RID: H47XDWV7014 Job Title:sp|P0DTC2|SPIKE_SARS2 Spike glycoprotein Program: BLASTP Query: sp|P0DTC2|SPIKE_SARS2 Spike glycoprotein OS=Severe acute respiratory syndrome coronavirus 2 OX=2697049 GN=S PE=1 SV=1 ID: lcl|Query_6827186(amino acid) Length: 1273 Database: nr All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Sequences producing significant alignments: Sequences with E-value BETTER than threshold Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession Chain A, Spike glycoprotein [Homo sapiens] Homo sapiens human 9606 2729 2729 94% 0.0 99.33 1198 7Y71_A Chain J, Spike glycoprotein [Homo sapiens] Homo sapiens human 9606 2600 2600 94% 0.0 95.92 1274 7TLZ_J Chain R, Spike glycoprotein [Homo sapiens] Homo sapiens human 9606 2530 2530 94% 0.0 93.92 1273 9ASD_R Chain A, Spike glycoprotein [Homo sapiens] Homo sapiens human 9606 2015 2015 94% 0.0 75.35 1167 9VG7_A Chain D, Spike protein S1 [Homo sapiens] Homo sapiens human 9606 494 494 17% 3e-157 100.00 211 7TE1_D Chain B, Spike glycoprotein [Homo sapiens] Homo sapiens human 9606 485 485 16% 3e-154 99.52 208 8T23_B Chain C, Spike protein S1 [Homo sapiens] Homo sapiens human 9606 455 455 15% 6e-144 100.00 199 8BG1_C Chain E, Spike protein S2' [Homo sapiens] Homo sapiens human 9606 453 453 15% 5e-143 98.47 202 8CII_E Chain A, Spike protein S1 [Homo sapiens] Homo sapiens human 9606 421 421 15% 4e-132 92.31 195 7WI0_A Chain B, Spike protein S1 [Homo sapiens] Homo sapiens human 9606 420 420 15% 6e-132 92.31 195 7TC9_B Chain B, Spike protein S1 [Homo sapiens] Homo sapiens human 9606 417 417 16% 4e-130 89.50 219 8ASY_B Chain R, Spike protein S1 [Homo sapiens] Homo sapiens human 9606 414 414 15% 9e-130 92.19 193 7Y0W_R Chain A, PDCoV spike glycoprotein S1A domain [Homo sapiens] Homo sapiens human 9606 320 320 40% 1e-86 35.79 1079 8R9X_A Sequences with E-value WORSE than threshold Scientific Common Max Total Query E Per. Acc. Description Name Name Taxid Score Score cover Value Ident Len Accession biogenesis of lysosomal organelles complex 1 subunit 6, partia... Homo sapiens human 9606 34.5 34.5 5% 4.5 28.33 113 KAI2574041.1 Alignments: >Chain A, Spike glycoprotein [Homo sapiens] Sequence ID: 7Y71_A Length: 1198 >Chain B, Spike glycoprotein [Homo sapiens] Sequence ID: 7Y71_B Length: 1198 >Chain C, Spike glycoprotein [Homo sapiens] Sequence ID: 7Y71_C Length: 1198 >Chain A, Spike glycoprotein [Homo sapiens] Sequence ID: 7Y72_A Length: 1198 >Chain C, Spike glycoprotein [Homo sapiens] Sequence ID: 7Y72_C Length: 1198 Range 1: 1 to 1198 Score:2729 bits(6362), Expect:0.0, Method:Compositional matrix adjust., Identities:1190/1198(99%), Positives:1190/1198(99%), Gaps:0/1198(0%) Query 16 VNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNG 75 VNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNG Sbjct 1 VNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNG 60 Query 76 TKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQF 135 TKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQF Sbjct 61 TKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQF 120 Query 136 CNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFK 195 CNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFK Sbjct 121 CNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFK 180 Query 196 NIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSS 255 NIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSS Sbjct 181 NIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSS 240 Query 256 SGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQT 315 SGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQT Sbjct 241 SGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQT 300 Query 316 SNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFS 375 SNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFS Sbjct 301 SNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFS 360 Query 376 TFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIA 435 TFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIA Sbjct 361 TFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIA 420 Query 436 WNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSY 495 WNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSY Sbjct 421 WNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSY 480 Query 496 GFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTES 555 GFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTES Sbjct 481 GFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTES 540 Query 556 NKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDV 615 NKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDV Sbjct 541 NKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDV 600 Query 616 NCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQ 675 NCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQ Sbjct 601 NCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQ 660 Query 676 TQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTS 735 TQTNSPR A SVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTS Sbjct 661 TQTNSPRAAASVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTS 720 Query 736 VDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIK 795 VDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIK Sbjct 721 VDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIK 780 Query 796 DFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKF 855 DFGGFNFSQILPDPSKPSKRS IEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKF Sbjct 781 DFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKF 840 Query 856 NGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNV 915 NGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAG ALQIPF MQMAYRFNGIGVTQNV Sbjct 841 NGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNV 900 Query 916 LYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISS 975 LYENQKLIANQFNSAIGKIQDSLSST SALGKLQDVVNQNAQALNTLVKQLSSNFGAISS Sbjct 901 LYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALNTLVKQLSSNFGAISS 960 Query 976 VLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG 1035 VLNDILSRLD EAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG Sbjct 961 VLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG 1020 Query 1036 QSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVF 1095 QSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVF Sbjct 1021 QSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVF 1080 Query 1096 VSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKY 1155 VSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKY Sbjct 1081 VSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKY 1140 Query 1156 FKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWP 1213 FKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWP Sbjct 1141 FKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWP 1198 >Chain J, Spike glycoprotein [Homo sapiens] Sequence ID: 7TLZ_J Length: 1274 Range 1: 12 to 1205 Score:2600 bits(6061), Expect:0.0, Method:Compositional matrix adjust., Identities:1151/1200(96%), Positives:1157/1200(96%), Gaps:9/1200(0%) Query 12 SSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVS 71 SSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFH I S Sbjct 12 SSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVI--S 69 Query 72 GTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVC 131 GTNGTKRFDNPVLPFNDGVYFAS EKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVC Sbjct 70 GTNGTKRFDNPVLPFNDGVYFASIEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVC 129 Query 132 EFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLRE 191 EFQFCNDPFL HKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLRE Sbjct 130 EFQFCNDPFLD---HKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLRE 186 Query 192 FVFKNIDGYFKIYSKHTPINLVR---DLPQGFSALEPLVDLPIGINITRFQTLLALHRSY 