0.000397038 0.028569308 1 sp Q54SN4 RPAC1_DICDI 42.1 323 172 7 45 971 21 342 1.7e-68 261.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1901_c0_g1_i22 0 43 0 84 30.97425298 8.422271868 2.43670769 3.456414531 0.000547413 0.035868345 1 sp Q71G51 TBA_NEOCA 91.6 453 38 0 151 1509 1 453 2.2e-250 865.9 TBA_NEOCA reviewed Tubulin alpha chain (Alpha-tubulin) TUBA Neospora caninum (Coccidian parasite) 453 microtubule-based process [GO:0007017] cytoplasm [GO:0005737]; microtubule [GO:0005874] GTPase activity [GO:0003924]; GTP binding [GO:0005525]; structural constituent of cytoskeleton [GO:0005200] cytoplasm [GO:0005737]; microtubule [GO:0005874]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; structural constituent of cytoskeleton [GO:0005200]; microtubule-based process [GO:0007017] GO:0003924; GO:0005200; GO:0005525; GO:0005737; GO:0005874; GO:0007017 TRINITY_DN7130_c0_g1_i1 0 25 0 197 51.65785962 8.698148187 2.113356648 4.115797585 3.86e-05 0.006225808 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN4738_c0_g1_i2 0 32 0 140 40.64915925 8.605346595 2.248230197 3.827609203 0.000129394 0.014205992 1 sp O04035 AT74H_ARATH 32.1 237 129 8 193 879 3 215 1.8e-20 102.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN10072_c0_g1_i2 0 56 0 62 29.57450146 8.384996387 2.472417377 3.391416217 0.000695324 0.041835339 1 sp Q8K224 NAT10_MOUSE 50.5 947 428 10 130 2856 3 946 2.3e-260 900.2 NAT10_MOUSE reviewed RNA cytidine acetyltransferase (EC 2.3.1.-) (18S rRNA cytosine acetyltransferase) (N-acetyltransferase 10) Nat10 Kiaa1709 Mus musculus (Mouse) 1024 negative regulation of telomere maintenance via telomerase [GO:0032211]; rRNA acetylation involved in maturation of SSU-rRNA [GO:1904812]; tRNA acetylation [GO:0051391]; tRNA wobble cytosine modification [GO:0002101] 90S preribosome [GO:0030686]; membrane [GO:0016020]; midbody [GO:0030496]; nuclear chromosome, telomeric region [GO:0000784]; nucleolus [GO:0005730]; telomerase holoenzyme complex [GO:0005697] ATP binding [GO:0005524]; DNA polymerase binding [GO:0070182]; N-acetyltransferase activity [GO:0008080]; RNA binding [GO:0003723]; rRNA cytidine N-acetyltransferase activity [GO:1990883]; tRNA binding [GO:0000049]; tRNA N-acetyltransferase activity [GO:0051392] 90S preribosome [GO:0030686]; membrane [GO:0016020]; midbody [GO:0030496]; nuclear chromosome, telomeric region [GO:0000784]; nucleolus [GO:0005730]; telomerase holoenzyme complex [GO:0005697]; ATP binding [GO:0005524]; DNA polymerase binding [GO:0070182]; N-acetyltransferase activity [GO:0008080]; RNA binding [GO:0003723]; rRNA cytidine N-acetyltransferase activity [GO:1990883]; tRNA binding [GO:0000049]; tRNA N-acetyltransferase activity [GO:0051392]; negative regulation of telomere maintenance via telomerase [GO:0032211]; rRNA acetylation involved in maturation of SSU-rRNA [GO:1904812]; tRNA acetylation [GO:0051391]; tRNA wobble cytosine modification [GO:0002101] GO:0000049; GO:0000784; GO:0002101; GO:0003723; GO:0005524; GO:0005697; GO:0005730; GO:0008080; GO:0016020; GO:0030496; GO:0030686; GO:0032211; GO:0051391; GO:0051392; GO:0070182; GO:1904812; GO:1990883 TRINITY_DN16288_c0_g1_i16 0 34 0 154 44.3820706 8.717022518 2.193512084 3.974002506 7.07e-05 0.009178677 1 sp Q5ZDJ6 C3H8_ORYSJ 31.1 367 202 8 156 1163 102 448 4.8e-47 191 C3H8_ORYSJ reviewed Zinc finger CCCH domain-containing protein 8 (OsC3H8) Os01g0616400 LOC_Os01g42970 P0686E09.13-1 P0686E09.13-2 Oryza sativa subsp. japonica (Rice) 462 3'-UTR-mediated mRNA destabilization [GO:0061158] cytosol [GO:0005829]; nucleus [GO:0005634] DNA binding [GO:0003677]; metal ion binding [GO:0046872]; mRNA 3'-UTR binding [GO:0003730] cytosol [GO:0005829]; nucleus [GO:0005634]; DNA binding [GO:0003677]; metal ion binding [GO:0046872]; mRNA 3'-UTR binding [GO:0003730]; 3'-UTR-mediated mRNA destabilization [GO:0061158] GO:0003677; GO:0003730; GO:0005634; GO:0005829; GO:0046872; GO:0061158 TRINITY_DN6864_c0_g1_i8 0 83 0 48 33.86503403 8.489629835 2.369171953 3.583374278 0.000339184 0.025698545 1 sp P43510 CPR6_CAEEL 39.3 275 149 7 155 952 90 355 9.8e-50 199.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN379_c0_g1_i4 0 112 0 87 50.7458526 9.130025531 2.109789388 4.327458268 1.51e-05 0.00356971 1 sp O01504 RLA2_CAEEL 55.4 65 29 0 37 231 1 65 6e-13 75.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN410_c0_g1_i9 0 24 0 110 31.62243029 8.234175123 2.425922269 3.394245243 0.00068818 0.041640776 1 sp Q6MDI2 PNP_PARUW 41 697 375 13 1049 3127 13 677 9.2e-128 459.9 PNP_PARUW reviewed Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase) pnp pc0643 Protochlamydia amoebophila (strain UWE25) 697 mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396] cytoplasm [GO:0005737] 3'-5'-exoribonuclease activity [GO:0000175]; metal ion binding [GO:0046872]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723] cytoplasm [GO:0005737]; 3'-5'-exoribonuclease activity [GO:0000175]; metal ion binding [GO:0046872]; polyribonucleotide nucleotidyltransferase activity [GO:0004654]; RNA binding [GO:0003723]; mRNA catabolic process [GO:0006402]; RNA processing [GO:0006396] GO:0000175; GO:0003723; GO:0004654; GO:0005737; GO:0006396; GO:0006402; GO:0046872 TRINITY_DN1396_c0_g1_i5 0 65 0 125 46.37260253 9.004384817 2.1618936 4.165045318 3.11e-05 0.005304145 1 sp O61570 RL38_OSTOS 64.3 70 25 0 41 250 1 70 2.2e-17 90.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1961_c0_g1_i22 0 44 0 109 36.92872772 8.632425357 2.308476963 3.739446178 0.000184426 0.018101807 1 sp P0CS09 TRM61_CRYNB 47.2 235 119 3 68 766 14 245 5.6e-55 216.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN21885_c0_g1_i1 0 70 0 134 49.79996447 9.107536348 2.120960296 4.29406263 1.75e-05 0.003762233 1 sp P0CM25 GET3_CRYNB 54.8 321 142 2 93 1052 5 323 1.5e-94 347.