odelaneau/clomics: Clomics

Clomics is a software package to analyse the correlation structure within population scale datasets of molecular phenotypes such as those collected through ATAC-seq or ChIP-seq. This was developed as part of the following study:

Olivier Delaneau, Marianna Zazhytska, Christelle Borel, Cedric Howald, Sunil Kumar, Halit Ongen, Konstantin Popadin, Daniel Marbach, Giovanna Ambrosini, Deborah Bielser, David Hacker, Luciana Romano-Palumbo, Pascal Ribaux, Michael Wiederkehr, Emilie Falconnet, Philipp Bucher, Sven Bergmann, Stylianos Antonarakis, Alexandre Reymond, Emmanouil Dermitzakis. Intra- and inter-chromosomal chromatin interactions mediate genetic effects on regulatory networks. BioRxiv 2017 [https://www.biorxiv.org/content/early/2017/08/03/171694].