GTEx_GWAS Tag PUBMED_Paper_Link Pheno_File Source_File Portal Consortium Link Notes Header Hidden Keep EFO HPO Description Phenotype Sample_Size Population Date Declared_Effect_Allele Genome_Reference Binary Cases abbreviation new_abbreviation new_Phenotype Category Deflation color Yes UKB_1160_Sleep_duration http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 1160.assoc.tsv.gz 1160.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/00v10oxwku3u5yq/1160.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Sleep duration 337119 NA NA NA NA 0 NA U_SL SLEEP_UKB Sleep_Duration_UKB Psychiatric-neurologic 0 #0000A0 Yes UKB_1180_Morning_or_evening_person_chronotype http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 1180.assoc.tsv.gz 1180.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/z7cppp7ndmylpf0/1180.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Morning/evening person (chronotype) 337119 NA NA NA NA 0 NA U_CHR CHRONO_UKB Chronotype_UKB Psychiatric-neurologic 0 #0000A0 Yes UKB_1200_Sleeplessness_or_insomnia http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 1200.assoc.tsv.gz 1200.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/ugt1g44ycju9ms5/1200.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Sleeplessness / insomnia 337119 NA NA NA NA 0 NA U_NSL INSOMN_UKB Insomnia_UKB Psychiatric-neurologic 0 #0000A0 Yes UKB_1807_Fathers_age_at_death http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 1807.assoc.tsv.gz 1807.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/qftvyi5a9qkb5xw/1807.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Father's age at death 337119 NA NA NA NA 0 NA U_FAD FAD_UKB Fathers_Age_At_Death_UKB Aging 0 #400040 Yes UKB_20002_1094_self_reported_deep_venous_thrombosis_dvt http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1094.assoc.tsv.gz 20002_1094.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/0smh60npg2eihqv/20002_1094.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: deep venous thrombosis (dvt) 337119 NA NA NA NA 1 6767 UN_DVT DVT_UKBS Deep_Venous_Thrombosis_UKBS Cardiometabolic 0 #004000 Yes UKB_20002_1111_self_reported_asthma http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1111.assoc.tsv.gz 20002_1111.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/fd8e27ds4vuxj6l/20002_1111.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: asthma 337119 NA NA NA NA 1 39049 UN_AS ATH_UKBS Asthma_UKBS Allergy 0 #FFFF00 Yes UKB_20002_1154_self_reported_irritable_bowel_syndrome http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1154.assoc.tsv.gz 20002_1154.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/p70cilcudfww9y1/20002_1154.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: irritable bowel syndrome 337119 NA NA NA NA 1 8030 UN_IBS IBS_UKBS Irritable_Bowel_Syndrome_UKBS Digestive system disease 0 #40B000 Yes UKB_20002_1222_self_reported_type_1_diabetes http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1222.assoc.tsv.gz 20002_1222.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/qdouyjozmguv5c4/20002_1222.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: type 1 diabetes 337119 NA NA NA NA 1 286 UN_T1D T1D_UKBS Type_1_Diabetes_UKBS Immune 0 #40A0A0 Yes UKB_20002_1223_self_reported_type_2_diabetes http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1223.assoc.tsv.gz 20002_1223.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/7jrmk2sa9kcs7jr/20002_1223.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: type 2 diabetes 337119 NA NA NA NA 1 2133 UN_T2D T2D_UKBS Type_2_Diabetes_UKBS Cardiometabolic 0 #004000 Yes UKB_20002_1225_self_reported_hyperthyroidism_or_thyrotoxicosis http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1225.assoc.tsv.gz 20002_1225.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/yd5g6p6lsce5iwa/20002_1225.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: hyperthyroidism/thyrotoxicosis 337119 NA NA NA NA 1 2547 UN_HT HYPERTHY_UKBS Hyperthyroidism_UKBS Endocrine system 0 #FF8000 Yes UKB_20002_1226_self_reported_hypothyroidism_or_myxoedema http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1226.assoc.tsv.gz 20002_1226.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/d2xdky67ra5u0ri/20002_1226.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: hypothyroidism/myxoedema 337119 NA NA NA NA 1 16376 UN_LT HYPOTHY_UKBS Hypothyroidism_UKBS Endocrine system 0 #FF8000 Yes UKB_20002_1243_self_reported_psychological_or_psychiatric_problem http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1243.assoc.tsv.gz 20002_1243.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/hg2epsyb7fx79c4/20002_1243.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: psychological/psychiatric problem 337119 NA NA NA NA 1 323 UN_PSY PSY_UKBS Psychological_Problem_UKBS Psychiatric-neurologic 0 #0000A0 Yes UKB_20002_1261_self_reported_multiple_sclerosis http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1261.assoc.tsv.gz 20002_1261.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/m9ser6j9sx46qgf/20002_1261.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: multiple sclerosis 337119 NA NA NA NA 1 1228 UN_ME MS_UKBS Multiple_Sclerosis_UKBS Psychiatric-neurologic 0 #0000A0 Yes UKB_20002_1262_self_reported_parkinsons_disease http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1262.assoc.tsv.gz 20002_1262.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/jk2s8959wpwb38k/20002_1262.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: parkinsons disease 337119 NA NA NA NA 1 604 UN_P PD_UKBS Parkinsons_Disease_UKBS Psychiatric-neurologic 0 #0000A0 Yes UKB_20002_1265_self_reported_migraine http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1265.assoc.tsv.gz 20002_1265.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/wcho3m0hzhvcavl/20002_1265.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: migraine 337119 NA NA NA NA 1 10007 UN_MIG MIGR_UKBS Migraine_UKBS Psychiatric-neurologic 0 #0000A0 Yes UKB_20002_1289_self_reported_schizophrenia http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1289.assoc.tsv.gz 20002_1289.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/ni8t4mog0vgwuxw/20002_1289.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: schizophrenia 337119 NA NA NA NA 1 337 UN_SCZ SCZ_UKBS Schizophrenia_UKBS Psychiatric-neurologic 0 #0000A0 Yes UKB_20002_1309_self_reported_osteoporosis http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1309.assoc.tsv.gz 20002_1309.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/xw83bh3e7sttvi0/20002_1309.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: osteoporosis 337119 NA NA NA NA 1 5266 UN_OST OST_UKBS Osteoporosis_UKBS Skeletal system disease 0 #B0B0FF Yes UKB_20002_1313_self_reported_ankylosing_spondylitis http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1313.assoc.tsv.gz 20002_1313.