R/neuron-io-fiji.R
Read a neuron saved by Fiji's Simple Neurite Tracer Plugin
read.neuron.fiji(f, ..., simplify = TRUE, Verbose = FALSE)
f | Path to a file |
---|---|
... | Additional arguments passed to |
simplify | Whether to return a single neuron as a |
Verbose | Whether to print status messages during parsing. |
This is an XML based format so parsing it depends on installation of the suggested XML package.
http://fiji.sc/Simple_Neurite_Tracer http://fiji.sc/Simple_Neurite_Tracer:_.traces_File_Format