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN8437_c0_g1_i1 0 50 0 101 36.77185324 8.66380815 2.310591674 3.74960589 0.000177113 0.017793978 1 sp Q8BW49 TTC12_MOUSE 38.1 118 71 2 814 1161 105 222 1.4e-12 75.9 TTC12_MOUSE reviewed Tetratricopeptide repeat protein 12 (TPR repeat protein 12) Ttc12 Mus musculus (Mouse) 704 centrosome [GO:0005813] centrosome [GO:0005813] GO:0005813 TRINITY_DN9183_c0_g1_i1 0 76 0 201 66.67650278 9.463532411 1.97587995 4.789528033 1.67e-06 0.001003061 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1736_c0_g1_i14 0 45 0 97 34.48005215 8.560868302 2.356457368 3.632940031 0.00028021 0.02249569 1 sp Q8TDY2 RBCC1_HUMAN 38 92 50 2 282 545 1504 1592 3.4e-09 66.2 RBCC1_HUMAN reviewed RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200) RB1CC1 KIAA0203 RBICC Homo sapiens (Human) 1594 autophagosome assembly [GO:0000045]; autophagy [GO:0006914]; cell cycle [GO:0007049]; glycophagy [GO:0061723]; heart development [GO:0007507]; liver development [GO:0001889]; macroautophagy [GO:0016236]; mitophagy [GO:0000422]; negative regulation of extrinsic apoptotic signaling pathway [GO:2001237]; pexophagy [GO:0030242]; positive regulation of cell size [GO:0045793]; positive regulation of JNK cascade [GO:0046330]; positive regulation of protein phosphorylation [GO:0001934]; regulation of macroautophagy [GO:0016241]; regulation of transcription, DNA-templated [GO:0006355]; reticulophagy [GO:0061709]; transcription, DNA-templated [GO:0006351] ATG1/ULK1 kinase complex [GO:1990316]; cytosol [GO:0005829]; endoplasmic reticulum membrane [GO:0005789]; nuclear membrane [GO:0031965]; pre-autophagosomal structure membrane [GO:0034045] protein complex scaffold [GO:0032947]; protein kinase binding [GO:0019901] ATG1/ULK1 kinase complex [GO:1990316]; cytosol [GO:0005829]; endoplasmic reticulum membrane [GO:0005789]; nuclear membrane [GO:0031965]; pre-autophagosomal structure membrane [GO:0034045]; protein complex scaffold [GO:0032947]; protein kinase binding [GO:0019901]; autophagosome assembly [GO:0000045]; autophagy [GO:0006914]; cell cycle [GO:0007049]; glycophagy [GO:0061723]; heart development [GO:0007507]; liver development [GO:0001889]; macroautophagy [GO:0016236]; mitophagy [GO:0000422]; negative regulation of extrinsic apoptotic signaling pathway [GO:2001237]; pexophagy [GO:0030242]; positive regulation of cell size [GO:0045793]; positive regulation of JNK cascade [GO:0046330]; positive regulation of protein phosphorylation [GO:0001934]; regulation of macroautophagy [GO:0016241]; regulation of transcription, DNA-templated [GO:0006355]; reticulophagy [GO:0061709]; transcription, DNA-templated [GO:0006351] GO:0000045; GO:0000422; GO:0001889; GO:0001934; GO:0005789; GO:0005829; GO:0006351; GO:0006355; GO:0006914; GO:0007049; GO:0007507; GO:0016236; GO:0016241; GO:0019901; GO:0030242; GO:0031965; GO:0032947; GO:0034045; GO:0045793; GO:0046330; GO:0061709; GO:0061723; GO:1990316; GO:2001237 TRINITY_DN13466_c0_g1_i1 0 65 0 135 48.64372424 9.061163445 2.134484237 4.245130175 2.18e-05 0.004268917 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN4988_c0_g1_i14 0 131 0 39 45.10120753 8.686009826 2.181964049 3.980821696 6.87e-05 0.009044179 1 sp Q96N67 DOCK7_HUMAN 51.7 2155 902 38 23 6217 4 2109 0 2005.3 DOCK7_HUMAN reviewed Dedicator of cytokinesis protein 7 DOCK7 KIAA1771 Homo sapiens (Human) 2140 activation of GTPase activity [GO:0090630]; axonogenesis [GO:0007409]; establishment of neuroblast polarity [GO:0045200]; interkinetic nuclear migration [GO:0022027]; microtubule cytoskeleton organization [GO:0000226]; neuron projection development [GO:0031175]; positive regulation of peptidyl-serine phosphorylation [GO:0033138]; positive regulation of vascular associated smooth muscle cell migration [GO:1904754]; regulation of neurogenesis [GO:0050767]; small GTPase mediated signal transduction [GO:0007264] axon [GO:0030424]; basal part of cell [GO:0045178]; focal adhesion [GO:0005925]; growth cone [GO:0030426]; intracellular [GO:0005622]; neuron projection [GO:0043005] guanyl-nucleotide exchange factor activity [GO:0005085]; Rac GTPase binding [GO:0048365] axon [GO:0030424]; basal part of cell [GO:0045178]; focal adhesion [GO:0005925]; growth cone [GO:0030426]; intracellular [GO:0005622]; neuron projection [GO:0043005]; guanyl-nucleotide exchange factor activity [GO:0005085]; Rac GTPase binding [GO:0048365]; activation of GTPase activity [GO:0090630]; axonogenesis [GO:0007409]; establishment of neuroblast polarity [GO:0045200]; interkinetic nuclear migration [GO:0022027]; microtubule cytoskeleton organization [GO:0000226]; neuron projection development [GO:0031175]; positive regulation of peptidyl-serine phosphorylation [GO:0033138]; positive regulation of vascular associated smooth muscle cell migration [GO:1904754]; regulation of neurogenesis [GO:0050767]; small GTPase mediated signal transduction [GO:0007264] GO:0000226; GO:0005085; GO:0005622; GO:0005925; GO:0007264; GO:0007409; GO:0022027; GO:0030424; GO:0030426; GO:0031175; GO:0033138; GO:0043005; GO:0045178; GO:0045200; GO:0048365; GO:0050767; GO:0090630; GO:1904754 TRINITY_DN493_c0_g1_i11 0 47 0 72 29.35558885 8.370025877 2.478660091 3.376834891 0.000733251 0.042851867 1 sp P35684 RL3_ORYSJ 68.9 389 117 3 24 1181 1 388 7.1e-157 555.