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/jprqeoualeo13b1/20002_1313.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: ankylosing spondylitis 337119 NA NA NA NA 1 968 UN_ASP ASP_UKBS Ankylosing_Spondylitis_UKBS Immune 0 #40A0A0 Yes UKB_20002_1452_self_reported_eczema_or_dermatitis http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1452.assoc.tsv.gz 20002_1452.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/cc82wjw0gcztish/20002_1452.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: eczema/dermatitis 337119 NA NA NA NA 1 8718 UN_ECZ ECZ_UKBS Eczema_UKBS Allergy 0 #FFFF00 Yes UKB_20002_1453_self_reported_psoriasis http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1453.assoc.tsv.gz 20002_1453.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/fa3gnr5oc5fnm70/20002_1453.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: psoriasis 337119 NA NA NA NA 1 3871 UN_PSO PSO_UKBS Psoriasis_UKBS Immune 0 #40A0A0 Yes UKB_20002_1461_self_reported_inflammatory_bowel_disease http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1461.assoc.tsv.gz 20002_1461.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/ple1ovkvptl5uo0/20002_1461.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: inflammatory bowel disease 337119 NA NA NA NA 1 129 UN_IBD IBD_UKBS Inflammatory_Bowel_Disease_UKBS Immune 0 #40A0A0 Yes UKB_20002_1462_self_reported_crohns_disease http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1462.assoc.tsv.gz 20002_1462.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/khzx4kgtri5pfpd/20002_1462.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: crohns disease 337119 NA NA NA NA 1 28257 UN_CD CD_UKBS Crohns_Disease_UKBS Immune 0 #40A0A0 Yes UKB_20002_1463_self_reported_ulcerative_colitis http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1463.assoc.tsv.gz 20002_1463.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/ks1z0w3yutugblk/20002_1463.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: ulcerative colitis 337119 NA NA NA NA 1 1795 UN_UC UC_UKBS Ulcerative_Colitis_UKBS Immune 0 #40A0A0 Yes UKB_20002_1464_self_reported_rheumatoid_arthritis http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1464.assoc.tsv.gz 20002_1464.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/7szllkrqvsfykrf/20002_1464.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: rheumatoid arthritis 337119 NA NA NA NA 1 3730 UN_RA RA_UKBS Rheumatoid_Arthritis_UKBS Immune 0 #40A0A0 Yes UKB_20002_1466_self_reported_gout http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1466.assoc.tsv.gz 20002_1466.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/lyem529sia8ya2t/20002_1466.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: gout 337119 NA NA NA NA 1 4807 UN_GOU GOUT_UKBS Gout_UKBS Skeletal system disease 0 #B0B0FF Yes UKB_20002_1473_self_reported_high_cholesterol http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1473.assoc.tsv.gz 20002_1473.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/cqt15lbdhcctx57/20002_1473.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: high cholesterol 337119 NA NA NA NA 1 41296 UN_HC HC_UKBS High_Cholesterol_UKBS Cardiometabolic 0 #004000 Yes UKB_20002_1616_self_reported_insomnia http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1616.assoc.tsv.gz 20002_1616.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/w9gp25afc0ngle5/20002_1616.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: insomnia 337119 NA NA NA NA 1 321 UN_NSL INSOMN_UKBS Insomnia_UKBS Psychiatric-neurologic 0 #0000A0 Yes UKB_20016_Fluid_intelligence_score http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20016.assoc.tsv.gz 20016.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/shsiq0brkax886j/20016.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Fluid intelligence score 337119 NA NA NA NA 0 NA U_FIS FIS_UKB Fluid_Intelligence_Score_UKB Psychiatric-neurologic 0 #0000A0 Yes UKB_20022_Birth_weight http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20022.assoc.tsv.gz 20022.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/81sd0kd4kpf7q2s/20022.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Birth weight 337119 NA NA NA NA 0 NA U_BW BW_UKB Birth_Weight_UKB Anthropometric 0 #404040 Yes UKB_20127_Neuroticism_score http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20127.assoc.tsv.gz 20127.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/78115y0ypy7l3gq/20127.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Neuroticism score 337119 NA NA NA NA 0 NA U_NS NEUROT_UKB Neuroticism_UKB Psychiatric-neurologic 0 #0000A0 Yes UKB_21001_Body_mass_index_BMI http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 21001.assoc.tsv.gz 21001.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/sweqn7nztyv42zt/21001.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Body mass index (BMI) 337119 NA NA NA NA 0 NA U_BMI BMI_UKB BMI_UKB Anthropometric 0 #404040 Yes UKB_23099_Body_fat_percentage http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 23099.assoc.tsv.gz 23099.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/dte97da03uwbsrm/23099.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Body fat percentage 337119 NA NA NA NA 0 NA U_BFP FAT_UKB Body_Fat_Percentage_UKB Anthropometric 0 #404040 Yes UKB_2395_2_Hair_or_balding_pattern_Pattern_2 http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 2395_2.assoc.tsv.gz 2395_2.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/tz3lfk4ujeam5cz/2395_2.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Hair/balding pattern: Pattern 2 337119 NA NA NA NA 1 35563 U_BP2 BLDP2_UKB Balding_Pattern_2_UKB Hair morphology 0 #808000 Yes UKB_2395_3_Hair_or_balding_pattern_Pattern_3 http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 2395_3.assoc.tsv.gz 2395_3.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/gwve5x7ys82vkzv/2395_3.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Hair/balding pattern: Pattern 3 337119 NA NA NA NA 1 41584 U_BP3 BLDP3_UKB Balding_Pattern_3_UKB Hair morphology 0 #808000 Yes UKB_2395_4_Hair_or_balding_pattern_Pattern_4 http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 2395_4.assoc.tsv.gz 2395_4.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/5kve1cndcyr0ah1/2395_4.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Hair/balding pattern: Pattern 4 337119 NA NA NA NA 1 28389 U_BP4 BLDP4_UKB Balding_Pattern_4_UKB Hair morphology 0 #808000 Yes UKB_3526_Mothers_age_at_death http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 3526.assoc.tsv.gz 3526.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/ezr499ww01vlgax/3526.