#### PROGRAM PARAMETERS #### backend = CPU backend_precision = double seed = 18112 #### SIM PARAMETERS #### sim_type = VMMC ensemble = NVT steps = 1e8 delta_translation = 0.11 delta_rotation = 0.22 T = 20C verlet_skin = 1.00 umbrella_sampling = 1 op_file =/rds/general/user/ag4916/home/STRAND/DS_25/op.txt weights_file = /rds/general/user/ag4916/home/STRAND/DS_25/wfile.txt ### Seq. Dependence ########## use_average_seq = 0 seq_dep_file = /rds/general/user/ag4916/home/oxDNA_svn/oxDNA/oxDNA1_sequence_dependent_parameters.txt small_system = 1 #### INPUT / OUTPUT #### topology =/rds/general/user/ag4916/home/STRAND/DS_25/generated.top conf_file =/rds/general/user/ag4916/home/STRAND/DS_25/generated.dat trajectory_file = /rds/general/user/ag4916/home/STRAND/DS_25/trajectory.dat no_stdout_energy = 0 restart_step_counter = 1 energy_file = energy.dat print_conf_interval = 1e4 print_energy_every = 1e4 time_scale = linear external_forces = 1 external_forces_file = /rds/general/user/ag4916/home/STRAND/DS_25/forces.dat fix_diffusion = 0