Published October 22, 2025 | Version v2.5.1
Software Open

pmartR/pmartR: 2.5.1

Description

What's Changed

Features

  • statRes Log-FC histogram option by @leac176 in https://github.com/pmartR/pmartR/pull/355: Users can now specify plot_type to be "histogram" in plot.statRes to visualize a histogram of all Log-2 FC results from imdanova.
  • Adding color_by options and a histogram option to rmdFilt plots by @rarichardson92 in https://github.com/pmartR/pmartR/pull/356: Users can now specify hist to be "TRUE" in plot.statRes to visualize a histogram of all used rmdFilt metrics. Additionally, the color_by argument allows user to select a column in associated rmdFilt f_data to determine color.

Bugfixes/Tidying

  • Change in imdanova core specification by @clabornd in https://github.com/pmartR/pmartR/pull/353
  • Corrected color_by options of na.Res plot by @rarichardson92 in https://github.com/pmartR/pmartR/pull/354
  • Fix in imdanova for joining on main effects represented by numerics @clabornd in https://github.com/pmartR/pmartR/pull/361
  • Bugfix/volcano join by @clabornd in https://github.com/pmartR/pmartR/pull/342
  • Update to RcppArmadillo functions for compliance by @rarichardson92 in https://github.com/pmartR/pmartR/pull/363
  • v2.5.1 by @rarichardson92 in https://github.com/pmartR/pmartR/pull/364

Full Changelog: https://github.com/pmartR/pmartR/compare/v2.5.0...release-update-2.5.1

Files

pmartR/pmartR-v2.5.1.zip

Files (2.7 MB)

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Additional details

Related works

Is supplement to
Software: https://github.com/pmartR/pmartR/tree/v2.5.1 (URL)

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