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Mother's age at death 337119 NA NA NA NA 0 NA U_MAD MAD_UKB Mothers_Age_At_Death_UKB Aging 0 #400040 Yes UKB_50_Standing_height http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 50.assoc.tsv.gz 50.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/sbfgb6qd5i4cxku/50.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Standing height 337119 NA NA NA NA 0 NA UN_HEI HEIGHT_UKB Standing_Height_UKB Anthropometric 0 #404040 Yes UKB_6150_1_Vascular_or_heart_problems_diagnosed_by_doctor_Heart_attack http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 6150_1.assoc.tsv.gz 6150_1.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/pjyorxb39dtpoou/6150_1.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Vascular/heart problems diagnosed by doctor: Heart attack 337119 NA NA NA NA 1 7790 UD_HA MI_UKB Heart_Attack_UKB Cardiometabolic 0 #004000 Yes UKB_6152_5_diagnosed_by_doctor_Blood_clot_in_the_leg_DVT http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 6152_5.assoc.tsv.gz 6152_5.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/epi4uhl6m71n9gm/6152_5.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Blood clot, DVT, bronchitis, emphysema, asthma, rhinitis, eczema, allergy diagnosed by doctor: Blood clot in the leg (DVT) 337119 NA NA NA NA 1 6905 UD_DVT DVT_UKB Deep_Venous_Thrombosis_UKB Cardiometabolic 0 #004000 Yes UKB_6152_7_diagnosed_by_doctor_Blood_clot_in_the_lung http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 6152_7.assoc.tsv.gz 6152_7.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/th4z4pwcj982qcc/6152_7.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Blood clot, DVT, bronchitis, emphysema, asthma, rhinitis, eczema, allergy diagnosed by doctor: Blood clot in the lung 337119 NA NA NA NA 1 2788 UD_BCL PE_UKB Pulmonary_Embolism_UKB Cardiometabolic 0 #004000 Yes UKB_6152_8_diagnosed_by_doctor_Asthma http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 6152_8.assoc.tsv.gz 6152_8.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/mpqf0ennkp29bi2/6152_8.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Blood clot, DVT, bronchitis, emphysema, asthma, rhinitis, eczema, allergy diagnosed by doctor: Asthma 337119 NA NA NA NA 1 38791 UD_AS ATH_UKB Asthma_UKB Immune 0 #40A0A0 Yes UKB_6152_9_diagnosed_by_doctor_Hayfever_allergic_rhinitis_or_eczema http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 6152_9.assoc.tsv.gz 6152_9.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/3irbawcy1m9no8u/6152_9.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Blood clot, DVT, bronchitis, emphysema, asthma, rhinitis, eczema, allergy diagnosed by doctor: Hayfever, allergic rhinitis or eczema 337119 NA NA NA NA 1 77891 UD_HAR HAY_UKB Hayfever_UKB Immune 0 #40A0A0 Yes UKB_G40_Diagnoses_main_ICD10_G40_Epilepsy http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 G40.assoc.tsv.gz G40.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/gem3l0ilndrww9z/G40.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Diagnoses - main ICD10: G40 Epilepsy 337119 NA NA NA NA 1 594 UG_EPI EPI_UKB Epilepsy_UKB Psychiatric-neurologic 0 #0000A0 Yes UKB_G43_Diagnoses_main_ICD10_G43_Migraine http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 G43.assoc.tsv.gz G43.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/02use6vjr93hqz7/G43.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Diagnoses - main ICD10: G43 Migraine 337119 NA NA NA NA 1 734 UG_MIG MIGR_UKB Migraine_UKB Psychiatric-neurologic 0 #0000A0 Yes UKB_20002_1065_self_reported_hypertension http://biobank.ctsu.ox.ac.uk/showcase/field.cgi?id=41202 20002_1065.assoc.tsv.gz 20002_1065.assoc.tsv.gz http://biobank.ctsu.ox.ac.uk/ UK Biobank https://www.dropbox.com/s/qf9kdp8a0bw9jrv/20002_1065.assoc.tsv.gz?dl=0 NA NA NA Yes NA NA NA Non-cancer illness code, self-reported: hypertension 337119 NA NA NA NA 1 87690 UN_HPT HPT_UKBS Hypertension_UKBS Cardiometabolic 0 #004000 Yes ADIPOGen_Adiponectin http://www.ncbi.nlm.nih.gov/pubmed/22479202 adipogen.discovery.eur_.meta_.public.release.part1_.txt adipogen.discovery.eur_.meta_.public.release.part1_.txt http://www.mcgill.ca/genepi/adipogen-consortium ADIPOGen http://www.mcgill.ca/genepi/files/genepi/adipogen.discovery.eur_.meta_.public.release.part1_.txt NA NA NA Yes EFO_0004502 NA NA Adiponectin 39883 EUR NA NA b36/hg18 0 NA ANT ADPN Adiponectin Cardiometabolic 1 #004000 Yes Astle_et_al_2016_Eosinophil_counts https://www.ncbi.nlm.nih.gov/pubmed/27863252 eo_build37_172275_20161212.tsv.gz eo_build37_172275_20161212.tsv.gz http://www.ebi.ac.uk/gwas/downloads/summary-statistics Astle_et_al_2016 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/AstleWJ_27863252_GCST004606/eo_build37_172275_20161212.tsv.gz NA VARIANT ID CHR BP REF ALT ALT_MINOR DIRECTION EFFECT SE P MLOG10P ALT_FREQ MA_FREQ NA Yes EFO_0004842 NA NA Eosinophil counts 173480 EUR NA NA b37/hg19 0 NA BEC EC Eosinophil_Count Blood 0 #C00000 Yes Astle_et_al_2016_Granulocyte_count https://www.ncbi.nlm.nih.gov/pubmed/27863252 gran_build37_169822_20161212.tsv.gz gran_build37_169822_20161212.tsv.gz http://www.ebi.ac.uk/gwas/downloads/summary-statistics Astle_et_al_2016 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/AstleWJ_27863252_GCST004614/gran_build37_169822_20161212.tsv.gz NA VARIANT ID CHR BP REF ALT ALT_MINOR DIRECTION EFFECT SE P MLOG10P ALT_FREQ MA_FREQ NA Yes EFO_0007987 NA NA Granulocyte count 173480 EUR NA NA b37/hg19 0 NA BGC GC Granulocyte_Count Blood 0 #C00000 Yes Astle_et_al_2016_High_light_scatter_reticulocyte_count https://www.ncbi.nlm.nih.gov/pubmed/27863252 hlr_build37_170761_20161212.tsv.gz hlr_build37_170761_20161212.tsv.gz http://www.ebi.ac.uk/gwas/downloads/summary-statistics Astle_et_al_2016 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/AstleWJ_27863252_GCST004611/hlr_build37_170761_20161212.tsv.gz NA VARIANT ID CHR BP REF ALT ALT_MINOR DIRECTION EFFECT SE P MLOG10P ALT_FREQ MA_FREQ NA Yes EFO_0007986 NA NA High light scatter reticulocyte count 173480 EUR NA NA b37/hg19 0 NA BHC HRET High_Light_Scatter_Reticulocyte_Count Blood 0 #C00000 Yes Astle_et_al_2016_Lymphocyte_counts https://www.ncbi.nlm.nih.gov/pubmed/27863252 lymph_build37_171643_20161212.tsv.gz lymph_build37_171643_20161212.tsv.gz http://www.ebi.ac.uk/gwas/downloads/summary-statistics Astle_et_al_2016 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/AstleWJ_27863252_GCST004627/lymph_build37_171643_20161212.tsv.gz NA VARIANT ID CHR BP REF ALT ALT_MINOR DIRECTION EFFECT SE P MLOG10P ALT_FREQ MA_FREQ NA Yes EFO_0004587 NA NA Lymphocyte counts 173480 EUR NA NA b37/hg19 0 NA BLC LC Lymphocyte_Count Blood 0 #C00000 Yes Astle_et_al_2016_Monocyte_count https://www.ncbi.nlm.nih.gov/pubmed/27863252 mono_build37_170721_20161212.tsv.gz mono_build37_170721_20161212.tsv.gz http://www.ebi.ac.uk/gwas/downloads/summary-statistics Astle_et_al_2016 