sample,dataset,pnew,pold,label_time,cell_line,threePseq,total_reads,median_halflife
DMSO_1,Mabin_etal_2025_HEK293T,0.04660212015851823,0.00108391331297873,2,HEK293,FALSE,85697693,2.5603750589934045
DMSO_2,Mabin_etal_2025_HEK293T,0.04636307883870264,0.00108391331297873,2,HEK293,FALSE,86115193,2.51657437540189
DMSO_3,Mabin_etal_2025_HEK293T,0.04623491378201073,0.00108391331297873,2,HEK293,FALSE,86424875,2.5278840886966116
SRR10316942,Zuckerman_etal_2020_MCF7,0.03135099772476363,0.00111856497245691,2,MCF7,FALSE,7082374,7.55932380343919
SRR10316943,Zuckerman_etal_2020_MCF7,0.03223478059453016,0.00111856497245691,2,MCF7,FALSE,17163731,6.650659183734829
SRR10316944,Zuckerman_etal_2020_MCF7,0.0364639073336902,0.00111856497245691,4,MCF7,FALSE,6545952,4.73050306433641
SRR10316945,Zuckerman_etal_2020_MCF7,0.03613072112051507,0.00111856497245691,4,MCF7,FALSE,13030364,4.468771689731895
SRR10316946,Zuckerman_etal_2020_MCF7,0.03980481934567407,0.00111856497245691,8,MCF7,FALSE,23586060,2.9994245157847828
SRR10316947,Zuckerman_etal_2020_MCF7,0.03962569613357027,0.00111856497245691,8,MCF7,FALSE,1665481,4.384828240836361
SRR10316948,Zuckerman_etal_2020_MCF7,0.03946464612439443,0.00111856497245691,8,MCF7,FALSE,7743053,3.3508105608076337
SRR10887642,Luo_etal_2020_HEK293T,0.11787314146169262,0.00144068788122054,2,HEK293,FALSE,8473814,3.376856370527051
SRR10887643,Luo_etal_2020_HEK293T,0.11633831621162476,0.00144068788122054,2,HEK293,FALSE,10164928,3.5448469618517042
SRR10887648,Luo_etal_2020_HEK293T,0.12007204673029606,0.00144068788122054,2,HEK293,FALSE,9595593,3.609842141619185
SRR10887649,Luo_etal_2020_HEK293T,0.118787603748193,0.00144068788122054,2,HEK293,FALSE,10012465,3.5093770418916193
SRR11142916,Thiecke_etal_2020_HeLa,0.0686763393216849,0.00415350875890001,1,HeLa,TRUE,11037436,12.370385716667764
SRR11142918,Thiecke_etal_2020_HeLa,0.06656851440086183,0.00362986904069974,1,HeLa,TRUE,10317931,12.633802975552438
SRR11142920,Thiecke_etal_2020_HeLa,0.06035482459083867,0.00353312976732811,1,HeLa,TRUE,10386137,12.157179953731308
SRR12168632,Sheppard_etal_2021_CH22,0.14592368728169494,0.00279108239777821,7,CH22,TRUE,12169019,14.048584897192244
SRR12168633,Sheppard_etal_2021_CH22,0.14485415072406238,0.00260986095369649,7,CH22,TRUE,13291239,13.018521824836906
SRR12168634,Sheppard_etal_2021_CH22,0.14818288809151506,0.00262610920318543,7,CH22,TRUE,14299158,11.926731954991663
SRR13159432,Narain_etal_2021_U2OS,0.06933004543698094,0.00232179184248087,1,U2OS,TRUE,6352622,7.904933328818947
SRR13159433,Narain_etal_2021_U2OS,0.06876486463312753,0.00232179184248087,1,U2OS,TRUE,7865140,8.487777522721284
SRR13159434,Narain_etal_2021_U2OS,0.06378902101434371,0.00232179184248087,1,U2OS,TRUE,7255888,6.5084414920252405
SRR13159438,Narain_etal_2021_U2OS,0.09074566893414386,0.00232179184248087,2,U2OS,TRUE,7962251,5.1947112497247
SRR13159439,Narain_etal_2021_U2OS,0.08772433063932428,0.00232179184248087,2,U2OS,TRUE,6391936,4.755564919332129
SRR13159440,Narain_etal_2021_U2OS,0.07867977738296127,0.00232179184248087,2,U2OS,TRUE,7120517,5.060564014266529
SRR13159444,Narain_etal_2021_U2OS,0.1150728325566438,0.00232179184248087,4,U2OS,TRUE,6476965,3.5105181346119325
SRR13159445,Narain_etal_2021_U2OS,0.12047882250983671,0.00232179184248087,4,U2OS,TRUE,7076719,3.6357057492870553
SRR13159446,Narain_etal_2021_U2OS,0.1154815123439378,0.00232179184248087,4,U2OS,TRUE,6800639,3.648154425064454
SRR13573505,Finkel_etal_2021_Calu3,0.05100014598501215,0.00225965982824789,1,Calu3,FALSE,18660453,16.13802790948068
SRR13573506,Finkel_etal_2021_Calu3,0.06202938371008205,0.00225965982824789,2,Calu3,FALSE,15550209,4.763526927162962
SRR13573507,Finkel_etal_2021_Calu3,0.06300237557067123,0.00225965982824789,2,Calu3,FALSE,13983808,5.019815365224678
