Published January 5, 2025
| Version v2
Dataset
Open
The single-cell spatial landscape of stage III colorectal cancers
Description
We added H&E images with pathologist annotations in this version (v2). All other files are available in version 1.
The Seurat and Scanpy objects for single-cell data, along with a CSV file containing coordinates and cell types for all single cells, have been deposited. Additionally, the original IMC image data has also been uploaded.
The Seurat object is: 20220215_COAD_cancer_control_umapped_annotated.rds
The Scanpy object is: 20220215_COAD_cancer_control_umapped_annotated.h5ad
Files
H&E_annotations.zip
Files
(3.8 MB)
| Name | Size | Download all |
|---|---|---|
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md5:218107179a0a4a11d8dc2abb9d4a5c64
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3.8 MB | Preview Download |