248 FVFKNIDGYFKIYSKHTPI +VR DLPQGFSALEPLVDLPIGINITRFQTLLALHRSY Sbjct 187 FVFKNIDGYFKIYSKHTPI-IVREPEDLPQGFSALEPLVDLPIGINITRFQTLLALHRSY 245 Query 249 LTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTV 308 LTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTV Sbjct 246 LTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTV 305 Query 309 EKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVL 368 EKGIYQTSNFRVQPTESIVRFPNITNLCPF EVFNATRFASVYAWNRKRISNCVADYSVL Sbjct 306 EKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVL 365 Query 369 YNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDD 428 YN A F TFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTG IADYNYKLPDD Sbjct 366 YNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDD 425 Query 429 FTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNC 488 FTGCVIAWNSN LDSKV GNYNYLYRLFRKSNLKPFERDISTEIYQAG+ PCNGV GFNC Sbjct 426 FTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNC 485 Query 489 YFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTG 548 YFPL+SY F+PT GVG+QPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGL G Sbjct 486 YFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLKG 545 Query 549 TGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQV 608 TGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQV Sbjct 546 TGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQV 605 Query 609 AVLYQDVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGA 668 AVLYQ VNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAE+VNNSYECDIPIGA Sbjct 606 AVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGA 665 Query 669 GICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILP 728 GICASYQTQT S A SVASQSIIAYTMSLGAENSVA SNNSIAIPTNFTISVTTEILP Sbjct 666 GICASYQTQTKSHSGAGSVASQSIIAYTMSLGAENSVACSNNSIAIPTNFTISVTTEILP 725 Query 729 VSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQI 788 VSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQL RALTGIAVEQDKNTQEVFAQVKQI Sbjct 726 VSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQI 785 Query 789 YKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARD 848 YKTPPIK FGGFNFSQILPDPSKPSKRS IEDLLFNKVTLADAGFIKQYGDCLGDIAARD Sbjct 786 YKTPPIKYFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARD 845 Query 849 LICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNG 908 LICAQKF GLTVLPPLLTDEMIAQYTSALLAGTI SGWTFGAG ALQIPF MQMAYRFNG Sbjct 846 LICAQKFKGLTVLPPLLTDEMIAQYTSALLAGTICSGWTFGAGPALQIPFPMQMAYRFNG 905 Query 909 IGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSS 968 IGVTQNVLYENQKLIANQFNSAIGKIQDSLSST SALGKLQDVVN NAQALNTLVKQLSS Sbjct 906 IGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNHNAQALNTLVKQLSS 965 Query 969 NFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATK 1028 FGAISSVLNDI SRLDK EAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATK Sbjct 966 KFGAISSVLNDIFSRLDKPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATK 1025 Query 1029 MSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAH 1088 MSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAH Sbjct 1026 MSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAH 1085 Query 1089 FPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSF 1148 FPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSF Sbjct 1086 FPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSF 1145 Query 1149 KEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQ 1208 KEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQ Sbjct 1146 KEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQ 1205 >Chain R, Spike glycoprotein [Homo sapiens] Sequence ID: 9ASD_R Length: 1273 Range 1: 12 to 1204 Score:2530 bits(5898), Expect:0.0, Method:Compositional matrix adjust., Identities:1128/1201(94%), Positives:1142/1201(95%), Gaps:12/1201(0%) Query 12 SSQCV----NLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHA 67 SSQCV