.FILE NUMBERS: 1-5,8,20-230
.FIRST AND LAST RING: 5,15
[Only rings 5 to 15 will be analyzed]
.SKIP: 1
[If skip=0 or 1, then each ring between 5 and 15 will be taken;
for skip=2 every second ring, etc.]
.FULL OR HALF: H
[Full - full ring treated (real data); Half - half ring
treated (autocorrelation function).]
.NORMALIZE UNDER THE MASK (Y/N): Y
[For Y, input rings are normalized to compensate for the negative
stain effect.]
.NUMBER OF GROUPS, NUMBER OF ITERATIONS: 5,30
[Number of groups the images will be divided into and upper limit of
iterations permitted (to avoid infinite loop in the case of lack of
convergence)]
.DOCUMENT FILE NAME: HALDOC
[This is the only output produced by this program. It contains
4 columns:
1.File number 2.Rota. angle 3.Distance 4.Group number Real number Note that From the Results of to handle sign of angle total classification. gaps in file should NOT be average. series. reversed in forma. of average. ]
NOTES