Preview

sidb-1.0.1
- .gitignore
  
  159 Bytes
- .travis.yml
  
  205 Bytes
- LICENSE
  
  1.1 kB
- Readme.md
  
  3.3 kB
- Rpkg
  - .Rbuildignore
    
    71 Bytes
  - .gitignore
    
    38 Bytes
  - DESCRIPTION
    
    848 Bytes
  - LICENSE
    
    1.1 kB
  - NAMESPACE
    
    611 Bytes
  - NEWS.md
    
    70 Bytes
  - R
    - carbon.R
      
      526 Bytes
    - coordinates.R
      
      505 Bytes
    - flatterSIDb.R
      
      7.7 kB
    - incubationTime.R
      
      381 Bytes
    - isCumulative.R
      
      633 Bytes
    - loadEntries.R
      
      640 Bytes
    - missingFields.R
      
      1.3 kB
    - nitrogen.R
      
      539 Bytes
    - onepFit.R
      
      1.6 kB
    - plotEntry.R
      
      813 Bytes
    - readEntry.R
      
      903 Bytes
    - sidb.R
      
      621 Bytes
    - threeppFit.R
      
      2.1 kB
    - threepsFit.R
      
      2.2 kB
    - treatmentLevels.R
      
      2.8 kB
    - treatmentNames.R
      
      1.5 kB
    - treatmentUnitNames.R
      
      985 Bytes
    - twopfFit.R
      
      2.2 kB
    - twoppFit.R
      
      2.0 kB
    - twopsFit.R
      
      2.1 kB
  - README.md
    
    634 Bytes
  - Rpkg.Rproj
    
    386 Bytes
  - cran-comments.md
    
    419 Bytes
  - data
    - sidb.RData
      
      123.6 kB
  - inst
    - extdata
      - sidbEntries
        
        Andrews2000SBB
        
        initConditions.csv
        
        345 Bytes
        
        metadata.yaml
        
        5.6 kB
        
        timeSeries.csv
        
        1.0 kB
        
        Sierra2017BG
        
        initConditions.csv
        
        314 Bytes
        
        metadata.yaml
        
        6.2 kB
        
        timeSeries.csv
        
        3.7 kB
      - template_metadata.yaml
        
        5.4 kB
  - man
    - carbon.Rd
      
      487 Bytes
    - coordinates.Rd
      
      486 Bytes
    - flatterSIDb.Rd
      
      678 Bytes
    - incubationTime.Rd
      
      492 Bytes
    - isCumulative.Rd
      
      567 Bytes
    - loadEntries.Rd
      
      618 Bytes
    - missingFields.Rd
      
      711 Bytes
    - nitrogen.Rd
      
      503 Bytes
    - onepFit.Rd
      
      654 Bytes
    - plotEntry.Rd
      
      395 Bytes
    - readEntry.Rd
      
      638 Bytes
    - sidb.Rd
      
      767 Bytes
    - threeppFit.Rd
      
      938 Bytes
    - threepsFit.Rd
      
      964 Bytes
    - treatmentLevels.Rd
      
      1.1 kB
    - treatmentNames.Rd
      
      1.0 kB
    - treatmentUnitNames.Rd
      
      712 Bytes
    - twopfFit.Rd
      
      926 Bytes
    - twoppFit.Rd
      
      901 Bytes
    - twopsFit.Rd
      
      911 Bytes
  - vignettes
    - .gitignore
      
      11 Bytes
    - sidbQueryReportPlot.Rmd
      
      3.7 kB
- data
  - Andrews2000SBB
    - initConditions.csv
      
      345 Bytes
    - metadata.yaml
      
      5.6 kB
    - timeSeries.csv
      
      1.0 kB
  - Arevalo2012
    - initConditions.csv
      
      877 Bytes
    - metadata.yaml
      
      6.8 kB
    - timeSeries.csv
      
      1.2 kB
  - Barrett2006
    - initConditions.csv
      
      442 Bytes
    - metadata.yaml
      
      10.3 kB
    - timeSeries.csv
      
      2.6 kB
  - Bracho2016SBB
    - initConditions.csv
      
      740 Bytes
    - metadata.yaml
      