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/AstleWJ_27863252_GCST004625/mono_build37_170721_20161212.tsv.gz NA VARIANT ID CHR BP REF ALT ALT_MINOR DIRECTION EFFECT SE P MLOG10P ALT_FREQ MA_FREQ NA Yes EFO_0005091 NA NA Monocyte count 173480 EUR NA NA b37/hg19 0 NA BMC MC Monocyte_Count Blood 0 #C00000 Yes Astle_et_al_2016_Myeloid_white_cell_count https://www.ncbi.nlm.nih.gov/pubmed/27863252 myeloid_wbc_build37_169219_20161212.tsv.gz myeloid_wbc_build37_169219_20161212.tsv.gz http://www.ebi.ac.uk/gwas/downloads/summary-statistics Astle_et_al_2016 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/AstleWJ_27863252_GCST004626/myeloid_wbc_build37_169219_20161212.tsv.gz NA VARIANT ID CHR BP REF ALT ALT_MINOR DIRECTION EFFECT SE P MLOG10P ALT_FREQ MA_FREQ NA Yes EFO_0007988 NA NA Myeloid white cell count 173480 EUR NA NA b37/hg19 0 NA BYC MWBC Myeloid_White_Cell_Count Blood 0 #C00000 Yes Astle_et_al_2016_Neutrophil_count https://www.ncbi.nlm.nih.gov/pubmed/27863252 neut_build37_170702_20161212.tsv.gz neut_build37_170702_20161212.tsv.gz http://www.ebi.ac.uk/gwas/downloads/summary-statistics Astle_et_al_2016 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/AstleWJ_27863252_GCST004629/neut_build37_170702_20161212.tsv.gz NA VARIANT ID CHR BP REF ALT ALT_MINOR DIRECTION EFFECT SE P MLOG10P ALT_FREQ MA_FREQ NA Yes EFO_0004833 NA NA Neutrophil count 173480 EUR NA NA b37/hg19 0 NA BNC NC Neutrophil_Count Blood 0 #C00000 Yes Astle_et_al_2016_Platelet_count https://www.ncbi.nlm.nih.gov/pubmed/27863252 plt_build37_166066_20161212.tsv.gz plt_build37_166066_20161212.tsv.gz http://www.ebi.ac.uk/gwas/downloads/summary-statistics Astle_et_al_2016 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/AstleWJ_27863252_GCST004603/plt_build37_166066_20161212.tsv.gz NA VARIANT ID CHR BP REF ALT ALT_MINOR DIRECTION EFFECT SE P MLOG10P ALT_FREQ MA_FREQ NA Yes EFO_0004309 NA NA Platelet count 173480 EUR NA NA b37/hg19 0 NA BPC PLT Platelet_Count Blood 0 #C00000 Yes Astle_et_al_2016_Red_blood_cell_count https://www.ncbi.nlm.nih.gov/pubmed/27863252 rbc_build37_172952_20161212.tsv.gz rbc_build37_172952_20161212.tsv.gz http://www.ebi.ac.uk/gwas/downloads/summary-statistics Astle_et_al_2016 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/AstleWJ_27863252_GCST004601/rbc_build37_172952_20161212.tsv.gz NA VARIANT ID CHR BP REF ALT ALT_MINOR DIRECTION EFFECT SE P MLOG10P ALT_FREQ MA_FREQ NA Yes EFO_0004305 NA NA Red blood cell count 173480 EUR NA NA b37/hg19 0 NA BRC RBC Red_Blood_Cell_Count Blood 0 #C00000 Yes Astle_et_al_2016_Reticulocyte_count https://www.ncbi.nlm.nih.gov/pubmed/27863252 ret_build37_170641_20161212.tsv.gz ret_build37_170641_20161212.tsv.gz http://www.ebi.ac.uk/gwas/downloads/summary-statistics Astle_et_al_2016 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/AstleWJ_27863252_GCST004622/ret_build37_170641_20161212.tsv.gz NA VARIANT ID CHR BP REF ALT ALT_MINOR DIRECTION EFFECT SE P MLOG10P ALT_FREQ MA_FREQ NA Yes EFO_0007986 NA NA Reticulocyte count 173480 EUR NA NA b37/hg19 0 NA BTC RET Reticulocyte_Count Blood 0 #C00000 Yes Astle_et_al_2016_Sum_basophil_neutrophil_counts https://www.ncbi.nlm.nih.gov/pubmed/27863252 baso_neut_sum_build37_170143_20161212.tsv.gz baso_neut_sum_build37_170143_20161212.tsv.gz http://www.ebi.ac.uk/gwas/downloads/summary-statistics Astle_et_al_2016 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/AstleWJ_27863252_GCST004620/baso_neut_sum_build37_170143_20161212.tsv.gz NA VARIANT ID CHR BP REF ALT ALT_MINOR DIRECTION EFFECT SE P MLOG10P ALT_FREQ MA_FREQ NA Yes EFO_0004833 NA NA Sum basophil neutrophil counts 173480 EUR NA NA b37/hg19 0 NA BSBNC BNC Sum_Basophil_Neutrophil_Count Blood 0 #C00000 Yes Astle_et_al_2016_Sum_eosinophil_basophil_counts https://www.ncbi.nlm.nih.gov/pubmed/27863252 eo_baso_sum_build37_171771_20161212.tsv.gz eo_baso_sum_build37_171771_20161212.tsv.gz http://www.ebi.ac.uk/gwas/downloads/summary-statistics Astle_et_al_2016 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/AstleWJ_27863252_GCST004624/eo_baso_sum_build37_171771_20161212.tsv.gz NA VARIANT ID CHR BP REF ALT ALT_MINOR DIRECTION EFFECT SE P MLOG10P ALT_FREQ MA_FREQ NA Yes EFO_0004842 NA NA Sum eosinophil basophil counts 173480 EUR NA NA b37/hg19 0 NA BSEBC EBC Sum_Eosinophil_Basophil_Count Blood 0 #C00000 Yes Astle_et_al_2016_Sum_neutrophil_eosinophil_counts https://www.ncbi.nlm.nih.gov/pubmed/27863252 neut_eo_sum_build37_170384_20161212.tsv.gz neut_eo_sum_build37_170384_20161212.tsv.gz http://www.ebi.ac.uk/gwas/downloads/summary-statistics Astle_et_al_2016 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/AstleWJ_27863252_GCST004613/neut_eo_sum_build37_170384_20161212.tsv.gz NA VARIANT ID CHR BP REF ALT ALT_MINOR DIRECTION EFFECT SE P MLOG10P ALT_FREQ MA_FREQ NA Yes EFO_0004842 NA NA Sum neutrophil eosinophil counts 173480 EUR NA NA b37/hg19 0 NA BSNEC NEC Sum_Neutrophil_Eosinophil_Count Blood 0 #C00000 Yes Astle_et_al_2016_White_blood_cell_count https://www.ncbi.nlm.nih.gov/pubmed/27863252 wbc_build37_172435_20161212.tsv.gz wbc_build37_172435_20161212.tsv.gz http://www.ebi.ac.uk/gwas/downloads/summary-statistics Astle_et_al_2016 ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/AstleWJ_27863252_GCST004610/wbc_build37_172435_20161212.tsv.gz NA VARIANT ID CHR BP REF ALT ALT_MINOR DIRECTION EFFECT SE P MLOG10P ALT_FREQ MA_FREQ NA Yes EFO_0004308 NA NA White blood cell count 173480 EUR NA NA b37/hg19 0 NA BWC WBC White_Blood_Cell_Count Blood 0 #C00000 Yes CARDIoGRAM_C4D_CAD_ADDITIVE http://www.ncbi.nlm.nih.gov/pubmed/26343387 cad.add.160614.website.txt.gz cad.additive.Oct2015.pub.zip http://www.cardiogramplusc4d.org/downloads/ CARDIoGRAM_C4D ftp://ftp.sanger.ac.uk/pub/cardiogramplusc4d/2015/cad.additive.Oct2015.pub.zip NA NA NA Yes EFO_0000378 HP:0001677 NA Coronary Artery Disease (additive model) 184305 EUR:SAS:EAS:AFR:AMR 10/6/2015 effect_allele b36/hg18 1 60801 CAD CAD Coronary_Artery_Disease Cardiometabolic 0 #004000 Yes CKDGen_Chronic_Kidney_Disease http://www.ncbi.nlm.nih.gov/pubmed/24029420 formatted_round3meta_CKD_overall_IV_2GC_b36_MAFget005_Nget50_20120725_b37.csv.gz formatted_round3meta_CKD_overall_IV_2GC_b36_MAFget005_Nget50_20120725_b37.csv https://fox.nhlbi.nih.gov/CKDGen/ CKDGen https://fox.nhlbi.nih.gov/CKDGen/formatted_round3meta_CKD_overall_IV_2GC_b36_MAFget005_Nget50_20120725_b37.csv.gz NA NA NA Yes NA NA NA Chronic Kidney Disease 70484 EUR NA NA b36/hg18 0 NA CKD CKD Chronic_Kidney_Disease Immune 1 #40A0A0 Yes CNCR_Insomnia_all https://www.ncbi.nlm.nih.gov/pubmed/28604731 Hammerschlag_NatGenet2017_insomnia_sumstats-full_090617.txt.gz Hammerschlag_NatGenet2017_insomnia_sumstats-full_090617.txt.gz https://ctg.cncr.nl/ CNCR-CTG https://ctg.cncr.nl/documents/p1651/Hammerschlag_NatGenet2017_insomnia_sumstats-full_090617.txt.gz NA SNP UNIQUE_ID CHR POS A1 A2 EAF OR BETA SE