NL T TQ +YTNSFTRGVYYPDKVFRSSVLH TQDLFLPFFSNVTWFHA Sbjct 12 SSQCVMPLFNLITTTQ---SYTNSFTRGVYYPDKVFRSSVLHLTQDLFLPFFSNVTWFHA 68 Query 68 IHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVV 127 I SGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV Sbjct 69 I--SGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVF 126 Query 128 IKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFK 187 IKVCEFQFCNDPFL VY HKNNKSWMESE VYSSANNCTFEYVSQPFLMDLEGKQGNFK Sbjct 127 IKVCEFQFCNDPFLDVY-HKNNKSWMESESGVYSSANNCTFEYVSQPFLMDLEGKQGNFK 185 Query 188 NLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRS 247 NLREFVFKNIDGYFKIYSKHTPI + RD PQGFSALEPLVDLPIGINITRFQTLLAL+RS Sbjct 186 NLREFVFKNIDGYFKIYSKHTPI-IGRDFPQGFSALEPLVDLPIGINITRFQTLLALNRS 244 Query 248 YLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFT 307 YLTPGDSSSGWTAGAA YYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFT Sbjct 245 YLTPGDSSSGWTAGAADYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFT 304 Query 308 VEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSV 367 VEKGIYQTSNFRVQPTESIVRFPN+TNLCPF EVFNATRFASVYAWNR RISNCVADYSV Sbjct 305 VEKGIYQTSNFRVQPTESIVRFPNVTNLCPFHEVFNATRFASVYAWNRTRISNCVADYSV 364 Query 368 LYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPD 427 LYN A F FKCYGVSPTKLNDLCFTNVYADSFVI+G+EV QIAPGQTG IADYNYKLPD Sbjct 365 LYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIKGNEVSQIAPGQTGNIADYNYKLPD 424 Query 428 DFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFN 487 DFTGCVIAWNSN LDSK GNY+Y YRLFRKS LKPFERDISTEIYQAG+ PC G +G N Sbjct 425 DFTGCVIAWNSNKLDSKHSGNYDYWYRLFRKSKLKPFERDISTEIYQAGNKPCKG-KGPN 483 Query 488 CYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLT 547 CYFPLQSYGF+PT GVG+QPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLT Sbjct 484 CYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLT 543 Query 548 GTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQ 607 GTGVLT+SNKKFLPFQQFGRDI DTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQ Sbjct 544 GTGVLTKSNKKFLPFQQFGRDIVDTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQ 603 Query 608 VAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIG 667 VAVLYQ VNCTEV VAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAE+VNNSYECDIPIG Sbjct 604 VAVLYQGVNCTEVSVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIG 663 Query 668 AGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEIL 727 AG+CASYQTQT S A SVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEIL Sbjct 664 AGVCASYQTQTKSRGSASSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEIL 723 Query 728 PVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQ 787 PVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQL RALTGIAVEQDKNTQEVFAQVKQ Sbjct 724 PVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQ 783 Query 788 IYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAAR 847 IYKTPPIK FGGFNFSQILPDPSKPSKRS IEDLLFNKVTLADAGFIKQYGDCLGDIAAR Sbjct 784 IYKTPPIKYFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAAR 843 Query 848 DLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFN 907 DLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAG ALQIPF MQMAYRFN Sbjct 844 DLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFN 903 Query 908 GIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLS 967 GIGVTQNVLYENQKLIANQFNSAIGKIQDSL ST SALGKLQDVVN NAQALNTLVKQLS Sbjct 904 GIGVTQNVLYENQKLIANQFNSAIGKIQDSLFSTPSALGKLQDVVNHNAQALNTLVKQLS 963 Query 968 SNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAAT 1027 S FGAISSVLNDILSRLD EAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAAT Sbjct 964 SKFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAAT 1023 Query 1028 KMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKA 1087 KMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKA Sbjct 1024 KMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKA 1083 Query 1088 HFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS 1147 HFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQ ELDS Sbjct 1084 HFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQLELDS 1143 Query 1148 FKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYE 1207 FKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYE Sbjct 1144 FKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYE 1203 Query 1208 Q 1208 Q Sbjct 1204 Q 1204 >Chain A, Spike glycoprotein [Homo sapiens] Sequence ID: 9VG7_A Length: 1167 >Chain B, Spike glycoprotein [Homo sapiens] Sequence ID: 9VG7_B Length: 1167 >Chain C, Spike glycoprotein [Homo sapiens] Sequence ID: 9VG7_C Length: 1167 Range 1: 1 to 1158 Score:2015 bits(4696), Expect:0.0, Method:Compositional matrix adjust., Identities:905/1201(75%), Positives:1005/1201(83%), Gaps:48/1201(3%) Query 15 CVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTN 74 CVN+T + Y +S TRGVYYPD FRSS + FLPF SNVTW+ + Sbjct 1 CVNITYGSH--HLYVSSRTRGVYYPDDAFRSSTNVLHEGFFLPFDSNVTWYSFWN----- 53 Query 75 GTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQ 134 +++ PF DGVYF++ +KSN++RGW+FGTTLD+ TQS+L+ N+ T+V ++VC F Sbjct 54 --QKYSVATSPFGDGVYFSTIDKSNVVRGWVFGTTLDNDTQSVLLYNDGTHVRVEVCTFH 111 Query 135 FCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVF 194 FC P S +YSSA NCT Y D G+FK +REFVF Sbjct 112 FCPTPVFSA-----------SSPHLYSSAFNCTLNYTLASVRADFTEVDGSFKTIREFVF 160 Query 195 KNIDGYFKIYSKHT----PINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLT 250 K DG +Y T I LP G + L PL +PIG+NIT F+TL+ L RS T Sbjct 161 KLQDGSLNVYYASTSYVLAIGATSQLPSGVTPLVPLWKIPIGLNITNFKTLVYL-RSDNT 219 Query 251 PGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEK 310 P AAY VG+L+ RT + KY+ENGTI DA+DCALDPLSETKCTL+SF VEK Sbjct 220 PLQ---------AAYVVGHLKRRTMMFKYDENGTIVDAIDCALDPLSETKCTLRSFIVEK 270 Query 311 GIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYN 370 GIYQTSNFRVQP +++VRFPNITNLCPF EVFNAT FASVYAWNRKRISNCVADYSVLYN Sbjct 271 GIYQTSNFRVQPQDTVVRFPNITNLCPFSEVFNATTFASVYAWNRKRISNCVADYSVLYN 330 Query 371 SASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFT 430 S SFSTF+CYGVS TKLNDLCFTNVYADSFV+RGDEVRQIAPGQTG IADYNYKLPDDFT Sbjct 331 STSFSTFQCYGVSSTKLNDLCFTNVYADSFVVRGDEVRQIAPGQTGVIADYNYKLPDDFT 390 Query 431 GCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYF 490 GCV+AWNS N D+ GN+NY YR++R L+PFERDI+ YQ G+ + Sbjct 391 GCVLAWNSRNQDASTSGNFNYYYRIWRSEKLRPFERDIAHYDYQVGTQFKSS-------- 442 Query 491 PLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTG 550 L++YGF + G +QPYRVVVLSFELL+APATVCGPK+ST L+KNKCVNFNFNGLTGTG Sbjct 443 -LKNYGFYSSAGDSHQPYRVVVLSFELLNAPATVCGPKQSTELIKNKCVNFNFNGLTGTG 501 Query 551 VLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAV 610 VLT+SNKKF FQQFGRD++D TD+V+DP+TLE+LDITPCS+GGVSVITPGTN S QVAV Sbjct 502 VLTDSNKKFQSFQQFGRDVSDFTDSVKDPKTLEVLDITPCSYGGVSVITPGTNASTQVAV 561 Query 611 LYQDVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGI 670 LYQDVNCT+VP AIHA+QLTP+WRVYSTG+N+FQT+AGCLIGAEHVNNSY+CDIPIGAGI Sbjct 562 LYQDVNCTDVPTAIHAEQLTPSWRVYSTGTNMFQTQAGCLIGAEHVNNSYDCDIPIGAGI 621 Query 671 CASYQTQTNSPRRARSVAS-QSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPV 729 CA+Y T P RS + + I+AY MSLGAENSVAYSNN+IAIPTNFTISVTTE++PV Sbjct 622 CATYHT----PSMLRSANNNKRIVAYVMSLGAENSVAYSNNTIAIPTNFTISVTTEVMPV 677 Query 730 SMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIY 789 SMTKTSVDCTMYICGDS ECS LLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIY Sbjct 678 SMTKTSVDCTMYICGDSVECSTLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIY 737 Query 790 KTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDL 849 KTP IKDFGGFNFSQILPDPSKPSKRS IEDLLFNKVTLADAGF+KQYGDCLGDI ARDL Sbjct 738 KTPDIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFVKQYGDCLGDIQARDL 797 Query 850 ICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGI 909 ICAQKFNGLTVLPPLLTDEMIA YT+AL++GT T+GWTFGAG ALQIPF MQMAYRFNGI Sbjct 798 ICAQKFNGLTVLPPLLTDEMIAAYTAALISGTATAGWTFGAGPALQIPFPMQMAYRFNGI 