griffithlab/pVACtools-v5.1.0.zip
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griffithlab-pVACtools-5724ca5
.DS_Store
10.2 kB
.github
ISSUE_TEMPLATE
bug_report.yml
2.0 kB
workflows
api_status.yml
3.8 kB
tests.yml
1.9 kB
vacation_autoreply.yml
613 Bytes
.gitignore
268 Bytes
.readthedocs.yaml
585 Bytes
HCC1395_inputs.zip
25.4 MB
LICENSE
1.7 kB
README.md
5.2 kB
api_status_tests
blast_response.xml
4.7 kB
iedb_class_i_response.tsv
710 Bytes
iedb_class_ii_response.tsv
801 Bytes
netchop_response.html
1.6 kB
netmhcstab_response.html
2.7 kB
test_blast.py
1.1 kB
test_iedb.py
2.2 kB
test_netchop.py
1.0 kB
test_netmhc_stab.py
997 Bytes
docs
Makefile
7.6 kB
citation.rst
2.0 kB
conf.py
10.9 kB
contact.rst
295 Bytes
contribute.rst
5.7 kB
courses.rst
223 Bytes
frequently_asked_questions.rst
2.6 kB
funding.rst
215 Bytes
images
.DS_Store
8.2 kB
output_file_columns.png
168.3 kB
pVACapi_logo_trans-bg_sm_v4b.png
4.7 kB
pVACapi_logo_trans-bg_v4b.png
30.8 kB
pVACbind_logo_trans-bg_sm_v4b.png
5.2 kB
pVACbind_logo_trans-bg_v4b.png
33.9 kB
pVACfuse_logo_trans-bg_sm_v4b.png
4.9 kB
pVACfuse_logo_trans-bg_v4b.png
33.4 kB
pVACseq_logo_trans-bg_sm_v4b.png
4.6 kB
pVACseq_logo_trans-bg_v4b.png
32.0 kB
pVACsplice_logo_trans-bg_v4b.png
55.6 kB
pVACtools_favicon_v1a.png
2.0 kB
pVACtools_favicon_v1b.png
2.1 kB
pVACtools_logo_200px_v1a.png
3.5 kB
pVACtools_main-figure_v7.png
396.4 kB
pVACtools_main-figure_v8.png
506.7 kB
pVACvector_logo_trans-bg_sm_v4b.png
5.3 kB
pVACvector_logo_trans-bg_v4b.png
36.6 kB
pVACview_logo_trans-bg_sm_v4b.png
3.7 kB
pVACview_logo_trans-bg_v4b.png
50.2 kB
pVACviz_logo_trans-bg_sm_v4b.png
19.1 kB
screenshots
pvacapi-directories.png
17.8 kB
pvacview-additional_info_1.png
69.4 kB
pvacview-additional_info_2.png
228.7 kB
pvacview-additional_info_3.png
59.9 kB
pvacview-additional_info_4.png
124.0 kB
pvacview-additional_info_5.png
46.1 kB
pvacview-comments.png
21.9 kB
pvacview-custom-detaileddatatable-neopredpipe.png
150.7 kB
pvacview-custom-dynamicscatter-neopredpipe.png
148.6 kB
pvacview-custom-dynamicscatter-vaxrank.png
164.7 kB
pvacview-custom-investigate-vaxrank.png
240.9 kB
pvacview-custom-maintable-neopredpipe.png
121.1 kB
pvacview-custom-tables-vaxrank.png
267.5 kB
pvacview-custom-upload-vaxrank.png
155.3 kB
pvacview-export.png
630.2 kB
pvacview-main_table.png
463.7 kB
pvacview-middle_section.png
172.7 kB
pvacview-neofox-dynamic-scatter.png
200.0 kB
pvacview-neofox-dynamicscatterplot_selected.png
189.7 kB
pvacview-neofox-evaluation.png
463.4 kB
pvacview-neofox-export.png
372.1 kB
pvacview-neofox-maintable.png
395.9 kB
pvacview-neofox-table-violinplot.png
861.3 kB
pvacview-neofox-upload.png
110.6 kB
pvacview-neofox-violin-two.png
668.6 kB
pvacview-neofox-violinplots_selected.png
864.5 kB
pvacview-neopredpipe-table.png
278.3 kB
pvacview-peptide_table.png
112.9 kB
pvacview-regenerate_tier.png
178.2 kB
pvacview-transcript_set.png
214.2 kB
pvacview-upload.png
652.5 kB
pvacview-variant_data_add.png
34.3 kB
pvacview-visualize_and_explore.png
542.3 kB
pvacviz-detail.png
315.7 kB
pvacviz-manage-list.png
80.7 kB
pvacviz-start.png
97.2 kB
pvacviz-visualize-list.png
122.5 kB
pvacviz-visualize.png
398.2 kB
vignette
ADAR
ADAR_0.png
173.9 kB
TranscriptSet1
ADAR_10_ElutionAndImmunogenicityData_TranscriptSet1.png
109.1 kB
ADAR_1_TranscriptSetsOfSelectedVariant_TranscriptSet1.png
88.2 kB
ADAR_2_1_TranscriptSet1.png
111.9 kB
ADAR_2_2_TranscriptSet1.png
67.9 kB
ADAR_3_TranscriptSet1.png
202.3 kB
ADAR_4_ReferenceMatches_TranscriptSet1.png
90.3 kB
ADAR_5_AnchorHeatmap_TranscriptSet1.png
1.1 MB
ADAR_5_AnchorWeight2_TranscriptSet1.png
76.1 kB
ADAR_5_AnchorWeight_TranscriptSet1.png
118.9 kB
ADAR_7_IC50plot_TranscriptSet1.png
88.1 kB
ADAR_8_percentilePlot_TranscriptSet1.png
231.9 kB
ADAR_9_BindingData_TranscriptSet1.png
62.0 kB
TranscriptSet2
ADAR_2_TranscriptSet2.png
45.7 kB
ADAR_3_TranscriptSet2.png
197.8 kB
Screen Shot 2024-03-29 at 1.46.05 AM.png
122.1 kB
Screen Shot 2024-03-29 at 1.46.46 AM.png
77.8 kB
Screen Shot 2024-03-29 at 2.06.12 AM.png
109.2 kB
Screen Shot 2024-03-29 at 2.08.37 AM.png
256.6 kB
Screen Shot 2024-03-29 at 2.09.24 AM.png
91.5 kB
Screen Shot 2024-03-29 at 2.09.41 AM.png
95.3 kB
Screen Shot 2024-03-29 at 2.09.55 AM.png
62.6 kB
Screen Shot 2024-03-29 at 2.10.07 AM.png
108.9 kB
KIF1C-new
KIF1C_0.png
465.6 kB
KIF1C_10_ElutionAndImmunogenicityData.png
107.4 kB
KIF1C_11_Decision.png
174.0 kB
KIF1C_1_TranscriptSetsOfSelectedVariant.png
75.9 kB
KIF1C_2_ReferenceMatches.png
93.6 kB
KIF1C_3_AdditionalData.png
