Preview

wiheto-teneto-fa04702
- .coveragerc
  
  54 Bytes
- .github
  - ISSUE_TEMPLATE
    - feature_request.md
      
      595 Bytes
- .gitnore
  
  363 Bytes
- .prospector.yml
  
  80 Bytes
- .travis.yml
  
  456 Bytes
- CHANGELOG.md
  
  22.4 kB
- CODE_OF_CONDUCT.md
  
  3.4 kB
- CONTRIBUTING.md
  
  683 Bytes
- Dockerfile
  - Dockerfile
    
    563 Bytes
- LICENSE
  
  35.1 kB
- MANIFEST.in
  
  115 Bytes
- README.md
  
  2.4 kB
- docs
  - Makefile
    
    603 Bytes
  - conf.py
    
    6.1 kB
  - contribute.rst
    
    806 Bytes
  - faq.rst
    
    743 Bytes
  - index.rst
    
    253 Bytes
  - networkmeasures
    - bursty_coeff.rst
      
      145 Bytes
    - fluctuability.rst
      
      146 Bytes
    - intercontacttime.rst
      
      158 Bytes
    - local_variation.rst
      
      159 Bytes
    - networkmeasures
      - bursty_coeff.rst
        
        145 Bytes
      - fluctuability.rst
        
        146 Bytes
      - intercontacttime.rst
        
        158 Bytes
      - local_variation.rst
        
        159 Bytes
      - reachability_latency.rst
        
        192 Bytes
      - shortest_temporal_path.rst
        
        176 Bytes
      - sid.rst
        
        115 Bytes
      - temporal_closeness_centrality.rst
        
        198 Bytes
      - temporal_degree_centrality.rst
        
        188 Bytes
      - temporal_efficiency.rst
        
        165 Bytes
      - temporal_part_coeff.rst
        
        164 Bytes
      - topological_overlap.rst
        
        166 Bytes
      - volatility.rst
        
        136 Bytes
    - reachability_latency.rst
      
      192 Bytes
    - shortest_temporal_path.rst
      
      176 Bytes
    - sid.rst
      
      115 Bytes
    - temporal_closeness_centrality.rst
      
      198 Bytes
    - temporal_degree_centrality.rst
      
      188 Bytes
    - temporal_efficiency.rst
      
      165 Bytes
    - temporal_part_coeff.rst
      
      164 Bytes
    - topological_overlap.rst
      
      166 Bytes
    - volatility.rst
      
      136 Bytes
  - requirements.txt
    
    248 Bytes
  - teneto.classes.rst
    
    207 Bytes
  - teneto.communitydetection.rst
    
    219 Bytes
  - teneto.communitymeasures.rst
    
    179 Bytes
  - teneto.generatenetwork.rst
    
    175 Bytes
  - teneto.networkmeasures.rst
    
    175 Bytes
  - teneto.plot.rst
    
    153 Bytes
  - teneto.rst
    
    234 Bytes
  - teneto.timeseries.rst
    
    165 Bytes
  - teneto.trajectory.rst
    
    325 Bytes
  - teneto.utils.rst
    
    155 Bytes
  - tutorial
    - generating_a_random_network.rst
      
      4.8 kB
    - images
      - contact_example.png
        
        58.9 kB
      - gennet_example1.png
        
        20.2 kB
      - gennet_example2.png
        
        57.4 kB
      - gennet_example3.png
        
