FAFB templatebrain objects encapsulate the physical dimensions of assembled FAFB serial section data. There is a different templatebrain for each assembly version.They are used to define the transformations between FAFB and other templates like JFRC2013 (see xform_brain)

FAFB13 Assembly v13 of FAFB full adult female brain EM volume (2016-12-07 - ).

FAFB12 Assembly v12 of FAFB full adult female brain EM volume (2016-04-01 to 2016-12-06)

FAFB11 Assembly v11 of FAFB full adult female brain EM volume (2016-02-09)

Details

FAFB13 is the default FAFB assembly since 2016-12-07.

See also

templatebrain, xform_brain

Examples

FAFB13
#> === Template Brain === #> Name: FAFB13 #> Short Name: FAFB13 #> Type: Stitched serial section EM volume of whole adult female brain #> Sex: F #> Dimensions:229791 x 142889 x 7063 voxels #> Voxel size: #> x = 4 nm #> y = 4 NA #> z = 35 NA #> Bounding box (nm): #> x = 0, y = 0, z = 0, #> x = 919160, y = 571552, z = 247170. #> Description: #> DOI:
dim(FAFB13)
#> [1] 229791 142889 7063
voxdims(FAFB13)
#> [1] 4 4 35
boundingbox(FAFB13)
#> [,1] [,2] [,3] #> [1,] 0 0 0 #> [2,] 919160 571552 247170 #> attr(,"class") #> [1] "boundingbox"