{
  "access": {
    "embargo": {
      "active": false,
      "reason": null
    },
    "files": "public",
    "record": "public",
    "status": "open"
  },
  "created": "2026-05-28T16:07:39.372188+00:00",
  "custom_fields": {
    "legacy:communities": [
      "f312c6b6-0dd6-4fb2-a224-7c4960394ac1",
      "f312c6b6-0dd6-4fb2-a224-7c4960394ac1",
      "dockstore"
    ]
  },
  "deletion_status": {
    "is_deleted": false,
    "status": "P"
  },
  "files": {
    "count": 1,
    "enabled": true,
    "entries": {
      "github.com-iwc-workflows-host-contamination-removal-short-reads-main_v0.4.zip": {
        "access": {
          "hidden": false
        },
        "checksum": "md5:b36d8c6168bafafb5bded55308901ec3",
        "ext": "zip",
        "id": "e11ea107-c8cf-4e86-963d-b7e42dae486d",
        "key": "github.com-iwc-workflows-host-contamination-removal-short-reads-main_v0.4.zip",
        "links": {
          "content": "https://zenodo.org/api/records/20432280/files/github.com-iwc-workflows-host-contamination-removal-short-reads-main_v0.4.zip/content",
          "self": "https://zenodo.org/api/records/20432280/files/github.com-iwc-workflows-host-contamination-removal-short-reads-main_v0.4.zip"
        },
        "metadata": {},
        "mimetype": "application/zip",
        "size": 5227,
        "storage_class": "L"
      }
    },
    "order": [],
    "total_bytes": 5227
  },
  "id": "20432280",
  "is_draft": false,
  "is_published": true,
  "links": {
    "access": "https://zenodo.org/api/records/20432280/access",
    "access_grants": "https://zenodo.org/api/records/20432280/access/grants",
    "access_links": "https://zenodo.org/api/records/20432280/access/links",
    "access_request": "https://zenodo.org/api/records/20432280/access/request",
    "access_users": "https://zenodo.org/api/records/20432280/access/users",
    "archive": "https://zenodo.org/api/records/20432280/files-archive",
    "archive_media": "https://zenodo.org/api/records/20432280/media-files-archive",
    "communities": "https://zenodo.org/api/records/20432280/communities",
    "communities-suggestions": "https://zenodo.org/api/records/20432280/communities-suggestions",
    "doi": "https://doi.org/10.5281/zenodo.20432280",
    "draft": "https://zenodo.org/api/records/20432280/draft",
    "file_modification": "https://zenodo.org/api/records/20432280/file-modification",
    "files": "https://zenodo.org/api/records/20432280/files",
    "latest": "https://zenodo.org/api/records/20432280/versions/latest",
    "latest_html": "https://zenodo.org/records/20432280/latest",
    "media_files": "https://zenodo.org/api/records/20432280/media-files",
    "parent": "https://zenodo.org/api/records/17832962",
    "parent_doi": "https://doi.org/10.5281/zenodo.17832962",
    "parent_doi_html": "https://zenodo.org/doi/10.5281/zenodo.17832962",
    "parent_html": "https://zenodo.org/records/17832962",
    "preview_html": "https://zenodo.org/records/20432280?preview=1",
    "quota_increase": "https://zenodo.org/api/records/20432280/quota-increase",
    "request_deletion": "https://zenodo.org/api/records/20432280/request-deletion",
    "requests": "https://zenodo.org/api/records/20432280/requests",
    "reserve_doi": "https://zenodo.org/api/records/20432280/draft/pids/doi",
    "self": "https://zenodo.org/api/records/20432280",
    "self_doi": "https://doi.org/10.5281/zenodo.20432280",
    "self_doi_html": "https://zenodo.org/doi/10.5281/zenodo.20432280",
    "self_html": "https://zenodo.org/records/20432280",
    "self_iiif_manifest": "https://zenodo.org/api/iiif/record:20432280/manifest",
    "self_iiif_sequence": "https://zenodo.org/api/iiif/record:20432280/sequence/default",
    "versions": "https://zenodo.org/api/records/20432280/versions"
  },
  "media_files": {
    "count": 0,
    "enabled": false,
    "entries": {},
    "order": [],
    "total_bytes": 0
  },
  "metadata": {
    "creators": [
      {
        "affiliations": [
          {
            "name": "Institut Fran\u00e7ais de Bioinformatique"
          }
        ],
        "person_or_org": {
          "family_name": "B\u00e9r\u00e9nice Batut",
          "identifiers": [
            {
              "identifier": "0000-0001-9852-1987",
              "scheme": "orcid"
            }
          ],
          "name": "B\u00e9r\u00e9nice Batut",
          "type": "personal"
        }
      },
      {
        "person_or_org": {
          "family_name": "Paul Zierep",
          "identifiers": [
            {
              "identifier": "0000-0003-2982-388X",
              "scheme": "orcid"
            }
          ],
          "name": "Paul Zierep",
          "type": "personal"