        35.1 kB
      - graphlet_example.png
        
        22.9 kB
      - graphlet_example2.png
        
        19.3 kB
    - networkmeasures.rst
      
      2.6 kB
    - networkrepresentation.rst
      
      10.5 kB
    - plotting_a_temporal_network.rst
      
      3.7 kB
    - tctc.ipynb
      
      411.5 kB
    - tenetobids.ipynb
      
      14.7 kB
    - workflow.rst
      
      9.2 kB
  - tutorial.rst
    
    178 Bytes
  - what_is_tnt.rst
    
    8.3 kB
- requirements.txt
  
  277 Bytes
- setup.cfg
  
  130 Bytes
- setup.py
  
  1.3 kB
- teneto
  - __init__.py
    
    884 Bytes
  - _version.py
    
    21 Bytes
  - classes
    - __init__.py
      
      292 Bytes
    - bids.py
      
      17.5 kB
    - network.py
      
      18.8 kB
    - workflow.py
      
      9.0 kB
  - communitydetection
    - __init__.py
      
      293 Bytes
    - louvain.py
      
      6.3 kB
    - tctc.py
      
      13.3 kB
  - communitymeasures
    - __init__.py
      
      425 Bytes
    - allegiance.py
      
      1.3 kB
    - flexibility.py
      
      1.2 kB
    - integration.py
      
      1.7 kB
    - persistence.py
      
      1.8 kB
    - promiscuity.py
      
      1.0 kB
    - recruitment.py
      
      1.8 kB
  - config
    - tenetobids
      - tenetobids.json
        
        1.5 kB
      - tenetobids_description.json
        
        628 Bytes
      - tenetobids_structure.json
        
        5.9 kB
  - data
    - testdata
      - dummybids
        
        dataset_description.json
        
        54 Bytes
        
        derivatives
        
        fmriprep
        
        dataset_description.json
        
        139 Bytes
        
        sub-001
        
        func
        
        sub-001_task-a_run-01_desc-confounds_regressors.tsv
        
        438 Bytes
        
        sub-001_task-a_run-01_desc-preproc_bold.nii.gz
        
        15.4 MB
        
        sub-001_task-a_run-02_desc-confounds_regressors.tsv
        
        0 Bytes
        
        sub-001_task-a_run-02_desc-preproc_bold.nii.gz
        
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        sub-001_task-b_run-01_desc-confounds_regressors.tsv
        
        0 Bytes
        
        sub-001_task-b_run-01_desc-preproc_bold.nii.gz
        
        0 Bytes
        
        sub-002
        
        func
        
        sub-002_task-a_run-01_desc-confounds_regressors.tsv
        
        0 Bytes
        
        sub-002_task-a_run-01_desc-preproc_bold.nii.gz
        
        0 Bytes
        
        sub-002_task-a_run-02_desc-confounds_regressors.tsv
        
        0 Bytes
        
        sub-002_task-a_run-02_desc-preproc_bold.nii.gz
        
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        sub-002_task-b_run-01_desc-confounds_regressors.tsv
        
