R/ngraph.R
Prune a neuron by removing segments with a given Strahler order
prune_strahler(x, orderstoprune = 1:2, ...)
x | A |
---|---|
orderstoprune | Integer indices of which Strahler orders to prune -
defaults to the lowest two orders ( |
... | Additional arguments passed to |
The pruned neuron
strahler_order
, spine
, for finding the
longest path in a neuron, prune
for subsetting
dotprops
style neurons by spatial proximity,
as.neuron.data.frame
, which is used to generate the new
neuron.
x=Cell07PNs[[1]] pruned12=prune_strahler(x) pruned1=prune_strahler(x, 1) plot(x)plot(pruned1, lwd=3, col='blue', add=TRUE)plot(pruned12, lwd=3, col='red', add=TRUE)