API examples
axis-margin.html
cursor-location.html
default-track-options.html
get-min-max-value.html
load-annotations
mouse-move-zoom.html
reset-viewport.html
set-track-value-scale-limits.html
svg.html
trackViewer.html
zoom-to.html
Other
mapbox.html
adjust-view-spacing.html
global-mouse-position.html
test_drag.html
scrollable-container.html
Viewconf examples
2d-chromosome-grid
2d-rectangle-domains
chromosome-grid
combined
cross-rule
divided
heatmap
horizontal-1d-annotations
horizontal-1d-heatmap
horizontal-2d-rectangle-domains
horizontal-bar
horizontal-chromosome-labels
horizontal-gene-annotations
horizontal-heatmap
horizontal-line
horizontal-point
horizontal-stacked-bar
osm-tiles
vertical-1d-annotations
vertical-1d-heatmap
vertical-bar
vertical-chromosome-labels
vertical-gene-annotations
vertical-line
viewport-projection-center
local
diagonal-split-heatmap.json
😍
1d-annotations.json
X
X
X
X
X
X
X
X
X
X
1d-constant-indicators.json
X
X
X
X
X
1d-heatmap-track-2.json
X
X
X
1d-heatmap-track.json
X
X
X
X
X
X
X
X
X
X
X
X
axis-margin.json
X
X
X
X
X
X
bar-track-color-range.json
X
X
X
bar-track.json
X
bar-zero-line.json
X
X
X
X
bedlike-track.json
X
bigwig-aggregation-modes.json
X
X
X
X
chromosome-labels.json
X
X
X
X
default.json
X
X
X
X
X
X
X
X
X
X
X
X
gene-annotations.json
X
X
label-margin.json
X
X
X
X
X
X
overlay-chromosome-grid-track.json
X
X
X
X
X
X
X
X
overlay-track.json
X
X
X
X
X
X
X
X
overlay-tracks.json
X
X
X
X
X
X
X
X
fancy-tracks.json
X
X
X
X
X
X
X
X
higlass.io
Epilogos
X
X
X
HiC Data vs. Maps
X
X
X
X
X
X
X
Comparison of different balancing methods (VC, KR, and ICE)
X
X
X
X
2D TAD caller comparison (Forcato et al 2017, Fig. 3)
X
X
X
X
X
TAD caller comparison (Forcato et al 2017, Fig. 3)
X
X
X
Figure 1 from HiGlass paper (Kerpedjiev et al 2017, data from Schwarzer et al 2017)
X
X
X
X
X
X
X
X
Figure 2 from HiGlass paper (Kerpedjiev et al 2017, data from Schwarzer et al 2017)
X
X
X
X
X
X
X
X
X
Two independent views
X
X
X
X
X
X
Chromosome grid
X
X
X
X
X
X
X
Six linked views
X
X
X
X
X
X
A lone blemish
X
X
X
X
X
X
A potential structural variant in K562
X
X
X
X
X
X
Zoom limited view
X
X
X
X
X
X
Horizontal diagonal heatmap
X
X
X
Exceptionally strong regions
X
X
X
X
X
X
X
Effect of RAD21 cleavage
X
X
X
Variable region
X
X
X
X
X
X
Stronger contacts between chr17 and chr19 than between chr17 and chr18
X
X
X
X
X
X
Mini-views
X
X
X
X
X
X
X
Structural variant in GM12878?
X
X
X
X
X
X
Weak bin
X
X
X
X
X
X
Standout streak
X
X
X
X
X
X
Diagonal and off-diagonal
X
X
X
X
X
One overview and three detail views
X
X
X
X
X