        0 Bytes
        
        sub-002_task-b_run-01_desc-preproc_bold.nii.gz
        
        0 Bytes
        
        teneto-tests
        
        dataset_description.json
        
        141 Bytes
        
        sub-001
        
        func
        
        parcellation
        
        sub-001_task-a_run-01_roi.tsv
        
        424 Bytes
        
        sub-001_task-a_run-02_roi.tsv
        
        0 Bytes
        
        sub-001_task-b_run-01_roi.tsv
        
        0 Bytes
        
        tvc
        
        sub-001_task-a_run-01_tvcconn.tsv
        
        0 Bytes
        
        sub-001_task-a_run-02_tvcconn.tsv
        
        0 Bytes
        
        sub-001_task-b_run-01_tvcconn.tsv
        
        447 Bytes
        
        sub-002
        
        func
        
        parcellation
        
        sub-002_task-a_run-01_roi.tsv
        
        0 Bytes
        
        sub-002_task-a_run-02_roi.tsv
        
        0 Bytes
        
        sub-002_task-b_run-01_roi.tsv
        
        12.4 kB
        
        tvc
        
        sub-002_task-a_run-01_tvc.tsv
        
        0 Bytes
        
        sub-002_task-a_run-02_tvc.tsv
        
        0 Bytes
        
        sub-002_task-b_run-01_tvcconn.json
        
        585 Bytes
        
        sub-002_task-b_run-01_tvcconn.tsv
        
        22.2 kB
        
        participants.tsv
        
        39 Bytes
        
        sub-001
        
        func
        
        sub-001_task-a_run-01_bold.nii.gz
        
        0 Bytes
        
        sub-001_task-a_run-02_bold.nii.gz
        
        0 Bytes
        
        sub-001_task-b_run-01_bold.nii.gz
        
        0 Bytes
        
        sub-002
        
        func
        
        sub-002_task-a_run-01_bold.nii.gz
        
        0 Bytes
        
        sub-002_task-a_run-02_bold.nii.gz
        
        0 Bytes
        
        sub-002_task-b_run-01_bold.nii.gz
        
        0 Bytes
  - generatenetwork
    - __init__.py
      
      170 Bytes
    - rand_binomial.py
      
      7.7 kB
    - rand_poisson.py
      
      3.0 kB
  - io
    - __init__.py
      
      146 Bytes
    - export.py
      
      2.1 kB
    - inportfrom.py
      
      1.3 kB
  - misc
    - __init__.py
      
      104 Bytes
    - corrcoef_matrix.py
      
      580 Bytes
  - networkmeasures
    - __init__.py
      
      1.2 kB
    - bursty_coeff.py
      
      7.8 kB
    - fluctuability.py
      
      4.0 kB
    - intercontacttimes.py
      
      3.3 kB
    - local_variation.py
      
      4.3 kB
    - reachability_latency.py
      
      2.5 kB
    - shortest_temporal_path.py
      
      10.0 kB
    - sid.py
      
      4.7 kB
    - temporal_betweenness_centrality.py
      
      3.4 kB
    - temporal_closeness_centrality.py
      
      2.5 kB
    - temporal_degree_centrality.py
      
      8.7 kB
    - temporal_efficiency.py
      
      1.9 kB
    - temporal_participation_coeff.py
      
      7.2 kB
    - topological_overlap.py
      
      5.0 kB
    - volatility.py
      
      8.4 kB
  - neuroimagingtools
    - __init__.py
      
      413 Bytes
    - bidsutils.py
      
      8.8 kB
    - fmriutils.py
      
      2.2 kB
  - plot
    - __init__.py
      
      222 Bytes
    - circle_plot.py
      
      3.5 kB
    - graphlet_stack_plot.py
      
      11.5 kB
    - slice_plot.py
      
      8.3 kB
  - timeseries
    - __init__.py
      
      552 Bytes
    - derive.py
      
      13.6 kB
    - postprocess.py
      
      4.7 kB
    - remove_confounds.py
      
      2.4 kB
    - report.py
      
      2.8 kB
  - trajectory
    - __init__.py
      
      74 Bytes
    - compression.py
      
      3.3 kB
  - utils
    - __init__.py
      
      1.1 kB
    - io.py
      
      420 Bytes
    - utils.py
      
      36.7 kB
- test
  - classes
    - test_temporalnetwork.py
      
      7.8 kB
    - test_workflow.py
      
      2.2 kB
  - communitydetection
    - test_communitydetection.py
      
      1.1 kB
    - test_tctc.py
      
      3.2 kB
  - communitymeasures
    - test_allegiance.py
      
      1.1 kB
    - test_flexibility.py
      
      475 Bytes
    - test_integration.py
      
      1.1 kB
    - test_persistence.py
      
      1.4 kB
    - test_promiscuity.py
      
      288 Bytes
    - test_recruitment.py
      
      700 Bytes
  - derive
    - test_derive.py
      
      3.4 kB
  - networkmeasures
    - test_burst.py
      
      1.5 kB
    - test_closenesscentrality.py
      
      1.1 kB
    - test_degreecentrality.py
      
      5.1 kB
    - test_fluctuability.py
      
      335 Bytes
    - test_local_variation.py
      
      711 Bytes
    - test_partcoef.py
      
      2.4 kB
    - test_shortesttemporalpath.py
      
      6.7 kB
    - test_topooverlap.py
      
      1.1 kB
    - test_volatility.py
      
      2.5 kB
  - plot
    - test_plot.py
      
      640 Bytes
  - tenetobids
    - __pycache__
      - selection.cpython-36-PYTEST.pyc
        
        4.6 kB
    - tenetobids_tests.py
      
      2.4 kB
  - test_generatenetwork
    - test_generatenetwork.py
      
      1.3 kB
    - test_randpoisson.py
      
      932 Bytes
  - utils
    - test_basictests.py
      
      6.9 kB
    - test_bidsutils.py
      
      313 Bytes
    - test_fmriutils.py
      
      961 Bytes
    - test_io.py
      
      337 Bytes

wiheto/teneto-0.5.0.zip