P N_analyzed N_cases N_controls INFO NA Yes EFO_0004698 NA NA Insomnia in both sexes 113006 NA 06/12/2017 A1 b37/hg19 1 32384 NSL INSOMN Insomnia_In_Both_Sexes Psychiatric-neurologic 0 #0000A0 Yes DIAGRAM_T2D_TRANS_ETHNIC http://www.ncbi.nlm.nih.gov/pubmed/22885922 diagram.mega-meta.txt.gz TransEthnic_T2D_GWAS.MegaMeta.2014OCT16.zip http://diagram-consortium.org/downloads.html DIAGRAM NA NA NA NA Yes EFO_0001360 HP:0005978 NA Type 2 Diabetes 149461 EUR:EAS:SAS 10/16/2014 RISK_ALLELE b36/hg18 1 34840 T2D T2D Type_2_Diabetes Cardiometabolic 1 #004000 Yes EAGLE_Eczema NA EAGLE_AD_GWAS_results_2015.txt.gz EAGLE_AD_GWAS_results_2015.txt https://data.bris.ac.uk/data/dataset/28uchsdpmub118uex26ylacqm EAGLE http://data.bris.ac.uk/datasets/28uchsdpmub118uex26ylacqm/EAGLE_AD_GWAS_results_2015.txt.gz NA NA NA Yes NA HP:0000964 NA Eczema 116863 EUR NA NA b37/hg19 1 21399 ECZ ECZ Eczema Allergy 0 #FFFF00 Yes EGG_BL http://www.ncbi.nlm.nih.gov/pubmed/25281659 EGG-GWAS-BL.txt.gz EGG-GWAS-BL.txt.gz http://egg-consortium.org/ EGG http://egg-consortium.org/downloads/EGG-GWAS-BL.txt.gz Check page for acknowledgement NA NA Yes EFO_0006784 NA NA Birth Length 28459 EUR 10/10/2014 EA b36/hg18 0 NA EBL BL Birth_Length Anthropometric 1 #404040 Yes EGG_BMI_HapMapImputed http://www.ncbi.nlm.nih.gov/pubmed/26604143 EGG_BMI_HapMap_DISCOVERY.txt.gz EGG_BMI_HapMap_DISCOVERY.txt.gz http://egg-consortium.org/ EGG http://egg-consortium.org/downloads/EGG_BMI_HapMap_DISCOVERY.txt.gz NA NA NA Yes EFO_0004340 NA NA Body Mass Index Standard Deviation Score 35668 NA 1/8/2016 EA b36/hg18 0 NA EBMI BMI_SDS BMI_Childhood Anthropometric 1 #404040 Yes EGG_BW3_EUR https://www.ncbi.nlm.nih.gov/pubmed/27680694 BW3_EUR_summary_stats.txt.gz BW3_EUR_summary_stats.txt.gz http://egg-consortium.org/ EGG http://mccarthy.well.ox.ac.uk/publications/2016/EggBirthWeight_Nature/BW3_EUR_summary_stats.txt.gz NA NA Yes Yes EFO_0004344 NA NA Birth Weight 143677 EUR 11/30/2016 NA b37/hg19 0 NA EBW BW Birth_Weight Anthropometric 0 #404040 Yes EGG_Pubertal_growth_10F http://www.ncbi.nlm.nih.gov/pubmed/23449627 Pubertal_growth_10F.txt.gz Pubertal_growth_10F.txt.gz http://egg-consortium.org/ EGG http://egg-consortium.org/downloads/Pubertal_growth_10F.txt.gz NA NA NA Yes EFO_0004339 NA NA Height Standard Deviation Score (Females, 10 years old) 6974 EUR 2/24/2015 EA b36/hg18 0 NA EPF PHF Pubertal_Height_Female Anthropometric 1 #404040 Yes EGG_Pubertal_growth_12M http://www.ncbi.nlm.nih.gov/pubmed/23449627 Pubertal_growth_12M.txt.gz Pubertal_growth_12M.txt.gz http://egg-consortium.org/ EGG http://egg-consortium.org/downloads/Pubertal_growth_12M.txt.gz NA NA NA Yes EFO_0004339 NA NA Height Standard Deviation Score (Males, 12 years old) 6986 EUR 2/24/2015 EA b36/hg18 0 NA EPM PHM Pubertal_Height_Male Anthropometric 1 #404040 Yes ENIGMA_Intracraneal_Volume https://www.ncbi.nlm.nih.gov/pubmed/25607358 ENIGMA2_ICV_Combined_GenomeControlled_Jan23.tbl.gz ENIGMA2_ICV_Combined_GenomeControlled_Jan23.tbl.gz http://enigma.usc.edu/ ENIGMA http://enigma.ini.usc.edu/wp-content/uploads/E2_EVIS/ENIGMA2_ICV_Combined_GenomeControlled_Jan23.tbl.gz NA RSID CHR_BP_hg19b37 Effect_Allele Non_Effect_Allele Freq_European_1000Genomes Effect_Beta StdErr Pvalue N NA Yes EFO_0004886 NA NA Intracraneal Volume 30717 EUR NA NA b37/hg19 0 NA INV ICV Intracraneal_Volume Anthropometric 0 #404040 Yes GABRIEL_Asthma http://www.ncbi.nlm.nih.gov/pubmed/17611496 gabriel_results.zip gabriel_asthma_meta-analysis_36studies_format_repository_NEJM.txt http://www.cng.fr/gabriel/results.html Gabriel https://beaune.cng.fr/gabriel/gabriel_results.zip NA NA NA Yes EFO_0000270 NA NA Asthma 26475 EUR NA NA b36/hg18 1 10365 GAS ATH Asthma Allergy 1 #FFFF00 Yes GEFOS_Forearm http://www.ncbi.nlm.nih.gov/pubmed/26367794 fa2stu.MAF0_.005.pos_.out_.gz fa2stu.MAF0_.005.pos_.out_.gz http://www.gefos.org/?q=content/data-release-2015 GEFOS http://www.gefos.org/sites/default/files/fa2stu.MAF0_.005.pos_.out_.gz NA NA Yes Yes EFO_0003923 NA NA Bone Mineral Density (Forearm) 49988 EUR 10/22/2015 reference_allele b37/hg19 0 NA GFA BMD Bone_Mineral_Density Anthropometric 0 #404040 Yes GIANT_2017_BMI_Active_EUR NA BMI.ACTIVE.ALL.European.txt.gz BMI.ACTIVE.ALL.European.txt.gz http://portals.broadinstitute.org/collaboration/giant GIANT http://portals.broadinstitute.org/collaboration/giant/images/e/e9/BMI.ACTIVE.ALL.European.txt.gz NA rsid Chromosome Position_hg19 Effect_allele EAF_HapmapCEU Other_allele Sample_size Effect Stderr Pvalue HetIsq NA No EFO_0004340 NA NA BMI for individuals defined as active, only European cohorts 180423 EUR NA NA b37/hg19 0 NA GBMIA BMIA BMI_Active_Inds Anthropometric 1 #404040 Yes GIANT_2015_BMI_EUR http://www.ncbi.nlm.nih.gov/pubmed/25673413 SNP_gwas_mc_merge_nogc.tbl.uniq.gz SNP_gwas_mc_merge_nogc.tbl.uniq.gz http://www.broadinstitute.org/collaboration/giant/index.php/GIANT_consortium_data_files GIANT http://www.broadinstitute.org/collaboration/giant/images/1/15/SNP_gwas_mc_merge_nogc.tbl.uniq.gz BMI NA NA NA EFO_0004340 NA NA Body Mass Index 322154 EUR 3/8/2015 A1 b37/hg19 0 NA GBMI BMI BMI_EUR Anthropometric 1 #404040 Yes GIANT_HEIGHT http://www.ncbi.nlm.nih.gov/pubmed/25282103 GIANT_HEIGHT_Wood_et_al_2014_publicrelease_HapMapCeuFreq.txt.gz NA http://www.broadinstitute.org/collaboration/giant/index.php/GIANT_consortium_data_files GIANT https://www.broadinstitute.org/collaboration/giant/images/0/01/GIANT_HEIGHT_Wood_et_al_2014_publicrelease_HapMapCeuFreq.txt.gz NA NA NA Yes EFO_0004339 NA NA Height 253288 EUR 10/6/2014 Allele1 b37/hg19 0 NA GHE HEIGHT Height Anthropometric 0 #404040 Yes GIANT_HIP_Combined_EUR http://www.ncbi.nlm.nih.gov/pubmed/25673412 GIANT_2015_HIP_COMBINED_EUR.txt.gz GIANT_2015_HIP_COMBINED_EUR.txt.gz http://www.broadinstitute.org/collaboration/giant/index.php/GIANT_consortium_data_files GIANT http://www.broadinstitute.org/collaboration/giant/images/e/e4/GIANT_2015_HIP_COMBINED_EUR.txt.gz NA NA NA NA EFO_0005093 NA NA Hip Circumference 142762 EUR 2/12/2015 Allele1 b37/hg19 0 NA GHI HIP Hip_Circumference_EUR Anthropometric 1 #404040 Yes GIANT_WC_Combined_EUR http://www.ncbi.nlm.nih.gov/pubmed/25673412 GIANT_2015_WC_COMBINED_EUR.txt.gz GIANT_2015_WC_COMBINED_EUR.txt.gz http://www.broadinstitute.org/collaboration/giant/index.php/GIANT_consortium_data_files GIANT http://www.broadinstitute.org/collaboration/giant/images/5/57/GIANT_2015_WC_COMBINED_EUR.txt.gz NA NA NA NA EFO_0004342 NA NA Waist Circumference 232101 EUR 2/12/2015 Allele1 b37/hg19 0 NA GWC WAIST Waist_Circumference_EUR Anthropometric 1 #404040 Yes GIANT_WHR_Combined_EUR http://www.ncbi.nlm.nih.gov/pubmed/25673412 GIANT_2015_WHR_COMBINED_EUR.txt.gz GIANT_2015_WHR_COMBINED_EUR.txt.gz http://www.broadinstitute.org/collaboration/giant/index.php/GIANT_consortium_data_files GIANT http://www.broadinstitute.org/collaboration/giant/images/5/54/GIANT_2015_WHR_COMBINED_EUR.txt.gz