        }
      }
    ],
    "description": "<p>This workflow takes paired-end Illumina fastq(.gz) files and runs Bowtie to map the reads against a reference genome (human, by default) and keep only the reads that do not align. MultiQC is used to aggregate the mapping reports.</p>",
    "publication_date": "2026-05-28",
    "publisher": "Zenodo",
    "related_identifiers": [
      {
        "identifier": "https://dockstore.org/aliases/workflow-versions/10.5281-zenodo.20432280",
        "relation_type": {
          "id": "isidenticalto",
          "title": {
            "de": "Ist identisch mit",
            "en": "Is identical to"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://dockstore.org/workflows/github.com/iwc-workflows/host-contamination-removal-short-reads/main:v0.4",
        "relation_type": {
          "id": "isidenticalto",
          "title": {
            "de": "Ist identisch mit",
            "en": "Is identical to"
          }
        },
        "scheme": "url"
      },
      {
        "identifier": "https://dockstore.org/api/ga4gh/trs/v2/tools/%23workflow%2Fgithub.com%2Fiwc-workflows%2Fhost-contamination-removal-short-reads%2Fmain/versions/v0.4/PLAIN-gxformat2/descriptor/host-or-contamination-removal-on-short-reads.ga",
        "relation_type": {
          "id": "isidenticalto",
          "title": {
            "de": "Ist identisch mit",
            "en": "Is identical to"
          }
        },
        "scheme": "url"
      }
    ],
    "resource_type": {
      "id": "software",
      "title": {
        "de": "Software",
        "en": "Software"
      }
    },
    "rights": [
      {
        "description": {
          "en": "The Creative Commons Attribution license allows re-distribution and re-use of a licensed work on the condition that the creator is appropriately credited."
        },
        "icon": "cc-by-icon",
        "id": "cc-by-4.0",
        "props": {
          "scheme": "spdx",
          "url": "https://creativecommons.org/licenses/by/4.0/legalcode"
        },
        "title": {
          "en": "Creative Commons Attribution 4.0 International"
        }
      }
    ],
    "title": "github.com/iwc-workflows/host-contamination-removal-short-reads/main",
    "version": "v0.4"
  },
  "parent": {
    "access": {
      "owned_by": {
        "user": "76183"
      },
      "settings": {
        "accept_conditions_text": null,
        "allow_guest_requests": false,
        "allow_user_requests": false,
        "secret_link_expiration": 0
      }
    },
    "communities": {
      "default": "f312c6b6-0dd6-4fb2-a224-7c4960394ac1",
      "entries": [
        {
          "access": {
            "member_policy": "open",
            "members_visibility": "public",
            "record_submission_policy": "open",
            "review_policy": "open",
            "visibility": "public"
          },
          "children": {
            "allow": false
          },
          "created": "2024-11-05T20:16:09.639062+00:00",
          "custom_fields": {},
          "deletion_status": {
            "is_deleted": false,
            "status": "P"
          },
          "id": "f312c6b6-0dd6-4fb2-a224-7c4960394ac1",
          "links": {},
          "metadata": {
            "description": "Dockstore is a free and open source platform for sharing reusable and scalable analytical tools and workflows.",
            "title": "Dockstore",
            "type": {
              "id": "project"
            },
            "website": "https://dockstore.org/"
          },
          "revision_id": 5,
          "slug": "dockstore",
          "updated": "2024-11-05T20:17:15.254457+00:00"
        }
      ],
      "ids": [
        "f312c6b6-0dd6-4fb2-a224-7c4960394ac1"
      ]
    },
    "id": "17832962",
    "pids": {
      "doi": {
        "client": "datacite",
        "identifier": "10.5281/zenodo.17832962",
        "provider": "datacite"
      }
    }
  },
  "pids": {
    "doi": {
      "client": "datacite",
      "identifier": "10.5281/zenodo.20432280",
      "provider": "datacite"
    },
    "oai": {
      "identifier": "oai:zenodo.org:20432280",
      "provider": "oai"
    }
  },
  "revision_id": 4,
  "stats": {
    "all_versions": {
      "data_volume": 160327.0,
      "downloads": 37,
      "unique_downloads": 37,
      "unique_views": 158,
      "views": 159
    },
    "this_version": {
      "data_volume": 73178.0,
      "downloads": 14,
      "unique_downloads": 14,
      "unique_views": 23,
      "views": 23
    }
  },
  "status": "published",
  "swh": {},
  "updated": "2026-05-28T16:07:39.627475+00:00",
  "versions": {
    "index": 4,
    "is_latest": true
  }
}