82.5 kB
KIF1C_4_PeptidesTranscriptSet.png
197.4 kB
KIF1C_5_AnchorHeatmap.png
603.0 kB
KIF1C_5_AnchorHeatmap_2.png
295.9 kB
KIF1C_6_TranscriptsInSet.png
50.4 kB
KIF1C_7_IC50plot.png
110.2 kB
KIF1C_8_percentilePlot.png
231.2 kB
KIF1C_9_BindingData.png
65.6 kB
ZNF141
10_ElutionAndImmunogenicityData.png
107.0 kB
1_TranscriptSetsOfSelectedVariant.png
75.5 kB
2_ReferenceMatches.png
133.3 kB
3_AdditionalData.png
81.5 kB
4_PeptidesTranscriptSet.png
55.1 kB
5_AnchorHeatmap.png
304.8 kB
6_TranscriptsInSet.png
50.6 kB
7_IC50plot.png
109.8 kB
8_percentilePlot.png
108.5 kB
9_BindingData.png
68.4 kB
ZNF141_0.png
460.2 kB
originalParametersForTiering
pvacview-OG_params_1.png
37.5 kB
pvacview-OG_params_2.png
35.4 kB
pvacview-OG_params_3.png
30.9 kB
pvacview-advancedOption.png
114.4 kB
pvacview-aggrReportTable_withCGCgenesHighlighted.png
465.3 kB
pvacview-export.png
269.8 kB
pvacview-loadDemoDataset.png
174.5 kB
pvacview-mainviewDemodataset.png
467.2 kB
vaxrank_table.png
250.7 kB
vector.jpg
653.9 kB
index.rst
8.4 kB
install.rst
10.7 kB
license.rst
2.2 kB
mailing_list.rst
250 Bytes
make.bat
7.7 kB
pvacbind
additional_commands.rst
798 Bytes
features.rst
6.8 kB
filter_commands.rst
3.5 kB
getting_started.rst
704 Bytes
optional_downstream_analysis_tools.rst
5.0 kB
output_files.rst
12.1 kB
prerequisites.rst
246 Bytes
run.rst
500 Bytes
pvacbind.rst
502 Bytes
pvacfuse
additional_commands.rst
1.0 kB
features.rst
7.2 kB
filter_commands.rst
4.8 kB
getting_started.rst
983 Bytes
optional_downstream_analysis_tools.rst
6.7 kB
output_files.rst
15.1 kB
prerequisites.rst
2.0 kB
run.rst
611 Bytes
pvacfuse.rst
787 Bytes
pvacseq
additional_commands.rst
1.3 kB
errors.rst
9.0 kB
features.rst
8.4 kB
filter_commands.rst
11.2 kB
frequently_asked_questions.rst
10.7 kB
getting_started.rst
3.3 kB
input_file_prep
expression.rst
3.7 kB
gt.rst
2.0 kB
proximal_vcf.rst
5.5 kB
readcounts.rst
6.9 kB
vep.rst
4.7 kB
input_file_prep.rst
840 Bytes
optional_downstream_analysis_tools.rst
8.2 kB
output_files.rst
26.3 kB
run.rst
606 Bytes
pvacseq.rst
1.1 kB
pvacsplice
additional_commands.rst
617 Bytes
features.rst
7.6 kB
filter_commands.rst
5.6 kB
getting_started.rst
904 Bytes
input_file_prep.rst
1.7 kB
optional_downstream_analysis_tools.rst
7.2 kB
output_files.rst
21.9 kB
run.rst
587 Bytes
pvacsplice.rst
531 Bytes
pvacvector
additional_commands.rst
1.6 kB
getting_started.rst
1.3 kB
output_files.rst
2.0 kB
prerequisites.rst
1.1 kB
run.rst
4.4 kB
pvacvector.rst
3.8 kB
pvacview
custom_module
custom_features.rst
2.0 kB
custom_upload.rst
3.0 kB
custom_module.rst
1.6 kB
neofox_module
neofox_features.rst
2.8 kB
neofox_upload.rst
4.5 kB
neofox_module.rst
725 Bytes
prerequisites.rst
4.6 kB
pvacseq_module
pvacseq_features.rst
11.4 kB
pvacseq_upload.rst
11.0 kB
pvacseq_vignette.rst
24.8 kB
pvacseq_module.rst
293 Bytes
troubleshooting.rst
3.8 kB
pvacview.rst
1.2 kB
releases
1_0.rst
4.6 kB
1_1.rst
4.5 kB
1_2.rst
1.1 kB
1_3.rst
7.0 kB
1_4.rst
3.6 kB
1_5.rst
13.0 kB
2_0.rst
8.8 kB
3_0.rst
6.4 kB
3_1.rst
2.1 kB
4_0.rst
8.6 kB
4_1.rst
3.2 kB
4_2.rst
1.4 kB
4_3.rst
3.0 kB
4_4.rst
2.5 kB
5_0.rst
2.9 kB
releases.rst
324 Bytes
requirements.before_install.txt
19 Bytes
requirements.txt
91 Bytes
tools.rst
5.6 kB
pvactools
lib
__init__.py
653 Bytes
aggregate_all_epitopes.py
64.9 kB
allele_specific_binding_filter.py
3.2 kB
allele_specific_cutoffs.py
792 Bytes
binding_filter.py
5.8 kB
calculate_manufacturability.py
3.1 kB
calculate_reference_proteome_similarity.py
32.5 kB
call_iedb.py
2.6 kB
call_mhcnuggets.py
3.4 kB
combine_inputs.py
4.0 kB
combine_parsed_outputs.py
2.3 kB
csq_parser.py
1.5 kB
download_example_data.py
955 Bytes
fasta_generator.py
25.1 kB
fasta_to_kmers.py
5.5 kB
filter.py
1.7 kB
filter_regtools_results.py
5.0 kB
identify_problematic_amino_acids.py
6.2 kB
input_file_converter.py
45.9 kB
junction_to_fasta.py
11.4 kB
load_gtf_data.py
2.1 kB
net_chop.py
12.3 kB
netmhc_stab.py
12.3 kB
optimal_peptide.py
3.4 kB
output_parser.py
63.7 kB
pipeline.py
40.4 kB
post_processor.py
16.9 kB
prediction_class.py
29.8 kB
prediction_class_utils.py
2.9 kB
print_log.py
2.1 kB
proximal_variant.py
7.6 kB
pvacvector_input_fasta_generator.py
5.8 kB
run_argument_parser.py
21.7 kB
run_utils.py
5.2 kB
sort.py
2.6 kB
splice_pipeline.py
9.9 kB
top_score_filter.py
22.4 kB
valid_algorithms.py
2.5 kB
valid_alleles.py
1.4 kB
vector_visualization.py
9.7 kB
tools
.DS_Store
8.2 kB
__init__.py
73 Bytes
download_cwls.py
1.1 kB
download_wdls.py
985 Bytes
main.py
1.4 kB
pvacbind
