Published December 25, 2025
| Version v2.5.16.0
Software
Open
github.com/broadinstitute/viral-pipelines/sarscov2_illumina_full
Authors/Creators
Description
Full SARS-CoV-2 analysis workflow starting from raw Illumina flowcell (tar.gz) and metadata and performing assembly, spike-in analysis, qc, lineage assignment, and packaging for data release.
Files
github.com-broadinstitute-viral-pipelines-sarscov2_illumina_full_v2.5.16.0.zip
Files
(128.0 kB)
| Name | Size | Download all |
|---|---|---|
|
md5:451343e1780ba91bc3b46eda290b2153
|
128.0 kB | Preview Download |
Additional details
Related works
- Is identical to
- https://dockstore.org/aliases/workflow-versions/10.5281-zenodo.18054136 (URL)
- https://dockstore.org/workflows/github.com/broadinstitute/viral-pipelines/sarscov2_illumina_full:v2.5.16.0 (URL)
- https://dockstore.org/api/ga4gh/trs/v2/tools/%23workflow%2Fgithub.com%2Fbroadinstitute%2Fviral-pipelines%2Fsarscov2_illumina_full/versions/v2.5.16.0/PLAIN-WDL/descriptor/sarscov2_illumina_full.wdl (URL)