857 Query 910 GVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSN 969 GVTQNVLYENQKLIANQFNSAIGKIQ+SL+ST SALGKLQDVVNQNAQALNTLVKQLSSN Sbjct 858 GVTQNVLYENQKLIANQFNSAIGKIQESLTSTPSALGKLQDVVNQNAQALNTLVKQLSSN 917 Query 970 FGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKM 1029 FGAISSVLNDI+SRLD EAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKM Sbjct 918 FGAISSVLNDIISRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKM 977 Query 1030 SECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHF 1089 SECVLGQSKRVDFCGKGYHLMSFPQ+APHGVVFLHVTY+P+QE+NFTTAPAICH+GKAHF Sbjct 978 SECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYIPSQERNFTTAPAICHEGKAHF 1037 Query 1090 PREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFK 1149 PREGVFVSNGTHWF+TQRNFYEPQIITTDNTFVSG CDVVIGIVNNTVYDPLQPEL+SFK Sbjct 1038 PREGVFVSNGTHWFITQRNFYEPQIITTDNTFVSGTCDVVIGIVNNTVYDPLQPELESFK 1097 Query 1150 EELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQY 1209 +ELDKYFKNHTSPD+DLGDISGINASVV+IQKEID L +VAKNLNESLI+LQELGKYEQY Sbjct 1098 DELDKYFKNHTSPDIDLGDISGINASVVDIQKEIDILKDVAKNLNESLINLQELGKYEQY 1157 Query 1210 I 1210 I Sbjct 1158 I 1158 >Chain D, Spike protein S1 [Homo sapiens] Sequence ID: 7TE1_D Length: 211 >Chain E, Spike protein S1 [Homo sapiens] Sequence ID: 7TE1_E Length: 211 Range 1: 1 to 211 Score:494 bits(1145), Expect:3e-157, Method:Compositional matrix adjust., Identities:211/211(100%), Positives:211/211(100%), Gaps:0/211(0%) Query 319 RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFK 378 RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFK Sbjct 1 RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFK 60 Query 379 CYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNS 438 CYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNS Sbjct 61 CYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNS 120 Query 439 NNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQ 498 NNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQ Sbjct 121 NNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQ 180 Query 499 PTNGVGYQPYRVVVLSFELLHAPATVCGPKK 529 PTNGVGYQPYRVVVLSFELLHAPATVCGPKK Sbjct 181 PTNGVGYQPYRVVVLSFELLHAPATVCGPKK 211 >Chain B, Spike glycoprotein [Homo sapiens] Sequence ID: 8T23_B Length: 208 Range 1: 1 to 208 Score:485 bits(1124), Expect:3e-154, Method:Compositional matrix adjust., Identities:207/208(99%), Positives:208/208(100%), Gaps:0/208(0%) Query 321 QPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCY 380 QPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCY Sbjct 1 QPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCY 60 Query 381 GVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNN 440 GVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNN Sbjct 61 GVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNN 120 Query 441 LDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPT 500 LDSKVGGNYNYL+RLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPT Sbjct 121 LDSKVGGNYNYLFRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPT 180 Query 501 NGVGYQPYRVVVLSFELLHAPATVCGPK 528 NGVGYQPYRVVVLSFELLHAPATVCGPK Sbjct 181 NGVGYQPYRVVVLSFELLHAPATVCGPK 208 >Chain C, Spike protein S1 [Homo sapiens] Sequence ID: 8BG1_C Length: 199 >Chain F, Spike protein S1 [Homo sapiens] Sequence ID: 8BG1_F Length: 199 >Chain I, Spike protein S1 [Homo sapiens] Sequence ID: 8BG1_I Length: 199 >Chain L, Spike protein S1 [Homo sapiens] Sequence ID: 8BG1_L Length: 199 Range 1: 1 to 194 Score:455 bits(1054), Expect:6e-144, Method:Compositional matrix adjust., Identities:194/194(100%), Positives:194/194(100%), Gaps:0/194(0%) Query 334 NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFT 393 NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFT Sbjct 1 NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFT 60 Query 394 NVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLY 453 NVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLY Sbjct 61 NVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLY 120 Query 454 RLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL 513 RLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL Sbjct 121 RLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL 180 Query 514 SFELLHAPATVCGP 527 SFELLHAPATVCGP Sbjct 181 SFELLHAPATVCGP 194 >Chain E, Spike protein S2' [Homo sapiens] Sequence ID: 8CII_E Length: 202 Range 1: 7 to 202 Score:453 bits(1049), Expect:5e-143, Method:Compositional matrix adjust., Identities:193/196(98%), Positives:193/196(98%), Gaps:0/196(0%) Query 333 TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCF 392 TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCF Sbjct 7 TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCF 66 Query 393 TNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYL 452 TNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNY Sbjct 67 TNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYR 126 Query 453 YRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVV 512 YRLFRKSNLKPFERDISTEIYQAGS PCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVV Sbjct 127 YRLFRKSNLKPFERDISTEIYQAGSKPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVV 186 Query 513 LSFELLHAPATVCGPK 528 LSFELLHAPATVCG K Sbjct 187 LSFELLHAPATVCGKK 202 >Chain A, Spike protein S1 [Homo sapiens] Sequence ID: 7WI0_A Length: 195 Range 1: 1 to 195 Score:421 bits(975), Expect:4e-132, Method:Compositional matrix adjust., Identities:180/195(92%), Positives:184/195(94%), Gaps:0/195(0%) Query 333 TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCF 392 TNLCPF EVFNATRFASVYAWNRKRISNCVADYSVLYN A F TFKCYGVSPTKLNDLCF Sbjct 1 TNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCF 60 Query 393 TNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYL 452 TNVYADSFVIRGDEVRQIAPGQTG IADYNYKLPDDFTGCVIAWNSN LDSKV GNYNYL Sbjct 61 TNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYL 120 Query 453 YRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVV 512 YRLFRKSNLKPFERDISTEIYQAG+ PCNGV GFNCYFPL+SY F+PT GVG+QPYRVVV Sbjct 121 YRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVV 180 Query 513 LSFELLHAPATVCGP 527 LSFELLHAPATVCGP Sbjct 181 LSFELLHAPATVCGP 195 >Chain B, Spike protein S1 [Homo sapiens] Sequence ID: 7TC9_B Length: 195 Range 1: 1 to 195 Score:420 bits(973), Expect:6e-132, Method:Compositional matrix adjust., Identities:180/195(92%), Positives:184/195(94%), Gaps:0/195(0%) Query 332 ITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLC 391 ITNLCPF EVFNATRFASVYAWNRKRISNCVADYSVLYN A F TFKCYGVSPTKLNDLC Sbjct 1 ITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLC 60 Query 392 FTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNY 451 FTNVYADSFVIRGDEVRQIAPGQTG IADYNYKLPDDFTGCVIAWNSN LDSKV GNYNY Sbjct 61 FTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNY 120 Query 452 LYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVV 511 LYRLFRKSNLKPFERDISTEIYQAG+ PCNGV GFNCYFPL+SY F+PT GVG+QPYRVV Sbjct 121 LYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVV 180 Query 512 VLSFELLHAPATVCG 526 VLSFELLHAPATVCG Sbjct 181 VLSFELLHAPATVCG 195 >Chain B, Spike protein S1 [Homo sapiens] Sequence ID: 8ASY_B Length: 219 Range 1: 1 to 200 Score:417 bits(966), Expect:4e-130, Method:Compositional matrix adjust., Identities:179/200(90%), Positives:183/200(91%), Gaps:0/200(0%) Query 333 TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCF 392 TNLCPF EVFNATRFASVYAWNRKRISNCVADYSVLYN A F FKCYGVSPTKLNDLCF Sbjct 1 TNLCPFHEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCF 60 Query 393 TNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYL 452 TNVYADSFVIRG+EV QIAPGQTG IADYNYKLPDDFTGCVIAWNSN LDSKV GNYNYL Sbjct 61 TNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYL 120 Query 453 YRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVV 512 