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Published March 3, 2025 | Version v1
Dataset Open

Enhancing PROTAC Ternary Complex Prediction with Ligand Information in AlphaFold 3

Description

This repository contains 48 structures predicted with AlphaFold 3, reported in the publication "Enhancing PROTAC Ternary Complex Prediction with Ligand Information in AlphaFold 3" by Francisco Erazo, Nils Dunlop, Farzaneh Jalalypour, Rocío Mercado. The accompaning code is available at: https://github.com/NilsDunlop/PROTACFold/.

 

By using this information, you agree to AlphaFold 3 Output Terms of Use found at https://github.com/google-deepmind/alphafold3/blob/main/OUTPUT_TERMS_OF_USE.md.
To request access to the AlphaFold 3 model parameters, follow the process set out at https://github.com/google-deepmind/alphafold3. You may only use these if received directly from Google. Use is subject to terms of use available at https://github.com/google-deepmind/alphafold3/blob/main/WEIGHTS_TERMS_OF_USE.md.

Files

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Files (619.6 MB)

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Additional details

Software

Repository URL
https://github.com/NilsDunlop/PROTACFold/
Programming language
Python