      16.6 kB
    - timeseries.csv
      
      2.6 kB
  - Bradford2010
    - initConditions.csv
      
      827 Bytes
    - metadata.yaml
      
      11.0 kB
    - timeSeries.csv
      
      866 Bytes
  - BradleyCook2016
    - initConditions.csv
      
      539 Bytes
    - metadata.yaml
      
      20.4 kB
    - timeSeries.csv
      
      2.8 kB
  - Conant2008
    - initConditions.csv
      
      343 Bytes
    - metadata.yaml
      
      3.8 kB
    - timeSeries.csv
      
      547 Bytes
  - Craine2010NatGeo
    - initConditions.csv
      
      2.4 kB
    - metadata.yaml
      
      35.0 kB
    - timeseries.csv
      
      3.7 kB
  - Crow2019a
    - initConditions.csv
      
      8.0 kB
    - metadata.yaml
      
      47.2 kB
    - timeSeries.csv
      
      69.1 kB
  - Crow2019b
    - initConditions.csv
      
      1.7 kB
    - metadata.yaml
      
      26.0 kB
    - timeSeries.csv
      
      6.7 kB
  - Dalias2001
    - initConditions.csv
      
      627 Bytes
    - metadata.yaml
      
      27.0 kB
    - timeSeries.csv
      
      2.2 kB
  - Doetterl2015
    - initConditions.csv
      
      4.7 kB
    - metadata.yaml
      
      55.0 kB
    - timeSeries.csv
      
      3.3 kB
  - Fontaine2007
    - initConditions.csv
      
      195 Bytes
    - metadata.yaml
      
      5.7 kB
    - timeSeries.csv
      
      388 Bytes
  - Gillabel2010
    - initConditions.csv
      
      423 Bytes
    - metadata.yaml
      
      3.7 kB
    - timeSeries.csv
      
      337 Bytes
  - Haddix2011
    - initConditions.csv
      
      939 Bytes
    - metadata.yaml
      
      13.6 kB
    - timeSeries.csv
      
      2.9 kB
  - Hopkins2006
    - initConditions.csv
      
      773 Bytes
    - metadata.yaml
      
      6.6 kB
    - timeSeries.csv
      
      981 Bytes
  - Karhu2010
    - initConditions.csv
      
      794 Bytes
    - metadata.yaml
      
      16.3 kB
    - timeSeries.csv
      
      740 Bytes
  - Lavoie2011JGR
    - initConditions.csv
      
      816 Bytes
    - metadata.yaml
      
      6.6 kB
    - timeSeries.csv
      
      8.1 kB
  - NeffHooper2002
    - initConditions.csv
      
      724 Bytes
    - metadata.yaml
      
      12.0 kB
    - timeSeries.csv
      
      856 Bytes
  - Niklinska1999
    - initConditions.csv
      
      748 Bytes
    - metadata.yaml
      
      14.8 kB
    - timeSeries.csv
      
      1.9 kB
  - Readme.md
    
    10.8 kB
  - Reichstein2000
    - initConditions.csv
      
      394 Bytes
    - metadata.yaml
      
      6.9 kB
    - timeSeries.csv
      
      744 Bytes
  - Rey2008
    - initConditions.csv
      
      3.9 kB
    - metadata.yaml
      
      21.3 kB
    - timeSeries.csv
      
      3.3 kB
  - Salome2010
    - initConditions.csv
      
      392 Bytes
    - metadata.yaml
      
      4.0 kB
    - timeSeries.csv
      
      539 Bytes
  - Sierra2017BG
    - initConditions.csv
      
      314 Bytes
    - metadata.yaml
      
      6.2 kB
    - timeSeries.csv
      
      3.7 kB
  - Song2010
    - initConditions.csv
      
      317 Bytes
    - metadata.yaml
      
      6.0 kB
    - timeSeries.csv
      
      712 Bytes
  - Stewart2008SBB
    - initConditions.csv
      
      1.5 kB
    - metadata.yaml
      
      6.3 kB
    - timeSeries.csv
      
      1.9 kB
