{ "round_count": 4, "zplane_count": 1, "channel_count": 4, "file_format": "r{}_c{}.tif", "primary_metadata": { "channel_dict": {"425": 0, "488": 1, "568": 2, "647": 3} }, "aux_tilesets": { "aux_names": ["anchor_nuclei", "anchor_dots", "nuclei"] }, "is_volume": false, "decoding": { "detector_method": "blob_log", "min_sigma": 1, "max_sigma": 3, "num_sigma": 30, "default_threshold": 0.003 }, "invalid_codes": ["infeasible", "background", "nan", "NaN"], "empty_barcodes": ["Fake1", "Fake2", "Fake3", "Fake4", "Fake5","Fake6", "Fake7", "Fake8", "Fake9", "Fake10"], "total_number_genes": 50, "MICROM_PER_PX": 0.1625, "desired_genes": ["Adra1b", "Penk", "Rorb", "Cux2", "Sstr1"], "expected_accuracy" : 0.01 }