__init__.py
349 Bytes
allele_specific_cutoffs.py
377 Bytes
binding_filter.py
495 Bytes
calculate_reference_proteome_similarity.py
734 Bytes
download_example_data.py
376 Bytes
example_data
input.fasta
3.4 kB
results
MHC_Class_I
Test.all_epitopes.aggregated.tsv
2.7 kB
Test.all_epitopes.tsv
6.4 MB
Test.filtered.tsv
8.8 kB
MHC_Class_II
Test.all_epitopes.aggregated.tsv
2.9 kB
Test.all_epitopes.tsv
538.1 kB
Test.filtered.tsv
3.9 kB
combined
Test.all_epitopes.aggregated.tsv
2.9 kB
Test.all_epitopes.tsv
7.6 MB
Test.filtered.tsv
10.4 kB
generate_aggregated_report.py
3.5 kB
identify_problematic_amino_acids.py
484 Bytes
main.py
3.7 kB
net_chop.py
379 Bytes
netmhc_stab.py
394 Bytes
run.py
7.6 kB
top_score_filter.py
421 Bytes
valid_algorithms.py
359 Bytes
valid_alleles.py
358 Bytes
pvacfuse
__init__.py
402 Bytes
allele_specific_cutoffs.py
377 Bytes
binding_filter.py
495 Bytes
calculate_reference_proteome_similarity.py
734 Bytes
coverage_filter.py
1.8 kB
download_example_data.py
375 Bytes
example_data
agfusion
.DS_Store
6.1 kB
ABCA12-214978607_EXTL2-100874375
ABCA12-EXTL2.exons.txt
2.7 kB
ABCA12-EXTL2.fusion_transcripts.txt
249 Bytes
ABCA12-EXTL2.protein_domains.txt
817 Bytes
ABCA12-EXTL2_cdna.fa
7.4 kB
ABCA12-EXTL2_cds.fa
5.6 kB
ABCA12-EXTL2_protein.fa
1.9 kB
ENST00000272895-ENST00000370114.exon.png
14.7 kB
ENST00000272895-ENST00000370114.png
21.7 kB
AC000095.12-19014506_GNAS-58895612
AC000095.12-GNAS.exons.txt
1.4 kB
AC000095.12-GNAS.fusion_transcripts.txt
238 Bytes
AC000095.12-GNAS.protein_domains.txt
111 Bytes
AC000095.12-GNAS_cdna.fa
2.2 kB
AC003991.3-88219548_CTB-167B5.1-88218781
AC003991.3-CTB-167B5.1.exons.txt
102 Bytes
AC003991.3-CTB-167B5.1.fusion_transcripts.txt
245 Bytes
AC003991.3-CTB-167B5.1.protein_domains.txt
111 Bytes
AC003991.3-CTB-167B5.1_cdna.fa
89 Bytes
AGAP12P-48031376_FAM134C-42592162
AGAP12P-FAM134C.exons.txt
813 Bytes
AGAP12P-FAM134C.fusion_transcripts.txt
251 Bytes
AGAP12P-FAM134C.protein_domains.txt
111 Bytes
AGAP12P-FAM134C_cdna.fa
3.9 kB
AMD1-110875215_REV3L-111368028
AMD1-REV3L.exons.txt
1.6 kB
AMD1-REV3L.fusion_transcripts.txt
258 Bytes
AMD1-REV3L.protein_domains.txt
539 Bytes
AMD1-REV3L_cdna.fa
5.2 kB
AMD1-REV3L_cds.fa
3.9 kB
AMD1-REV3L_protein.fa
1.4 kB
ENST00000368885-ENST00000358835.exon.png
13.9 kB
ENST00000368885-ENST00000358835.png
17.9 kB
BTBD8-92102669_ELAVL4-50200851
BTBD8-ELAVL4.exons.txt
402 Bytes
BTBD8-ELAVL4.fusion_transcripts.txt
248 Bytes
BTBD8-ELAVL4.protein_domains.txt
190 Bytes
BTBD8-ELAVL4_cdna.fa
1.5 kB
BTBD8-ELAVL4_cds.fa
953 Bytes
BTBD8-ELAVL4_protein.fa
352 Bytes
ENST00000342818-ENST00000357083.exon.png
13.1 kB
ENST00000342818-ENST00000357083.png
12.4 kB
CBFA2T2-33562674_CHMP4B-33848467
CBFA2T2-CHMP4B.exons.txt
492 Bytes
CBFA2T2-CHMP4B.fusion_transcripts.txt
230 Bytes
CBFA2T2-CHMP4B.protein_domains.txt
111 Bytes
CBFA2T2-CHMP4B_cdna.fa
1.8 kB
CDC37L1-4688606_BTG3-17609152
CDC37L1-BTG3.exons.txt
701 Bytes
CDC37L1-BTG3.fusion_transcripts.txt
248 Bytes
CDC37L1-BTG3.protein_domains.txt
111 Bytes
CDC37L1-BTG3_cdna.fa
2.2 kB
CDC37L1-BTG3_cds.fa
1.5 kB
CDC37L1-BTG3_protein.fa
333 Bytes
ENST00000381854-ENST00000339775.exon.png
14.2 kB
ENST00000381854-ENST00000339775.png
12.3 kB
CEP192-13069856_TMEM260-56621531
CEP192-TMEM260.exons.txt
2.7 kB
CEP192-TMEM260.fusion_transcripts.txt
263 Bytes
CEP192-TMEM260.protein_domains.txt
111 Bytes
CEP192-TMEM260_cdna.fa
8.4 kB
CEP192-TMEM260_cds.fa
6.2 kB
CEP192-TMEM260_protein.fa
2.2 kB
ENST00000506447-ENST00000261556.exon.png
15.8 kB
ENST00000506447-ENST00000261556.png
13.1 kB
CLEC16A-10973061_RMI2-11350642
CLEC16A-RMI2.exons.txt
710 Bytes
CLEC16A-RMI2.fusion_transcripts.txt
248 Bytes
CLEC16A-RMI2.protein_domains.txt
209 Bytes
CLEC16A-RMI2_cdna.fa
2.2 kB
CLEC16A-RMI2_cds.fa
958 Bytes
CLEC16A-RMI2_protein.fa
420 Bytes
ENST00000409790-ENST00000312499.exon.png
14.4 kB
ENST00000409790-ENST00000312499.png
12.9 kB
CLUAP1-3538855_NLRC3-3539409
CLUAP1-NLRC3.exons.txt
1.1 kB
CLUAP1-NLRC3.fusion_transcripts.txt
244 Bytes
CLUAP1-NLRC3.protein_domains.txt
209 Bytes
CLUAP1-NLRC3_cdna.fa
4.5 kB
CLUAP1-NLRC3_cds.fa
1.3 kB
CLUAP1-NLRC3_protein.fa
574 Bytes
ENST00000576634-ENST00000359128.exon.png
13.6 kB
ENST00000576634-ENST00000359128.png
12.6 kB
CNIH1-54441247_KTN1-55601757
CNIH1-KTN1.exons.txt
3.4 kB
CNIH1-KTN1.fusion_transcripts.txt
243 Bytes
CNIH1-KTN1.protein_domains.txt
328 Bytes
CNIH1-KTN1_cdna.fa
5.0 kB
CNIH1-KTN1_cds.fa
4.3 kB
CNIH1-KTN1_protein.fa
1.6 kB
ENST00000216416-ENST00000395314.exon.png
14.0 kB
ENST00000216416-ENST00000395314.png