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN11234_c0_g1_i2 0 59 0 54 28.58761553 8.322931465 2.500014707 3.329153002 0.000871105 0.047136943 1 sp Q8VYF1 RL152_ARATH 66.2 204 69 0 42 653 1 204 4.9e-72 272.7 RL152_ARATH reviewed 60S ribosomal protein L15-2 RPL15B At4g17390 dl4730c FCAALL.32 Arabidopsis thaliana (Mouse-ear cress) 204 cytoplasmic translation [GO:0002181]; mature ribosome assembly [GO:0042256] cytosolic large ribosomal subunit [GO:0022625]; membrane [GO:0016020]; nucleolus [GO:0005730] mRNA binding [GO:0003729]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735] cytosolic large ribosomal subunit [GO:0022625]; membrane [GO:0016020]; nucleolus [GO:0005730]; mRNA binding [GO:0003729]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]; cytoplasmic translation [GO:0002181]; mature ribosome assembly [GO:0042256] GO:0002181; GO:0003723; GO:0003729; GO:0003735; GO:0005730; GO:0016020; GO:0022625; GO:0042256 TRINITY_DN12337_c0_g1_i1 0 32 0 89 29.06643855 8.263882219 2.488753116 3.320490958 0.000898593 0.047847815 1 sp Q9CAN5 PPR98_ARATH 25.6 429 277 13 288 1496 76 488 2.8e-23 112.1 PPR98_ARATH reviewed Pentatricopeptide repeat-containing protein At1g63080, mitochondrial At1g63080 F16M19.17 Arabidopsis thaliana (Mouse-ear cress) 614 mitochondrial mRNA modification [GO:0080156]; mRNA processing [GO:0006397] mitochondrion [GO:0005739] endonuclease activity [GO:0004519]; RNA binding [GO:0003723] mitochondrion [GO:0005739]; endonuclease activity [GO:0004519]; RNA binding [GO:0003723]; mitochondrial mRNA modification [GO:0080156]; mRNA processing [GO:0006397] GO:0003723; GO:0004519; GO:0005739; GO:0006397; GO:0080156 TRINITY_DN6978_c0_g1_i10 0 47 0 77 30.4911497 8.419613007 2.448553147 3.438607415 0.000584715 0.037398902 1 sp P43508 CPR4_CAEEL 34.3 289 149 11 140 943 67 335 7.8e-37 158.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2992_c0_g1_i9 0 61 0 57 29.822293 8.38591127 2.465765459 3.400936305 0.000671555 0.040866984 1 sp Q43292 RL372_ARATH 67.4 89 29 0 59 325 1 89 1.7e-28 127.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN29419_c0_g1_i6 0 102 0 150 62.28721456 9.45630939 2.005122588 4.71607544 2.4e-06 0.001223944 1 sp Q8TE73 DYH5_HUMAN 65.4 283 98 0 1569 2417 1372 1654 7e-108 393.3 DYH5_HUMAN reviewed Dynein heavy chain 5, axonemal (Axonemal beta dynein heavy chain 5) (Ciliary dynein heavy chain 5) DNAH5 DNAHC5 HL1 KIAA1603 Homo sapiens (Human) 4624 cilium assembly [GO:0060271]; cilium movement [GO:0003341]; determination of left/right symmetry [GO:0007368]; flagellated sperm motility [GO:0030317]; heart development [GO:0007507]; lateral ventricle development [GO:0021670]; outer dynein arm assembly [GO:0036158] axoneme [GO:0005930]; cytoplasm [GO:0005737]; microtubule [GO:0005874]; outer dynein arm [GO:0036157] ATP binding [GO:0005524]; ATP-dependent microtubule motor activity, minus-end-directed [GO:0008569]; dynein intermediate chain binding [GO:0045505]; dynein light chain binding [GO:0045503]; dynein light intermediate chain binding [GO:0051959]; microtubule motor activity [GO:0003777] axoneme [GO:0005930]; cytoplasm [GO:0005737]; microtubule [GO:0005874]; outer dynein arm [GO:0036157]; ATP binding [GO:0005524]; ATP-dependent microtubule motor activity, minus-end-directed [GO:0008569]; dynein intermediate chain binding [GO:0045505]; dynein light chain binding [GO:0045503]; dynein light intermediate chain binding [GO:0051959]; microtubule motor activity [GO:0003777]; cilium assembly [GO:0060271]; cilium movement [GO:0003341]; determination of left/right symmetry [GO:0007368]; flagellated sperm motility [GO:0030317]; heart development [GO:0007507]; lateral ventricle development [GO:0021670]; outer dynein arm assembly [GO:0036158] GO:0003341; GO:0003777; GO:0005524; GO:0005737; GO:0005874; GO:0005930; GO:0007368; GO:0007507; GO:0008569; GO:0021670; GO:0030317; GO:0036157; GO:0036158; GO:0045503; GO:0045505; GO:0051959; GO:0060271 TRINITY_DN5809_c0_g1_i74 0 30 0 154 43.27538868 8.634102488 2.210319562 3.906268865 9.37e-05 0.011029848 1 sp C0HLB2 VKT_PSEPC 48.3 58 30 0 244 417 7 64 2e-13 77.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN108947_c0_g1_i1 0 51 0 91 34.77740201 8.600300931 2.34965223 3.660244193 0.000251975 0.020989914 1 sp Q18409 RSP6_CAEEL 39.5 86 45 3 125 382 4 82 8.8e-10 65.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN11234_c0_g1_i6 0 25 0 149 40.75647543 8.490021457 2.249755097 3.773753627 0.00016081 0.016546295 1 sp Q8VYF1 RL152_ARATH 66.2 204 69 0 42 653 1 204 4.8e-72 272.7 RL152_ARATH reviewed 60S ribosomal protein L15-2 RPL15B At4g17390 dl4730c FCAALL.32 Arabidopsis thaliana (Mouse-ear cress) 204 cytoplasmic translation [GO:0002181]; mature ribosome assembly [GO:0042256] cytosolic large ribosomal subunit [GO:0022625]; membrane [GO:0016020]; nucleolus [GO:0005730] mRNA binding [GO:0003729]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735] cytosolic large ribosomal subunit [GO:0022625]; membrane [GO:0016020]; nucleolus [GO:0005730]; mRNA binding [GO:0003729]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]; cytoplasmic translation [GO:0002181]; mature ribosome assembly [GO:0042256] GO:0002181; GO:0003723; GO:0003729; GO:0003735; GO:0005730; GO:0016020; GO:0022625; GO:0042256 TRINITY_DN21714_c0_g1_i1 0 39 0 79 28.7320102 8.309079831 2.496808383 3.32788046 0.000875094 0.047186402 1 sp P98081 DAB_DROME 77.6 147 32 1 239 676 38 184 1.5e-60 237.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2601_c0_g1_i1 0 40 0 120 38.32027968 8.639371037 2.284249482 3.782148625 0.00015548 0.016154042 1 sp Q9H2K2 TNKS2_HUMAN 39 123 73 2 71 436 59 180 4.9e-12 74.7 TNKS2_HUMAN reviewed Tankyrase-2 (TANK2) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 6) (ARTD6) (Poly [ADP-ribose] polymerase 5B) (TNKS-2) (TRF1-interacting ankyrin-related ADP-ribose polymerase 2) (Tankyrase II) (Tankyrase-like protein) (Tankyrase-related protein) TNKS2 PARP5B TANK2 TNKL Homo sapiens (Human) 1166 multicellular organism growth [GO:0035264]; negative regulation of telomere maintenance via telomere lengthening [GO:1904357]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of telomere capping [GO:1904355]; positive regulation of telomere maintenance via telomerase [GO:0032212]; protein ADP-ribosylation [GO:0006471]; protein auto-ADP-ribosylation [GO:0070213]; protein deubiquitination [GO:0016579]; protein localization to chromosome, telomeric region [GO:0070198]; protein polyubiquitination [GO:0000209]; regulation of multicellular organism growth [GO:0040014]; Wnt signaling pathway [GO:0016055] cytoplasm [GO:0005737]; cytosol [GO:0005829]; Golgi membrane [GO:0000139]; nuclear chromosome, telomeric region [GO:0000784]; nuclear envelope [GO:0005635]; nucleus [GO:0005634]; pericentriolar material [GO:0000242]; perinuclear region of cytoplasm [GO:0048471] enzyme binding [GO:0019899]; metal ion binding [GO:0046872]; NAD+ ADP-ribosyltransferase activity [GO:0003950] cytoplasm [GO:0005737]; cytosol [GO:0005829]; Golgi membrane [GO:0000139]; nuclear chromosome, telomeric region [GO:0000784]; nuclear envelope [GO:0005635]; nucleus [GO:0005634]; pericentriolar material [GO:0000242]; perinuclear region of cytoplasm [GO:0048471]; enzyme binding [GO:0019899]; metal ion binding [GO:0046872]; NAD+ ADP-ribosyltransferase activity [GO:0003950]; multicellular organism growth [GO:0035264]; negative regulation of telomere maintenance via telomere lengthening [GO:1904357]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of telomere capping [GO:1904355]; positive regulation of telomere maintenance via telomerase [GO:0032212]; protein ADP-ribosylation [GO:0006471]; protein auto-ADP-ribosylation [GO:0070213]; protein deubiquitination [GO:0016579]; protein localization to chromosome, telomeric region [GO:0070198]; protein polyubiquitination [GO:0000209]; regulation of multicellular organism growth [GO:0040014]; Wnt signaling pathway [GO:0016055] GO:0000139; GO:0000209; GO:0000242; GO:0000784; GO:0003950; GO:0005634; GO:0005635; GO:0005737; GO:0005829; GO:0006471; GO:0016055; GO:0016579; GO:0019899; GO:0032212; GO:0035264; GO:0040014; GO:0046872; GO:0048471; GO:0070198; GO:0070213; GO:0090263; GO:1904355; GO:1904357 TRINITY_DN27659_c0_g1_i1 0 43 0 106 35.97072073 8.595834421 2.326796671 3.694278288 0.000220512 0.019904877 1 sp P27484 GRP2_NICSY 56.6 76 32 1 72 299 8 82 3.4e-15 83.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1678_c0_g1_i13 0 66 0 114 44.15103913 8.947231094 2.191015561 4.083599977 4.43e-05 0.006843977 1 sp Q3T0U2 RL14_BOVIN 35.4 127 82 0 36 416 2 128 3e-19 97.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN6216_c0_g1_i23 0 62 0 164 54.39996575 9.172077983 2.074540996 4.421256557 9.81e-06 0.002779477 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN105895_c0_g1_i1 0 56 0 109 40.24877348 8.799114112 2.249717654 3.911208189 9.18e-05 0.010866699 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN14959_c1_g1_i32 0 202 23 99 83.37562609 5.159240047 1.509524297 3.417791986 0.000631313 0.039088208 1 sp P51610 HCFC1_HUMAN 73.6 402 101 3 64 1257 8 408 9.9e-189 662.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN14959_c1_g1_i32 0 202 23 99 83.37562609 5.159240047 1.509524297 3.417791986 0.000631313 0.039088208 1 sp P51610 HCFC1_HUMAN 55.4 240 96 3 3130 3849 1807 2035 8.1e-66 254.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN12473_c0_g1_i10 0 66 0 109 43.01547828 8.914239733 2.20695366 4.039160357 5.36e-05 0.007879585 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN3485_c0_g1_i11 0 40 0 114 36.95760666 8.60095501 2.308659945 3.725518359 0.000194914 0.018688981 1 sp O94432 YHKF_SCHPO 33.5 209 111 5 1106 1702 163 353 1.6e-25 119.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1418_c0_g1_i1 0 105 0 60 42.67713063 8.819504725 2.212255457 3.986657461 6.7e-05 0.008989904 1 sp Q9VCP0 ELOA1_DROME 46 239 118 5 1278 1970 408 643 1.8e-42 176.8 ELOA1_DROME reviewed Transcription elongation factor B polypeptide 3 (Elongin-A) (RNA polymerase II transcription factor SIII subunit A) (dEloA) EloA CG6755 Drosophila melanogaster (Fruit fly) 643 imaginal disc-derived wing vein specification [GO:0007474]; positive regulation of transcription elongation from RNA polymerase II promoter [GO:0032968]; transcription elongation from RNA polymerase II promoter [GO:0006368] elongin complex [GO:0070449]; integral component of membrane [GO:0016021]; nucleus [GO:0005634]; transcription elongation factor complex [GO:0008023] elongin complex [GO:0070449]; integral component of membrane [GO:0016021]; nucleus [GO:0005634]; transcription elongation factor complex [GO:0008023]; imaginal disc-derived wing vein specification [GO:0007474]; positive regulation of transcription elongation from RNA polymerase II promoter [GO:0032968]; transcription elongation from RNA polymerase II promoter [GO:0006368] GO:0005634; GO:0006368; GO:0007474; GO:0008023; GO:0016021; GO:0032968; GO:0070449 TRINITY_DN3766_c0_g1_i18 2183 443 607 93 854.7939171 -2.436825632 0.429917186 -5.668127984 1.44e-08 3.84e-05 2 sp Q9XYC2 RL15_FAXLI 95.2 146 7 0 339 776 59 204 9e-76 285 RL15_ORCLI reviewed 60S ribosomal protein L15 RPL15 Orconectes limosus (Spinycheek crayfish) (Faxonius limosus) 204 translation [GO:0006412] ribosome [GO:0005840] structural constituent of ribosome [GO:0003735] ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412] GO:0003735; GO:0005840; GO:0006412 TRINITY_DN3766_c0_g1_i18 2183 443 607 93 854.7939171 -2.436825632 0.429917186 -5.668127984 1.44e-08 3.84e-05 2 sp Q9XYC2 RL15_FAXLI 96.6 58 2 0 76 249 1 58 5.5e-25 116.3 RL15_ORCLI reviewed 60S ribosomal protein L15 RPL15 Orconectes limosus (Spinycheek crayfish) (Faxonius limosus) 204 translation [GO:0006412] ribosome [GO:0005840] structural constituent of ribosome [GO:0003735] ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412] GO:0003735; GO:0005840; GO:0006412 TRINITY_DN3766_c0_g1_i18 2183 443 607 93 854.7939171 -2.436825632 0.429917186 -5.668127984 1.44e-08 3.84e-05 2 sp Q9XYC2 RL15_FAXLI 92 25 2 0 263 337 1 25 1.7e-05 51.6 RL15_ORCLI reviewed 60S ribosomal protein L15 RPL15 Orconectes limosus (Spinycheek crayfish) (Faxonius limosus) 204 translation [GO:0006412] ribosome [GO:0005840] structural constituent of ribosome [GO:0003735] ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412] GO:0003735; GO:0005840; GO:0006412 TRINITY_DN989_c0_g1_i6 0 34 0 88 29.39266734 8.296302093 2.479360483 3.346145972 0.000819432 0.045479627 1 sp Q805B4 TISDB_XENLA 35.4 113 53 4 1153 1476 132 229 2.3e-05 53.5 TISDB_XENLA