SRR13573508,Finkel_etal_2021_Calu3,0.06381915939543326,0.00225965982824789,3,Calu3,FALSE,24146607,3.7249137243778896
SRR13573509,Finkel_etal_2021_Calu3,0.07169503250432063,0.00225965982824789,4,Calu3,FALSE,19917721,3.157021971826913
SRR15654895,Harada_etal_2022_MV411,0.06703923657966057,4.8057014060528814e-4,1,MV411,FALSE,42812776,3.085644879073639
SRR15654896,Harada_etal_2022_MV411,0.07110331001975118,4.8057014060528814e-4,1,MV411,FALSE,47298738,3.500751100684495
SRR15654897,Harada_etal_2022_MV411,0.07187376671685705,4.8057014060528814e-4,1,MV411,FALSE,36390334,3.1698976228634073
SRR15655142,Harada_etal_2022_MV411,0.06799237804204544,4.8057014060528814e-4,1,MV411,FALSE,36272722,3.0237192299662548
SRR19981794,Swartzel_etal_2022_MOLM14,0.13042890680769956,0.00110858740191223,2,MOLM,FALSE,6917068,2.7085056347475067
SRR19981795,Swartzel_etal_2022_MOLM14,0.13897178637599525,0.00110858740191223,2,MOLM,FALSE,9192825,2.6810764174030135
SRR20080260,Ietswaart_etal_2024_K562,0.07703240880280376,0.00115019548048503,2,K562,FALSE,5888948,2.8989986872321047
SRR20080261,Ietswaart_etal_2024_K562,0.0612627066704653,0.00115019548048503,1,K562,FALSE,3718549,3.412646171067888
SRR20080283,Ietswaart_etal_2024_K562,0.07590963598061154,0.00115019548048503,2,K562,FALSE,2155548,3.1382940115555535
SRR20080284,Ietswaart_etal_2024_K562,0.06145834876879481,0.00115019548048503,1,K562,FALSE,2946371,3.675979757715537
SRR30007013,Zhou_etal_2024_HEK293T,0.087183481415519,0.00176130876077244,3,HEK293,TRUE,24783401,4.274974443594346
SRR30007014,Zhou_etal_2024_HEK293T,0.08523845388389988,0.00176130876077244,3,HEK293,TRUE,23422894,4.275545818980738
SRR30007015,Zhou_etal_2024_HEK293T,0.08907698711177606,0.00176130876077244,3,HEK293,TRUE,21596910,4.4829062528045815
SRR31699594,Williams_etal_2025_MDAMB,0.04186110683482911,0.00150567522414127,1,MDAMB,FALSE,42110004,11.606806853538986
SRR31699597,Williams_etal_2025_MDAMB,0.04450522304680009,0.00150903262876459,1,MDAMB,FALSE,41962707,10.804079210032635
SRR31699605,Williams_etal_2025_MDAMB,0.06075674156710993,0.00151969071030207,1,MDAMB,FALSE,50603045,16.180328621137956
SRR5806774,Muhar_etal_2018_many,0.13524690574260226,0.00412560616412049,1,K562,TRUE,26927135,12.946680172680708
SRR5806775,Muhar_etal_2018_many,0.12398362249486418,0.0034547022376936,1,K562,TRUE,27295807,12.628705101581918
SRR5806776,Muhar_etal_2018_many,0.12842614870862265,0.00362596221214948,1,K562,TRUE,24984716,13.6478174465794
SRR5806780,Muhar_etal_2018_many,0.11013198334375587,0.00367867241604172,1,MV411,TRUE,25465371,8.073302395752771
SRR5806781,Muhar_etal_2018_many,0.11147132355164856,0.00360032134204103,1,MV411,TRUE,19611457,7.44441029390171
SRR5806782,Muhar_etal_2018_many,0.11061526089302871,0.00343890310528924,1,MV411,TRUE,33904623,7.377201921638294
SRR5806786,Muhar_etal_2018_many,0.11405866675510697,0.0025822474953774,1,MOLM,TRUE,33874208,7.74346970557685
SRR5806787,Muhar_etal_2018_many,0.11038690225584297,0.00273283855929872,1,MOLM,TRUE,29090504,6.925094484413364
SRR5806788,Muhar_etal_2018_many,0.1043754430528006,0.00259271669255148,1,MOLM,TRUE,30164469,7.587694538373693
SRR6262128,Schofield_etal_2018_K562,0.09169461025060664,0.00301308165296804,4,K562,FALSE,2139759,6.792102525930492
SRR6262129,Schofield_etal_2018_K562,0.09065982222440318,0.00301308165296804,4,K562,FALSE,2118777,6.0284626432702275
SRR7993823,Mowery_etal_2018_Nalm6,0.1009567243214734,0.00391952029296907,5,Nalm6,FALSE,3633203,4.249162340902671
SRR7993824,Mowery_etal_2018_Nalm6,0.10874384257310205,0.0055927048869502,5,Nalm6,FALSE,4579476,3.1041890074273177
SRR7993825,Mowery_etal_2018_Nalm6,0.11487567506307876,0.00665915339643279,5,Nalm6,FALSE,6865889,2.633376474217974