15.1 kB
COX7A1-36150952_CAPNS1-36150048
COX7A1-CAPNS1.exons.txt
488 Bytes
COX7A1-CAPNS1.fusion_transcripts.txt
243 Bytes
COX7A1-CAPNS1.protein_domains.txt
280 Bytes
COX7A1-CAPNS1_cdna.fa
1.2 kB
COX7A1-CAPNS1_cds.fa
312 Bytes
COX7A1-CAPNS1_protein.fa
234 Bytes
ENST00000292907-ENST00000246533.exon.png
13.5 kB
ENST00000292907-ENST00000246533.png
14.4 kB
CRYBG3-97843261_CD47-108071182
CRYBG3-CD47.exons.txt
936 Bytes
CRYBG3-CD47.fusion_transcripts.txt
247 Bytes
CRYBG3-CD47.protein_domains.txt
111 Bytes
CRYBG3-CD47_cdna.fa
1.3 kB
CRYBG3-CD47_cds.fa
867 Bytes
CRYBG3-CD47_protein.fa
282 Bytes
ENST00000389622-ENST00000361309.exon.png
14.7 kB
ENST00000389622-ENST00000361309.png
12.5 kB
CTD-2201E18.3-43067032_ZNF131-43068033
CTD-2201E18.3-ZNF131.exons.txt
102 Bytes
CTD-2201E18.3-ZNF131.fusion_transcripts.txt
256 Bytes
CTD-2201E18.3-ZNF131.protein_domains.txt
111 Bytes
CTD-2201E18.3-ZNF131_cdna.fa
89 Bytes
CTD-2201E18.3-43067257_ZNF131-43067738
CTD-2201E18.3-ZNF131.exons.txt
102 Bytes
CTD-2201E18.3-ZNF131.fusion_transcripts.txt
256 Bytes
CTD-2201E18.3-ZNF131.protein_domains.txt
111 Bytes
CTD-2201E18.3-ZNF131_cdna.fa
89 Bytes
CTD-2201E18.3-43067264_ZNF131-43067731
CTD-2201E18.3-ZNF131.exons.txt
102 Bytes
CTD-2201E18.3-ZNF131.fusion_transcripts.txt
256 Bytes
CTD-2201E18.3-ZNF131.protein_domains.txt
111 Bytes
CTD-2201E18.3-ZNF131_cdna.fa
89 Bytes
CTD-2368P22.1-58003336_ZNF667-AS1-56494163
CTD-2368P22.1-ZNF667-AS1.exons.txt
366 Bytes
CTD-2368P22.1-ZNF667-AS1.fusion_transcripts.txt
228 Bytes
CTD-2368P22.1-ZNF667-AS1.protein_domains.txt
111 Bytes
CTD-2368P22.1-ZNF667-AS1_cdna.fa
2.7 kB
DNAJC7-42013100_CDK17-96297851
DNAJC7-CDK17.exons.txt
946 Bytes
DNAJC7-CDK17.fusion_transcripts.txt
238 Bytes
DNAJC7-CDK17.protein_domains.txt
111 Bytes
DNAJC7-CDK17_cdna.fa
3.3 kB
DNAJC7-CDK17_cds.fa
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DNAJC7-CDK17_protein.fa
190 Bytes
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ENST00000457167-ENST00000261211.png
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DNAJC7-42013106_CDK17-96297857
DNAJC7-CDK17.exons.txt
946 Bytes
DNAJC7-CDK17.fusion_transcripts.txt
238 Bytes
DNAJC7-CDK17.protein_domains.txt
111 Bytes
DNAJC7-CDK17_cdna.fa
3.3 kB
DNAJC7-CDK17_cds.fa
1.0 kB
DNAJC7-CDK17_protein.fa
190 Bytes
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ENST00000457167-ENST00000261211.png
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GMPR2-24239181_TINF2-24239754
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ENST00000557854-ENST00000267415.png
12.4 kB
GMPR2-TINF2.exons.txt
777 Bytes
GMPR2-TINF2.fusion_transcripts.txt
242 Bytes
GMPR2-TINF2.protein_domains.txt
324 Bytes
GMPR2-TINF2_cdna.fa
2.2 kB
GMPR2-TINF2_cds.fa
1.4 kB
GMPR2-TINF2_protein.fa
587 Bytes
GOLGA8A-34404917_U2SURP-143019969
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102 Bytes
GOLGA8A-U2SURP.fusion_transcripts.txt
247 Bytes
GOLGA8A-U2SURP.protein_domains.txt
111 Bytes
GOLGA8A-U2SURP_cdna.fa
89 Bytes
HBS1L-134986736_BCAS3-60924407
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ENST00000367837-ENST00000390652.png
16.4 kB
HBS1L-BCAS3.exons.txt
1.9 kB
HBS1L-BCAS3.fusion_transcripts.txt
243 Bytes
HBS1L-BCAS3.protein_domains.txt
407 Bytes
HBS1L-BCAS3_cdna.fa
4.2 kB
HBS1L-BCAS3_cds.fa
3.2 kB
HBS1L-BCAS3_protein.fa
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LCORL-17961903_GNAS-58895612
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14.4 kB
ENST00000382226-ENST00000371100.png
13.4 kB
LCORL-GNAS.exons.txt
1.3 kB
LCORL-GNAS.fusion_transcripts.txt
258 Bytes
LCORL-GNAS.protein_domains.txt
202 Bytes
LCORL-GNAS_cdna.fa
2.1 kB
LCORL-GNAS_cds.fa
1.6 kB
LCORL-GNAS_protein.fa
668 Bytes
LINC01224-23415904_SLC44A5-75203833
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102 Bytes
LINC01224-SLC44A5.fusion_transcripts.txt
243 Bytes
LINC01224-SLC44A5.protein_domains.txt
111 Bytes
LINC01224-SLC44A5_cdna.fa
89 Bytes
LLNLR-285B5.1-56494163_ZNF606-58003336
LLNLR-285B5.1-ZNF606.exons.txt
774 Bytes
LLNLR-285B5.1-ZNF606.fusion_transcripts.txt
244 Bytes
LLNLR-285B5.1-ZNF606.protein_domains.txt
111 Bytes
LLNLR-285B5.1-ZNF606_cdna.fa
4.6 kB
LRFN5-41767029_CTD-2307P3.1-42394945
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512 Bytes
LRFN5-CTD-2307P3.1.fusion_transcripts.txt
237 Bytes
LRFN5-CTD-2307P3.1.protein_domains.txt
111 Bytes
LRFN5-CTD-2307P3.1_cdna.fa
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MASP2-11026646_TARDBP-11026017
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13.9 kB