reviewed mRNA decay activator protein ZFP36L2-B (CCCH zinc finger protein 3-B) (XC3H-3b) (Zinc finger protein 36, C3H1 type-like 2-B) zfp36l2-B zfp36l2 Xenopus laevis (African clawed frog) 364 3'-UTR-mediated mRNA destabilization [GO:0061158]; cellular response to epidermal growth factor stimulus [GO:0071364]; cellular response to fibroblast growth factor stimulus [GO:0044344]; cellular response to glucocorticoid stimulus [GO:0071385]; cellular response to granulocyte macrophage colony-stimulating factor stimulus [GO:0097011]; cellular response to phorbol 13-acetate 12-myristate [GO:1904628]; cellular response to transforming growth factor beta stimulus [GO:0071560]; cellular response to tumor necrosis factor [GO:0071356]; definitive hemopoiesis [GO:0060216]; ERK1 and ERK2 cascade [GO:0070371]; hemopoiesis [GO:0030097]; MAPK cascade [GO:0000165]; mRNA catabolic process [GO:0006402]; negative regulation of fat cell differentiation [GO:0045599]; negative regulation of mitotic cell cycle phase transition [GO:1901991]; negative regulation of stem cell differentiation [GO:2000737]; nephron tubule development [GO:0072080]; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:0000288]; nuclear-transcribed mRNA catabolic process, deadenylation-independent decay [GO:0031086]; positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:1900153]; pronephric nephron tubule development [GO:0039020]; pronephros development [GO:0048793]; regulation of B cell differentiation [GO:0045577]; regulation of mRNA stability [GO:0043488]; somatic stem cell division [GO:0048103]; somatic stem cell population maintenance [GO:0035019] cytoplasm [GO:0005737]; intracellular ribonucleoprotein complex [GO:0030529]; nucleus [GO:0005634] DNA binding [GO:0003677]; metal ion binding [GO:0046872]; mRNA 3'-UTR AU-rich region binding [GO:0035925] cytoplasm [GO:0005737]; intracellular ribonucleoprotein complex [GO:0030529]; nucleus [GO:0005634]; DNA binding [GO:0003677]; metal ion binding [GO:0046872]; mRNA 3'-UTR AU-rich region binding [GO:0035925]; 3'-UTR-mediated mRNA destabilization [GO:0061158]; cellular response to epidermal growth factor stimulus [GO:0071364]; cellular response to fibroblast growth factor stimulus [GO:0044344]; cellular response to glucocorticoid stimulus [GO:0071385]; cellular response to granulocyte macrophage colony-stimulating factor stimulus [GO:0097011]; cellular response to phorbol 13-acetate 12-myristate [GO:1904628]; cellular response to transforming growth factor beta stimulus [GO:0071560]; cellular response to tumor necrosis factor [GO:0071356]; definitive hemopoiesis [GO:0060216]; ERK1 and ERK2 cascade [GO:0070371]; hemopoiesis [GO:0030097]; MAPK cascade [GO:0000165]; mRNA catabolic process [GO:0006402]; negative regulation of fat cell differentiation [GO:0045599]; negative regulation of mitotic cell cycle phase transition [GO:1901991]; negative regulation of stem cell differentiation [GO:2000737]; nephron tubule development [GO:0072080]; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:0000288]; nuclear-transcribed mRNA catabolic process, deadenylation-independent decay [GO:0031086]; positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:1900153]; pronephric nephron tubule development [GO:0039020]; pronephros development [GO:0048793]; regulation of B cell differentiation [GO:0045577]; regulation of mRNA stability [GO:0043488]; somatic stem cell division [GO:0048103]; somatic stem cell population maintenance [GO:0035019] GO:0000165; GO:0000288; GO:0003677; GO:0005634; GO:0005737; GO:0006402; GO:0030097; GO:0030529; GO:0031086; GO:0035019; GO:0035925; GO:0039020; GO:0043488; GO:0044344; GO:0045577; GO:0045599; GO:0046872; GO:0048103; GO:0048793; GO:0060216; GO:0061158; GO:0070371; GO:0071356; GO:0071364; GO:0071385; GO:0071560; GO:0072080; GO:0097011; GO:1900153; GO:1901991; GO:1904628; GO:2000737 TRINITY_DN17977_c0_g1_i1 0 58 0 146 49.20526476 9.039908715 2.128822959 4.246435185 2.17e-05 0.004268917 1 sp Q4WAS9 SWR1_ASPFU 39.5 863 432 18 375 2876 820 1621 5e-153 543.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN14170_c0_g1_i1 0 103 0 185 70.51281101 9.616362332 1.949747635 4.932106166 8.13e-07 0.000666394 1 sp Q56XG6 RH15_ARATH 66 423 138 3 118 1377 6 425 4.9e-155 549.3 RH15_ARATH reviewed DEAD-box ATP-dependent RNA helicase 15 (EC 3.6.4.13) (UAP56 homolog A) RH15 UAP56A At5g11170 F2I11.60 Arabidopsis thaliana (Mouse-ear cress) 427 cellular response to DNA damage stimulus [GO:0006974]; mRNA export from nucleus [GO:0006406]; mRNA splicing, via spliceosome [GO:0000398]; regulation of gene expression [GO:0010468]; response to cadmium ion [GO:0046686]; RNA secondary structure unwinding [GO:0010501] cytoplasm [GO:0005737]; nucleolus [GO:0005730]; nucleus [GO:0005634]; plasmodesma [GO:0009506]; spliceosomal complex [GO:0005681] ATPase activity [GO:0016887]; ATP binding [GO:0005524]; ATP-dependent RNA helicase activity [GO:0004004]; double-stranded DNA binding [GO:0003690]; double-stranded RNA binding [GO:0003725]; single-stranded DNA binding [GO:0003697] cytoplasm [GO:0005737]; nucleolus [GO:0005730]; nucleus [GO:0005634]; plasmodesma [GO:0009506]; spliceosomal complex [GO:0005681]; ATP binding [GO:0005524]; ATP-dependent RNA helicase activity [GO:0004004]; ATPase activity [GO:0016887]; double-stranded DNA binding [GO:0003690]; double-stranded RNA binding [GO:0003725]; single-stranded DNA binding [GO:0003697]; cellular response to DNA damage stimulus [GO:0006974]; mRNA export from nucleus [GO:0006406]; mRNA splicing, via spliceosome [GO:0000398]; regulation of gene expression [GO:0010468]; response to cadmium ion [GO:0046686]; RNA secondary structure unwinding [GO:0010501] GO:0000398; GO:0003690; GO:0003697; GO:0003725; GO:0004004; GO:0005524; GO:0005634; GO:0005681; GO:0005730; GO:0005737; GO:0006406; GO:0006974; GO:0009506; GO:0010468; GO:0010501; GO:0016887; GO:0046686 TRINITY_DN116289_c0_g1_i1 