Waist NA NA NA EFO_0004343 NA NA Waist-to-Hip Ratio 212248 EUR 2/12/2015 Allele1 b37/hg19 0 NA GWH WHR Waist-to-Hip_Ratio_EUR Anthropometric 1 #404040 Yes GLGC_Mc_HDL http://www.ncbi.nlm.nih.gov/pubmed/24097068 jointGwasMc_HDL.txt.gz jointGwasMc_HDL.txt.gz http://csg.sph.umich.edu//abecasis/public/lipids2013/ GLGC http://csg.sph.umich.edu/abecasis/public/lipids2013/jointGwasMc_HDL.txt.gz both hg18 and hg19 available NA NA Yes CHEBI_47775 NA NA High-density Lipoprotein Cholesterol 188578 EUR 11/26/2013 A1 b37/hg19 0 NA GHDL HDL HDL_Cholesterol Cardiometabolic 1 #004000 Yes GLGC_Mc_LDL http://www.ncbi.nlm.nih.gov/pubmed/24097068 jointGwasMc_LDL.txt.gz jointGwasMc_LDL.txt.gz http://csg.sph.umich.edu//abecasis/public/lipids2013/ GLGC http://csg.sph.umich.edu/abecasis/public/lipids2013/jointGwasMc_LDL.txt.gz both hg18 and hg19 available NA NA Yes EFO_0004195 NA NA Low-density Lipoprotein Cholesterol 188578 EUR 11/26/2013 A1 b37/hg19 0 NA GLDL LDL LDL_Cholesterol Cardiometabolic 1 #004000 Yes GLGC_Mc_TG http://www.ncbi.nlm.nih.gov/pubmed/24097068 jointGwasMc_TG.txt.gz jointGwasMc_TG.txt.gz http://csg.sph.umich.edu//abecasis/public/lipids2013/ GLGC http://csg.sph.umich.edu/abecasis/public/lipids2013/jointGwasMc_TG.txt.gz both hg18 and hg19 available NA NA Yes EFO_0004530 NA NA Triglycerids 188578 EUR 11/26/2013 A1 b37/hg19 0 NA GTG TRIG Triglycerides Cardiometabolic 1 #004000 Yes GPC-NEO-NEUROTICISM http://www.ncbi.nlm.nih.gov/pubmed/21173776 GPC-1.NEO-NEUROTICISM.full.txt.gz GPC-1.BigFiveNEO.zip http://www.tweelingenregister.org/GPC/ GPC https://www.dropbox.com/s/df3bifmk238ks2y/GPC-1.BigFiveNEO.zip?dl=0 NA NA NA Yes NA NA NA Five Factor Model Neuroticism 17375 EUR 1/1/2012 A1 b36/hg18 0 NA GNN NEUROT Neuroticism Psychiatric-neurologic 1 #0000A0 Yes HRGene_HeartRate https://www.ncbi.nlm.nih.gov/pubmed/23583979 META_STAGE1_GWASHR_SUMSTATS.txt META_STAGE1_GWASHR_SUMSTATS.txt https://walker05.u.hpc.mssm.edu/ HRGene http://walker05.u.hpc.mssm.edu/META_STAGE1_GWASHR_SUMSTATS.txt NA rsid CHR POS EFFECT_ALLELE OTHER_ALLELE EAF beta SE N_TOTAL P_VALUE P_VALUE_GCADJ NA Yes EFO_0004326 NA NA Heart rate 85787 EUR NA NA b36/hg18 0 NA HHR HR Heart_Rate Cardiometabolic 2 #004000 Yes IBD.EUR.Crohns_Disease http://www.ncbi.nlm.nih.gov/pubmed/26192919 EUR.CD.gwas.assoc.gz EUR.CD.gwas.assoc.gz http://www.ibdgenetics.org/ IBD ftp://ftp.sanger.ac.uk/pub/consortia/ibdgenetics/iibdgc-trans-ancestry-summary-stats.tar NA NA NA Yes EFO_0003767 HP:0002037 NA Crohn's Disease 20833 EUR 8/19/2015 NA b37/hg19 1 5956 ICD CD Crohns_Disease Immune 0 #40A0A0 Yes IBD.EUR.Inflammatory_Bowel_Disease http://www.ncbi.nlm.nih.gov/pubmed/26192919 EUR.IBD.gwas.assoc.gz EUR.IBD.gwas.assoc.gz http://www.ibdgenetics.org/ IBD ftp://ftp.sanger.ac.uk/pub/consortia/ibdgenetics/iibdgc-trans-ancestry-summary-stats.tar NA NA NA Yes EFO_0003767 HP:0002037 NA Inflammatory Bowel Disease 34652 EUR 8/19/2015 NA b37/hg19 1 12882 IBD IBD Inflammatory_Bowel_Disease Immune 0 #40A0A0 Yes IBD.EUR.Ulcerative_Colitis http://www.ncbi.nlm.nih.gov/pubmed/26192919 EUR.UC.gwas.assoc.gz EUR.UC.gwas.assoc.gz http://www.ibdgenetics.org/ IBD ftp://ftp.sanger.ac.uk/pub/consortia/ibdgenetics/iibdgc-trans-ancestry-summary-stats.tar NA NA NA Yes EFO_0003767 HP:0002037 NA Ulcerative Colitis 27432 EUR 8/19/2015 NA b37/hg19 1 6968 IUC UC Ulcerative_Colitis Immune 0 #40A0A0 Yes IGAP_Alzheimer http://www.ncbi.nlm.nih.gov/pubmed/24162737 IGAP_stage_1.txt.gz IGAP_summary_statistics.zip http://web.pasteur-lille.fr/en/recherche/u744/igap/igap_download.php IGAP http://web.pasteur-lille.fr/en/recherche/u744/igap/igap_download.php NA NA NA Yes EFO_0000249 HP:0002511 NA Alzheimer 54162 EUR 7/1/2014 Effect_allele b37/hg19 1 17008 IALZ AD Alzheimers_Disease Psychiatric-neurologic 0 #0000A0 Yes ILAE_Genetic_generalised_epilepsy http://thelancet.com/journals/laneur/article/PIIS1474-4422(14)70171-1/fulltext ILAE_GGE_5.8.14.txt.gz ILAE_GGE_5.8.14.txt.gz http://www.epigad.org/gwas_ilae2014/ ILAE http://www.epigad.org/gwas_ilae2014/ILAE_GGE_5.8.14.txt.gz NA MarkerName Allele1 Allele2 Weight Zscore P-value Direction HetISq HetChiSq HetDf HetPVa Chr Pos NA Yes NA NA NA Genetic Generalised Epilepsy 28763 Mixed 8/5/2014 NA b37/hg19 1 2606 IGE EPI Epilepsy Psychiatric-neurologic 2 #0000A0 Yes IMMUNOBASE_Celiac_disease_hg19 http://www.ncbi.nlm.nih.gov/pubmed/20190752 hg19_gwas_cel_dubois_4_19_1.tab hg19_gwas_cel_dubois_4_19_1.tab https://www.immunobase.org/downloads/protected_data/GWAS_Data/ IMMUNOBASE https://www.immunobase.org/downloads/protected_data/GWAS_Data/hg19_gwas_cel_dubois_4_19_1.tab NA NA NA Yes EFO_0001060 NA NA Celiac Disease 15283 EUR NA NA b37/hg19 1 4533 ICEL CEL Celiac_Disease Cardiometabolic 1 #004000 Yes IMMUNOBASE_Multiple_sclerosis_hg19 http://www.ncbi.nlm.nih.gov/pubmed/21833088 hg19_gwas_ms_imsgc_4_19_2.tab hg19_gwas_ms_imsgc_4_19_2.tab https://www.immunobase.org/downloads/protected_data/GWAS_Data/ IMMUNOBASE https://www.immunobase.org/downloads/protected_data/GWAS_Data/hg19_gwas_ms_imsgc_4_19_2.tab NA NA NA Yes EFO_0003885 NA NA Multiple Sclerosis 27098 EUR NA NA b37/hg19 1 9722 IMC MS Multiple_Sclerosis Cardiometabolic 1 #004000 Yes IMMUNOBASE_Systemic_lupus_erythematosus_hg19 http://www.ncbi.nlm.nih.gov/pubmed/26502338 hg19_gwas_sle_bentham_4_20_0.tab hg19_gwas_sle_bentham_4_20_0.tab https://www.immunobase.org/downloads/protected_data/GWAS_Data/ IMMUNOBASE https://www.immunobase.org/downloads/protected_data/GWAS_Data/hg19_gwas_sle_bentham_4_20_0.tab NA NA NA Yes EFO_0002690 NA NA Systemic Lupus Erythematosus 23210 EUR NA NA b37/hg19 1 7219 ISL SLE Systemic_Lupus_Erythematosus Immune 0 #40A0A0 Yes ISGC_Malik_2016_METASTROKE_all_strokes https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4818561/ metastroke.all.chr.bp metastroke.all.chr.bp http://cerebrovascularportal.org ISGC https://personal.broadinstitute.org/mvon/4818561.Malik.2016.zip inferred from rsid position MarkerName Allele1 Allele2 Freq1 FreqSE Effect StdErr P.value Direction HetISq HetChiSq HetDf HetPVal chromosome position NA Yes EFO_0000712 NA NA All strokes 29633 NA NA NA b36/hg18 1 10307 IMS STROKE Stroke Cardiometabolic 1 #004000 Yes Jones_et_al_2016_Chronotype https://www.ncbi.nlm.nih.gov/pubmed/27494321 Chronotype_SIN_BOLT.output_plus.metrics_MAF0.001_HWE1E-5_qual0.4.txt.gz Chronotype_SIN_BOLT.output_plus.metrics_MAF0.001_HWE1E-5_qual0.4.txt http://www.t2diabetesgenes.org/data/ Jones_et_al_2016 http://www.t2diabetesgenes.org/datasets/Chronotype_SIN_BOLT.output_plus.metrics_MAF0.001_HWE1E-5_qual0.4.txt.gz NA NA NA Yes NA NA NA Chronotype 128266 EUR 08/05/2016 NA b37/hg19 0 NA JCH CHRONO Chronotype Psychiatric-neurologic 0 #0000A0 Yes Jones_et_al_2016_SleepDuration https://www.ncbi.nlm.nih.gov/pubmed/27494321 Sleep_Duration_SIN_BOLT.output_plus.metrics_MAF0.001_HWE1E-5_qual0.4.txt.gz