  - Townsend1997
    - initConditions.csv
      
      519 Bytes
    - metadata.yaml
      
      12.1 kB
    - timeSeries.csv
      
      822 Bytes
  - Wang2010
    - initConditions.csv
      
      367 Bytes
    - metadata.yaml
      
      29.5 kB
    - timeSeries.csv
      
      2.1 kB
  - WicklandNeff2008
    - initConditions.csv
      
      541 Bytes
    - metadata.yaml
      
      34.9 kB
    - timeSeries.csv
      
      1.8 kB
  - Winkler1996
    - initConditions.csv
      
      142 Bytes
    - metadata.yaml
      
      11.3 kB
    - timeSeries.csv
      
      763 Bytes
  - Zhang2007
    - initConditions.csv
      
      376 Bytes
    - metadata.yaml
      
      8.1 kB
    - timeSeries.csv
      
      2.5 kB
  - initConditions.csv
    
    617 Bytes
  - studies_list.csv
    
    1.1 kB
  - template_metadata.yaml
    
    5.6 kB
  - template_metadata_workingfile.yaml
    
    5.5 kB
- demo
  - Readme.md
    
    100 Bytes
  - Summary.Rmd
    
    2.2 kB
  - Summary.html
    
    1.1 MB
  - Summary.md
    
    11.2 kB
  - Summary.pdf
    
    247.5 kB
  - figure
    - unnamed-chunk-3-1.png
      
      42.6 kB
    - unnamed-chunk-7-1.png
      
      16.2 kB
    - unnamed-chunk-8-1.png
      
      34.4 kB
  - modelFit.Rmd
    
    4.3 kB
- docs
  - LICENSE.txt
    
    17.1 kB
  - README.txt
    
    1.5 kB
  - _config.yml
    
    564 Bytes
  - _data
    - entries
      - Andrews2000SBB.yaml
        
        5.6 kB
      - Arevalo2012.yaml
        
        6.8 kB
      - Barrett2006.yaml
        
        10.3 kB
      - Bracho2016SBB.yaml
        
        16.6 kB
      - Bradford2010.yaml
        
        11.0 kB
      - BradleyCook2016.yaml
        
        20.4 kB
      - Conant2008.yaml
        
        3.8 kB
      - Craine2010NatGeo.yaml
        
        35.0 kB
      - Crow2019a.yaml
        
        47.2 kB
      - Crow2019b.yaml
        
        26.0 kB
      - Dalias2001.yaml
        
        27.0 kB
      - Doetterl2015.yaml
        
        55.0 kB
      - Fontaine2007.yaml
        
        5.7 kB
      - Gillabel2010.yaml
        
        3.7 kB
      - Haddix2011.yaml
        
        13.6 kB
      - Hopkins2006.yaml
        
        6.6 kB
      - Karhu2010.yaml
        
        16.3 kB
      - Lavoie2011JGR.yaml
        
        6.6 kB
      - NeffHooper2002.yaml
        
        12.0 kB
      - Niklinska1999.yaml
        
        14.8 kB
      - Reichstein2000.yaml
        
        6.9 kB
      - Rey2008.yaml
        
        21.3 kB
      - Salome2010.yaml
        
        4.0 kB
      - Sierra2017BG.yaml
        
        6.2 kB
      - Song2010.yaml
        
        6.0 kB
      - Stewart2008SBB.yaml
        
        6.3 kB
      - Townsend1997.yaml
        
        12.1 kB
      - Wang2010.yaml
        
        29.5 kB
      - WicklandNeff2008.yaml
        
        34.9 kB
      - Winkler1996.yaml
        
        11.3 kB
      - Zhang2007.yaml
        
        8.1 kB
    - summary.yml
      
      48 Bytes
  - _includes
    - banner.html
      
      739 Bytes
    - footer.html
      
      759 Bytes
    - head.html
      
      1.6 kB
    - header.html
      
      1.2 kB
  - _layouts
    - default.html
      
      224 Bytes
    - landing-page.html
      
      251 Bytes
    - post.html
      
      680 Bytes
