Preview

Arcadia-Science-2024-ProteinCartography-dCK-validation-4e1009a
- .github
  - PULL_REQUEST_TEMPLATE.md
    
    845 Bytes
  - workflows
    - lint.yml
      
      592 Bytes
- .gitignore
  
  938 Bytes
- .pre-commit-config.yaml
  
  687 Bytes
- .vscode
  - extensions.json
    
    163 Bytes
- LICENSE
  
  1.1 kB
- Makefile
  
  164 Bytes
- README.md
  
  13.6 kB
- envs
  - dev.yml
    
    352 Bytes
- finding_representatives
  - cluster_representatives
    - find_cluster_representative.py
      
      4.5 kB
  - input_files
    - all_by_all_tmscore_pivoted.tsv
      
      37.9 MB
    - leiden_features.tsv
      
      35.1 kB
  - subcluster_representatives
    - run_elbow_method.py
      
      4.4 kB
    - run_k_means_clustering.py
      
      4.2 kB
- plotting
  - FPLC
    - Almond_A0A4Y1QVV5
      - A0A4Y1QVV5_SEC.tsv
        
        10.7 kB
    - Antarctic_cod_A0A7J5YK87
      - A0A7J5YK87_SEC.tsv
        
        10.0 kB
    - Field_mustard_A0A3P6ASY1
      - A0A3P6ASY1_SEC.tsv
        
        10.9 kB
    - Rickettsiales_A0A2A5BCG8
      - A0A2A5BCG8_SEC.tsv
        
        10.7 kB
    - Standards
      - SEC_standards.tsv
        
        11.8 kB
    - human_dCK_P27707
      - P27707_SEC.tsv
        
        12.1 kB
    - prep_trace_graph.py
      
      2.0 kB
  - heatmap
    - dNKs_activities.tsv
      
      1.4 kB
    - prep_heatmap.py
      
      3.5 kB
  - sankey_plot
    - prep_sankey_plot.py
      
      3.2 kB
    - sankey_data.tsv
      
      384 Bytes
- pyproject.toml
  
  1.1 kB

Arcadia-Science/2024-ProteinCartography-dCK-validation-v1.0.zip