Sleep_Duration_SIN_BOLT.output_plus.metrics_MAF0.001_HWE1E-5_qual0.4.txt http://www.t2diabetesgenes.org/data/ Jones_et_al_2016 http://www.t2diabetesgenes.org/datasets/Sleep_Duration_SIN_BOLT.output_plus.metrics_MAF0.001_HWE1E-5_qual0.4.txt.gz NA NA NA Yes EFO_0005271 NA NA Sleep Duration 128266 EUR 08/05/2016 NA b37/hg19 0 NA JSD SLEEP Sleep_Duration Psychiatric-neurologic 0 #0000A0 Yes MAGIC_FastingGlucose http://www.ncbi.nlm.nih.gov/pubmed/20081858 MAGIC_FastingGlucose.txt MAGIC_FastingGlucose.txt http://www.magicinvestigators.org/downloads/ MAGIC ftp://ftp.sanger.ac.uk/pub/magic/MAGIC_FastingGlucose.txt inferred from supplementary file in paper NCBI 35 NA NA NA EFO_0004465 NA NA Fasting Glucose 46186 EUR 8/8/2011 effect_allele b35/hg17 0 NA MFG FG Fasting_Glucose Cardiometabolic 0 #004000 Yes MAGIC_ln_FastingInsulin http://www.ncbi.nlm.nih.gov/pubmed/20081858 MAGIC_ln_FastingInsulin.txt MAGIC_ln_FastingInsulin.txt http://www.magicinvestigators.org/downloads/ MAGIC ftp://ftp.sanger.ac.uk/pub/magic/MAGIC_ln_FastingInsulin.txt inferred from supplementary file in paper NCBI 35 NA NA NA EFO_0004466 NA NA Fasting Insulin 38238 EUR 8/8/2011 effect_allele b35/hg17 0 NA MFI INSUL Fasting_Insulin Cardiometabolic 0 #004000 Yes MAGNETIC_CH2.DB.ratio http://www.ncbi.nlm.nih.gov/pubmed/27005778 Summary_statistics_MAGNETIC_CH2.DB.ratio.txt.gz Summary_statistics_MAGNETIC_CH2.DB.ratio.txt http://www.computationalmedicine.fi/data#NMR_GWAS MAGNETIC https://computationalmedicine.blob.core.windows.net/nmrgwas/Summary_statistics_MAGNETIC_CH2.DB.ratio.txt.gz?se=2016-06-23&sr=b&sp=r&sig=xT7LfiohtVu8z7L8W6oyKo4eudsOoyrAbCc7CMo6m5s%3D&sv=2014-02-14 NA NA NA Yes NA NA NA Average number of methylene groups per a double bond 24154 EUR NA NA b36/hg18 0 NA MCD CH2 CH2DB_NMR Cardiometabolic 0 #004000 Yes MAGNETIC_HDL.C http://www.ncbi.nlm.nih.gov/pubmed/27005778 Summary_statistics_MAGNETIC_HDL.C.txt.gz Summary_statistics_MAGNETIC_HDL.C.txt http://www.computationalmedicine.fi/data#NMR_GWAS MAGNETIC https://computationalmedicine.blob.core.windows.net/nmrgwas/Summary_statistics_MAGNETIC_HDL.C.txt.gz?se=2016-06-23&sr=b&sp=r&sig=r18jfrRnXNLMgnJpf1TchLj6PeRYAcHNvU5OS3wT%2BmQ%3D&sv=2014-02-14 NA NA NA NA NA NA NA Total cholesterol in HDL 19270 EUR NA NA b36/hg18 0 NA MHDL HDLC HDL_Cholesterol_NMR Cardiometabolic 0 #004000 Yes MAGNETIC_IDL.TG http://www.ncbi.nlm.nih.gov/pubmed/27005778 Summary_statistics_MAGNETIC_IDL.TG.txt.gz Summary_statistics_MAGNETIC_IDL.TG.txt http://www.computationalmedicine.fi/data#NMR_GWAS MAGNETIC https://computationalmedicine.blob.core.windows.net/nmrgwas/Summary_statistics_MAGNETIC_IDL.TG.txt.gz?se=2016-06-23&sr=b&sp=r&sig=9ZfTtoW4MfZgyHl2XR89EaKa6lj%2Fjb3s9QHxMfMu9vM%3D&sv=2014-02-14 NA NA NA NA NA NA NA Triglycerides in IDL 21559 EUR NA NA b36/hg18 0 NA MIDL IDL Triglycerides_NMR Cardiometabolic 0 #004000 Yes MAGNETIC_LDL.C http://www.ncbi.nlm.nih.gov/pubmed/27005778 Summary_statistics_MAGNETIC_LDL.C.txt.gz Summary_statistics_MAGNETIC_LDL.C.txt http://www.computationalmedicine.fi/data#NMR_GWAS MAGNETIC https://computationalmedicine.blob.core.windows.net/nmrgwas/Summary_statistics_MAGNETIC_LDL.C.txt.gz?se=2016-06-23&sr=b&sp=r&sig=VIFr%2F%2B6mTZpVFAoQeFeoIW5pn2RQeQ2MlLo9KocXAWY%3D&sv=2014-02-14 NA NA NA NA NA NA NA Total cholesterol in LDL 13527 EUR NA NA b36/hg18 0 NA MLDL LDLC LDL_Cholesterol_NMR Cardiometabolic 0 #004000 Yes PGC_ADHD_EUR_2017 NA adhd_eur_jun2017.gz adhd_eur_jun2017.gz https://www.med.unc.edu/ PGC https://www.med.unc.edu/pgc/results-and-downloads/data-use-agreement-forms/copy_of_ADHDEA2017_data_download_agreement/resolveuid/d43df28b249d4717b6f127e7ab6286c7 NA CHR SNP BP A1 A2 INFO OR SE P NA No EFO_0003888 NA NA Attention deficit hyperactivity disorder - EUR 53293 EUR NA NA b37/hg19 1 19099 PADHD ADHD Attention_Deficit_Hyperactivity_Disorder Psychiatric-neurologic 0 #0000A0 Yes PGC_ASD_2017_CEU https://molecularautism.biomedcentral.com/articles/10.1186/s13229-017-0137-9 daner_AUT_meta14_CEU_all.hg19.Mar2016_info_0.60_maf_0.05_release_Jun2017.tsv.gz daner_AUT_meta14_CEU_all.hg19.Mar2016_info_0.60_maf_0.05_release_Jun2017.tsv.gz https://www.med.unc.edu/ PGC https://www.med.unc.edu/pgc/results-and-downloads/data-use-agreement-forms/copy_of_ASD2017_data_download_agreement/resolveuid/7c732708f5d44b89944ac145831bca5b NA NO HEADER IN ORIGINAL FILE NA No EFO_0003756 NA NA Autism spectrum disorder - CEU 15954 EUR NA a1 b37/hg19 1 7387 PASD ASD Autism_Spectrum_Disorder Psychiatric-neurologic 2 #0000A0 Yes pgc.scz2 http://www.ncbi.nlm.nih.gov/pubmed/25056061 scz2.snp.results.txt.gz scz2.snp.results.txt.gz https://www.med.unc.edu/pgc/downloads PGC https://www.med.unc.edu/pgc/files/resultfiles/scz2.snp.results.txt.gz NA NA NA Yes EFO_0000692 HP:0100753 NA Schizophrenia 150064 EUR:EAS 8/12/2015 NA b37/hg19 1 36989 PSCZ SCZ Schizophrenia Psychiatric-neurologic 0 #0000A0 Yes RA_OKADA_TRANS_ETHNIC http://www.ncbi.nlm.nih.gov/pubmed/24390342 RA_GWASmeta_TransEthnic_v2.txt.gz RA_GWASmeta_TransEthnic_v2.txt.gz http://plaza.umin.ac.jp/yokada/datasource/software.htm RA_OKADA http://plaza.umin.ac.jp/yokada/datasource/files/GWASMetaResults/RA_GWASmeta_TransEthnic_v2.txt.gz NA NA NA Yes EFO_0000685 HP:0001370 NA Rheumatoid Arthritis 80799 EUR:EAS 11/8/2013 NA b37/hg19 1 19234 ORA RA Rheumatoid_Arthritis Immune 0 #40A0A0 Yes SSGAC_Depressive_Symptoms http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.3552.html#access DS_Full.txt.gz DS_Full.txt.gz https://www.thessgac.org SSGAC http://ssgac.org/documents/DS_Full.txt.gz NA MarkerName CHR POS A1 A2 EAF Beta SE Pval NA Yes EFO_0007006 NA NA Depressive Symptoms 180866 NA NA A1 b36/hg18 0 NA SDS DEPR Depressive_Symptoms Psychiatric-neurologic 0 #0000A0 Yes SSGAC_Education_Years_Pooled http://www.nature.com/nature/journal/vaop/ncurrent/full/nature17671.html EduYears_Main.txt.gz EduYears_Main.txt.gz https://www.thessgac.org SSGAC http://ssgac.org/documents/EduYears_Main.txt.gz NA MarkerName CHR POS A1 A2 EAF Beta SE Pval NA Yes NA NA NA Education years (Discovery and replication cohorts, genders pooled) 293723 NA NA NA b37/hg19 0 NA SEY EDU Education_Years Psychiatric-neurologic 0 #0000A0 Yes TAGC_Asthma_EUR https://www.ncbi.nlm.nih.gov/pubmed/29273806 TAGC_Multiancestry_and_European-Ancestry_Meta-analyses_Results.tsv TAGC_meta-analyses_results_for_asthma_risk.zip https://www.ebi.ac.uk/gwas/downloads TAGC ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/DemenaisF_29273806_GCST005212/TAGC_meta-analyses_results_for_asthma_risk.zip NA chr rsid position reference_allele alternate_allele Multiancestry_beta_fix Multiancestry_se_fix Multiancestry_pval_fix Multiancestry_beta_rand Multiancestry_se_ran NA NA EFO_0000270 HP:0002099 NA Asthma 127669 EUR 12/22/2017 alternate_allele b37/hg19 1 19954 TAE ATH_TAGC Asthma_TAGC_EUR Allergy 2 #FFFF00 Yes