0 92 0 127 54.29692983 9.261469093 2.073382035 4.466841584 7.94e-06 0.002427515 1 sp Q98TF5 RL39_CHICK 77.6 49 11 0 41 187 1 49 4.2e-15 82 RL39_CHICK reviewed 60S ribosomal protein L39 RPL39 Gallus gallus (Chicken) 51 translation [GO:0006412] cytosolic large ribosomal subunit [GO:0022625] RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735] cytosolic large ribosomal subunit [GO:0022625]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412] GO:0003723; GO:0003735; GO:0006412; GO:0022625 TRINITY_DN5692_c0_g1_i23 0 32 0 133 39.05937406 8.566827055 2.273907939 3.767446742 0.000164926 0.016888234 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1736_c0_g1_i7 0 27 0 122 35.17778778 8.389611819 2.346852928 3.574834928 0.000350449 0.02615765 1 sp Q8TDY2 RBCC1_HUMAN 38 92 50 2 282 545 1504 1592 2.6e-09 66.2 RBCC1_HUMAN reviewed RB1-inducible coiled-coil protein 1 (FAK family kinase-interacting protein of 200 kDa) (FIP200) RB1CC1 KIAA0203 RBICC Homo sapiens (Human) 1594 autophagosome assembly [GO:0000045]; autophagy [GO:0006914]; cell cycle [GO:0007049]; glycophagy [GO:0061723]; heart development [GO:0007507]; liver development [GO:0001889]; macroautophagy [GO:0016236]; mitophagy [GO:0000422]; negative regulation of extrinsic apoptotic signaling pathway [GO:2001237]; pexophagy [GO:0030242]; positive regulation of cell size [GO:0045793]; positive regulation of JNK cascade [GO:0046330]; positive regulation of protein phosphorylation [GO:0001934]; regulation of macroautophagy [GO:0016241]; regulation of transcription, DNA-templated [GO:0006355]; reticulophagy [GO:0061709]; transcription, DNA-templated [GO:0006351] ATG1/ULK1 kinase complex [GO:1990316]; cytosol [GO:0005829]; endoplasmic reticulum membrane [GO:0005789]; nuclear membrane [GO:0031965]; pre-autophagosomal structure membrane [GO:0034045] protein complex scaffold [GO:0032947]; protein kinase binding [GO:0019901] ATG1/ULK1 kinase complex [GO:1990316]; cytosol [GO:0005829]; endoplasmic reticulum membrane [GO:0005789]; nuclear membrane [GO:0031965]; pre-autophagosomal structure membrane [GO:0034045]; protein complex scaffold [GO:0032947]; protein kinase binding [GO:0019901]; autophagosome assembly [GO:0000045]; autophagy [GO:0006914]; cell cycle [GO:0007049]; glycophagy [GO:0061723]; heart development [GO:0007507]; liver development [GO:0001889]; macroautophagy [GO:0016236]; mitophagy [GO:0000422]; negative regulation of extrinsic apoptotic signaling pathway [GO:2001237]; pexophagy [GO:0030242]; positive regulation of cell size [GO:0045793]; positive regulation of JNK cascade [GO:0046330]; positive regulation of protein phosphorylation [GO:0001934]; regulation of macroautophagy [GO:0016241]; regulation of transcription, DNA-templated [GO:0006355]; reticulophagy [GO:0061709]; transcription, DNA-templated [GO:0006351] GO:0000045; GO:0000422; GO:0001889; GO:0001934; GO:0005789; GO:0005829; GO:0006351; GO:0006355; GO:0006914; GO:0007049; GO:0007507; GO:0016236; GO:0016241; GO:0019901; GO:0030242; GO:0031965; GO:0032947; GO:0034045; GO:0045793; GO:0046330; GO:0061709; GO:0061723; GO:1990316; GO:2001237 TRINITY_DN17449_c0_g1_i1 0 47 0 134 43.43654343 8.831579497 2.20308462 4.008733672 6.1e-05 0.008374593 1 sp Q9UNX4 WDR3_HUMAN 33.5 925 502 18 35 2545 3 902 3.4e-129 464.2 WDR3_HUMAN reviewed WD repeat-containing protein 3 WDR3 Homo sapiens (Human) 943 maturation of SSU-rRNA [GO:0030490]; rRNA processing [GO:0006364] nuclear membrane [GO:0031965]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]; nucleus [GO:0005634]; Pwp2p-containing subcomplex of 90S preribosome [GO:0034388]; small-subunit processome [GO:0032040] RNA binding [GO:0003723]; snoRNA binding [GO:0030515] nuclear membrane [GO:0031965]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]; nucleus [GO:0005634]; Pwp2p-containing subcomplex of 90S preribosome [GO:0034388]; small-subunit processome [GO:0032040]; RNA binding [GO:0003723]; snoRNA binding [GO:0030515]; maturation of SSU-rRNA [GO:0030490]; rRNA processing [GO:0006364] GO:0003723; GO:0005634; GO:0005654; GO:0005730; GO:0006364; GO:0030490; GO:0030515; GO:0031965; GO:0032040; GO:0034388 TRINITY_DN90_c1_g1_i7 0 147 0 35 48.61948652 8.698596823 2.140142577 4.064494075 4.81e-05 0.007271382 1 sp Q9LT78 RD21C_ARATH 41.5 313 164 8 127 1041 43 344 7.8e-59 229.6 RD21C_ARATH reviewed Probable cysteine protease RD21C (EC 3.4.22.-) RD21C At3g19390 MLD14.12 Arabidopsis thaliana (Mouse-ear cress) 452 cysteine-type peptidase activity [GO:0008234] cysteine-type peptidase activity [GO:0008234] GO:0008234 TRINITY_DN18945_c0_g1_i1 0 72 0 174 59.43779226 9.319658195 2.029247439 4.592667219 4.38e-06 0.001726073 1 sp Q0VCK0 PUR9_BOVIN 49.5 596 286 7 133 1905 7 592 1.9e-152 541.2 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1470_c0_g1_i1 0 28 0 102 30.91221485 8.277969397 2.441506448 3.390517115 0.000697609 0.041854574 1 sp O97172 U729_DROME 39.8 83 40 2 237 479 1 75 9.8e-10 68.6 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN19460_c0_g1_i1 0 39 0 92 31.68446842 8.423059059 2.419897578 3.480750234 0.000500012 0.033701726 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN8494_c0_g1_i19 0 56 0 148 49.10614814 9.025750859 2.130209966 4.237024051 2.27e-05 0.004346183 1 sp F4ISQ7 TOP3B_ARATH 43.7 535 259 16 676 2211 3 518 1e-105 386.