ENST00000400897-ENST00000240185.png
16.5 kB
MASP2-TARDBP.exons.txt
1.0 kB
MASP2-TARDBP.fusion_transcripts.txt
243 Bytes
MASP2-TARDBP.protein_domains.txt
620 Bytes
MASP2-TARDBP_cdna.fa
2.9 kB
MASP2-TARDBP_cds.fa
2.2 kB
MASP2-TARDBP_protein.fa
851 Bytes
MAX-65093708_TMEM260-56585001
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14.3 kB
ENST00000358664-ENST00000261556.png
11.4 kB
MAX-TMEM260.exons.txt
1.5 kB
MAX-TMEM260.fusion_transcripts.txt
237 Bytes
MAX-TMEM260.protein_domains.txt
209 Bytes
MAX-TMEM260_cdna.fa
4.5 kB
MAX-TMEM260_cds.fa
2.2 kB
MAX-TMEM260_protein.fa
207 Bytes
MED15P1-18912932_IGLJ1-22893781
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795 Bytes
MED15P1-IGLJ1.fusion_transcripts.txt
244 Bytes
MED15P1-IGLJ1.protein_domains.txt
111 Bytes
MED15P1-IGLJ1_cdna.fa
1.1 kB
MED15P1-18912932_IGLL5-22893781
MED15P1-IGLL5.exons.txt
872 Bytes
MED15P1-IGLL5.fusion_transcripts.txt
249 Bytes
MED15P1-IGLL5.protein_domains.txt
111 Bytes
MED15P1-IGLL5_cdna.fa
1.5 kB
MED31-6643335_RFC1-39345442
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15.0 kB
ENST00000225728-ENST00000381897.png
12.8 kB
MED31-RFC1.exons.txt
2.1 kB
MED31-RFC1.fusion_transcripts.txt
246 Bytes
MED31-RFC1.protein_domains.txt
180 Bytes
MED31-RFC1_cdna.fa
6.4 kB
MED31-RFC1_cds.fa
3.8 kB
MED31-RFC1_protein.fa
313 Bytes
MIPOL1-37247907_PGAP1-196875821
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14.3 kB
ENST00000327441-ENST00000354764.png
11.1 kB
MIPOL1-PGAP1.exons.txt
1.5 kB
MIPOL1-PGAP1.fusion_transcripts.txt
238 Bytes
MIPOL1-PGAP1.protein_domains.txt
111 Bytes
MIPOL1-PGAP1_cdna.fa
10.4 kB
MIPOL1-PGAP1_cds.fa
1.5 kB
MIPOL1-PGAP1_protein.fa
160 Bytes
MTFR1-65719529_PDE7A-65719345
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102 Bytes
MTFR1-PDE7A.fusion_transcripts.txt
244 Bytes
MTFR1-PDE7A.protein_domains.txt
111 Bytes
MTFR1-PDE7A_cdna.fa
89 Bytes
MTFR1-65719535_PDE7A-65719339
MTFR1-PDE7A.exons.txt
102 Bytes
MTFR1-PDE7A.fusion_transcripts.txt
244 Bytes
MTFR1-PDE7A.protein_domains.txt
111 Bytes
MTFR1-PDE7A_cdna.fa
89 Bytes
NBPF3-21445219_EIF3H-116658980
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13.8 kB
ENST00000318249-ENST00000521861.png
12.5 kB
NBPF3-EIF3H.exons.txt
706 Bytes
NBPF3-EIF3H.fusion_transcripts.txt
258 Bytes
NBPF3-EIF3H.protein_domains.txt
213 Bytes
NBPF3-EIF3H_cdna.fa
4.1 kB
NBPF3-EIF3H_cds.fa
984 Bytes
NBPF3-EIF3H_protein.fa
474 Bytes
NFKBID-35897698_PTBP2-96822360
NFKBID-PTBP2.exons.txt
102 Bytes
NFKBID-PTBP2.fusion_transcripts.txt
245 Bytes
NFKBID-PTBP2.protein_domains.txt
111 Bytes
NFKBID-PTBP2_cdna.fa
89 Bytes
NR2F1-93583969_NR2F1-AS1-93563437
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492 Bytes
NR2F1-NR2F1-AS1.fusion_transcripts.txt
226 Bytes
NR2F1-NR2F1-AS1.protein_domains.txt
111 Bytes
NR2F1-NR2F1-AS1_cdna.fa
3.3 kB
NRCAM-108312665_PNPLA8-108515447
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1.0 kB
NRCAM-PNPLA8.fusion_transcripts.txt
228 Bytes
NRCAM-PNPLA8.protein_domains.txt
111 Bytes
NRCAM-PNPLA8_cdna.fa
3.6 kB
OGFOD1-56470790_BBS2-56470425
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102 Bytes
OGFOD1-BBS2.fusion_transcripts.txt
244 Bytes
OGFOD1-BBS2.protein_domains.txt
111 Bytes
OGFOD1-BBS2_cdna.fa
89 Bytes
PDE8B-77426598_WDR41-77426161
PDE8B-WDR41.exons.txt
102 Bytes
PDE8B-WDR41.fusion_transcripts.txt
244 Bytes
PDE8B-WDR41.protein_domains.txt
111 Bytes
PDE8B-WDR41_cdna.fa
89 Bytes
PHTF1-113758659_YARS-32787075
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13.5 kB
ENST00000369604-ENST00000373477.png
17.1 kB
PHTF1-YARS.exons.txt
767 Bytes
PHTF1-YARS.fusion_transcripts.txt
241 Bytes
PHTF1-YARS.protein_domains.txt
443 Bytes
PHTF1-YARS_cdna.fa
2.3 kB
PHTF1-YARS_cds.fa
1.0 kB
PHTF1-YARS_protein.fa
472 Bytes
PPM1B-44169274_KDM3A-86474776
PPM1B-KDM3A.exons.txt
1.3 kB
PPM1B-KDM3A.fusion_transcripts.txt
227 Bytes
PPM1B-KDM3A.protein_domains.txt
111 Bytes
PPM1B-KDM3A_cdna.fa
3.4 kB
PRAMENP-22026020_IGLC3-22906342
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410 Bytes
PRAMENP-IGLC3.fusion_transcripts.txt
230 Bytes
PRAMENP-IGLC3.protein_domains.txt
111 Bytes
PRAMENP-IGLC3_cdna.fa
1.2 kB
PRAMENP-22026038_IGLC3-22906387
PRAMENP-IGLC3.exons.txt
410 Bytes
PRAMENP-IGLC3.fusion_transcripts.txt
230 Bytes
PRAMENP-IGLC3.protein_domains.txt
111 Bytes
PRAMENP-IGLC3_cdna.fa
1.1 kB
PRAMENP-22026039_IGLC3-22906408
PRAMENP-IGLC3.exons.txt
410 Bytes
PRAMENP-IGLC3.fusion_transcripts.txt
230 Bytes
PRAMENP-IGLC3.protein_domains.txt