ICBP_SystolicPressure https://www.ncbi.nlm.nih.gov/pubmed/21909115 ICBP_systolic_pressure.txt.gz phs000585.pha003588.txt http://www.georgehretlab.org/icbp_088023401234-9812599.html ICBP ftp://ftp.ncbi.nlm.nih.gov/dbgap/studies/phs000585/analyses/phs000585.pha003588.txt.gz Original file was changed NA NA Yes EFO:0006335 NA NA Systolic Blood Pressure 203056 EUR 09/11/2011 Coded allele b37/hg19 0 NA ISP SBP Systolic_Blood_Pressure Cardiometabolic 1 #004000 Yes ICBP_DiastolicPressure https://www.ncbi.nlm.nih.gov/pubmed/21909115 ICBP_diastolic_pressure.txt.gz phs000585.pha003589.txt http://www.georgehretlab.org/icbp_088023401234-9812599.html ICBP ftp://ftp.ncbi.nlm.nih.gov/dbgap/studies/phs000585/analyses/phs000585.pha003589.txt.gz Original file was changed NA NA Yes EFO:0006336 NA NA Diastolic Blood Pressure 203056 EUR 09/11/2011 Coded allele b37/hg19 0 NA IDP DBP Diastolic_Blood_Pressure Cardiometabolic 1 #004000 Yes BCAC_ER_negative_BreastCancer_EUR https://www.ncbi.nlm.nih.gov/pubmed/25890600 icogs_bcac_public_results_euro_ERNEG.txt.gz icogs_bcac_public_results_euro.txt.gz http://bcac.ccge.medschl.cam.ac.uk/ BCAC http://bcac.ccge.medschl.cam.ac.uk/bcacdata/icogs-complete-summary-results/ NA var_name chr position_b37 a0 a1 phase3_1kg_id phase1_1kg_id bcac_icogs1_effect_allele bcac_icogs1_european_controls_eaf bcac_icogs1_european_r2 bcac_icogs1_risk_beta bcac_icogs1_risk_se bcac_icogs1_OR bcac_icogs1_risk_chi2 bcac_icogs1_risk_P1df bcac_icogs1_erneg_beta bcac_icogs1_erneg_se bcac_icogs1_erneg_OR bcac_icogs1_erneg_chi2 bcac_icogs1_erneg_P1df bcac_icogs1_erpos_beta bcac_icogs1_erpos_se bcac_icogs1_erpos_OR bcac_icogs1_erpos_chi2 bcac_icogs1_erpos_P1df bcac_icogs_survival_effect_allele bcac_icogs_survival_eaf bcac_icogs_survival_se bcac_icogs_survival_HR bcac_icogs_survival_chi2 bcac_icogs_survival_P1df bcac_icogs_survival_erneg_effect_allele bcac_icogs_survival_erneg_eaf bcac_icogs_survival_erneg_se bcac_icogs_survival_erneg_HR bcac_icogs_survival_erneg_chi2 bcac_icogs_survival_erneg_P1df bcac_icogs_survival_erpos_effect_allele bcac_icogs_survival_erpos_eaf bcac_icogs_survival_erpos_se bcac_icogs_survival_erpos_HR bcac_icogs_survival_erpos_chi2 bcac_icogs_survival_erpos_P1df bcac_icogs_gt_effect_allele bcac_icogs_gt_freq_controls bcac_icogs_gt_beta bcac_icogs_gt_se bcac_icogs_gt_OR bcac_icogs_gt_chi2 bcac_icogs_gt_P1df bcac_icogs_gt_erneg_beta bcac_icogs_gt_erneg_se bcac_icogs_gt_erneg_OR bcac_icogs_gt_erneg_chi2 bcac_icogs_gt_erneg_P1df bcac_icogs_gt_erpos_beta bcac_icogs_gt_erpos_se bcac_icogs_gt_erpos_OR bcac_icogs_gt_erpos_chi2 bcac_icogs_gt_erpos_P1df NA Yes EFO_10006450 NA NA Estrogen-receptor-negative breast cancer in Europeans, imputed genotype 120000 EUR NA NA b37/hg19 1 31000 BCN ERNBC ER-negative_Breast_Cancer Cancer 0 #A0A0A0 Yes BCAC_ER_positive_BreastCancer_EUR https://www.ncbi.nlm.nih.gov/pubmed/25890600 icogs_bcac_public_results_euro_ERPOS.txt.gz icogs_bcac_public_results_euro.txt.gz http://bcac.ccge.medschl.cam.ac.uk/ BCAC http://bcac.ccge.medschl.cam.ac.uk/bcacdata/icogs-complete-summary-results/ NA var_name chr position_b37 a0 a1 phase3_1kg_id phase1_1kg_id bcac_icogs1_effect_allele bcac_icogs1_european_controls_eaf bcac_icogs1_european_r2 bcac_icogs1_risk_beta bcac_icogs1_risk_se bcac_icogs1_OR bcac_icogs1_risk_chi2 bcac_icogs1_risk_P1df bcac_icogs1_erneg_beta bcac_icogs1_erneg_se bcac_icogs1_erneg_OR bcac_icogs1_erneg_chi2 bcac_icogs1_erneg_P1df bcac_icogs1_erpos_beta bcac_icogs1_erpos_se bcac_icogs1_erpos_OR bcac_icogs1_erpos_chi2 bcac_icogs1_erpos_P1df bcac_icogs_survival_effect_allele bcac_icogs_survival_eaf bcac_icogs_survival_se bcac_icogs_survival_HR bcac_icogs_survival_chi2 bcac_icogs_survival_P1df bcac_icogs_survival_erneg_effect_allele bcac_icogs_survival_erneg_eaf bcac_icogs_survival_erneg_se bcac_icogs_survival_erneg_HR bcac_icogs_survival_erneg_chi2 bcac_icogs_survival_erneg_P1df bcac_icogs_survival_erpos_effect_allele bcac_icogs_survival_erpos_eaf bcac_icogs_survival_erpos_se bcac_icogs_survival_erpos_HR bcac_icogs_survival_erpos_chi2 bcac_icogs_survival_erpos_P1df bcac_icogs_gt_effect_allele bcac_icogs_gt_freq_controls bcac_icogs_gt_beta bcac_icogs_gt_se bcac_icogs_gt_OR bcac_icogs_gt_chi2 bcac_icogs_gt_P1df bcac_icogs_gt_erneg_beta bcac_icogs_gt_erneg_se bcac_icogs_gt_erneg_OR bcac_icogs_gt_erneg_chi2 bcac_icogs_gt_erneg_P1df bcac_icogs_gt_erpos_beta bcac_icogs_gt_erpos_se bcac_icogs_gt_erpos_OR bcac_icogs_gt_erpos_chi2 bcac_icogs_gt_erpos_P1df NA Yes EFO_1000649 NA NA Estrogen-receptor-positive breast cancer in Europeans, imputed genotype 120000 EUR NA NA b37/hg19 1 12000 BCP ERPBC ER-positive_Breast_Cancer Cancer 0 #A0A0A0 Yes BCAC_Overall_BreastCancer_EUR https://www.ncbi.nlm.nih.gov/pubmed/25890600 icogs_bcac_public_results_euro_overall.txt.gz icogs_bcac_public_results_euro.txt.gz http://bcac.ccge.medschl.cam.ac.uk/ BCAC http://bcac.ccge.medschl.cam.ac.uk/bcacdata/icogs-complete-summary-results/ NA var_name chr position_b37 a0 a1 phase3_1kg_id phase1_1kg_id bcac_icogs1_effect_allele bcac_icogs1_european_controls_eaf bcac_icogs1_european_r2 bcac_icogs1_risk_beta bcac_icogs1_risk_se bcac_icogs1_OR bcac_icogs1_risk_chi2 bcac_icogs1_risk_P1df bcac_icogs1_erneg_beta bcac_icogs1_erneg_se bcac_icogs1_erneg_OR bcac_icogs1_erneg_chi2 bcac_icogs1_erneg_P1df bcac_icogs1_erpos_beta bcac_icogs1_erpos_se bcac_icogs1_erpos_OR bcac_icogs1_erpos_chi2 bcac_icogs1_erpos_P1df bcac_icogs_survival_effect_allele bcac_icogs_survival_eaf bcac_icogs_survival_se bcac_icogs_survival_HR bcac_icogs_survival_chi2 bcac_icogs_survival_P1df bcac_icogs_survival_erneg_effect_allele bcac_icogs_survival_erneg_eaf bcac_icogs_survival_erneg_se bcac_icogs_survival_erneg_HR bcac_icogs_survival_erneg_chi2 bcac_icogs_survival_erneg_P1df bcac_icogs_survival_erpos_effect_allele bcac_icogs_survival_erpos_eaf bcac_icogs_survival_erpos_se bcac_icogs_survival_erpos_HR bcac_icogs_survival_erpos_chi2 bcac_icogs_survival_erpos_P1df bcac_icogs_gt_effect_allele bcac_icogs_gt_freq_controls bcac_icogs_gt_beta bcac_icogs_gt_se bcac_icogs_gt_OR bcac_icogs_gt_chi2 bcac_icogs_gt_P1df bcac_icogs_gt_erneg_beta bcac_icogs_gt_erneg_se bcac_icogs_gt_erneg_OR bcac_icogs_gt_erneg_chi2 bcac_icogs_gt_erneg_P1df bcac_icogs_gt_erpos_beta bcac_icogs_gt_erpos_se bcac_icogs_gt_erpos_OR bcac_icogs_gt_erpos_chi2 bcac_icogs_gt_erpos_P1df NA Yes EFO_0005606 NA NA Overall breast cancer in Europeans, imputed genotype 120000 EUR NA NA b37/hg19 1 62000 BCO BC Breast_Cancer Cancer 0 #A0A0A0 Yes tag.evrsmk.tbl http://www.ncbi.nlm.nih.gov/pubmed/20418890 tag.evrsmk.tbl.gz tag.evrsmk.tbl.gz https://www.med.unc.edu/pgc/results-and-downloads TAG https://www.med.unc.edu/pgc/files/resultfiles/tag.evrsmk.tbl.gz NA NA NA NA EFO_0003768 NA NA Tobacco Ever Smoker vs Never Smoker 74035 EUR 3/27/2014 NA b36/hg18 1 41969 TES SMOKE Smoker Psychiatric-neurologic 1 #0000A0