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN7233_c1_g1_i2 0 18 0 143 37.45710905 8.248800426 2.309963662 3.570965449 0.000355668 0.026303364 1 sp P50520 VPS34_SCHPO 35.8 293 149 9 2591 3442 536 798 8.7e-39 164.5 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN13456_c0_g1_i4 0 42 0 90 32.06025552 8.457466924 2.410488094 3.508611781 0.000450452 0.031149919 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2145_c2_g1_i3 71 0 68 0 33.627512 -8.499905935 2.373415543 -3.581296988 0.000341893 0.025731356 3 sp Q8UVR5 BAZ1A_XENLA 29.2 271 134 5 1004 1780 50 274 4.2e-29 131.3 BAZ1A_XENLA reviewed Bromodomain adjacent to zinc finger domain protein 1A (ATP-utilizing chromatin assembly and remodeling factor 1) (xACF1) (Fragment) baz1a acf1 Xenopus laevis (African clawed frog) 627 regulation of transcription, DNA-templated [GO:0006355]; transcription, DNA-templated [GO:0006351] nucleus [GO:0005634] metal ion binding [GO:0046872] nucleus [GO:0005634]; metal ion binding [GO:0046872]; regulation of transcription, DNA-templated [GO:0006355]; transcription, DNA-templated [GO:0006351] GO:0005634; GO:0006351; GO:0006355; GO:0046872 TRINITY_DN13529_c0_g1_i2 0 69 0 117 45.66238709 8.997610915 2.170678996 4.145067479 3.4e-05 0.005652782 1 sp Q9FMU6 MPCP3_ARATH 43.4 297 152 6 54 941 77 358 5.9e-58 226.1 MPCP3_ARATH reviewed Mitochondrial phosphate carrier protein 3, mitochondrial (Mitochondrial phosphate transporter 3) (MPT3) (Phosphate transporter 3;1) MPT3 AT5 PHT3;1 At5g14040 MUA22_4 Arabidopsis thaliana (Mouse-ear cress) 375 mitochondrial transport [GO:0006839]; response to salt stress [GO:0009651] cell wall [GO:0005618]; chloroplast [GO:0009507]; integral component of membrane [GO:0016021]; membrane [GO:0016020]; mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]; vacuolar membrane [GO:0005774] phosphate ion transmembrane transporter activity [GO:0015114] cell wall [GO:0005618]; chloroplast [GO:0009507]; integral component of membrane [GO:0016021]; membrane [GO:0016020]; mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]; vacuolar membrane [GO:0005774]; phosphate ion transmembrane transporter activity [GO:0015114]; mitochondrial transport [GO:0006839]; response to salt stress [GO:0009651] GO:0005618; GO:0005739; GO:0005743; GO:0005774; GO:0006839; GO:0009507; GO:0009651; GO:0015114; GO:0016020; GO:0016021 TRINITY_DN18109_c0_g1_i3 0 53 0 136 45.55079065 8.925061704 2.173680437 4.105967718 4.03e-05 0.006447763 1 sp O77302 RS10_LUMRU 53.9 102 44 1 80 376 1 102 7.6e-23 109.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN3844_c0_g1_i13 99 0 163 0 61.72358645 -9.373109445 2.009579411 -4.664214509 3.1e-06 0.001466309 3 sp Q95TJ9 CYCG_DROME 34.9 327 187 6 654 1604 239 549 1.1e-40 170.6 CYCG_DROME reviewed Cyclin G CycG CG11525 Drosophila melanogaster (Fruit fly) 566 cell division [GO:0051301]; double-strand break repair [GO:0006302]; epithelium development [GO:0060429]; female meiotic nuclear division [GO:0007143]; meiotic DNA repair synthesis [GO:0000711]; multicellular organism development [GO:0007275]; negative regulation of G1/S transition of mitotic cell cycle [GO:2000134]; positive regulation of growth [GO:0045927]; regulation of Notch signaling pathway [GO:0008593]; regulation of transcription, DNA-templated [GO:0006355]; transcription, DNA-templated [GO:0006351] polytene chromosome [GO:0005700] cyclin-dependent protein serine/threonine kinase regulator activity [GO:0016538]; DNA binding [GO:0003677] polytene chromosome [GO:0005700]; cyclin-dependent protein serine/threonine kinase regulator activity [GO:0016538]; DNA binding [GO:0003677]; cell division [GO:0051301]; double-strand break repair [GO:0006302]; epithelium development [GO:0060429]; female meiotic nuclear division [GO:0007143]; meiotic DNA repair synthesis [GO:0000711]; multicellular organism development [GO:0007275]; negative regulation of G1/S transition of mitotic cell cycle [GO:2000134]; positive regulation of growth [GO:0045927]; regulation of Notch signaling pathway [GO:0008593]; regulation of transcription, DNA-templated [GO:0006355]; transcription, DNA-templated [GO:0006351] GO:0000711; GO:0003677; GO:0005700; GO:0006302; GO:0006351; GO:0006355; GO:0007143; GO:0007275; GO:0008593; GO:0016538; GO:0045927; GO:0051301; GO:0060429; GO:2000134 TRINITY_DN5291_c0_g1_i1 0 81 0 105 46.2570868 9.032055261 2.162490371 4.176691551 2.96e-05 0.00518319 1 sp Q24154 RL29_DROME 47.7 65 34 0 51 245 1 65 2.7e-07 57 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2470_c0_g1_i1 1 382 5 269 168.1343928 6.931879573 1.071970642 6.466482665 1e-10 1.04e-06 1 sp B1A4F7 VDDP4_VESVU 36 786 474 13 1850 4186 8 771 1.6e-137 492.7 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN27209_c0_g1_i1 0 108 0 93 51.00184371 9.151339267 2.10690842 4.343491714 1.4e-05 0.003433197 1 sp Q43292 RL372_ARATH 67.4 89 29 0 48 314 1 89 7.1e-29 128.3 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1678_c0_g1_i5 0 115 0 206 78.60221235 9.773023894 1.905129596 5.12984729 2.9e-07 0.000390585 1 sp Q3T0U2 RL14_BOVIN 36.2 127 81 0 57 437 2 128 6.3e-20 99 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN15504_c0_g1_i1 203 0 76 0 70.3812083 -9.347638865 1.9525509 -4.787398303 1.69e-06 0.001003061 2 sp Q9VZI3 UN112_DROME 58.8 716 249 15 546 2591 4 707 4.1e-231 802.7 UN112_DROME reviewed Unc-112-related protein (Fermitin-1) Fit1 CG14991 Drosophila melanogaster (Fruit fly) 708 cardiac muscle tissue development [GO:0048738]; cell-matrix adhesion [GO:0007160]; defense response to Gram-negative bacterium [GO:0050829] cytoplasm [GO:0005737] cell adhesion molecule binding [GO:0050839] cytoplasm [GO:0005737]; cell adhesion molecule binding [GO:0050839]; cardiac muscle tissue development [GO:0048738]; cell-matrix adhesion [GO:0007160]; defense response to Gram-negative bacterium [GO:0050829] GO:0005737; GO:0007160; GO:0048738; GO:0050829; GO:0050839 TRINITY_DN27990_c0_g1_i4 82 0 286 1 84.2024022 -8.364657991 1.710937949 -4.888931242 1.01e-06 0.000737113 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN682_c0_g1_i5 0 116 0 90 52.53387103 9.179775593 2.090936341 4.39027024 1.13e-05 0.003052224 1 sp Q3V009 TMED1_MOUSE 35.8 193 121 2 132 710 33 222 1.5e-25 119.