  - _posts
    - 2018-08-21-intro.md
      
      842 Bytes
  - assets
    - incubationTime.png
      
      12.0 kB
    - map.png
      
      32.8 kB
    - pic01.jpg
      
      9.7 kB
    - pic02.jpg
      
      10.3 kB
    - pic03.jpg
      
      9.7 kB
    - pic04.jpg
      
      10.1 kB
  - blog.html
    
    873 Bytes
  - contact.html
    
    4.3 kB
  - css
    - font-awesome.min.css
      
      22.0 kB
    - ie
      - backgroundsize.min.htc
        
        3.8 kB
      - html5shiv.js
        
        2.4 kB
      - v8.css
        
        783 Bytes
      - v9.css
        
        185 Bytes
    - images
      - dark-bl.svg
        
        646 Bytes
      - dark-br.svg
        
        660 Bytes
      - dark-tl.svg
        
        632 Bytes
      - dark-tr.svg
        
        646 Bytes
      - light-bl.svg
        
        650 Bytes
      - light-br.svg
        
        664 Bytes
      - light-tl.svg
        
        636 Bytes
      - light-tr.svg
        
        650 Bytes
      - overlay.png
        
        15.6 kB
    - skel.css
      
      5.0 kB
    - style-mobile.css
      
      2.3 kB
    - style-narrow.css
      
      931 Bytes
    - style-narrower.css
      
      1.5 kB
    - style-normal.css
      
      765 Bytes
    - style-noscript.css
      
      185 Bytes
    - style-wide.css
      
      291 Bytes
    - style.css
      
      21.7 kB
  - entries
    - index.md
      
      305 Bytes
  - feed.xml
    
    1.3 kB
  - fonts
    - FontAwesome.otf
      
      85.9 kB
    - fontawesome-webfont.eot
      
      56.0 kB
    - fontawesome-webfont.svg
      
      287.0 kB
    - fontawesome-webfont.ttf
      
      112.2 kB
    - fontawesome-webfont.woff
      
      65.5 kB
  - images
    - banner.jpg
      
      129.6 kB
    - pic01.jpg
      
      48.9 kB
    - pic02.jpg
      
      56.2 kB
    - pic03.jpg
      
      54.5 kB
    - pic04.jpg
      
      27.5 kB
  - index.html
    
    3.2 kB
  - js
    - init.js
      
      6.5 kB
    - jquery.dropotron.min.js
      
      4.3 kB
    - jquery.min.js
      
      95.8 kB
    - jquery.scrollgress.min.js
      
      2.9 kB
    - jquery.scrolly.min.js
      
      512 Bytes
    - skel-layers.min.js
      
      15.2 kB
    - skel.min.js
      
      21.0 kB
  - left-sidebar.html
    
    8.1 kB
  - no-sidebar.html
    
    3.8 kB
  - references.md
    
    7.2 kB
  - right-sidebar.html
    
    8.1 kB
- manuscript
  - Histograms.R
    
    3.9 kB
  - HistogramsAug28_2019.pdf
    
    5.6 kB
  - SIDB_mapCode.R
    
    3.9 kB
  - modelFit.Rmd
    
    4.3 kB
  - modelFit.docx
    
    52.1 kB
  - modelsFit.pdf
    
    38.8 kB
- out
  - Readme.md
    
    105 Bytes
  - baseMetadata.csv
    
    54.6 kB
- scripts
  - Readme.md
    
    91 Bytes
  - baseMetadata.R
    
    331 Bytes
  - docInstall.sh
    
    95 Bytes
  - mkReferences.R
    
    548 Bytes
  - modelsFit.R
    
    2.4 kB
  - pkgDocumentation.R
    
    164 Bytes
  - queryReportPlot_vignette.R
    
    2.8 kB
  - saveBinaryData.R
    
    99 Bytes
  - websiteReports.R
    
    925 Bytes
- tests
  - Readme.md
    
    978 Bytes
  - data_test.R
    
    127 Bytes
  - non_ascii_test.sh
    
    164 Bytes
  - pkg_test.sh
    
    83 Bytes
  - testthat
    - test_dataStructure.R
      
      4.3 kB

sidb-1.0.1.zip