Published February 17, 2025 | Version v3
Dataset Open

HOCOMOCO v13 collection of transcription factor binding motifs

  • 1. ROR icon Vavilov Institute of General Genetics

Description

This dataset contains entire HOCOMOCO v13 collection of DNA binding motifs for human and mouse transcription factors.

Data for the previous version HOCOMOCO v12 is also available at Zenodo. See also HOCOMOCO v12 paper.

Novel (relative to v12) motifs were obtained as a part of Codebook MEX project.

Supplementary files

This zenodo record contains motif annotation bundles for hocomoco10, hocomoco11, hocomoco12. They allow one to trace origin of motifs inherited from older versions (v9→v10→v11→v12→v13). Each bundle allows to link a motif to the same motif from the previous collection. Previous motif names are extracted in a separate file `previous_motif_names.json`.

Files

previous_motif_names.json

Files (2.9 GB)

Name Size Download all
md5:3b30a831b904c6c73733abde838c8273
646.1 kB Download
md5:19619bdced526dc61c95b50948c9d262
2.0 MB Download
md5:4b48cf28040ddd0c9a536aecf8a9aade
45.1 MB Download
md5:fe0ede1d96233260901ed4088cd5bfe9
2.9 GB Download
md5:311d35ad0f0d6704f55befd2e12bb5ed
299.0 kB Preview Download