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN793_c0_g1_i58 75 0 136 0 49.48320026 -9.044302652 2.124260137 -4.257624806 2.07e-05 0.004191041 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN12637_c0_g1_i2 0 58 0 98 38.30388056 8.745074753 2.282158104 3.831932037 0.000127141 0.014104028 1 sp Q66L33 MK16A_XENLA 54.4 195 86 2 200 781 1 193 1.1e-57 225.3 MK16A_XENLA reviewed Protein MAK16 homolog A (MAK16-like protein A) mak16-a mak16l-a Xenopus laevis (African clawed frog) 301 nucleolus [GO:0005730] nucleolus [GO:0005730] GO:0005730 TRINITY_DN1070_c0_g1_i3 0 78 0 62 35.66125202 8.624753372 2.331242433 3.69963812 0.000215907 0.019821576 1 sp O19110 TSPY1_BOVIN 27.2 213 139 9 60 677 107 310 8.1e-06 53.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN793_c0_g1_i21 0 106 0 63 43.63513763 8.86078958 2.198368068 4.030621491 5.56e-05 0.007955996 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN11104_c0_g1_i2 0 28 0 100 30.45799051 8.262950453 2.452952824 3.368572918 0.000755584 0.043261251 1 sp Q9SA73 OLA1_ARATH 57 386 157 3 139 1296 18 394 3.8e-125 450.3 OLA1_ARATH reviewed Obg-like ATPase 1 (Ribosome-binding ATPase YchF) (AtYchF1) YchF1 At1g30580 T5I8.3 Arabidopsis thaliana (Mouse-ear cress) 394 negative regulation of response to salt stress [GO:1901001]; response to cadmium ion [GO:0046686]; response to salt stress [GO:0009651] cytosol [GO:0005829]; plasmodesma [GO:0009506] ATPase activity [GO:0016887]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; metal ion binding [GO:0046872] cytosol [GO:0005829]; plasmodesma [GO:0009506]; ATP binding [GO:0005524]; ATPase activity [GO:0016887]; GTP binding [GO:0005525]; metal ion binding [GO:0046872]; negative regulation of response to salt stress [GO:1901001]; response to cadmium ion [GO:0046686]; response to salt stress [GO:0009651] GO:0005524; GO:0005525; GO:0005829; GO:0009506; GO:0009651; GO:0016887; GO:0046686; GO:0046872; GO:1901001 TRINITY_DN769_c1_g1_i5 0 136 0 60 51.25391551 9.010271032 2.106033131 4.278314002 1.88e-05 0.003894083 1 sp Q24537 HMG2_DROME 58.6 186 72 3 256 804 170 353 1.7e-56 222.2 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN17340_c0_g1_i18 0 38 0 99 32.99758314 8.460328905 2.389623864 3.540443763 0.000399455 0.02864642 1 sp P16100 IDH_AZOVI 57.7 737 298 5 150 2339 5 734 6.6e-243 842 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1726_c0_g2_i1 0 88 0 54 36.61105945 8.615386974 2.313271506 3.724330219 0.000195834 0.018688981 1 sp Q14590 ZN235_HUMAN 51.2 168 82 0 758 1261 461 628 4.1e-52 208.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN4168_c0_g1_i8 69 0 237 28 76.22529136 -4.853336722 1.451777994 -3.343029541 0.000828691 0.045479627 3 sp O24145 4CL1_TOBAC 34.5 516 318 9 259 1779 41 545 5.7e-73 276.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN4435_c0_g1_i7 0 278 30 135 114.1016029 5.284813372 1.379768591 3.830217186 0.00012803 0.014129095 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN862_c0_g1_i6 0 40 0 81 29.46290502 8.345199862 2.476425916 3.369856456 0.000752073 0.043176317 1 sp A7EJY3 DED1_SCLS1 51.6 417 187 4 131 1345 166 579 4.3e-109 397.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2394_c1_g1_i6 0 130 0 191 79.34558699 9.805215327 1.900963977 5.158022691 2.5e-07 0.000390585 1 sp Q8LC68 NRP2_ARATH 23.9 222 147 5 52 663 9 226 7.5e-18 93.2 NRP2_ARATH reviewed NAP1-related protein 2 (Nucleosome/chromatin assembly factor group A5) (Protein SET homolog 2) NRP2 NFA5 At1g18800 F6A14.10 Arabidopsis thaliana (Mouse-ear cress) 255 double-strand break repair via homologous recombination [GO:0000724]; nucleosome assembly [GO:0006334]; somatic cell DNA recombination [GO:0016444] cytoplasm [GO:0005737]; nucleus [GO:0005634] cytoplasm [GO:0005737]; nucleus [GO:0005634]; double-strand break repair via homologous recombination [GO:0000724]; nucleosome assembly [GO:0006334]; somatic cell DNA recombination [GO:0016444] GO:0000724; GO:0005634; GO:0005737; GO:0006334; GO:0016444 TRINITY_DN25474_c0_g1_i3 1 75 0 73 37.59472556 7.398962004 2.174527882 3.402560191 0.000667576 0.040741294 1 sp O15297 PPM1D_HUMAN 51.2 291 126 4 914 1774 99 377 9.8e-77 290.4 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN35867_c0_g1_i9 0 83 0 185 64.97940141 9.464178588 1.986702387 4.763762631 1.9e-06 0.001037731 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1473_c3_g1_i4 3 86 0 151 58.88335235 6.743321829 1.712717778 3.937205484 8.24e-05 0.010267863 1 sp P56941 NPC1_PIG 37.3 1441 660 29 338 4546 25 1259 2.2e-247 857.8 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN11884_c0_g1_i1 0 89 0 116 50.96868451 9.17182463 2.107246164 4.352516943 1.35e-05 0.003372345 1 sp Q8LC68 NRP2_ARATH 28.1 203 132 3 127 693 23 225 5.5e-21 103.2 NRP2_ARATH reviewed NAP1-related protein 2 (Nucleosome/chromatin assembly factor group A5) (Protein SET homolog 2) NRP2 NFA5 At1g18800 F6A14.10 Arabidopsis thaliana (Mouse-ear cress) 255 double-strand break repair via homologous recombination [GO:0000724]; nucleosome assembly [GO:0006334]; somatic cell DNA recombination [GO:0016444] cytoplasm [GO:0005737]; nucleus [GO:0005634] cytoplasm [GO:0005737]; nucleus [GO:0005634]; double-strand break repair via homologous recombination [GO:0000724]; nucleosome assembly [GO:0006334]; somatic cell DNA recombination [GO:0016444] GO:0000724; GO:0005634; GO:0005737; GO:0006334; GO:0016444 TRINITY_DN10564_c0_g1_i12 78 0 98 0 42.01133611 -8.832145238 2.221016282 -3.976623365 6.99e-05 0.00913384 3 sp O61585 KTNB1_STRPU 42 174 99 1 460 981 519 690 9.4e-34 147.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2510_c0_g2_i2 0 73 0 124 48.3588542 9.080005146 2.137215442 4.248521215 2.15e-05 0.004268917 1 sp P39981 AVT2_YEAST 24.4 401 257 14 175 1332 58 427 1.9e-10 70.1 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN2365_c0_g1_i25 0 101 0 220 77.90839603 9.72924303 1.909322324 5.095652477 3.48e-07 0.000393906 1 sp P12532 KCRU_HUMAN 50.8 372 163 5 180 1292 52 404 6.8e-102 372.9 NA NA NA NA NA NA NA NA NA NA NA TRINITY_DN1667_c0_g1_i5 0 137 0 75 54.93726855 9.172033311 2.068104398 4.434995312 9.21e-06 0.002650122 1 sp P0A9Y8 CSPC_ECO57 63.4 71 24 2 65 277 1 69 4.7e-16 87.4 NA NA NA NA NA NA NA NA NA NA NA