111 Bytes
PRAMENP-IGLC3_cdna.fa
1.1 kB
PRDX2-12799859_GBAS-55982210
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13.3 kB
ENST00000301522-ENST00000322090.png
16.7 kB
PRDX2-GBAS.exons.txt
911 Bytes
PRDX2-GBAS.fusion_transcripts.txt
258 Bytes
PRDX2-GBAS.protein_domains.txt
380 Bytes
PRDX2-GBAS_cdna.fa
2.4 kB
PRDX2-GBAS_cds.fa
1.1 kB
PRDX2-GBAS_protein.fa
506 Bytes
PSMA3-58267485_PSMA3-AS1-58267456
PSMA3-PSMA3-AS1.exons.txt
813 Bytes
PSMA3-PSMA3-AS1.fusion_transcripts.txt
228 Bytes
PSMA3-PSMA3-AS1.protein_domains.txt
111 Bytes
PSMA3-PSMA3-AS1_cdna.fa
2.9 kB
PSMA3-58267487_PSMA3-AS1-58267353
PSMA3-PSMA3-AS1.exons.txt
813 Bytes
PSMA3-PSMA3-AS1.fusion_transcripts.txt
226 Bytes
PSMA3-PSMA3-AS1.protein_domains.txt
111 Bytes
PSMA3-PSMA3-AS1_cdna.fa
2.9 kB
PSMA3-58267487_PSMA3-AS1-58267371
PSMA3-PSMA3-AS1.exons.txt
813 Bytes
PSMA3-PSMA3-AS1.fusion_transcripts.txt
226 Bytes
PSMA3-PSMA3-AS1.protein_domains.txt
111 Bytes
PSMA3-PSMA3-AS1_cdna.fa
2.9 kB
PSMA3-58267522_PSMA3-AS1-58267345
PSMA3-PSMA3-AS1.exons.txt
813 Bytes
PSMA3-PSMA3-AS1.fusion_transcripts.txt
228 Bytes
PSMA3-PSMA3-AS1.protein_domains.txt
111 Bytes
PSMA3-PSMA3-AS1_cdna.fa
2.9 kB
PSMA3-58267641_PSMA3-AS1-58267011
PSMA3-PSMA3-AS1.exons.txt
813 Bytes
PSMA3-PSMA3-AS1.fusion_transcripts.txt
228 Bytes
PSMA3-PSMA3-AS1.protein_domains.txt
111 Bytes
PSMA3-PSMA3-AS1_cdna.fa
2.6 kB
PSMA3-58267681_PSMA3-AS1-58267357
PSMA3-PSMA3-AS1.exons.txt
813 Bytes
PSMA3-PSMA3-AS1.fusion_transcripts.txt
228 Bytes
PSMA3-PSMA3-AS1.protein_domains.txt
111 Bytes
PSMA3-PSMA3-AS1_cdna.fa
2.9 kB
PSTK-122994886_IKZF5-122994627
PSTK-IKZF5.exons.txt
102 Bytes
PSTK-IKZF5.fusion_transcripts.txt
243 Bytes
PSTK-IKZF5.protein_domains.txt
111 Bytes
PSTK-IKZF5_cdna.fa
89 Bytes
PTS-112237506_RP11-356J5.12-112360069
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102 Bytes
PTS-RP11-356J5.12.fusion_transcripts.txt
243 Bytes
PTS-RP11-356J5.12.protein_domains.txt
111 Bytes
PTS-RP11-356J5.12_cdna.fa
89 Bytes
RNF13-149921227_RP11-167H9.4-150084332
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102 Bytes
RNF13-RP11-167H9.4.fusion_transcripts.txt
246 Bytes
RNF13-RP11-167H9.4.protein_domains.txt
111 Bytes
RNF13-RP11-167H9.4_cdna.fa
89 Bytes
RP11-114G22.1-23057897_RARS2-87524652
RP11-114G22.1-RARS2.exons.txt
1.6 kB
RP11-114G22.1-RARS2.fusion_transcripts.txt
228 Bytes
RP11-114G22.1-RARS2.protein_domains.txt
111 Bytes
RP11-114G22.1-RARS2_cdna.fa
2.3 kB
RP11-120D5.1-11038603_MID1-10567603
RP11-120D5.1-MID1.exons.txt
983 Bytes
RP11-120D5.1-MID1.fusion_transcripts.txt
228 Bytes
RP11-120D5.1-MID1.protein_domains.txt
111 Bytes
RP11-120D5.1-MID1_cdna.fa
6.7 kB
RP11-156P1.3-47021582_RANBP9-13644729
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1.2 kB
RP11-156P1.3-RANBP9.fusion_transcripts.txt
228 Bytes
RP11-156P1.3-RANBP9.protein_domains.txt
111 Bytes
RP11-156P1.3-RANBP9_cdna.fa
3.0 kB
RP11-282O18.3-123260274_CDK2AP1-123261803
RP11-282O18.3-CDK2AP1.exons.txt
450 Bytes
RP11-282O18.3-CDK2AP1.fusion_transcripts.txt
232 Bytes
RP11-282O18.3-CDK2AP1.protein_domains.txt
111 Bytes
RP11-282O18.3-CDK2AP1_cdna.fa
1.8 kB
RP11-308D16.2-136925379_LCA5-79493750
RP11-308D16.2-LCA5.exons.txt
756 Bytes
RP11-308D16.2-LCA5.fusion_transcripts.txt
240 Bytes
RP11-308D16.2-LCA5.protein_domains.txt
111 Bytes
RP11-308D16.2-LCA5_cdna.fa
5.7 kB
RP11-465C12.1-71858621_CASC17-71185655
RP11-465C12.1-CASC17.exons.txt
690 Bytes
RP11-465C12.1-CASC17.fusion_transcripts.txt
222 Bytes
RP11-465C12.1-CASC17.protein_domains.txt
111 Bytes
RP11-465C12.1-CASC17_cdna.fa
2.6 kB
RP11-728F11.4-117838639_FXYD6-117838386
RP11-728F11.4-FXYD6.exons.txt
102 Bytes
RP11-728F11.4-FXYD6.fusion_transcripts.txt
247 Bytes
RP11-728F11.4-FXYD6.protein_domains.txt
111 Bytes
RP11-728F11.4-FXYD6_cdna.fa
89 Bytes
RP11-739G5.1-93760757_SNX1-64112573
RP11-739G5.1-SNX1.exons.txt
1.6 kB
RP11-739G5.1-SNX1.fusion_transcripts.txt
226 Bytes
RP11-739G5.1-SNX1.protein_domains.txt
111 Bytes
RP11-739G5.1-SNX1_cdna.fa
3.9 kB
RP5-857K21.4-631103_RCAN3-24539373
RP5-857K21.4-RCAN3.exons.txt
102 Bytes
RP5-857K21.4-RCAN3.fusion_transcripts.txt
244 Bytes
RP5-857K21.4-RCAN3.protein_domains.txt
111 Bytes
RP5-857K21.4-RCAN3_cdna.fa
89 Bytes
RPP40-5003885_RP11-428J1.5-5042592
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260 Bytes
RPP40-RP11-428J1.5.fusion_transcripts.txt
227 Bytes
RPP40-RP11-428J1.5.protein_domains.txt
111 Bytes
RPP40-RP11-428J1.5_cdna.fa
1.2 kB
S100PBP-32817085_YARS-32817327
S100PBP-YARS.exons.txt
102 Bytes
