R/CutthroatAL.R
CutthroatAL.Rd
Individual capture histories of Cutthroat Trout (Oncorhynchus clarki) in Auke Lake, Alaska, from samples taken in 1998-2006.
A data frame with 1684 observations on the following 10 variables.
Unique identification numbers for each fish
Indicator variable for whether the fish was captured in 1998 (1
=captured)
Indicator variable for whether the fish was captured in 1999 (1
=captured)
Indicator variable for whether the fish was captured in 2000 (1
=captured)
Indicator variable for whether the fish was captured in 2001 (1
=captured)
Indicator variable for whether the fish was captured in 2002 (1
=captured)
Indicator variable for whether the fish was captured in 2003 (1
=captured)
Indicator variable for whether the fish was captured in 2004 (1
=captured)
Indicator variable for whether the fish was captured in 2005 (1
=captured)
Indicator variable for whether the fish was captured in 2006 (1
=captured)
From Appendix A.3 of Harding, R.D., C.L. Hoover, and R.P. Marshall. 2010. Abundance of Cutthroat Trout in Auke Lake, Southeast Alaska, in 2005 and 2006. Alaska Department of Fish and Game Fisheries Data Series No. 10-82. [Was (is?) from http://www.sf.adfg.state.ak.us/FedAidPDFs/FDS10-82.pdf.]
Entered into “RMark” format (see CutthroatALf
in FSAdata) and then converted to individual format with capHistConvert
Population Size
Abundance
Mark-Recapture
Capture-Recapture
Jolly-Seber
Capture History
Used in mrOpen
examples.
str(CutthroatAL)#> 'data.frame': 1684 obs. of 10 variables: #> $ id : int 1 2 3 4 5 6 7 8 9 10 ... #> $ y1998: int 0 0 0 0 0 0 0 0 0 0 ... #> $ y1999: int 0 0 0 0 0 0 0 0 0 0 ... #> $ y2000: int 0 0 0 0 0 0 0 0 0 0 ... #> $ y2001: int 0 0 0 0 0 0 0 0 0 0 ... #> $ y2002: int 0 0 0 0 0 0 0 0 0 0 ... #> $ y2003: int 0 0 0 0 0 0 0 0 0 0 ... #> $ y2004: int 0 0 0 0 0 0 0 0 0 0 ... #> $ y2005: int 0 0 0 0 0 0 0 0 0 0 ... #> $ y2006: int 1 1 1 1 1 1 1 1 1 1 ...head(CutthroatAL)#> id y1998 y1999 y2000 y2001 y2002 y2003 y2004 y2005 y2006 #> 1 1 0 0 0 0 0 0 0 0 1 #> 2 2 0 0 0 0 0 0 0 0 1 #> 3 3 0 0 0 0 0 0 0 0 1 #> 4 4 0 0 0 0 0 0 0 0 1 #> 5 5 0 0 0 0 0 0 0 0 1 #> 6 6 0 0 0 0 0 0 0 0 1