Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol

Menaquinone biosynthesis, modified futalosine pathway

Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol

Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol

Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol

C5 isoprenoid biosynthesis, mevalonate pathway

C5 isoprenoid biosynthesis, mevalonate pathway, archaea

C5 isoprenoid biosynthesis, non-mevalonate pathway

C10-C20 isoprenoid biosynthesis, non-plant eukaryotes

beta-Carotene biosynthesis, GGAP => beta-carotene

Abscisic acid biosynthesis, beta-carotene => abscisic acid

Castasterone biosynthesis, campesterol => castasterone

Gibberellin A12 biosynthesis, GAPP => GA12

Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1

Gibberellin A1 biosynthesis, GGPP => GA1

Tylosin biosynthesis, methylmalonyl-CoA + malonyl-CoA => tylactone => tylosin

Mycinamicin biosynthesis, malonyl-CoA + methylmalonyl-CoA => protomycinolide IV => mycinamicin II

Erythromycin biosynthesis, propanoyl-CoA + methylmalonyl-CoA => deoxyerythronolide B => erythromycin A/B

Oleandomycin biosynthesis, malonyl-CoA + methylmalonyl-CoA => 8,8a-deoxyoleandolide => oleandomycin

Pikromycin/methymycin biosynthesis, methylmalonyl-CoA + malonyl-CoA => narbonolide/10-deoxymethynolide => pikromycin/methymycin

Avermectin biosynthesis, 2-methylbutanoyl-CoA/isobutyryl-CoA => 6,8a-Seco-6,8a-deoxy-5-oxoavermectin 1a/1b aglycone => avermectin A1a/B1a/A1b/B1b

9-membered enediyne core biosynthesis, malonyl-CoA => 3-hydroxyhexadeca-4,6,8,10,12,14-hexaenoyl-ACP => 9-membered enediyne core

10-membered enediyne core biosynthesis, malonyl-CoA => 3-hydroxyhexadeca-4,6,8,10,12,14-hexaenoyl-ACP => 10-membered enediyne core

C-1027 benzoxazolinate moiety biosynthesis, chorismate => benzoxazolinyl-CoA

C-1027 beta-amino acid moiety biosynthesis, tyrosine => 3-chloro-4,5-dihydroxy-beta-phenylalanyl-PCP

Maduropeptin beta-hydroxy acid moiety biosynthesis, tyrosine => 3-(4-hydroxyphenyl)-3-oxopropanoyl-PCP