S100PBP-YARS.fusion_transcripts.txt
245 Bytes
S100PBP-YARS.protein_domains.txt
111 Bytes
S100PBP-YARS_cdna.fa
89 Bytes
SAAL1-18086866_HNRNPC-21263336
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14.3 kB
ENST00000524803-ENST00000554455.png
12.2 kB
SAAL1-HNRNPC.exons.txt
1.4 kB
SAAL1-HNRNPC.fusion_transcripts.txt
247 Bytes
SAAL1-HNRNPC.protein_domains.txt
111 Bytes
SAAL1-HNRNPC_cdna.fa
2.9 kB
SAAL1-HNRNPC_cds.fa
2.1 kB
SAAL1-HNRNPC_protein.fa
542 Bytes
SAAL1-18086868_HNRNPC-21263338
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14.4 kB
ENST00000524803-ENST00000554455.png
12.4 kB
SAAL1-HNRNPC.exons.txt
1.4 kB
SAAL1-HNRNPC.fusion_transcripts.txt
248 Bytes
SAAL1-HNRNPC.protein_domains.txt
111 Bytes
SAAL1-HNRNPC_cdna.fa
2.9 kB
SAAL1-HNRNPC_cds.fa
2.1 kB
SAAL1-HNRNPC_protein.fa
525 Bytes
SCYL3-169854556_C1orf112-169854001
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13.9 kB
ENST00000367772-ENST00000286031.png
13.5 kB
SCYL3-C1orf112.exons.txt
1.2 kB
SCYL3-C1orf112.fusion_transcripts.txt
249 Bytes
SCYL3-C1orf112.protein_domains.txt
203 Bytes
SCYL3-C1orf112_cdna.fa
2.3 kB
SCYL3-C1orf112_cds.fa
2.0 kB
SCYL3-C1orf112_protein.fa
797 Bytes
SCYL3-169854686_C1orf112-169853923
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13.9 kB
ENST00000367772-ENST00000286031.png
13.5 kB
SCYL3-C1orf112.exons.txt
1.2 kB
SCYL3-C1orf112.fusion_transcripts.txt
249 Bytes
SCYL3-C1orf112.protein_domains.txt
203 Bytes
SCYL3-C1orf112_cdna.fa
2.3 kB
SCYL3-C1orf112_cds.fa
1.9 kB
SCYL3-C1orf112_protein.fa
753 Bytes
SMG1-18815175_PHF20-35801491
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15.3 kB
ENST00000446231-ENST00000374012.png
15.5 kB
SMG1-PHF20.exons.txt
5.9 kB
SMG1-PHF20.fusion_transcripts.txt
246 Bytes
SMG1-PHF20.protein_domains.txt
327 Bytes
SMG1-PHF20_cdna.fa
17.3 kB
SMG1-PHF20_cds.fa
14.0 kB
SMG1-PHF20_protein.fa
3.8 kB
SNRPB2-16740974_METTL18-169793700
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13.7 kB
ENST00000246071-ENST00000310392.png
12.8 kB
SNRPB2-METTL18.exons.txt
727 Bytes
SNRPB2-METTL18.fusion_transcripts.txt
250 Bytes
SNRPB2-METTL18.protein_domains.txt
358 Bytes
SNRPB2-METTL18_cdna.fa
2.2 kB
SNRPB2-METTL18_cds.fa
1.9 kB
SNRPB2-METTL18_protein.fa
380 Bytes
SOX2-OT-181175583_TMCC1-129880559
SOX2-OT-TMCC1.exons.txt
102 Bytes
SOX2-OT-TMCC1.fusion_transcripts.txt
249 Bytes
SOX2-OT-TMCC1.protein_domains.txt
111 Bytes
SOX2-OT-TMCC1_cdna.fa
89 Bytes
TAOK3-118233674_MARCH1-163545743
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15.1 kB
ENST00000392533-ENST00000503008.png
13.9 kB
TAOK3-MARCH1.exons.txt
958 Bytes
TAOK3-MARCH1.fusion_transcripts.txt
247 Bytes
TAOK3-MARCH1.protein_domains.txt
201 Bytes
TAOK3-MARCH1_cdna.fa
5.8 kB
TAOK3-MARCH1_cds.fa
1.2 kB
TAOK3-MARCH1_protein.fa
384 Bytes
TIMP3-32859242_RP11-244H3.4-34985252
ENST00000266085-ENST00000487874.exon.png
14.0 kB
ENST00000266085-ENST00000487874.png
12.8 kB
TIMP3-RP11-244H3.4.exons.txt
676 Bytes
TIMP3-RP11-244H3.4.fusion_transcripts.txt
262 Bytes
TIMP3-RP11-244H3.4.protein_domains.txt
220 Bytes
TIMP3-RP11-244H3.4_cdna.fa
1.7 kB
TIMP3-RP11-244H3.4_cds.fa
608 Bytes
TIMP3-RP11-244H3.4_protein.fa
340 Bytes
TIMP3-32859242_TMEM35B-34985252
ENST00000266085-ENST00000373337.exon.png
14.1 kB
ENST00000266085-ENST00000373337.png
12.9 kB
TIMP3-TMEM35B.exons.txt
715 Bytes
TIMP3-TMEM35B.fusion_transcripts.txt
249 Bytes
TIMP3-TMEM35B.protein_domains.txt
215 Bytes
TIMP3-TMEM35B_cdna.fa
1.8 kB
TIMP3-TMEM35B_cds.fa
996 Bytes
TIMP3-TMEM35B_protein.fa
356 Bytes
TIMP3-32859757_COL3A1-189010800
ENST00000266085-ENST00000304636.exon.png
14.0 kB
ENST00000266085-ENST00000304636.png
12.6 kB
TIMP3-COL3A1.exons.txt
638 Bytes
TIMP3-COL3A1.fusion_transcripts.txt
247 Bytes
TIMP3-COL3A1.protein_domains.txt
214 Bytes
TIMP3-COL3A1_cdna.fa
2.7 kB
TIMP3-COL3A1_cds.fa
952 Bytes
TIMP3-COL3A1_protein.fa
380 Bytes
TMEM161B-88202962_ELP2-36154850
ENST00000514135-ENST00000442325.exon.png
14.1 kB
ENST00000514135-ENST00000442325.png
16.7 kB
TMEM161B-ELP2.exons.txt
1.6 kB
TMEM161B-ELP2.fusion_transcripts.txt
249 Bytes
TMEM161B-ELP2.protein_domains.txt
581 Bytes
TMEM161B-ELP2_cdna.fa
2.5 kB
TMEM161B-ELP2_cds.fa
2.4 kB
TMEM161B-ELP2_protein.fa
488 Bytes
TPM3-154182988_GATAD2B-153828348
ENST00000368530-ENST00000368655.exon.png
14.8 kB
ENST00000368530-ENST00000368655.png
16.8 kB
TPM3-GATAD2B.exons.txt
1.0 kB
TPM3-GATAD2B.fusion_transcripts.txt
243 Bytes
TPM3-GATAD2B.protein_domains.txt
407 Bytes
TPM3-GATAD2B_cdna.fa
7.9 kB
TPM3-GATAD2B_cds.fa
2.1 kB
TPM3-GATAD2B_protein.fa
