Published December 12, 2025 | Version 3.22.2
Software Open

nf-core/rnaseq: nf-core/rnaseq v3.22.2 - Perfect Palladium Penguin

Authors/Creators

  • 1. Seqera
  • 2. @seqeralabs
  • 3. Boehringer Ingelheim
  • 4. @seanome
  • 5. @SciLifeLab
  • 6. Inivata
  • 7. @NBISweden
  • 8. Johns Hopkins University
  • 9. @qbicsoftware
  • 10. Seqera Labs
  • 11. Francis Crick Institute @crickbabs
  • 12. University of Pavia
  • 13. HKI Jena, MPI-EVA Leipzig
  • 14. @ScilifelabDataCentre
  • 15. >_ glicht
  • 16. CRG
  • 17. The Francis Crick Institute

Description

What's Changed

  • Bump after release 3.22.1 by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1656
  • Bump nf-core/multiqc module by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1658
  • Update MultiQC ARM container to 1.33 by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1660
  • Fix duplicate flagstat files in MultiQC report by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1655
  • fix(tximport): handle tx2gene files with extra columns by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1654
  • Reduce duplicate coverage in pipeline tests by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1648
  • Fix MultiQC sample name collisions with shared FASTQ filenames by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1659
  • Bump version to 3.22.2 ahead of release by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1661
  • Dev -> master for nf-core/rnaseq 3.22.2 by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1662

Full Changelog: https://github.com/nf-core/rnaseq/compare/3.22.1...3.22.2

Files

nf-core/rnaseq-3.22.2.zip

Files (7.3 MB)

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md5:b690eee6c01638407670469d6e967f12
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Additional details

Related works

Is supplement to
Software: https://github.com/nf-core/rnaseq/tree/3.22.2 (URL)

Software

Repository URL
https://github.com/nf-core/rnaseq