YRLFRKS LKPFERDISTEIYQAG+ PCNGV GFNCYFPLQSYGF+PT GVG+QPYRVVV Sbjct 121 YRLFRKSKLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLQSYGFRPTYGVGHQPYRVVV 180 Query 513 LSFELLHAPATVCGPKKSTN 532 LSFELLHAPATVCG K N Sbjct 181 LSFELLHAPATVCGKKSLLN 200 >Chain R, Spike protein S1 [Homo sapiens] Sequence ID: 7Y0W_R Length: 193 Range 1: 1 to 192 Score:414 bits(959), Expect:9e-130, Method:Compositional matrix adjust., Identities:177/192(92%), Positives:181/192(94%), Gaps:0/192(0%) Query 335 LCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTN 394 LCPF EVFNATRFASVYAWNRKRISNCVADYSVLYN A F TFKCYGVSPTKLNDLCFTN Sbjct 1 LCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTN 60 Query 395 VYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYR 454 VYADSFVIRGDEVRQIAPGQTG IADYNYKLPDDFTGCVIAWNSN LDSKV GNYNYLYR Sbjct 61 VYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYR 120 Query 455 LFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLS 514 LFRKSNLKPFERDISTEIYQAG+ PCNGV GFNCYFPL+SY F+PT GVG+QPYRVVVLS Sbjct 121 LFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLS 180 Query 515 FELLHAPATVCG 526 FELLHAPATVCG Sbjct 181 FELLHAPATVCG 192 >Chain A, PDCoV spike glycoprotein S1A domain [Homo sapiens] Sequence ID: 8R9X_A Length: 1079 Range 1: 545 to 1079 Score:320 bits(739), Expect:1e-86, Method:Compositional matrix adjust., Identities:194/542(36%), Positives:281/542(51%), Gaps:40/542(7%) Query 705 VAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLN 764 V+ + + IP+ F++SV TE L V + VDC Y+C ++ C LL QY S C+ + Sbjct 545 VSLYDGEVEIPSAFSLSVQTEYLQVQAEQVIVDCPQYVCNGNSRCLQLLAQYTSACSNIE 604 Query 765 RALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDF-GGFNFSQILPDPSKPSKRSFIEDLLF 823 AL A + +F Q + I +F G +NFS IL ++ RS IEDLLF Sbjct 605 AALHSSAQLDSREIINMFQTSTQSLQLANITNFKGDYNFSSILT--TRIGGRSAIEDLLF 662 Query 824 NKVTLADAGFIKQ-YGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTI 882 NKV + G + Q Y C D+A DL+C+Q +NG+ VLP ++ E +A YT +L + Sbjct 663 NKVVTSGLGTVDQDYKSCSRDMAIADLVCSQYYNGIMVLPGVVDAEKMAMYTGSLTGAMV 722 Query 883 TSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSST- 941 G T A A + R N + + NVL ENQK++A FN A+G I +LSS Sbjct 723 FGGLTAAAAIPF----ATAVQARLNYVALQTNVLQENQKILAESFNQAVGNISLALSSVN 778 Query 942 -------------ASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVE 988 A A+ K+Q VVNQ +AL+ L QLS+NF AIS+ + DI +RL++VE Sbjct 779 DAIQQTSEALNTVAIAIKKIQTVVNQQGEALSHLTAQLSNNFQAISTSIQDIYNRLEEVE 838 Query 989 AEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH 1048 A Q+DRLITGRL +L YVTQ L + ++IR S LA K++ECV QS R FCG G H Sbjct 839 ANQQVDRLITGRLAALNAYVTQLLNQMSQIRQSRLLAQQKINECVKSQSPRYGFCGNGTH 898 Query 1049 LMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHD---GKAHFPREGVFVSNGTHWFVT 1105 + S Q+AP+G+ F+H VP + + IC D G + P+ ++ N + W VT Sbjct 899 IFSLTQTAPNGIFFMHAVLVPNKFTRVNASAGICVDNTRGYSLQPQLILYQFNNS-WRVT 957 Query 1106 QRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKN---HTSP 1162 RN YEP++ + +C V + P++ + + N T P Sbjct 958 PRNMYEPRLPRQADFIQLTDCSVTFYNTTAANLPNIIPDIIDVNQTVSDIIDNLPTATPP 1017 Query 1163 DVDLG-----------DISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIK 1211 D+G +I+ + N+ + DRL NLN +L+DL+ L + E Y+K Sbjct 1018 QWDVGIYNNTILNLTVEINDLQERSKNLSQIADRLQNYIDNLNNTLVDLEWLNRVETYLK 1077 Query 1212 WP 1213 WP Sbjct 1078 WP 1079 >biogenesis of lysosomal organelles complex 1 subunit 6, partial [Homo sapiens] Sequence ID: KAI2574041.1 Length: 113 >biogenesis of lysosomal organelles complex 1 subunit 6, partial [Homo sapiens] Sequence ID: KAI4057642.1 Length: 113 Range 1: 32 to 91 Score:34.5 bits(72), Expect:4.5, Method:Composition-based stats., Identities:17/60(28%), Positives:35/60(58%), Gaps:2/60(3%) Query 1145 LDSFKEELDKYFKNHTSPDVD--LGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQE 1202 LD+ ++E+ K+ + H+ D++ + +A +VNI+KE+ L+E L + + LQ+ Sbjct 32 LDTLEQEISKFKECHSMLDINALFAEAKHYHAKLVNIRKEMLMLHEKTSKLKKRALKLQQ 91