839 Bytes
TRAPPC9-139988726_NUP50-45178238
ENST00000389328-ENST00000347635.exon.png
14.7 kB
ENST00000389328-ENST00000347635.png
15.7 kB
TRAPPC9-NUP50.exons.txt
1.9 kB
TRAPPC9-NUP50.fusion_transcripts.txt
250 Bytes
TRAPPC9-NUP50.protein_domains.txt
529 Bytes
TRAPPC9-NUP50_cdna.fa
7.8 kB
TRAPPC9-NUP50_cds.fa
4.3 kB
TRAPPC9-NUP50_protein.fa
1.2 kB
TTC26-139148377_NDUFV2-9117838
ENST00000464848-ENST00000318388.exon.png
14.0 kB
ENST00000464848-ENST00000318388.png
16.2 kB
TTC26-NDUFV2.exons.txt
1.2 kB
TTC26-NDUFV2.fusion_transcripts.txt
244 Bytes
TTC26-NDUFV2.protein_domains.txt
341 Bytes
TTC26-NDUFV2_cdna.fa
1.7 kB
TTC26-NDUFV2_cds.fa
1.5 kB
TTC26-NDUFV2_protein.fa
632 Bytes
TTC26-139148377_RP11-21J18.1-9117838
TTC26-RP11-21J18.1.exons.txt
1.3 kB
TTC26-RP11-21J18.1.fusion_transcripts.txt
240 Bytes
TTC26-RP11-21J18.1.protein_domains.txt
111 Bytes
TTC26-RP11-21J18.1_cdna.fa
1.9 kB
TTC39B-15187971_C6orf62-24708911
ENST00000512701-ENST00000378119.exon.png
15.0 kB
ENST00000512701-ENST00000378119.png
15.6 kB
TTC39B-C6orf62.exons.txt
1.3 kB
TTC39B-C6orf62.fusion_transcripts.txt
245 Bytes
TTC39B-C6orf62.protein_domains.txt
328 Bytes
TTC39B-C6orf62_cdna.fa
3.1 kB
TTC39B-C6orf62_cds.fa
1.8 kB
TTC39B-C6orf62_protein.fa
716 Bytes
TUB-8094114_RIC3-8107370
TUB-RIC3.exons.txt
102 Bytes
TUB-RIC3.fusion_transcripts.txt
241 Bytes
TUB-RIC3.protein_domains.txt
111 Bytes
TUB-RIC3_cdna.fa
89 Bytes
TUB-8094123_RIC3-8110740
ENST00000305253-ENST00000309737.exon.png
13.0 kB
ENST00000305253-ENST00000309737.png
12.1 kB
TUB-RIC3.exons.txt
522 Bytes
TUB-RIC3.fusion_transcripts.txt
244 Bytes
TUB-RIC3.protein_domains.txt
190 Bytes
TUB-RIC3_cdna.fa
2.7 kB
TUB-RIC3_cds.fa
610 Bytes
TUB-RIC3_protein.fa
326 Bytes
WHSC1L1-38347497_ESRP1-94705925
ENST00000317025-ENST00000433389.exon.png
13.9 kB
ENST00000317025-ENST00000433389.png
12.0 kB
WHSC1L1-ESRP1.exons.txt
331 Bytes
WHSC1L1-ESRP1.fusion_transcripts.txt
245 Bytes
WHSC1L1-ESRP1.protein_domains.txt
111 Bytes
WHSC1L1-ESRP1_cdna.fa
2.9 kB
WHSC1L1-ESRP1_cds.fa
757 Bytes
WHSC1L1-ESRP1_protein.fa
384 Bytes
YPEL1-21700976_CPPED1-12665115
ENST00000339468-ENST00000381774.exon.png
13.8 kB
ENST00000339468-ENST00000381774.png
13.7 kB
YPEL1-CPPED1.exons.txt
558 Bytes
YPEL1-CPPED1.fusion_transcripts.txt
248 Bytes
YPEL1-CPPED1.protein_domains.txt
244 Bytes
YPEL1-CPPED1_cdna.fa
6.4 kB
YPEL1-CPPED1_cds.fa
663 Bytes
YPEL1-CPPED1_protein.fa
336 Bytes
ZC3H11A-203833853_KLHL12-202911203
ENST00000545588-ENST00000367261.exon.png
14.4 kB
ENST00000545588-ENST00000367261.png
13.6 kB
ZC3H11A-KLHL12.exons.txt
1.4 kB
ZC3H11A-KLHL12.fusion_transcripts.txt
249 Bytes
ZC3H11A-KLHL12.protein_domains.txt
212 Bytes
ZC3H11A-KLHL12_cdna.fa
7.5 kB
ZC3H11A-KLHL12_cds.fa
2.1 kB
ZC3H11A-KLHL12_protein.fa
458 Bytes
ZFP69B-40463329_TOP2A-40400037
ENST00000411995-ENST00000423485.exon.png
14.9 kB
ENST00000411995-ENST00000423485.png
16.8 kB
ZFP69B-TOP2A.exons.txt
1.5 kB
ZFP69B-TOP2A.fusion_transcripts.txt
248 Bytes
ZFP69B-TOP2A.protein_domains.txt
445 Bytes
ZFP69B-TOP2A_cdna.fa
4.5 kB
ZFP69B-TOP2A_cds.fa
3.0 kB
ZFP69B-TOP2A_protein.fa
614 Bytes
ZNF197-44586213_CSNK2A1-508660
ZNF197-CSNK2A1.exons.txt
102 Bytes
ZNF197-CSNK2A1.fusion_transcripts.txt
247 Bytes
ZNF197-CSNK2A1.protein_domains.txt
111 Bytes
ZNF197-CSNK2A1_cdna.fa
89 Bytes
ZNF451-57154047_EIF5B-99360236
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14.3 kB
ENST00000370706-ENST00000289371.png
11.8 kB
ZNF451-EIF5B.exons.txt
2.8 kB
ZNF451-EIF5B.fusion_transcripts.txt
249 Bytes
ZNF451-EIF5B.protein_domains.txt
111 Bytes
ZNF451-EIF5B_cdna.fa
9.1 kB
ZNF451-EIF5B_cds.fa
6.9 kB
ZNF451-EIF5B_protein.fa
1.2 kB
ZNF660-44586213_CSNK2A1-508660
ZNF660-CSNK2A1.exons.txt
1.1 kB
ZNF660-CSNK2A1.fusion_transcripts.txt
230 Bytes
ZNF660-CSNK2A1.protein_domains.txt
111 Bytes
ZNF660-CSNK2A1_cdna.fa
4.5 kB
agfusion_results
MHC_Class_I
10
Test.all_epitopes.final.tsv
418.2 kB
Test.all_epitopes.tsv
308.1 kB
Test.fa
3.9 kB
Test.fa.tsv
34.8 kB
tmp
Test.10.fa
3.3 kB
Test.10.fa.split_1-44
922 Bytes
Test.10.fa.split_1-44.key
2.6 kB
Test.BigMHC_EL.HLA-A*02:01.10.tsv_1-44
20.6 kB
Test.BigMHC_EL.HLA-B*35:01.10.tsv_1-44
20.7 kB
Test.BigMHC_IM.HLA-A*02:01.10.tsv_1-44
19.8 kB
Test.BigMHC_IM.HLA-B*35:01.10.tsv_1-44
20.0 kB
Test.DeepImmuno.HLA-A*02:01.10.tsv_1-44
17.2 kB
Test.DeepImmuno.HLA-B*35:01.10.tsv_1-44
17.1 kB
Test.HLA-A*02:01.10.parsed.tsv_1-44
154.7 kB
Test.HLA-B*35:01.10.parsed.tsv_1-44
155.0 kB
Test.MHCflurry.HLA-A*02:01.10.tsv_1-44
53.4 kB
Test.MHCflurry.HLA-B*35:01.10.tsv_1-44
53.8 kB